Growth-regulating factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24150 AT4G24150 AT4G24150 |
| fragaria_vesca | FvH4_5g10750 FvH4_5g10750 FvH4_5g10750 FvH4_5g10750 |
| malus_domestica | MD06G1121000.v1.1 MD14G1137600.v1.1 |
| prunus_persica | Prupe.5G131600_v2.0.a1 Prupe.5G131600_v2.0.a1 |
| pyrus_communis | pycom06g11230 pycom14g11280 |
| rosa_chinensis | RchiOBHm_Chr7g0187381 |
| rosa_laevigata | RLG00000004788 |
| rosa_multiflora | Rmu_sc0002110.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00267510 |
| rosa_rugosa | Rorug06G0481200 |
| rosa_samantha | Rh7AG085600 Rh7BG087000 Rh7CG086700 Rh7CG086800 Rh7DG087800 |
| rosa_wichuraiana | Rw7G007540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1334 |
| AccIII | TCCGGA | 2 cut(s) | 571, 634 |
| AciI | CCGC | 2 cut(s) | 831, 1050 |
| AclWI | GGATC | 4 cut(s) | 143, 563, 645, 1384 |
| AcsI | RAATTY | 3 cut(s) | 1030, 1071, 1439 |
| AcuI | CTGAAG | 3 cut(s) | 662, 1038, 1368 |
| AdeI | CACNNNGTG | 1 cut(s) | 1334 |
| AfaI | GTAC | 2 cut(s) | 440, 647 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 209, 526, 870, 898, 899, 919, 1239, 1334 |
| AflIII | ACRYGT | 1 cut(s) | 847 |
| AgsI | TTSAA | 4 cut(s) | 684, 940, 1076, 1285 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 848 |
| AjnI | CCWGG | 4 cut(s) | 202, 671, 857, 1330 |
| AleI | CACNNNNGTG | 1 cut(s) | 992 |
| Alw21I | GWGCWC | 2 cut(s) | 566, 1418 |
| Alw26I | GTCTC | 4 cut(s) | 312, 373, 412, 649 |
| AlwI | GGATC | 4 cut(s) | 143, 563, 645, 1384 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1165 |
| Aor13HI | TCCGGA | 2 cut(s) | 571, 634 |
| AoxI | GGCC | 2 cut(s) | 946, 1063 |
| ApoI | RAATTY | 3 cut(s) | 1030, 1071, 1439 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 210, 242 |
| AspS9I | GGNCC | 5 cut(s) | 218, 842, 861, 946, 1337 |
| AsuHPI | GGTGA | 7 cut(s) | 133, 382, 541, 718, 775, 1064, 1317 |
| AvaII | GGWCC | 4 cut(s) | 218, 842, 861, 1337 |
| BanII | GRGCYC | 2 cut(s) | 566, 1418 |
| BauI | CACGAG | 1 cut(s) | 1402 |
| BbsI | GAAGAC | 1 cut(s) | 116 |
| Bbv12I | GWGCWC | 2 cut(s) | 566, 1418 |
| BccI | CCATC | 4 cut(s) | 327, 439, 593, 1312 |
| BciT130I | CCWGG | 4 cut(s) | 204, 673, 859, 1332 |
| BclI | TGATCA | 1 cut(s) | 334 |
| BcoDI | GTCTC | 4 cut(s) | 312, 373, 412, 649 |
| BfaI | CTAG | 3 cut(s) | 807, 822, 1419 |
| BfmI | CTRYAG | 1 cut(s) | 311 |
| BmcAI | AGTACT | 1 cut(s) | 647 |
| Bme1390I | CCNGG | 4 cut(s) | 204, 673, 859, 1332 |
| Bme18I | GGWCC | 4 cut(s) | 218, 842, 861, 1337 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 848 |
| BmgT120I | GGNCC | 5 cut(s) | 218, 842, 861, 946, 1337 |
| BmiI | GGNNCC | 4 cut(s) | 576, 677, 819, 1399 |
| BmrFI | CCNGG | 4 cut(s) | 204, 673, 859, 1332 |
| BmrI | ACTGGG | 1 cut(s) | 1285 |
