MD06G1009700.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
1117871 .. 1121912
4042 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1009700.v1.1.491

Sequence Viewer

Length: 1167 bp
ATGAGTTGCTTTAGTTGCTTCAGTCCTCACCGGAAAGATGTTAGCAAGGTCGAAATCGATAACGGCACTCGATCCTCCGCAGGTAGTGGGAGAGGCAGAGGAAATTCCAATGACAGCGAGTGTGGGAGGGGAAAAGGCAGCAACGGACAGAAAAATGTGGCACGGAGTTTCACATTTCGCGAACTTGCAGCAGCCACCAAAGGCTTCAGGGAAGTGAATTTGATTGGGGAAGGAGGTTTTGGAAGAGTTTACAAAGGCCGGCTTGATGCAGGCCAGGTTGTCGCAATTAAACAACTTAATCATGACGGTGTTCAAGGGTTCCAAGAATTCATTGTTGAGGTTCTCATGTTAAGCCTGCTACACCATACAAATCTGGTCACCTTGATTGGCTACTGTACTGACGGAGATCAGAGACTCTTAATCTATGAGTACATGCCGAGGGGTAGCTTGGAAGATCATCTTTTTGATCTTAGCCCTGGTCAAGAGCCACTGAGTTGGGACACTCGAATTAAGATAGCTGTTGGTGCGGCACGGGGCCTTGAATACCTCCACTGCAAAGCTAACCCACCAGTTATCTACCGTGACTTGAAATCAGCAAATATACTGCTGGATGATGAATTCAATCCAAAGCTTTCAGATTTTGGGCTTGCTAAACTTGCACCTGTGGGTGACAAAACTCATGTCTCAACAAGAGTGATGGGAACATATGGGTACTGTGCACCAGAATATGCCATGAGCGGCAAGTTGACTCTGAAATCTGATATTTATAGCCTTGGTGTGGTTATGTTGGAGCTGATTACTGGGAAGAAGGCAATTGACTGCTCTAAGAGGCCAGGAGAACAGAACCTAGTGTCTTGGTCGCACCCATTTTTGAAGGATCGGAGGAAGTTTGTCCAATTAGTTGATCCTCTGTTGCAAGGACGTTTCCCAGTTCGTTGTTTGCATCATGCAATTGCCATTACTGCCATGTGTCTTCAAGAGCAACCAACTTTCCGTCCTCTTATTACTGATATTGTTGTAGCACTTGAGTACTTGGCGTCCCAGAGCCACAAACCTGACCCTCGTAAAGCTGGGGTCCATAGTCCCTTTTCGGCATCACCTTCACAGCAGAACAGGGATGTTGTCTCTCAGGATTCTTATTGCAGAATGAGTTCAACTTCTATTTAG

Protein Analysis

389

Amino Acids

42.81

Weight (kDa)

