MD14G1137600.v1.1

Growth-regulating factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
22492159 .. 22495911
3753 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1137600.v1.1.491

Sequence Viewer

Length: 1434 bp
ATGGGACAAAGAAATGGGTTTGCTGAGAAGGGAGCAGCAGCAGAAACAGAGTGGCTGGGATTGATGATGCGAAAAACCCAGCAAACCCAGCAATCATTTCCTCGGAAGAAGACGATGATGGTGATGAATCACCATAATCATCATCATGATCCTTTGCTTGCCAGTGCAGGAAGAGAAGCTTGTGGGGTTTGGGATAACAGTCCTGCTTCTGGTGGTGGACTTTTGTTTTGCAACACAAGCAATCCAGTCTCGAGTTGTCCGACTGATTTATATCCTGTCGGCTCTGATTTTGTCCTCCCAAAGTCTCTACAGCACCATCTGCCTTGCTCTGATCACAGCTTGGCTTTCAGTTCCACAGGTGGAATGGTGAATGCGAATGAGAGAGTTCCTTTTACATCAGCTCAAAGGGAAGAGCTTGAGAGACAGACAATGATTTACAAGTACATGGACTCTTCCCCTGCCCCTCCCCAATTACTTTTACCAATTTCCAAGTTCCCAAATTTGGTGAAAGGTTCACTGGAGTTGGGGATTTCCGGGAGCTCAGATCCGGAGCCATGGAGGTGCAAAAGAACAGATGGCAAAAAATGGAGGTGTTCCAGAGATGTAGCTTTTGATCAGAAGTATTGTGAGAGACATGCTCACAAGACCAGGAACCGTTCAAGAAAGCCTGTGGATTCCCAAACCCTAAACCCCAACCTCCTCACCAACAACAACAACATGAGAAGTCCTAGGTCTAATTTTTTCAGACAAAACCACATCAGCAGCCAGACAACTCCATTTTCTTGCAACATGGTTCCTAGTACTGCTGCTGGTGGATCACATGTCCAACCCAGGTCGTCGGCATGGTTCATGAATGGGGAAGCCCCAGCTGTGGATGGTTCAAACCAAGAGTGGGAACAAATGATGCAATTCAAGTTGGGCCTAAAGAGGAGCAGCAGCAGCTGCCCCTACACGAAGCCTACTAACAGAGATGTGGATATTCCGAAGCAGCAAACTGAAAGCTCACTAAATTTGCACACAGATTACACAGGTGAAATCCAAGGCCTGCAAACTCAACAGACAAGGCAAATCATCGATGCATGGTCCACGTTAGCATCAGCAGAGAGAGAAGACAGGGTCTTTGTTTCTTCAAACCAGAAGCTTCCCATTTCATCTCTCACTCTATCAATGTGTGGTGGGGAAGGAAGCAATGAAGAGAGAGGAAGTACCCTAATGGGGATTGGGGTTTTGGGGGCAGAGAGGGAAAGTGTTGGGGATTTGAAGTCTCAGCGGGCGAACCCCATGTCTTGGGTGATGGGGTCACCACCTGGTGGACCATTGGCTGAAGCTTTGTGCCTTGGCATTGCTGGTGGTTCTAATGGCAGCGACAGTGGCTCCACCAGCTATAGGAGCTCACGTGGAGATGGTAGACAAGAATATGGTTTGATTAACTAA

Protein Analysis

478

Amino Acids

52.29

Weight (kDa)

8.58

Isoelectric Point (pI)