| BmsI | GCATC | 5 cut(s) | 57, 114, 136, 921, 1087 |
| BmuI | ACTGGG | 1 cut(s) | 1285 |
| BpiI | GAAGAC | 1 cut(s) | 116 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 646, 678 |
| BpmI | CTGGAG | 2 cut(s) | 563, 1218 |
| BpuEI | CTTGAG | 1 cut(s) | 434 |
| BsaJI | CCNNGG | 7 cut(s) | 101, 342, 578, 857, 864, 1060, 1360 |
| BsaWI | WCCGGW | 2 cut(s) | 571, 634 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1382, 1412 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 209, 526, 870, 898, 899, 919, 1239, 1334 |
| Bse1I | ACTGG | 4 cut(s) | 162, 245, 546, 1291 |
| Bse3DI | GCAATG | 2 cut(s) | 1219, 1365 |
| BseAI | TCCGGA | 2 cut(s) | 571, 634 |
| BseBI | CCWGG | 4 cut(s) | 204, 673, 859, 1332 |
| BseDI | CCNNGG | 7 cut(s) | 101, 342, 578, 857, 864, 1060, 1360 |
| BseGI | GGATG | 4 cut(s) | 133, 1003, 1302, 1320 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 209, 526, 870, 898, 899, 919, 1239, 1334 |
| BseMI | GCAATG | 2 cut(s) | 1219, 1365 |
| BseMII | CTCAG | 2 cut(s) | 15, 92 |
| BseNI | ACTGG | 4 cut(s) | 162, 245, 546, 1291 |
| BseYI | CCCAGC | 4 cut(s) | 55, 87, 892, 943 |
| BsgI | GTGCAG | 1 cut(s) | 186 |
| BshFI | GGCC | 2 cut(s) | 948, 1065 |
| BsiHKAI | GWGCWC | 2 cut(s) | 566, 1418 |
| BsiSI | CCGG | 2 cut(s) | 572, 635 |
| BslFI | GGGAC | 4 cut(s) | 233, 446, 491, 1273 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 209, 526, 870, 898, 899, 919, 1239, 1334 |
| BsmAI | GTCTC | 4 cut(s) | 312, 373, 412, 649 |
| BsmFI | GGGAC | 4 cut(s) | 233, 446, 491, 1273 |
| BsmI | GAATGC | 1 cut(s) | 379 |
| BsnI | GGCC | 2 cut(s) | 948, 1065 |
| Bsp1286I | GDGCHC | 2 cut(s) | 566, 1418 |
| Bsp13I | TCCGGA | 2 cut(s) | 571, 634 |
| Bsp143I | GATC | 5 cut(s) | 148, 334, 568, 637, 1376 |
| Bsp19I | CCATGG | 1 cut(s) | 578 |
| BspACI | CCGC | 2 cut(s) | 831, 1050 |
| BspANI | GGCC | 2 cut(s) | 948, 1065 |
| BspCNI | CTCAG | 2 cut(s) | 16, 91 |
| BspEI | TCCGGA | 2 cut(s) | 571, 634 |
| BspHI | TCATGA | 2 cut(s) | 145, 876 |
| BspLI | GGNNCC | 4 cut(s) | 576, 677, 819, 1399 |
| BspMAI | CTGCAG | 1 cut(s) | 315 |
| BspPI | GGATC | 4 cut(s) | 143, 563, 645, 1384 |
| BspQI | GCTCTTC | 1 cut(s) | 402 |
| BsrDI | GCAATG | 2 cut(s) | 1219, 1365 |
| BsrI | ACTGG | 4 cut(s) | 162, 245, 546, 1291 |
| BssECI | CCNNGG | 7 cut(s) | 101, 342, 578, 857, 864, 1060, 1360 |
| BssMI | GATC | 5 cut(s) | 148, 334, 568, 637, 1376 |
| BssSI | CACGAG | 1 cut(s) | 1402 |
| BssT1I | CCWWGG | 5 cut(s) | 342, 578, 864, 1060, 1360 |
| Bst2BI | CACGAG | 1 cut(s) | 1402 |
| Bst2UI | CCWGG | 4 cut(s) | 204, 673, 859, 1332 |
| Bst4CI | ACNGT | 5 cut(s) | 121, 200, 650, 680, 1394 |
| Bst6I | CTCTTC | 5 cut(s) | 166, 402, 457, 1212, 1254 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 322, 931 |
| BstC8I | GCNNGC | 2 cut(s) | 159, 1067 |
