Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009748

Physical Location & Seq

Genomic Coordinates Forward (+)

1087573 .. 1092269

Gene Structure 4697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G010800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGAGTTGCTTTAGTTGCTTCAGTCCTCGCCGGAAAGATGTTAGCAAGGTCGAAATTGATAATGGCACTCGATCCTCAGGTAGTGGGAAAGGGAGAGGGCACTCTGATGATACTGAGAGTGGGAGGGGAAAAGGAAAGGGTGGTAACAATTCGCAGCAAAGTGTGGCTCGTAGTTTCACATTTCGCGAACTTGCAGCAGCCACGAAAGGCTTTAGGGAGGTGAATTTGATTGGGGAAGGAGGTTTTGGAAGGGTTTACAAAGGCCGGCTTGATGCAGGCCAGGTTGTCGCAATTAAACAACTTAATCATGACGGTCTTCAAGGGTTTCAAGAATTCATTGTGGAGGTTCTCATGTTAAGCCTACTACACCATACTAATCTTGTCACATTGATTGGCTACTGTACAGACGGAGATCAAAGACTCTTAGTCTATGAGTACATGCCAAGGGGTAGTTTGGAAGATCATCTCTTTGATCTGAGTCCTGATCGAGAGCCACTGAGTTGGGATACTCGTATTAAGATAGCTGTTGGTGCGGCACGGGGCCTTGAATATCTCCACTGCAAAGCTAACCCACCAGTTATCTATCGTGACTTGAAATCAGCAAATATACTGCTGGACGATCAATTCAATCCAAAGCTTTCAGACTTTGGGCTTGCTAAACTTGCACCTGTGGGTGACAAAACTCATGTTTCAACGAGAGTGATGGGAACGTACGGGTACTGTGCACCAGAATATGCCATGAGTGGAAAATTGACACTTAAATCTGATATTTATAGCTTTGGCGTGGTTATGTTGGAGCTGATTACTGGGAAGAAGGCAATTGACTGCTCTAAGAGGCCAGGAGAACAGAACCTAGTATCTTGGTCTCGTCCATTTTTGAAGGACCGGAGGAAGTTTGTTCAATTAGTTGATCCTCTGTTGCAAGGACGCTTCCCAGTTCGTTGTTTGCATCATGCTGTTGCCATTACTGCGATGTGTCTTCAAGAGCAACCAACTTTCCGTCCTCTTATTGGTGATATTGTTGTAGCACTTGAGTATTTGGCCTCACAGACCTACAAACCAGACCTTCGTAAGGCTGGGGTGCATAGTCCCTCTTCGTCATCACCTTCACAGCAGAACAGGAATTTTTTCTCTCCAGCGTCAGATTGCAGAACGAGTAAAACTTTTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002221 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002757 GO:0002758 GO:0002764 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0009941 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031967 GO:0031975 GO:0036211 GO:0038023 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

391

Amino Acids

43.12

Weight (kDa)