49.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QLQ PF08880 130 - 162 1.8e-06 QLQ
WRC PF08879 183 - 224 4.6e-19 WRC
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1287, 1310
AccI GTMKAC 1 cut(s) 1408
AccIII TCCGGA 1 cut(s) 547
AciI CCGC 1 cut(s) 1270
AclWI GGATC 3 cut(s) 143, 539, 823
AcsI RAATTY 2 cut(s) 499, 1009
AcuI CTGAAG 1 cut(s) 1344
AcvI CACGTG 1 cut(s) 1397
AdeI CACNNNGTG 1 cut(s) 1310
AfaI GTAC 3 cut(s) 443, 802, 1207
AfiI CCNNNNNNNGG 8 cut(s) 209, 502, 871, 892, 1215, 1287, 1310, 1386
AflIII ACRYGT 1 cut(s) 820
AgsI TTSAA 5 cut(s) 660, 882, 913, 1131, 1261
AjnI CCWGG 3 cut(s) 647, 830, 1306
Alw21I GWGCWC 2 cut(s) 542, 1394
Alw26I GTCTC 5 cut(s) 253, 309, 415, 625, 1269
AlwI GGATC 3 cut(s) 143, 539, 823
AlwNI CAGNNNCTG 1 cut(s) 942
Ama87I CYCGRG 1 cut(s) 250
Aor13HI TCCGGA 1 cut(s) 547
AoxI GGCC 2 cut(s) 919, 1042
ApoI RAATTY 2 cut(s) 499, 1009
ArsI GACNNNNNNTTYG 6 cut(s) 210, 242, 1103, 1135, 1268, 1300
AspA2I CCTAGG 1 cut(s) 728
AspS9I GGNCC 3 cut(s) 919, 1083, 1313
AsuC2I CCSGG 1 cut(s) 535
AsuHPI GGTGA 8 cut(s) 122, 133, 379, 517, 694, 1043, 1293, 1303
AvaI CYCGRG 1 cut(s) 250
AvaII GGWCC 2 cut(s) 1083, 1313
AvrII CCTAGG 1 cut(s) 728
BanII GRGCYC 2 cut(s) 542, 1394
BbrPI CACGTG 1 cut(s) 1397
BbsI GAAGAC 2 cut(s) 116, 1116
Bbv12I GWGCWC 2 cut(s) 542, 1394
BccI CCATC 6 cut(s) 112, 324, 569, 869, 1288, 1397
BciT130I CCWGG 3 cut(s) 649, 832, 1308
BclI TGATCA 2 cut(s) 331, 613
BcnI CCSGG 1 cut(s) 535
BcoDI GTCTC 5 cut(s) 253, 309, 415, 625, 1269
BfaI CTAG 2 cut(s) 729, 798
BfmI CTRYAG 2 cut(s) 308, 1384
BlnI CCTAGG 1 cut(s) 728
BmcAI AGTACT 1 cut(s) 802
Bme1390I CCNGG 4 cut(s) 535, 649, 832, 1308
Bme18I GGWCC 2 cut(s) 1083, 1313
BmeT110I CYCGRG 1 cut(s) 250
BmgT120I GGNCC 3 cut(s) 919, 1083, 1313
BmiI GGNNCC 4 cut(s) 552, 653, 795, 1375
BmrFI CCNGG 4 cut(s) 535, 649, 832, 1308
BmsI GCATC 4 cut(s) 57, 894, 1066, 1103
BpiI GAAGAC 2 cut(s) 116, 1116
BplI GAGNNNNNCTC 2 cut(s) 622, 654
BpmI CTGGAG 1 cut(s) 539
BpuEI CTTGAG 1 cut(s) 437
BpuMI CCSGG 1 cut(s) 535
Bsa29I ATCGAT 1 cut(s) 1074
BsaAI YACGTR 1 cut(s) 1397
BsaBI GATNNNNATC 1 cut(s) 270
BsaJI CCNNGG 6 cut(s) 101, 554, 728, 830, 1039, 1336
BsaWI WCCGGW 1 cut(s) 547
BsaXI ACNNNNNCTCC 4 cut(s) 1358, 1381, 1388, 1411