8.81

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 70 - 337 3.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 73 - 341 5.3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 71
AccBSI CCGCTC 1 cut(s) 738
AccII CGCG 1 cut(s) 180
AciI CCGC 3 cut(s) 78, 527, 738
AclWI GGATC 3 cut(s) 66, 885, 899
AcsI RAATTY 4 cut(s) 103, 217, 326, 617
AcuI CTGAAG 2 cut(s) 4, 190
AcyI GRCGYC 1 cut(s) 1037
AfaI GTAC 4 cut(s) 397, 431, 713, 1031
AfiI CCNNNNNNNGG 1 cut(s) 778
AgsI TTSAA 7 cut(s) 314, 542, 589, 622, 874, 977, 1155
AjnI CCWGG 3 cut(s) 273, 475, 832
AjuI GAANNNNNNNTTGG 2 cut(s) 222, 254
AluBI AGCT 6 cut(s) 447, 518, 560, 631, 793, 1070
AluI AGCT 6 cut(s) 447, 518, 560, 631, 793, 1070
Alw21I GWGCWC 1 cut(s) 721
Alw26I GTCTC 3 cut(s) 406, 688, 1129
Alw44I GTGCAC 1 cut(s) 717
AlwI GGATC 3 cut(s) 66, 885, 899
AoxI GGCC 4 cut(s) 256, 271, 535, 830
ApaLI GTGCAC 1 cut(s) 717
ApeKI GCWGC 3 cut(s) 138, 188, 191
ApoI RAATTY 4 cut(s) 103, 217, 326, 617
ArsI GACNNNNNNTTYG 2 cut(s) 666, 698
Asp700I GAANNNNTTC 1 cut(s) 1150
AspS9I GGNCC 2 cut(s) 535, 1075
AsuHPI GGTGA 4 cut(s) 20, 370, 680, 1089
AvaII GGWCC 1 cut(s) 1075
BaeGI GKGCMC 1 cut(s) 721
BbsI GAAGAC 1 cut(s) 965
Bbv12I GWGCWC 1 cut(s) 721
BbvI GCAGC 3 cut(s) 150, 200, 203
BccI CCATC 1 cut(s) 691
BceAI ACGGC 1 cut(s) 79
BciT130I CCWGG 3 cut(s) 275, 477, 834
BcoDI GTCTC 3 cut(s) 406, 688, 1129
BfaI CTAG 1 cut(s) 848
BfuAI ACCTGC 1 cut(s) 71
BisI GCNGC 5 cut(s) 139, 189, 192, 528, 739
BlsI GCNGC 5 cut(s) 140, 190, 193, 529, 740
BmcAI AGTACT 1 cut(s) 1031
Bme1390I CCNGG 3 cut(s) 275, 477, 834
Bme18I GGWCC 1 cut(s) 1075
BmgT120I GGNCC 2 cut(s) 535, 1075
BmiI GGNNCC 3 cut(s) 320, 536, 1076
BmrFI CCNGG 3 cut(s) 275, 477, 834
BmrI ACTGGG 2 cut(s) 810, 923
BmsI GCATC 3 cut(s) 256, 952, 1103
BmuI ACTGGG 2 cut(s) 810, 923
BpiI GAAGAC 1 cut(s) 965
BpuEI CTTGAG 1 cut(s) 1046
Bsa29I ATCGAT 1 cut(s) 57
BsaHI GRCGYC 1 cut(s) 1037
BsaJI CCNNGG 3 cut(s) 437, 475, 772
BsaWI WCCGGW 1 cut(s) 30
Bsc4I CCNNNNNNNGG 1 cut(s) 778
Bse118I RCCGGY 1 cut(s) 258
Bse1I ACTGG 3 cut(s) 569, 805, 929
BseBI CCWGG 3 cut(s) 275, 477, 834
BseCI ATCGAT 1 cut(s) 57
BseDI CCNNGG 3 cut(s) 437, 475, 772
BseGI GGATG 2 cut(s) 616, 1123
BseLI CCNNNNNNNGG 1 cut(s) 778
BseMII CTCAG 2 cut(s) 482, 1142
BseNI ACTGG 3 cut(s) 569, 805, 929
BseSI GKGCMC 1 cut(s) 721
BseXI GCAGC 3 cut(s) 150, 200, 203
BseYI CCCAGC 1 cut(s) 1070
Bsh1236I CGCG 1 cut(s) 180
BshFI GGCC 4 cut(s) 258, 273, 537, 832