9.17

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009748)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20650 AT1G76370
fragaria_vesca	FvH4_5g25320 FvH4_5g25320 FvH4_5g25320 FvH4_5g25320 FvH4_5g25320
malus_domestica	MD06G1009700.v1.1 MD16G1284800.v1.1
prunus_persica	Prupe.5G010800_v2.0.a1
pyrus_communis	pycom06g00800
rosa_chinensis	RchiOBHm_Chr7g0215541
rosa_laevigata	RLG00000002649
rosa_multiflora	Rmu_sc0000898.1_g000097 Rmu_sc0002094.1_g000022
rosa_roxburghii	Rroxscaffold_3G00244120
rosa_rugosa	Rorug04G0205900
rosa_samantha	Rh4CG281000 Rh4DG265000 Rh7BG283000
rosa_wichuraiana	Rw7G024820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	186
AciI	CCGC	1 cut(s)	533
AclWI	GGATC	2 cut(s)	66, 905
AcsI	RAATTY	3 cut(s)	223, 332, 1123
AcuI	CTGAAG	1 cut(s)	4
AfaI	GTAC	4 cut(s)	403, 437, 713, 719
AfiI	CCNNNNNNNGG	2 cut(s)	1010, 1072
AgsI	TTSAA	9 cut(s)	320, 329, 548, 595, 628, 693, 880, 902, 983
AhdI	GACNNNNNGTC	1 cut(s)	425
AjnI	CCWGG	2 cut(s)	279, 838
AjuI	GAANNNNNNNTTGG	2 cut(s)	228, 260
AluBI	AGCT	5 cut(s)	524, 566, 637, 777, 799
AluI	AGCT	5 cut(s)	524, 566, 637, 777, 799
Alw21I	GWGCWC	1 cut(s)	727
Alw26I	GTCTC	1 cut(s)	870
Alw44I	GTGCAC	1 cut(s)	723
AlwI	GGATC	2 cut(s)	66, 905
AoxI	GGCC	5 cut(s)	262, 277, 541, 836, 1041
ApaLI	GTGCAC	1 cut(s)	723
ApeKI	GCWGC	3 cut(s)	154, 194, 197
ApoI	RAATTY	3 cut(s)	223, 332, 1123
Asp700I	GAANNNNTTC	1 cut(s)	1127
AspS9I	GGNCC	2 cut(s)	541, 883
AsuHPI	GGTGA	4 cut(s)	232, 686, 1025, 1095
AvaII	GGWCC	1 cut(s)	883
AxyI	CCTNAGG	1 cut(s)	76
BaeGI	GKGCMC	2 cut(s)	102, 727
BbsI	GAAGAC	2 cut(s)	308, 971
Bbv12I	GWGCWC	1 cut(s)	727
BbvI	GCAGC	3 cut(s)	166, 206, 209
BccI	CCATC	1 cut(s)	697
BciT130I	CCWGG	2 cut(s)	281, 840
BciVI	GTATCC	1 cut(s)	499
BcoDI	GTCTC	1 cut(s)	870
BfaI	CTAG	1 cut(s)	854
BfuI	GTATCC	1 cut(s)	499
BisI	GCNGC	4 cut(s)	155, 195, 198, 534
BlsI	GCNGC	4 cut(s)	156, 196, 199, 535
Bme1390I	CCNGG	2 cut(s)	281, 840
Bme18I	GGWCC	1 cut(s)	883
BmeRI	GACNNNNNGTC	1 cut(s)	425
BmgT120I	GGNCC	2 cut(s)	541, 883
BmiI	GGNNCC	1 cut(s)	542
BmrFI	CCNGG	2 cut(s)	281, 840
BmrI	ACTGGG	2 cut(s)	816, 929
BmsI	GCATC	2 cut(s)	262, 958
BmuI	ACTGGG	2 cut(s)	816, 929
BpiI	GAAGAC	2 cut(s)	308, 971
BpmI	CTGGAG	1 cut(s)	1119
BpuEI	CTTGAG	1 cut(s)	1052
BsaI	GGTCTC	1 cut(s)	870
BsaJI	CCNNGG	1 cut(s)	443
BsaWI	WCCGGW	1 cut(s)	885
Bsc4I	CCNNNNNNNGG	2 cut(s)	1010, 1072
Bse118I	RCCGGY	1 cut(s)	264