Bsc4I CCNNNNNNNGG 8 cut(s) 209, 502, 871, 892, 1215, 1287, 1310, 1386
Bse1I ACTGG 3 cut(s) 162, 245, 522
Bse3DI GCAATG 2 cut(s) 1195, 1341
Bse8I GATNNNNATC 1 cut(s) 270
BseAI TCCGGA 1 cut(s) 547
BseBI CCWGG 3 cut(s) 649, 832, 1308
BseCI ATCGAT 1 cut(s) 1074
BseDI CCNNGG 6 cut(s) 101, 554, 728, 830, 1039, 1336
BseGI GGATG 1 cut(s) 880
BseJI GATNNNNATC 1 cut(s) 270
BseLI CCNNNNNNNGG 8 cut(s) 209, 502, 871, 892, 1215, 1287, 1310, 1386
BseMI GCAATG 2 cut(s) 1195, 1341
BseMII CTCAG 3 cut(s) 15, 555, 1280
BseNI ACTGG 3 cut(s) 162, 245, 522
BseRI GAGGAG 2 cut(s) 689, 943
BseYI CCCAGC 4 cut(s) 55, 78, 87, 865
BsgI GTGCAG 1 cut(s) 186
BshFI GGCC 2 cut(s) 921, 1044
BshVI ATCGAT 1 cut(s) 1074
BsiHKAI GWGCWC 2 cut(s) 542, 1394
BsiHKCI CYCGRG 1 cut(s) 250
BsiSI CCGG 2 cut(s) 534, 548
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 8 cut(s) 209, 502, 871, 892, 1215, 1287, 1310, 1386
BsmAI GTCTC 5 cut(s) 253, 309, 415, 625, 1269
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 1 cut(s) 376
BsnI GGCC 2 cut(s) 921, 1044
BsoBI CYCGRG 1 cut(s) 250
Bsp1286I GDGCHC 2 cut(s) 542, 1394
Bsp13I TCCGGA 1 cut(s) 547
Bsp143I GATC 5 cut(s) 148, 331, 544, 613, 815
Bsp19I CCATGG 1 cut(s) 554
BspACI CCGC 1 cut(s) 1270
BspANI GGCC 2 cut(s) 921, 1044
BspCNI CTCAG 3 cut(s) 16, 554, 1279
BspDI ATCGAT 1 cut(s) 1074
BspEI TCCGGA 1 cut(s) 547
BspHI TCATGA 2 cut(s) 145, 849
BspLI GGNNCC 4 cut(s) 552, 653, 795, 1375
BspPI GGATC 3 cut(s) 143, 539, 823
BspQI GCTCTTC 1 cut(s) 405
BsrDI GCAATG 2 cut(s) 1195, 1341
BsrI ACTGG 3 cut(s) 162, 245, 522
BssECI CCNNGG 6 cut(s) 101, 554, 728, 830, 1039, 1336
BssMI GATC 5 cut(s) 148, 331, 544, 613, 815
BssT1I CCWWGG 4 cut(s) 554, 728, 1039, 1336
Bst2UI CCWGG 3 cut(s) 649, 832, 1308
Bst4CI ACNGT 3 cut(s) 200, 656, 1370
Bst6I CTCTTC 4 cut(s) 166, 405, 457, 1188
BstAPI GCANNNNNTGC 2 cut(s) 319, 942
BstBAI YACGTR 1 cut(s) 1397
BstC8I GCNNGC 3 cut(s) 159, 1046, 1272
BstDEI CTNAG 3 cut(s) 24, 541, 1266
BstDSI CCRYGG 1 cut(s) 554
BstEII GGTNACC 1 cut(s) 1299
BstF5I GGATG 1 cut(s) 880
BstKTI GATC 5 cut(s) 151, 334, 547, 616, 818
BstMAI GTCTC 5 cut(s) 253, 309, 415, 625, 1269
BstMBI GATC 5 cut(s) 148, 331, 544, 613, 815
BstMWI GCNNNNNNNGC 8 cut(s) 88, 237, 319, 939, 942, 1371, 1380, 1389
BstNI CCWGG 3 cut(s) 649, 832, 1308
BstNSI RCATGY 2 cut(s) 638, 824