BshVI ATCGAT 1 cut(s) 57
BsiHKAI GWGCWC 1 cut(s) 721
BsiSI CCGG 2 cut(s) 31, 259
BslFI GGGAC 3 cut(s) 512, 1024, 1068
BslI CCNNNNNNNGG 1 cut(s) 778
BsmAI GTCTC 3 cut(s) 406, 688, 1129
BsmFI GGGAC 3 cut(s) 512, 1024, 1068
BsnI GGCC 4 cut(s) 258, 273, 537, 832
Bsp1286I GDGCHC 1 cut(s) 721
Bsp143I GATC 6 cut(s) 71, 406, 454, 466, 877, 904
Bsp68I TCGCGA 1 cut(s) 180
BspACI CCGC 3 cut(s) 78, 527, 738
BspANI GGCC 4 cut(s) 258, 273, 537, 832
BspCNI CTCAG 2 cut(s) 483, 1141
BspDI ATCGAT 1 cut(s) 57
BspFNI CGCG 1 cut(s) 180
BspHI TCATGA 1 cut(s) 301
BspLI GGNNCC 3 cut(s) 320, 536, 1076
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 3 cut(s) 66, 885, 899
BsrBI CCGCTC 1 cut(s) 738
BsrFI RCCGGY 1 cut(s) 258
BsrI ACTGG 3 cut(s) 569, 805, 929
BssAI RCCGGY 1 cut(s) 258
BssECI CCNNGG 3 cut(s) 437, 475, 772
BssMI GATC 6 cut(s) 71, 406, 454, 466, 877, 904
BssNI GRCGYC 1 cut(s) 1037
BssT1I CCWWGG 1 cut(s) 772
Bst2UI CCWGG 3 cut(s) 275, 477, 834
Bst4CI ACNGT 4 cut(s) 308, 395, 581, 716
Bst6I CTCTTC 1 cut(s) 238
BstACI GRCGYC 1 cut(s) 1037
BstC8I GCNNGC 4 cut(s) 260, 271, 356, 648
BstDEI CTNAG 4 cut(s) 470, 491, 825, 1128
BstEII GGTNACC 1 cut(s) 376
BstF5I GGATG 2 cut(s) 616, 1123
BstFNI CGCG 1 cut(s) 180
BstKTI GATC 6 cut(s) 74, 409, 457, 469, 880, 907
BstMAI GTCTC 3 cut(s) 406, 688, 1129
BstMBI GATC 6 cut(s) 71, 406, 454, 466, 877, 904
BstMWI GCNNNNNNNGC 4 cut(s) 15, 524, 656, 962
BstNI CCWGG 3 cut(s) 275, 477, 834
BstNSI RCATGY 1 cut(s) 436
BstPI GGTNACC 1 cut(s) 376
BstSCI CCNGG 3 cut(s) 273, 475, 832
BstSLI GKGCMC 1 cut(s) 721
BstUI CGCG 1 cut(s) 180
BstV1I GCAGC 3 cut(s) 150, 200, 203
BstV2I GAAGAC 1 cut(s) 965
BstXI CCANNNNNNTGG 1 cut(s) 495
Bsu15I ATCGAT 1 cut(s) 57
BsuRI GGCC 4 cut(s) 258, 273, 537, 832
BsuTUI ATCGAT 1 cut(s) 57
BtsCI GGATG 2 cut(s) 616, 1123
BtsI GCAGTG 1 cut(s) 550
BtsIMutI CAGTG 2 cut(s) 488, 550
BtuMI TCGCGA 1 cut(s) 180
BveI ACCTGC 1 cut(s) 71
Cac8I GCNNGC 4 cut(s) 260, 271, 356, 648
CciI TCATGA 1 cut(s) 301
Cfr10I RCCGGY 1 cut(s) 258
Cfr13I GGNCC 2 cut(s) 535, 1075
ClaI ATCGAT 1 cut(s) 57
CseI GACGC 1 cut(s) 1026
Csp6I GTAC 4 cut(s) 396, 430, 712, 1030
CviAII CATG 7 cut(s) 302, 346, 433, 680, 733, 947, 967
CviQI GTAC 4 cut(s) 396, 430, 712, 1030
DdeI CTNAG 4 cut(s) 470, 491, 825, 1128
DpnI GATC 6 cut(s) 73, 408, 456, 468, 879, 906
DpnII GATC 6 cut(s) 71, 406, 454, 466, 877, 904
Eam1104I CTCTTC 1 cut(s) 238
EarI CTCTTC 1 cut(s) 238
Eco130I CCWWGG 1 cut(s) 772
