Prupe.4G148800_v2.0.a1

Interactor of constitutive active ROPs

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
8493164 .. 8496669
3506 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G148800.4

Sequence Viewer

Length: 1155 bp
ATGCCGCGATCAAGGGGCTCCGAAATGGTTCAGAGGCCGTCTCCTCGAGGAGCACATCAGCTCAGGACTTCAAGCTCTGATTCAGATCCACTCCATCATCGACCAATCACTGACCGAAGTCCAAAGCTAGGAGATCGTCGTTCCCCAAGAGGTTCACAATCTGATCCACTAAATCAAAAGAAGCTTGGAACCCGCCTTGCTGATTTAGAATCACAACTTGGGCAAGCACAAGAAGAGCTAAGGATTTTGAAAGAGCAGTTGGCTTCAGCTGAGGCTGCAAAGAAAGAAGCCCAAGAGAAACTGGAAAAGAAAATTAAGAAACCAGTTGTGACTTCAGAGCCAGTGAAAATCCATGAAACGCATCCCTCATTGGAGATTCAAGATTCTAACAAAACAGACAGTTGTACCTCTGAGGAAGTTCCAGATGACTGCCAAAGGGAAACTGATGTTTTCGAAGTCCCTGTGGAACACGTCACAGTTGAGCCCAAGGTTGAACCTAGTGAGACTGATCAAGTGGAAGAAGAAACCAAACCAGTTGATATATCAGCTGAACCACCATCAGTTATGGAACCAGAGAAACTGCTCTTACATGACCTGGCTTTGAAGAATGATGAGATAAACATGCTAAGAGCTGAGTTGGAAGAGAAGGCAAAGGAGCTAGAGGTGTTTGGTCAAGAAAATGAGGGTTTGAAAAATCAGCTGAATGAGGCAGCTTTAAATTTCTCATCTGCACAGGCAAAGGACAAGGAAATGACCTTGAAGTTAAGCCAGCTTGAAGAAGAGCTGGAAGCAAGTAAGGCCAGTGCAGGCCAGTTGAATGAGAAGCTGCAAGCAATGGAAGGAGCAAAGGAAGCAAAGGAAGCAATGGACGCTGAGATGAAGAAGATGAGAATACAGACAGAGCAGTGGAGAAAGGCAGCAGATGCTGCTGCAGCAGTACTTTCGGGGGGTATGGAGATGAATGGGAGGATTTCTGAGAGGTGTGGCTCCATGGATAAGCACTTTGGTGGAGTGTTTGAGCCACCAGCTGGTGGCTATGCTGGCTTTGTTGGGTCACCTGCTGATGATTTGGATGATGGATTTGGTAGTGGGAAACGAAAGGGTTCCGGGATAAAAATGTTTGGTGACTTATGGAAAAAGAAGGGCCAGAGATAG

Protein Analysis

385

Amino Acids

42.4

Weight (kDa)

5.19

Isoelectric Point (pI)