BstPI GGTNACC 1 cut(s) 1299
BstSCI CCNGG 4 cut(s) 533, 647, 830, 1306
BstSFI CTRYAG 2 cut(s) 308, 1384
BstV2I GAAGAC 2 cut(s) 116, 1116
BstX2I RGATCY 1 cut(s) 544
BstYI RGATCY 1 cut(s) 544
Bsu15I ATCGAT 1 cut(s) 1074
BsuRI GGCC 2 cut(s) 921, 1044
BsuTUI ATCGAT 1 cut(s) 1074
BtgI CCRYGG 1 cut(s) 554
BtsCI GGATG 1 cut(s) 880
BtsIMutI CAGTG 3 cut(s) 169, 515, 1375
Cac8I GCNNGC 3 cut(s) 159, 1046, 1272
CaiI CAGNNNCTG 1 cut(s) 942
CciI TCATGA 2 cut(s) 145, 849
Cfr13I GGNCC 3 cut(s) 919, 1083, 1313
ClaI ATCGAT 1 cut(s) 1074
CsiI ACCWGGT 1 cut(s) 1306
Csp6I GTAC 3 cut(s) 442, 801, 1206
CviQI GTAC 3 cut(s) 442, 801, 1206
DdeI CTNAG 3 cut(s) 24, 541, 1266
DpnI GATC 5 cut(s) 150, 333, 546, 615, 817
DpnII GATC 5 cut(s) 148, 331, 544, 613, 815
DraIII CACNNNGTG 1 cut(s) 1310
Eam1104I CTCTTC 4 cut(s) 166, 405, 457, 1188
EarI CTCTTC 4 cut(s) 166, 405, 457, 1188
Ecl136II GAGCTC 2 cut(s) 540, 1392
Eco130I CCWWGG 4 cut(s) 554, 728, 1039, 1336
Eco147I AGGCCT 1 cut(s) 1044
Eco24I GRGCYC 2 cut(s) 542, 1394
Eco47I GGWCC 2 cut(s) 1083, 1313
Eco53kI GAGCTC 2 cut(s) 540, 1392
Eco57I CTGAAG 1 cut(s) 1344
Eco72I CACGTG 1 cut(s) 1397
Eco88I CYCGRG 1 cut(s) 250
Eco91I GGTNACC 1 cut(s) 1299
EcoICRI GAGCTC 2 cut(s) 540, 1392
EcoO65I GGTNACC 1 cut(s) 1299
EcoRII CCWGG 3 cut(s) 647, 830, 1306
EcoT14I CCWWGG 4 cut(s) 554, 728, 1039, 1336
EcoT22I ATGCAT 1 cut(s) 1081
EcoT38I GRGCYC 2 cut(s) 542, 1394
ErhI CCWWGG 4 cut(s) 554, 728, 1039, 1336
FalI AAGNNNNNCTT 2 cut(s) 163, 195
FaqI GGGAC 1 cut(s) 18
FauI CCCGC 1 cut(s) 1263
FbaI TGATCA 2 cut(s) 331, 613
FblI GTMKAC 1 cut(s) 1408
FokI GGATG 1 cut(s) 887
FriOI GRGCYC 2 cut(s) 542, 1394
FspBI CTAG 2 cut(s) 729, 798
GsaI CCCAGC 4 cut(s) 59, 82, 91, 869
GsuI CTGGAG 1 cut(s) 539
HaeIII GGCC 2 cut(s) 921, 1044
HapII CCGG 2 cut(s) 534, 548
HindIII AAGCTT 3 cut(s) 177, 1139, 1326
HinfI GANTC 3 cut(s) 127, 449, 674
HpaII CCGG 2 cut(s) 534, 548
HphI GGTGA 8 cut(s) 122, 133, 379, 517, 694, 1043, 1293, 1303
Hpy166II GTNNAC 5 cut(s) 218, 515, 1086, 1313, 1409
Hpy188I TCNGA 8 cut(s) 105, 261, 286, 331, 544, 618, 746, 984
Hpy188III TCNNGA 6 cut(s) 146, 250, 548, 597, 660, 850
Hpy8I GTNNAC 5 cut(s) 218, 515, 1086, 1313, 1409
Hpy99I CGWCG 1 cut(s) 841
HpyAV CCTTC 2 cut(s) 22, 1175
HpyCH4III ACNGT 3 cut(s) 200, 656, 1370