Eco47I GGWCC 1 cut(s) 1075
Eco57I CTGAAG 2 cut(s) 4, 190
Eco91I GGTNACC 1 cut(s) 376
EcoO109I RGGNCCY 1 cut(s) 535
EcoO65I GGTNACC 1 cut(s) 376
EcoRI GAATTC 2 cut(s) 326, 617
EcoRII CCWGG 3 cut(s) 273, 475, 832
EcoT14I CCWWGG 1 cut(s) 772
ErhI CCWWGG 1 cut(s) 772
FaeI CATG 7 cut(s) 305, 349, 436, 683, 736, 950, 970
FalI AAGNNNNNCTT 4 cut(s) 246, 278, 444, 476
FaqI GGGAC 3 cut(s) 512, 1024, 1068
FatI CATG 7 cut(s) 301, 345, 432, 679, 732, 946, 966
FauNDI CATATG 1 cut(s) 706
Fnu4HI GCNGC 5 cut(s) 139, 189, 192, 528, 739
FokI GGATG 2 cut(s) 623, 1130
Fsp4HI GCNGC 5 cut(s) 139, 189, 192, 528, 739
FspBI CTAG 1 cut(s) 848
GluI GCNGC 5 cut(s) 139, 189, 192, 528, 739
GsaI CCCAGC 1 cut(s) 1074
HaeIII GGCC 4 cut(s) 258, 273, 537, 832
HapII CCGG 2 cut(s) 31, 259
HgaI GACGC 1 cut(s) 1026
Hin1I GRCGYC 1 cut(s) 1037
Hin1II CATG 7 cut(s) 305, 349, 436, 683, 736, 950, 970
HincII GTYRAC 1 cut(s) 747
HindII GTYRAC 1 cut(s) 747
HindIII AAGCTT 1 cut(s) 629
HinfI GANTC 3 cut(s) 414, 748, 1133
HpaII CCGG 2 cut(s) 31, 259
HphI GGTGA 4 cut(s) 20, 370, 680, 1089
Hpy166II GTNNAC 3 cut(s) 250, 719, 747
Hpy188I TCNGA 5 cut(s) 411, 637, 753, 760, 882
Hpy188III TCNNGA 5 cut(s) 179, 302, 482, 977, 1130
Hpy8I GTNNAC 3 cut(s) 250, 719, 747
HpyAV CCTTC 4 cut(s) 224, 802, 868, 1110
HpyCH4III ACNGT 4 cut(s) 308, 395, 581, 716
HpyCH4IV ACGT 1 cut(s) 922
HpyCH4V TGCA 9 cut(s) 188, 269, 555, 659, 719, 916, 943, 950, 1143
HpyF10VI GCNNNNNNNGC 4 cut(s) 15, 524, 656, 962
HpyF3I CTNAG 4 cut(s) 470, 491, 825, 1128
HpySE526I ACGT 1 cut(s) 922
Hsp92I GRCGYC 1 cut(s) 1037
Hsp92II CATG 7 cut(s) 305, 349, 436, 683, 736, 950, 970
KroI GCCGGC 1 cut(s) 258
KroNI GCCGGC 1 cut(s) 260
Kzo9I GATC 6 cut(s) 71, 406, 454, 466, 877, 904
LmnI GCTCC 1 cut(s) 790
Lsp1109I GCAGC 3 cut(s) 150, 200, 203
LweI GCATC 3 cut(s) 256, 952, 1103
MaeI CTAG 1 cut(s) 848
MaeII ACGT 1 cut(s) 922
MaeIII GTNAC 3 cut(s) 376, 581, 668
MalI GATC 6 cut(s) 73, 408, 456, 468, 879, 906
MbiI CCGCTC 1 cut(s) 738
MboI GATC 6 cut(s) 71, 406, 454, 466, 877, 904
MboII GAAGA 4 cut(s) 255, 464, 817, 965
MfeI CAATTG 2 cut(s) 813, 951
MhlI GDGCHC 1 cut(s) 721
MluCI AATT 9 cut(s) 103, 217, 285, 326, 507, 617, 813, 896, 951
MlyI GAGTC 2 cut(s) 408, 742
MmeI TCCRAC 1 cut(s) 768
MroNI GCCGGC 1 cut(s) 258
MroXI GAANNNNTTC 1 cut(s) 1150
MseI TTAA 5 cut(s) 288, 297, 350, 419, 510
MslI CAYNNNNRTG 1 cut(s) 306
MspI CCGG 2 cut(s) 31, 259
MspR9I CCNGG 3 cut(s) 275, 477, 834