49.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1066
AbsI CCTCGAGG 1 cut(s) 45
Acc36I ACCTGC 1 cut(s) 1066
AccB7I CCANNNNNTGG 2 cut(s) 1028, 1031
AccII CGCG 1 cut(s) 7
AciI CCGC 2 cut(s) 5, 193
AclWI GGATC 2 cut(s) 80, 158
AcsI RAATTY 1 cut(s) 718
AcuI CTGAAG 2 cut(s) 249, 318
AfaI GTAC 2 cut(s) 406, 939
AfiI CCNNNNNNNGG 3 cut(s) 128, 1028, 1031
AflIII ACRYGT 1 cut(s) 469
AgsI TTSAA 9 cut(s) 72, 250, 380, 494, 604, 691, 760, 776, 817
AjiI CACGTC 1 cut(s) 472
AjnI CCWGG 1 cut(s) 594
AjuI GAANNNNNNNTTGG 4 cut(s) 201, 233, 242, 274
AleI CACNNNNGTG 1 cut(s) 1005
Alw21I GWGCWC 1 cut(s) 55
Alw26I GTCTC 2 cut(s) 45, 497
AlwI GGATC 2 cut(s) 80, 158
AlwNI CAGNNNCTG 1 cut(s) 926
Ama87I CYCGRG 1 cut(s) 45
AoxI GGCC 4 cut(s) 35, 798, 808, 1144
ApeKI GCWGC 7 cut(s) 275, 710, 826, 917, 926, 929, 932
ApoI RAATTY 1 cut(s) 718
Asp700I GAANNNNTTC 2 cut(s) 27, 1102
AspS9I GGNCC 1 cut(s) 1144
AsuC2I CCSGG 1 cut(s) 1108
AsuHPI GGTGA 2 cut(s) 1047, 1136
AsuII TTCGAA 1 cut(s) 453
AvaI CYCGRG 1 cut(s) 45
BaeI ACNNNNGTAYC 2 cut(s) 388, 421
BanII GRGCYC 2 cut(s) 20, 486
Bbv12I GWGCWC 1 cut(s) 55
BbvCI CCTCAGC 1 cut(s) 270
BbvI GCAGC 7 cut(s) 262, 722, 813, 913, 916, 929, 944
BccI CCATC 3 cut(s) 102, 565, 1070
BceAI ACGGC 1 cut(s) 22
BcgI CGANNNNNNTGC 2 cut(s) 924, 958
BciT130I CCWGG 1 cut(s) 596
BclI TGATCA 1 cut(s) 508
BcnI CCSGG 1 cut(s) 1108
BcoDI GTCTC 2 cut(s) 45, 497
BfaI CTAG 3 cut(s) 128, 498, 659
BfmI CTRYAG 1 cut(s) 930
BfuAI ACCTGC 1 cut(s) 1066
BisI GCNGC 8 cut(s) 5, 276, 711, 827, 918, 927, 930, 933
BlsI GCNGC 8 cut(s) 6, 277, 712, 828, 919, 928, 931, 934
BmcAI AGTACT 1 cut(s) 939
Bme1390I CCNGG 2 cut(s) 596, 1108
BmeT110I CYCGRG 1 cut(s) 45
BmgBI CACGTC 1 cut(s) 472
BmgT120I GGNCC 1 cut(s) 1144
BmiI GGNNCC 5 cut(s) 19, 190, 570, 988, 1105
BmrFI CCNGG 2 cut(s) 596, 1108
BmsI GCATC 2 cut(s) 370, 913
BoxI GACNNNNGTC 1 cut(s) 117
BplI GAGNNNNNCTC 2 cut(s) 25, 57
Bpu10I CCTNAGC 3 cut(s) 62, 239, 270
Bpu14I TTCGAA 1 cut(s) 453
BpuMI CCSGG 1 cut(s) 1108
BsaBI GATNNNNATC 1 cut(s) 84
BsaJI CCNNGG 2 cut(s) 486, 990
Bsc4I CCNNNNNNNGG 3 cut(s) 128, 1028, 1031
Bse1I ACTGG 6 cut(s) 306, 323, 341, 533, 801, 811
Bse3DI GCAATG 2 cut(s) 840, 870
Bse8I GATNNNNATC 1 cut(s) 84
BseBI CCWGG 1 cut(s) 596
BseDI CCNNGG 2 cut(s) 486, 990
BseGI GGATG 2 cut(s) 361, 1078
BseJI GATNNNNATC 1 cut(s) 84
BseLI CCNNNNNNNGG 3 cut(s) 128, 1028, 1031
BseMI GCAATG 2 cut(s) 840, 870
BseMII CTCAG 6 cut(s) 76, 261, 402, 624, 864, 966
BseNI ACTGG 6 cut(s) 306, 323, 341, 533, 801, 811
BseRI GAGGAG 2 cut(s) 33, 63