| BstDEI | CTNAG | 2 cut(s) | 24, 78 |
| BstDSI | CCRYGG | 1 cut(s) | 578 |
| BstEII | GGTNACC | 1 cut(s) | 1323 |
| BstF5I | GGATG | 4 cut(s) | 133, 1003, 1302, 1320 |
| BstKTI | GATC | 5 cut(s) | 151, 337, 571, 640, 1379 |
| BstMAI | GTCTC | 4 cut(s) | 312, 373, 412, 649 |
| BstMBI | GATC | 5 cut(s) | 148, 334, 568, 637, 1376 |
| BstNI | CCWGG | 4 cut(s) | 204, 673, 859, 1332 |
| BstNSI | RCATGY | 2 cut(s) | 662, 851 |
| BstPI | GGTNACC | 1 cut(s) | 1323 |
| BstSCI | CCNGG | 4 cut(s) | 202, 671, 857, 1330 |
| BstSFI | CTRYAG | 1 cut(s) | 311 |
| BstV2I | GAAGAC | 1 cut(s) | 116 |
| BstX2I | RGATCY | 2 cut(s) | 637, 1376 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 865 |
| BstYI | RGATCY | 2 cut(s) | 637, 1376 |
| BsuRI | GGCC | 2 cut(s) | 948, 1065 |
| BtgI | CCRYGG | 1 cut(s) | 578 |
| BtsCI | GGATG | 4 cut(s) | 133, 1003, 1302, 1320 |
| BtsIMutI | CAGTG | 5 cut(s) | 169, 539, 1025, 1298, 1399 |
| Cac8I | GCNNGC | 2 cut(s) | 159, 1067 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1165 |
| CciI | TCATGA | 2 cut(s) | 145, 876 |
| Cfr13I | GGNCC | 5 cut(s) | 218, 842, 861, 946, 1337 |
| CsiI | ACCWGGT | 1 cut(s) | 1330 |
| Csp6I | GTAC | 2 cut(s) | 439, 646 |
| CviQI | GTAC | 2 cut(s) | 439, 646 |
| DdeI | CTNAG | 2 cut(s) | 24, 78 |
| DpnI | GATC | 5 cut(s) | 150, 336, 570, 639, 1378 |
| DpnII | GATC | 5 cut(s) | 148, 334, 568, 637, 1376 |
| DraIII | CACNNNGTG | 1 cut(s) | 1334 |
| DriI | GACNNNNNGTC | 1 cut(s) | 848 |
| Eam1104I | CTCTTC | 5 cut(s) | 166, 402, 457, 1212, 1254 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 848 |
| EarI | CTCTTC | 5 cut(s) | 166, 402, 457, 1212, 1254 |
| Ecl136II | GAGCTC | 2 cut(s) | 564, 1416 |
| Eco130I | CCWWGG | 5 cut(s) | 342, 578, 864, 1060, 1360 |
| Eco147I | AGGCCT | 1 cut(s) | 1065 |
| Eco24I | GRGCYC | 2 cut(s) | 566, 1418 |
| Eco47I | GGWCC | 4 cut(s) | 218, 842, 861, 1337 |
| Eco53kI | GAGCTC | 2 cut(s) | 564, 1416 |
| Eco57I | CTGAAG | 3 cut(s) | 662, 1038, 1368 |
| Eco91I | GGTNACC | 1 cut(s) | 1323 |
| EcoICRI | GAGCTC | 2 cut(s) | 564, 1416 |
| EcoO109I | RGGNCCY | 1 cut(s) | 861 |
| EcoO65I | GGTNACC | 1 cut(s) | 1323 |
| EcoRII | CCWGG | 4 cut(s) | 202, 671, 857, 1330 |
| EcoT14I | CCWWGG | 5 cut(s) | 342, 578, 864, 1060, 1360 |
| EcoT22I | ATGCAT | 2 cut(s) | 129, 1102 |
| EcoT38I | GRGCYC | 2 cut(s) | 566, 1418 |
| ErhI | CCWWGG | 5 cut(s) | 342, 578, 864, 1060, 1360 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 163, 195, 1154, 1186 |
| FaqI | GGGAC | 4 cut(s) | 233, 446, 491, 1273 |
| FbaI | TGATCA | 1 cut(s) | 334 |
| FokI | GGATG | 4 cut(s) | 120, 1010, 1309, 1327 |
| FriOI | GRGCYC | 2 cut(s) | 566, 1418 |
| FspBI | CTAG | 3 cut(s) | 807, 822, 1419 |
| GsaI | CCCAGC | 4 cut(s) | 59, 91, 896, 947 |
| GsuI | CTGGAG | 2 cut(s) | 563, 1218 |