Bse1I	ACTGG	3 cut(s)	575, 811, 935
Bse21I	CCTNAGG	1 cut(s)	76
BseBI	CCWGG	2 cut(s)	281, 840
BseDI	CCNNGG	1 cut(s)	443
BseLI	CCNNNNNNNGG	2 cut(s)	1010, 1072
BseMII	CTCAG	4 cut(s)	90, 105, 467, 488
BseNI	ACTGG	3 cut(s)	575, 811, 935
BseSI	GKGCMC	2 cut(s)	102, 727
BseXI	GCAGC	3 cut(s)	166, 206, 209
BseYI	CCCAGC	1 cut(s)	1076
Bsh1236I	CGCG	1 cut(s)	186
BshFI	GGCC	5 cut(s)	264, 279, 543, 838, 1043
BsiHKAI	GWGCWC	1 cut(s)	727
BsiSI	CCGG	3 cut(s)	31, 265, 886
BsiWI	CGTACG	1 cut(s)	711
BslFI	GGGAC	1 cut(s)	1074
BslI	CCNNNNNNNGG	2 cut(s)	1010, 1072
BsmAI	GTCTC	1 cut(s)	870
BsmFI	GGGAC	1 cut(s)	1074
BsnI	GGCC	5 cut(s)	264, 279, 543, 838, 1043
Bso31I	GGTCTC	1 cut(s)	870
Bsp1286I	GDGCHC	2 cut(s)	102, 727
Bsp1407I	TGTACA	1 cut(s)	401
Bsp143I	GATC	7 cut(s)	71, 412, 460, 472, 484, 619, 910
Bsp68I	TCGCGA	1 cut(s)	186
BspACI	CCGC	1 cut(s)	533
BspANI	GGCC	5 cut(s)	264, 279, 543, 838, 1043
BspCNI	CTCAG	4 cut(s)	89, 106, 468, 489
BspFNI	CGCG	1 cut(s)	186
BspHI	TCATGA	1 cut(s)	307
BspLI	GGNNCC	1 cut(s)	542
BspPI	GGATC	2 cut(s)	66, 905
BspTNI	GGTCTC	1 cut(s)	870
BsrFI	RCCGGY	1 cut(s)	264
BsrGI	TGTACA	1 cut(s)	401
BsrI	ACTGG	3 cut(s)	575, 811, 935
BssAI	RCCGGY	1 cut(s)	264
BssECI	CCNNGG	1 cut(s)	443
BssMI	GATC	7 cut(s)	71, 412, 460, 472, 484, 619, 910
BssT1I	CCWWGG	1 cut(s)	443
Bst2UI	CCWGG	2 cut(s)	281, 840
Bst4CI	ACNGT	3 cut(s)	314, 401, 722
Bst6I	CTCTTC	1 cut(s)	1099
BstAUI	TGTACA	1 cut(s)	401
BstC8I	GCNNGC	3 cut(s)	266, 277, 654
BstDEI	CTNAG	6 cut(s)	76, 114, 424, 476, 497, 831
BstENI	CCTNNNNNAGG	1 cut(s)	1070
BstFNI	CGCG	1 cut(s)	186
BstKTI	GATC	7 cut(s)	74, 415, 463, 475, 487, 622, 913
BstMAI	GTCTC	1 cut(s)	870
BstMBI	GATC	7 cut(s)	71, 412, 460, 472, 484, 619, 910
BstMWI	GCNNNNNNNGC	4 cut(s)	15, 530, 662, 968
BstNI	CCWGG	2 cut(s)	281, 840
BstNSI	RCATGY	1 cut(s)	442
BstSCI	CCNGG	2 cut(s)	279, 838
BstSLI	GKGCMC	2 cut(s)	102, 727
BstUI	CGCG	1 cut(s)	186
BstV1I	GCAGC	3 cut(s)	166, 206, 209
BstV2I	GAAGAC	2 cut(s)	308, 971
BstXI	CCANNNNNNTGG	1 cut(s)	501
Bsu36I	CCTNAGG	1 cut(s)	76
BsuI	GTATCC	1 cut(s)	499
BsuRI	GGCC	5 cut(s)	264, 279, 543, 838, 1043
BtgZI	GCGATG	1 cut(s)	986
BtsI	GCAGTG	1 cut(s)	556
BtsIMutI	CAGTG	2 cut(s)	494, 556
BtuMI	TCGCGA	1 cut(s)	186
Cac8I	GCNNGC	3 cut(s)	266, 277, 654
CciI	TCATGA	1 cut(s)	307
Cfr10I	RCCGGY	1 cut(s)	264
Cfr13I	GGNCC	2 cut(s)	541, 883
CseI	GACGC	2 cut(s)	936, 1128
Csp6I	GTAC	4 cut(s)	402, 436, 712, 718