BseXI GCAGC 7 cut(s) 262, 722, 813, 913, 916, 929, 944
BsgI GTGCAG 2 cut(s) 714, 825
Bsh1236I CGCG 1 cut(s) 7
BshFI GGCC 4 cut(s) 37, 800, 810, 1146
BsiHKAI GWGCWC 1 cut(s) 55
BsiHKCI CYCGRG 1 cut(s) 45
BsiSI CCGG 1 cut(s) 1107
BslFI GGGAC 1 cut(s) 443
BslI CCNNNNNNNGG 3 cut(s) 128, 1028, 1031
BsmAI GTCTC 2 cut(s) 45, 497
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 1 cut(s) 443
BsnI GGCC 4 cut(s) 37, 800, 810, 1146
BsoBI CYCGRG 1 cut(s) 45
Bsp119I TTCGAA 1 cut(s) 453
Bsp1286I GDGCHC 3 cut(s) 20, 55, 486
Bsp143I GATC 5 cut(s) 8, 85, 133, 163, 508
Bsp19I CCATGG 1 cut(s) 990
BspACI CCGC 2 cut(s) 5, 193
BspANI GGCC 4 cut(s) 37, 800, 810, 1146
BspCNI CTCAG 6 cut(s) 75, 262, 403, 625, 865, 967
BspFNI CGCG 1 cut(s) 7
BspLI GGNNCC 5 cut(s) 19, 190, 570, 988, 1105
BspMAI CTGCAG 1 cut(s) 934
BspMI ACCTGC 1 cut(s) 1066
BspPI GGATC 2 cut(s) 80, 158
BspQI GCTCTTC 2 cut(s) 228, 774
BspT104I TTCGAA 1 cut(s) 453
BsrDI GCAATG 2 cut(s) 840, 870
BsrI ACTGG 6 cut(s) 306, 323, 341, 533, 801, 811
BssECI CCNNGG 2 cut(s) 486, 990
BssMI GATC 5 cut(s) 8, 85, 133, 163, 508
BssT1I CCWWGG 2 cut(s) 486, 990
Bst2UI CCWGG 1 cut(s) 596
Bst4CI ACNGT 2 cut(s) 401, 478
Bst6I CTCTTC 3 cut(s) 228, 636, 774
BstAPI GCANNNNNTGC 2 cut(s) 923, 926
BstBI TTCGAA 1 cut(s) 453
BstC8I GCNNGC 5 cut(s) 225, 770, 808, 831, 1042
BstDEI CTNAG 8 cut(s) 62, 239, 270, 411, 626, 633, 873, 975
BstDSI CCRYGG 1 cut(s) 990
BstEII GGTNACC 1 cut(s) 1053
BstF5I GGATG 2 cut(s) 361, 1078
BstFNI CGCG 1 cut(s) 7
BstKTI GATC 5 cut(s) 11, 88, 136, 166, 511
BstMAI GTCTC 2 cut(s) 45, 497
BstMBI GATC 5 cut(s) 8, 85, 133, 163, 508
BstMWI GCNNNNNNNGC 9 cut(s) 275, 797, 851, 860, 869, 923, 926, 932, 1041
BstNI CCWGG 1 cut(s) 596
BstNSI RCATGY 1 cut(s) 625
BstPAI GACNNNNGTC 1 cut(s) 117
BstPI GGTNACC 1 cut(s) 1053
BstSCI CCNGG 2 cut(s) 594, 1106
BstSFI CTRYAG 1 cut(s) 930
BstUI CGCG 1 cut(s) 7
BstV1I GCAGC 7 cut(s) 262, 722, 813, 913, 916, 929, 944
BstX2I RGATCY 1 cut(s) 85
BstYI RGATCY 1 cut(s) 85
BsuRI GGCC 4 cut(s) 37, 800, 810, 1146
BtgI CCRYGG 1 cut(s) 990
BtrI CACGTC 1 cut(s) 472
BtsCI GGATG 2 cut(s) 361, 1078
BtsI GCAGTG 1 cut(s) 911
BtsIMutI CAGTG 4 cut(s) 108, 348, 808, 911
BveI ACCTGC 1 cut(s) 1066
Cac8I GCNNGC 5 cut(s) 225, 770, 808, 831, 1042
CaiI CAGNNNCTG 1 cut(s) 926
Cfr13I GGNCC 1 cut(s) 1144
CseI GACGC 1 cut(s) 878
Csp6I GTAC 2 cut(s) 405, 938
CviAII CATG 4 cut(s) 353, 590, 622, 991
CviQI GTAC 2 cut(s) 405, 938
DdeI CTNAG 8 cut(s) 62, 239, 270, 411, 626, 633, 873, 975
DpnI GATC 5 cut(s) 10, 87, 135, 165, 510
DpnII GATC 5 cut(s) 8, 85, 133, 163, 508