| HaeIII | GGCC | 2 cut(s) | 948, 1065 |
| HapII | CCGG | 2 cut(s) | 572, 635 |
| HincII | GTYRAC | 1 cut(s) | 1107 |
| HindII | GTYRAC | 1 cut(s) | 1107 |
| HindIII | AAGCTT | 2 cut(s) | 177, 1350 |
| HinfI | GANTC | 3 cut(s) | 381, 449, 698 |
| HpaII | CCGG | 2 cut(s) | 572, 635 |
| HphI | GGTGA | 7 cut(s) | 133, 382, 541, 718, 775, 1064, 1317 |
| Hpy166II | GTNNAC | 5 cut(s) | 218, 539, 1107, 1337, 1424 |
| Hpy188I | TCNGA | 7 cut(s) | 105, 261, 289, 334, 568, 642, 770 |
| Hpy188III | TCNNGA | 8 cut(s) | 146, 250, 572, 621, 635, 684, 877, 1197 |
| Hpy8I | GTNNAC | 5 cut(s) | 218, 539, 1107, 1337, 1424 |
| HpyAV | CCTTC | 4 cut(s) | 22, 526, 1013, 1199 |
| HpyCH4III | ACNGT | 5 cut(s) | 121, 200, 650, 680, 1394 |
| HpyCH4IV | ACGT | 2 cut(s) | 755, 1115 |
| HpyF3I | CTNAG | 2 cut(s) | 24, 78 |
| HpySE526I | ACGT | 2 cut(s) | 755, 1115 |
| Kpn2I | TCCGGA | 2 cut(s) | 571, 634 |
| Ksp22I | TGATCA | 1 cut(s) | 334 |
| Kzo9I | GATC | 5 cut(s) | 148, 334, 568, 637, 1376 |
| LguI | GCTCTTC | 1 cut(s) | 402 |
| LmnI | GCTCC | 6 cut(s) | 32, 561, 574, 637, 922, 1403 |
| LweI | GCATC | 5 cut(s) | 57, 114, 136, 921, 1087 |
| MabI | ACCWGGT | 1 cut(s) | 1330 |
| MaeI | CTAG | 3 cut(s) | 807, 822, 1419 |
| MaeII | ACGT | 2 cut(s) | 755, 1115 |
| MaeIII | GTNAC | 2 cut(s) | 962, 1323 |
| MalI | GATC | 5 cut(s) | 150, 336, 570, 639, 1378 |
| MboI | GATC | 5 cut(s) | 148, 334, 568, 637, 1376 |
| MboII | GAAGA | 9 cut(s) | 118, 121, 183, 419, 444, 1142, 1145, 1229, 1271 |
| MfeI | CAATTG | 1 cut(s) | 501 |
| MflI | RGATCY | 2 cut(s) | 637, 1376 |
| MhlI | GDGCHC | 2 cut(s) | 566, 1418 |
| MluCI | AATT | 7 cut(s) | 470, 501, 760, 935, 1030, 1071, 1439 |
| MlyI | GAGTC | 2 cut(s) | 375, 443 |
| MmeI | TCCRAC | 2 cut(s) | 284, 877 |
| Mph1103I | ATGCAT | 2 cut(s) | 129, 1102 |
| MroI | TCCGGA | 2 cut(s) | 571, 634 |
| MslI | CAYNNNNRTG | 3 cut(s) | 144, 583, 992 |
| MspA1I | CMGCKG | 3 cut(s) | 833, 896, 1050 |
| MspI | CCGG | 2 cut(s) | 572, 635 |
| MspR9I | CCNGG | 4 cut(s) | 204, 673, 859, 1332 |
| MunI | CAATTG | 1 cut(s) | 501 |
| Mva1269I | GAATGC | 1 cut(s) | 379 |
| MvaI | CCWGG | 4 cut(s) | 204, 673, 859, 1332 |
| NcoI | CCATGG | 1 cut(s) | 578 |
| NdeII | GATC | 5 cut(s) | 148, 334, 568, 637, 1376 |
| NlaIV | GGNNCC | 4 cut(s) | 576, 677, 819, 1399 |
| NmuCI | GTSAC | 2 cut(s) | 962, 1323 |
| NsiI | ATGCAT | 2 cut(s) | 129, 1102 |
| NspI | RCATGY | 2 cut(s) | 662, 851 |
| OliI | CACNNNNGTG | 1 cut(s) | 992 |
| PagI | TCATGA | 2 cut(s) | 145, 876 |
| PceI | AGGCCT | 1 cut(s) | 1065 |
| PciI | ACATGT | 1 cut(s) | 847 |
| PciSI | GCTCTTC | 1 cut(s) | 402 |
| PctI | GAATGC | 1 cut(s) | 379 |
| PfeI | GAWTC | 1 cut(s) | 698 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1334 |
| PleI | GAGTC | 2 cut(s) | 375, 443 |