MunI CAATTG 2 cut(s) 813, 951
MvaI CCWGG 3 cut(s) 275, 477, 834
MvnI CGCG 1 cut(s) 180
MwoI GCNNNNNNNGC 4 cut(s) 15, 524, 656, 962
NaeI GCCGGC 1 cut(s) 260
NdeI CATATG 1 cut(s) 706
NdeII GATC 6 cut(s) 71, 406, 454, 466, 877, 904
NgoMIV GCCGGC 1 cut(s) 258
NlaIII CATG 7 cut(s) 305, 349, 436, 683, 736, 950, 970
NlaIV GGNNCC 3 cut(s) 320, 536, 1076
NmeAIII GCCGAG 1 cut(s) 462
NmuCI GTSAC 3 cut(s) 376, 581, 668
NruI TCGCGA 1 cut(s) 180
NspI RCATGY 1 cut(s) 436
PagI TCATGA 1 cut(s) 301
PdiI GCCGGC 1 cut(s) 260
PdmI GAANNNNTTC 1 cut(s) 1150
PfeI GAWTC 1 cut(s) 1133
PkrI GCNGC 5 cut(s) 140, 190, 193, 529, 740
PleI GAGTC 2 cut(s) 408, 742
PpsI GAGTC 2 cut(s) 408, 742
Psp6I CCWGG 3 cut(s) 273, 475, 832
PspEI GGTNACC 1 cut(s) 376
PspFI CCCAGC 1 cut(s) 1070
PspGI CCWGG 3 cut(s) 273, 475, 832
PspN4I GGNNCC 3 cut(s) 320, 536, 1076
PspPI GGNCC 2 cut(s) 535, 1075
RruI TCGCGA 1 cut(s) 180
RsaI GTAC 4 cut(s) 397, 431, 713, 1031
RsaNI GTAC 4 cut(s) 396, 430, 712, 1030
RseI CAYNNNNRTG 1 cut(s) 306
SaqAI TTAA 5 cut(s) 288, 297, 350, 419, 510
SatI GCNGC 5 cut(s) 139, 189, 192, 528, 739
Sau3AI GATC 6 cut(s) 71, 406, 454, 466, 877, 904
Sau96I GGNCC 2 cut(s) 535, 1075
ScaI AGTACT 1 cut(s) 1031
SchI GAGTC 2 cut(s) 408, 742
ScrFI CCNGG 3 cut(s) 275, 477, 834
SduI GDGCHC 1 cut(s) 721
SfaNI GCATC 3 cut(s) 256, 952, 1103
SinI GGWCC 1 cut(s) 1075
SmiMI CAYNNNNRTG 1 cut(s) 306
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
Sse9I AATT 9 cut(s) 103, 217, 285, 326, 507, 617, 813, 896, 951
SsiI CCGC 3 cut(s) 78, 527, 738
SspMI CTAG 1 cut(s) 848
StyD4I CCNGG 3 cut(s) 273, 475, 832
StyI CCWWGG 1 cut(s) 772
TaaI ACNGT 4 cut(s) 308, 395, 581, 716
TaiI ACGT 1 cut(s) 925
TaqI TCGA 4 cut(s) 51, 57, 70, 505
TasI AATT 9 cut(s) 103, 217, 285, 326, 507, 617, 813, 896, 951
TatI WGTACW 3 cut(s) 395, 429, 1029
TauI GCSGC 2 cut(s) 530, 741
TfiI GAWTC 1 cut(s) 1133
Tru1I TTAA 5 cut(s) 288, 297, 350, 419, 510
Tru9I TTAA 5 cut(s) 288, 297, 350, 419, 510
TscAI CASTG 2 cut(s) 495, 557
TseFI GTSAC 3 cut(s) 376, 581, 668
TseI GCWGC 3 cut(s) 138, 188, 191
Tsp45I GTSAC 3 cut(s) 376, 581, 668
TspDTI ATGAA 2 cut(s) 319, 630
TspGWI ACGGA 4 cut(s) 159, 178, 417, 983
TspRI CASTG 2 cut(s) 495, 557
VneI GTGCAC 1 cut(s) 717
VpaK11BI GGWCC 1 cut(s) 1075
XapI RAATTY 4 cut(s) 103, 217, 326, 617
XceI RCATGY 1 cut(s) 436
XmnI GAANNNNTTC 1 cut(s) 1150
XspI CTAG 1 cut(s) 848
ZrmI AGTACT 1 cut(s) 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.