DraI TTTAAA 1 cut(s) 717
Eam1104I CTCTTC 3 cut(s) 228, 636, 774
EarI CTCTTC 3 cut(s) 228, 636, 774
Eco130I CCWWGG 2 cut(s) 486, 990
Eco24I GRGCYC 2 cut(s) 20, 486
Eco57I CTGAAG 2 cut(s) 249, 318
Eco88I CYCGRG 1 cut(s) 45
Eco91I GGTNACC 1 cut(s) 1053
EcoO65I GGTNACC 1 cut(s) 1053
EcoRII CCWGG 1 cut(s) 594
EcoT14I CCWWGG 2 cut(s) 486, 990
EcoT38I GRGCYC 2 cut(s) 20, 486
ErhI CCWWGG 2 cut(s) 486, 990
Esp3I CGTCTC 1 cut(s) 45
FaeI CATG 4 cut(s) 356, 593, 625, 994
FaiI YATR 9 cut(s) 354, 542, 566, 591, 623, 953, 992, 1038, 1132
FaqI GGGAC 1 cut(s) 443
FatI CATG 4 cut(s) 352, 589, 621, 990
FauI CCCGC 1 cut(s) 200
FbaI TGATCA 1 cut(s) 508
Fnu4HI GCNGC 8 cut(s) 5, 276, 711, 827, 918, 927, 930, 933
FokI GGATG 2 cut(s) 348, 1085
FriOI GRGCYC 2 cut(s) 20, 486
Fsp4HI GCNGC 8 cut(s) 5, 276, 711, 827, 918, 927, 930, 933
FspBI CTAG 3 cut(s) 128, 498, 659
GluI GCNGC 8 cut(s) 5, 276, 711, 827, 918, 927, 930, 933
HaeIII GGCC 4 cut(s) 37, 800, 810, 1146
HapII CCGG 1 cut(s) 1107
HgaI GACGC 1 cut(s) 878
Hin1II CATG 4 cut(s) 356, 593, 625, 994
HindIII AAGCTT 1 cut(s) 182
HinfI GANTC 4 cut(s) 80, 209, 376, 383
HpaII CCGG 1 cut(s) 1107
HphI GGTGA 2 cut(s) 1047, 1136
Hpy166II GTNNAC 1 cut(s) 155
Hpy188I TCNGA 8 cut(s) 22, 33, 79, 85, 163, 337, 412, 976
Hpy188III TCNNGA 4 cut(s) 64, 380, 422, 674
Hpy8I GTNNAC 1 cut(s) 155
Hpy99I CGWCG 1 cut(s) 141
HpyAV CCTTC 3 cut(s) 640, 833, 1135
HpyCH4III ACNGT 2 cut(s) 401, 478
HpyCH4IV ACGT 1 cut(s) 471
HpyCH4V TGCA 5 cut(s) 278, 731, 806, 829, 932
HpyF10VI GCNNNNNNNGC 9 cut(s) 275, 797, 851, 860, 869, 923, 926, 932, 1041
HpyF3I CTNAG 8 cut(s) 62, 239, 270, 411, 626, 633, 873, 975
HpySE526I ACGT 1 cut(s) 471
Hsp92II CATG 4 cut(s) 356, 593, 625, 994
Ksp22I TGATCA 1 cut(s) 508
Kzo9I GATC 5 cut(s) 8, 85, 133, 163, 508
LguI GCTCTTC 2 cut(s) 228, 774
LmnI GCTCC 5 cut(s) 23, 50, 655, 842, 992
Lsp1109I GCAGC 7 cut(s) 262, 722, 813, 913, 916, 929, 944
LweI GCATC 2 cut(s) 370, 913
MaeI CTAG 3 cut(s) 128, 498, 659
MaeII ACGT 1 cut(s) 471
MaeIII GTNAC 4 cut(s) 328, 472, 1053, 1124
MalI GATC 5 cut(s) 10, 87, 135, 165, 510
MboI GATC 5 cut(s) 8, 85, 133, 163, 508
MboII GAAGA 9 cut(s) 245, 530, 533, 616, 653, 788, 791, 892, 895
MflI RGATCY 1 cut(s) 85
MhlI GDGCHC 3 cut(s) 20, 55, 486
MluCI AATT 2 cut(s) 312, 718
MmeI TCCRAC 1 cut(s) 618
MroXI GAANNNNTTC 2 cut(s) 27, 1102
MseI TTAA 3 cut(s) 315, 716, 764
MslI CAYNNNNRTG 1 cut(s) 1005
MspA1I CMGCKG 4 cut(s) 269, 548, 700, 1028
MspI CCGG 1 cut(s) 1107
MspR9I CCNGG 2 cut(s) 596, 1108
MvaI CCWGG 1 cut(s) 596
MvnI CGCG 1 cut(s) 7