| PpsI | GAGTC | 2 cut(s) | 375, 443 |
| PpuMI | RGGWCCY | 1 cut(s) | 861 |
| PscI | ACATGT | 1 cut(s) | 847 |
| Psp124BI | GAGCTC | 2 cut(s) | 566, 1418 |
| Psp5II | RGGWCCY | 1 cut(s) | 861 |
| Psp6I | CCWGG | 4 cut(s) | 202, 671, 857, 1330 |
| PspEI | GGTNACC | 1 cut(s) | 1323 |
| PspFI | CCCAGC | 4 cut(s) | 55, 87, 892, 943 |
| PspGI | CCWGG | 4 cut(s) | 202, 671, 857, 1330 |
| PspN4I | GGNNCC | 4 cut(s) | 576, 677, 819, 1399 |
| PspPI | GGNCC | 5 cut(s) | 218, 842, 861, 946, 1337 |
| PspPPI | RGGWCCY | 1 cut(s) | 861 |
| PstI | CTGCAG | 1 cut(s) | 315 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1165 |
| PsuI | RGATCY | 2 cut(s) | 637, 1376 |
| PvuII | CAGCTG | 1 cut(s) | 896 |
| RsaI | GTAC | 2 cut(s) | 440, 647 |
| RsaNI | GTAC | 2 cut(s) | 439, 646 |
| RseI | CAYNNNNRTG | 3 cut(s) | 144, 583, 992 |
| SacI | GAGCTC | 2 cut(s) | 566, 1418 |
| SapI | GCTCTTC | 1 cut(s) | 402 |
| Sau3AI | GATC | 5 cut(s) | 148, 334, 568, 637, 1376 |
| Sau96I | GGNCC | 5 cut(s) | 218, 842, 861, 946, 1337 |
| ScaI | AGTACT | 1 cut(s) | 647 |
| SchI | GAGTC | 2 cut(s) | 375, 443 |
| ScrFI | CCNGG | 4 cut(s) | 204, 673, 859, 1332 |
| SduI | GDGCHC | 2 cut(s) | 566, 1418 |
| SexAI | ACCWGGT | 1 cut(s) | 1330 |
| SfaNI | GCATC | 5 cut(s) | 57, 114, 136, 921, 1087 |
| SfcI | CTRYAG | 1 cut(s) | 311 |
| SinI | GGWCC | 4 cut(s) | 218, 842, 861, 1337 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 144, 583, 992 |
| SmlI | CTYRAG | 1 cut(s) | 413 |
| SmoI | CTYRAG | 1 cut(s) | 413 |
| Sse9I | AATT | 7 cut(s) | 470, 501, 760, 935, 1030, 1071, 1439 |
| SseBI | AGGCCT | 1 cut(s) | 1065 |
| SsiI | CCGC | 2 cut(s) | 831, 1050 |
| SspMI | CTAG | 3 cut(s) | 807, 822, 1419 |
| SstI | GAGCTC | 2 cut(s) | 566, 1418 |
| StuI | AGGCCT | 1 cut(s) | 1065 |
| StyD4I | CCNGG | 4 cut(s) | 202, 671, 857, 1330 |
| StyI | CCWWGG | 5 cut(s) | 342, 578, 864, 1060, 1360 |
| TaaI | ACNGT | 5 cut(s) | 121, 200, 650, 680, 1394 |
| TaiI | ACGT | 2 cut(s) | 758, 1118 |
| TasI | AATT | 7 cut(s) | 470, 501, 760, 935, 1030, 1071, 1439 |
| TatI | WGTACW | 2 cut(s) | 438, 645 |
| TauI | GCSGC | 1 cut(s) | 833 |
| TfiI | GAWTC | 1 cut(s) | 698 |
| TscAI | CASTG | 5 cut(s) | 169, 546, 1032, 1298, 1399 |
| TseFI | GTSAC | 2 cut(s) | 962, 1323 |
| Tsp45I | GTSAC | 2 cut(s) | 962, 1323 |
| TspDTI | ATGAA | 6 cut(s) | 865, 893, 1081, 1164, 1230, 1313 |
| TspRI | CASTG | 5 cut(s) | 169, 546, 1032, 1298, 1399 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1334 |
| VpaK11BI | GGWCC | 4 cut(s) | 218, 842, 861, 1337 |
| XapI | RAATTY | 3 cut(s) | 1030, 1071, 1439 |
| XceI | RCATGY | 2 cut(s) | 662, 851 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 364, 1241 |
| XspI | CTAG | 3 cut(s) | 807, 822, 1419 |
| ZrmI | AGTACT | 1 cut(s) | 647 |
| Zsp2I | ATGCAT | 2 cut(s) | 129, 1102 |