CviAII	CATG	6 cut(s)	308, 352, 439, 686, 739, 953
CviQI	GTAC	4 cut(s)	402, 436, 712, 718
DdeI	CTNAG	6 cut(s)	76, 114, 424, 476, 497, 831
DpnI	GATC	7 cut(s)	73, 414, 462, 474, 486, 621, 912
DpnII	GATC	7 cut(s)	71, 412, 460, 472, 484, 619, 910
DriI	GACNNNNNGTC	1 cut(s)	425
Eam1104I	CTCTTC	1 cut(s)	1099
Eam1105I	GACNNNNNGTC	1 cut(s)	425
EarI	CTCTTC	1 cut(s)	1099
Eco130I	CCWWGG	1 cut(s)	443
Eco31I	GGTCTC	1 cut(s)	870
Eco47I	GGWCC	1 cut(s)	883
Eco57I	CTGAAG	1 cut(s)	4
Eco81I	CCTNAGG	1 cut(s)	76
EcoNI	CCTNNNNNAGG	1 cut(s)	1070
EcoO109I	RGGNCCY	1 cut(s)	541
EcoRI	GAATTC	1 cut(s)	332
EcoRII	CCWGG	2 cut(s)	279, 838
EcoT14I	CCWWGG	1 cut(s)	443
ErhI	CCWWGG	1 cut(s)	443
FaeI	CATG	6 cut(s)	311, 355, 442, 689, 742, 956
FalI	AAGNNNNNCTT	2 cut(s)	252, 284
FaqI	GGGAC	1 cut(s)	1074
FatI	CATG	6 cut(s)	307, 351, 438, 685, 738, 952
Fnu4HI	GCNGC	4 cut(s)	155, 195, 198, 534
Fsp4HI	GCNGC	4 cut(s)	155, 195, 198, 534
FspBI	CTAG	1 cut(s)	854
GluI	GCNGC	4 cut(s)	155, 195, 198, 534
GsaI	CCCAGC	1 cut(s)	1080
GsuI	CTGGAG	1 cut(s)	1119
HaeIII	GGCC	5 cut(s)	264, 279, 543, 838, 1043
HapII	CCGG	3 cut(s)	31, 265, 886
HgaI	GACGC	2 cut(s)	936, 1128
Hin1II	CATG	6 cut(s)	311, 355, 442, 689, 742, 956
HindIII	AAGCTT	1 cut(s)	635
HinfI	GANTC	2 cut(s)	420, 478
HpaII	CCGG	3 cut(s)	31, 265, 886
HphI	GGTGA	4 cut(s)	232, 686, 1025, 1095
Hpy166II	GTNNAC	2 cut(s)	256, 725
Hpy188I	TCNGA	5 cut(s)	106, 477, 643, 766, 1144
Hpy188III	TCNNGA	7 cut(s)	185, 308, 329, 482, 488, 587, 983
Hpy8I	GTNNAC	2 cut(s)	256, 725
HpyAV	CCTTC	6 cut(s)	230, 243, 808, 874, 1076, 1116
HpyCH4III	ACNGT	3 cut(s)	314, 401, 722
HpyCH4IV	ACGT	1 cut(s)	710
HpyCH4V	TGCA	9 cut(s)	194, 275, 561, 665, 725, 922, 949, 1084, 1149
HpyF10VI	GCNNNNNNNGC	4 cut(s)	15, 530, 662, 968
HpyF3I	CTNAG	6 cut(s)	76, 114, 424, 476, 497, 831
HpySE526I	ACGT	1 cut(s)	710
Hsp92II	CATG	6 cut(s)	311, 355, 442, 689, 742, 956
KroI	GCCGGC	1 cut(s)	264
KroNI	GCCGGC	1 cut(s)	266
Kzo9I	GATC	7 cut(s)	71, 412, 460, 472, 484, 619, 910
LmnI	GCTCC	1 cut(s)	796
Lsp1109I	GCAGC	3 cut(s)	166, 206, 209
LweI	GCATC	2 cut(s)	262, 958
MaeI	CTAG	1 cut(s)	854
MaeII	ACGT	1 cut(s)	710
MaeIII	GTNAC	4 cut(s)	143, 382, 587, 674
MalI	GATC	7 cut(s)	73, 414, 462, 474, 486, 621, 912
MboI	GATC	7 cut(s)	71, 412, 460, 472, 484, 619, 910
MboII	GAAGA	5 cut(s)	308, 470, 823, 971, 1086
MfeI	CAATTG	1 cut(s)	819
MhlI	GDGCHC	2 cut(s)	102, 727