MwoI GCNNNNNNNGC 9 cut(s) 275, 797, 851, 860, 869, 923, 926, 932, 1041
NciI CCSGG 1 cut(s) 1108
NcoI CCATGG 1 cut(s) 990
NdeII GATC 5 cut(s) 8, 85, 133, 163, 508
NlaIII CATG 4 cut(s) 356, 593, 625, 994
NlaIV GGNNCC 5 cut(s) 19, 190, 570, 988, 1105
NmuCI GTSAC 4 cut(s) 328, 472, 1053, 1124
NspI RCATGY 1 cut(s) 625
NspV TTCGAA 1 cut(s) 453
OliI CACNNNNGTG 1 cut(s) 1005
PaeR7I CTCGAG 1 cut(s) 45
PaqCI CACCTGC 1 cut(s) 1066
PciSI GCTCTTC 2 cut(s) 228, 774
PdmI GAANNNNTTC 2 cut(s) 27, 1102
PfeI GAWTC 4 cut(s) 80, 209, 376, 383
PflMI CCANNNNNTGG 2 cut(s) 1028, 1031
PfoI TCCNGGA 1 cut(s) 1106
PkrI GCNGC 8 cut(s) 6, 277, 712, 828, 919, 928, 931, 934
PshAI GACNNNNGTC 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 594
PspEI GGTNACC 1 cut(s) 1053
PspGI CCWGG 1 cut(s) 594
PspN4I GGNNCC 5 cut(s) 19, 190, 570, 988, 1105
PspPI GGNCC 1 cut(s) 1144
PspXI VCTCGAGB 1 cut(s) 45
PstI CTGCAG 1 cut(s) 934
PstNI CAGNNNCTG 1 cut(s) 926
PsuI RGATCY 1 cut(s) 85
PvuII CAGCTG 4 cut(s) 269, 548, 700, 1028
RsaI GTAC 2 cut(s) 406, 939
RsaNI GTAC 2 cut(s) 405, 938
RseI CAYNNNNRTG 1 cut(s) 1005
SapI GCTCTTC 2 cut(s) 228, 774
SaqAI TTAA 3 cut(s) 315, 716, 764
SatI GCNGC 8 cut(s) 5, 276, 711, 827, 918, 927, 930, 933
Sau3AI GATC 5 cut(s) 8, 85, 133, 163, 508
Sau96I GGNCC 1 cut(s) 1144
ScaI AGTACT 1 cut(s) 939
ScrFI CCNGG 2 cut(s) 596, 1108
SduI GDGCHC 3 cut(s) 20, 55, 486
SfaNI GCATC 2 cut(s) 370, 913
SfcI CTRYAG 1 cut(s) 930
Sfr274I CTCGAG 1 cut(s) 45
SfuI TTCGAA 1 cut(s) 453
SlaI CTCGAG 1 cut(s) 45
SmiMI CAYNNNNRTG 1 cut(s) 1005
SmlI CTYRAG 1 cut(s) 45
SmoI CTYRAG 1 cut(s) 45
Sse9I AATT 2 cut(s) 312, 718
SsiI CCGC 2 cut(s) 5, 193
SspMI CTAG 3 cut(s) 128, 498, 659
StyD4I CCNGG 2 cut(s) 594, 1106
StyI CCWWGG 2 cut(s) 486, 990
TaaI ACNGT 2 cut(s) 401, 478
TaiI ACGT 1 cut(s) 474
TaqI TCGA 3 cut(s) 46, 100, 453
TaqII GACCGA 1 cut(s) 129
TasI AATT 2 cut(s) 312, 718
TatI WGTACW 1 cut(s) 937
TauI GCSGC 1 cut(s) 7
TfiI GAWTC 4 cut(s) 80, 209, 376, 383
Tru1I TTAA 3 cut(s) 315, 716, 764
Tru9I TTAA 3 cut(s) 315, 716, 764
TscAI CASTG 4 cut(s) 115, 348, 808, 911
TseFI GTSAC 4 cut(s) 328, 472, 1053, 1124
TseI GCWGC 7 cut(s) 275, 710, 826, 917, 926, 929, 932
Tsp45I GTSAC 4 cut(s) 328, 472, 1053, 1124
TspDTI ATGAA 3 cut(s) 369, 893, 974
TspRI CASTG 4 cut(s) 115, 348, 808, 911
Van91I CCANNNNNTGG 2 cut(s) 1028, 1031
XapI RAATTY 1 cut(s) 718
XceI RCATGY 1 cut(s) 625
XhoI CTCGAG 1 cut(s) 45
XmnI GAANNNNTTC 2 cut(s) 27, 1102
XspI CTAG 3 cut(s) 128, 498, 659
ZrmI AGTACT 1 cut(s) 939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.