MlyI	GAGTC	2 cut(s)	414, 487
MmeI	TCCRAC	1 cut(s)	774
MroNI	GCCGGC	1 cut(s)	264
MroXI	GAANNNNTTC	1 cut(s)	1127
MseI	TTAA	6 cut(s)	294, 303, 356, 516, 759, 1171
MslI	CAYNNNNRTG	1 cut(s)	105
MspI	CCGG	3 cut(s)	31, 265, 886
MspR9I	CCNGG	2 cut(s)	281, 840
MunI	CAATTG	1 cut(s)	819
MvaI	CCWGG	2 cut(s)	281, 840
MvnI	CGCG	1 cut(s)	186
MwoI	GCNNNNNNNGC	4 cut(s)	15, 530, 662, 968
NaeI	GCCGGC	1 cut(s)	266
NdeII	GATC	7 cut(s)	71, 412, 460, 472, 484, 619, 910
NgoMIV	GCCGGC	1 cut(s)	264
NlaIII	CATG	6 cut(s)	311, 355, 442, 689, 742, 956
NlaIV	GGNNCC	1 cut(s)	542
NmuCI	GTSAC	3 cut(s)	382, 587, 674
NruI	TCGCGA	1 cut(s)	186
NspI	RCATGY	1 cut(s)	442
PagI	TCATGA	1 cut(s)	307
PdiI	GCCGGC	1 cut(s)	266
PdmI	GAANNNNTTC	1 cut(s)	1127
Pfl23II	CGTACG	1 cut(s)	711
PkrI	GCNGC	4 cut(s)	156, 196, 199, 535
PleI	GAGTC	2 cut(s)	414, 486
PpsI	GAGTC	2 cut(s)	414, 486
Psp6I	CCWGG	2 cut(s)	279, 838
PspFI	CCCAGC	1 cut(s)	1076
PspGI	CCWGG	2 cut(s)	279, 838
PspLI	CGTACG	1 cut(s)	711
PspN4I	GGNNCC	1 cut(s)	542
PspPI	GGNCC	2 cut(s)	541, 883
RruI	TCGCGA	1 cut(s)	186
RsaI	GTAC	4 cut(s)	403, 437, 713, 719
RsaNI	GTAC	4 cut(s)	402, 436, 712, 718
RseI	CAYNNNNRTG	1 cut(s)	105
SaqAI	TTAA	6 cut(s)	294, 303, 356, 516, 759, 1171
SatI	GCNGC	4 cut(s)	155, 195, 198, 534
Sau3AI	GATC	7 cut(s)	71, 412, 460, 472, 484, 619, 910
Sau96I	GGNCC	2 cut(s)	541, 883
SchI	GAGTC	2 cut(s)	414, 487
ScrFI	CCNGG	2 cut(s)	281, 840
SduI	GDGCHC	2 cut(s)	102, 727
SfaNI	GCATC	2 cut(s)	262, 958
SinI	GGWCC	1 cut(s)	883
SmiMI	CAYNNNNRTG	1 cut(s)	105
SmlI	CTYRAG	1 cut(s)	1031
SmoI	CTYRAG	1 cut(s)	1031
SsiI	CCGC	1 cut(s)	533
SspMI	CTAG	1 cut(s)	854
StyD4I	CCNGG	2 cut(s)	279, 838
StyI	CCWWGG	1 cut(s)	443
TaaI	ACNGT	3 cut(s)	314, 401, 722
TaiI	ACGT	1 cut(s)	713
TaqI	TCGA	3 cut(s)	51, 70, 487
TatI	WGTACW	2 cut(s)	401, 435
TauI	GCSGC	1 cut(s)	536
Tru1I	TTAA	6 cut(s)	294, 303, 356, 516, 759, 1171
Tru9I	TTAA	6 cut(s)	294, 303, 356, 516, 759, 1171
TscAI	CASTG	2 cut(s)	501, 563
TseFI	GTSAC	3 cut(s)	382, 587, 674
TseI	GCWGC	3 cut(s)	154, 194, 197
Tsp45I	GTSAC	3 cut(s)	382, 587, 674
TspDTI	ATGAA	1 cut(s)	325
TspGWI	ACGGA	2 cut(s)	423, 989
TspRI	CASTG	2 cut(s)	501, 563
VneI	GTGCAC	1 cut(s)	723
VpaK11BI	GGWCC	1 cut(s)	883
XagI	CCTNNNNNAGG	1 cut(s)	1070
XapI	RAATTY	3 cut(s)	223, 332, 1123
XceI	RCATGY	1 cut(s)	442
XmnI	GAANNNNTTC	1 cut(s)	1127
XspI	CTAG	1 cut(s)	854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.