HpyCH4IV ACGT 2 cut(s) 1088, 1396
HpyCH4V TGCA 8 cut(s) 167, 231, 564, 786, 907, 1015, 1048, 1079
HpyF10VI GCNNNNNNNGC 8 cut(s) 88, 237, 319, 939, 942, 1371, 1380, 1389
HpyF3I CTNAG 3 cut(s) 24, 541, 1266
HpySE526I ACGT 2 cut(s) 1088, 1396
Kpn2I TCCGGA 1 cut(s) 547
Ksp22I TGATCA 2 cut(s) 331, 613
Kzo9I GATC 5 cut(s) 148, 331, 544, 613, 815
LguI GCTCTTC 1 cut(s) 405
LmnI GCTCC 6 cut(s) 32, 537, 550, 930, 1379, 1389
LweI GCATC 4 cut(s) 57, 894, 1066, 1103
MabI ACCWGGT 1 cut(s) 1306
MaeI CTAG 2 cut(s) 729, 798
MaeII ACGT 2 cut(s) 1088, 1396
MaeIII GTNAC 1 cut(s) 1299
MalI GATC 5 cut(s) 150, 333, 546, 615, 817
MboI GATC 5 cut(s) 148, 331, 544, 613, 815
MboII GAAGA 8 cut(s) 118, 121, 183, 422, 444, 1119, 1121, 1205
MflI RGATCY 1 cut(s) 544
MhlI GDGCHC 2 cut(s) 542, 1394
MluCI AATT 6 cut(s) 470, 483, 499, 736, 908, 1009
MlyI GAGTC 1 cut(s) 443
MmeI TCCRAC 2 cut(s) 284, 850
Mph1103I ATGCAT 1 cut(s) 1081
MroI TCCGGA 1 cut(s) 547
MseI TTAA 1 cut(s) 1428
MslI CAYNNNNRTG 2 cut(s) 144, 559
MspA1I CMGCKG 3 cut(s) 869, 942, 1270
MspI CCGG 2 cut(s) 534, 548
MspR9I CCNGG 4 cut(s) 535, 649, 832, 1308
Mva1269I GAATGC 1 cut(s) 376
MvaI CCWGG 3 cut(s) 649, 832, 1308
MwoI GCNNNNNNNGC 8 cut(s) 88, 237, 319, 939, 942, 1371, 1380, 1389
NciI CCSGG 1 cut(s) 535
NcoI CCATGG 1 cut(s) 554
NdeII GATC 5 cut(s) 148, 331, 544, 613, 815
NlaIV GGNNCC 4 cut(s) 552, 653, 795, 1375
NmuCI GTSAC 1 cut(s) 1299
NsiI ATGCAT 1 cut(s) 1081
NspI RCATGY 2 cut(s) 638, 824
PaeR7I CTCGAG 1 cut(s) 250
PagI TCATGA 2 cut(s) 145, 849
PceI AGGCCT 1 cut(s) 1044
PciI ACATGT 1 cut(s) 820
PciSI GCTCTTC 1 cut(s) 405
PcsI WCGNNNNNNNCGW 1 cut(s) 257
PctI GAATGC 1 cut(s) 376
PfeI GAWTC 2 cut(s) 127, 674
PflFI GACNNNGTC 1 cut(s) 1115
PflMI CCANNNNNTGG 2 cut(s) 1287, 1310
PfoI TCCNGGA 1 cut(s) 533
PleI GAGTC 1 cut(s) 443
PmaCI CACGTG 1 cut(s) 1397
PmlI CACGTG 1 cut(s) 1397
PpsI GAGTC 1 cut(s) 443
Ppu21I YACGTR 1 cut(s) 1397
PscI ACATGT 1 cut(s) 820
Psp124BI GAGCTC 2 cut(s) 542, 1394
Psp6I CCWGG 3 cut(s) 647, 830, 1306
PspCI CACGTG 1 cut(s) 1397
PspEI GGTNACC 1 cut(s) 1299
PspFI CCCAGC 4 cut(s) 55, 78, 87, 865
PspGI CCWGG 3 cut(s) 647, 830, 1306
PspN4I GGNNCC 4 cut(s) 552, 653, 795, 1375
PspPI GGNCC 3 cut(s) 919, 1083, 1313
PstNI CAGNNNCTG 1 cut(s) 942
PsuI RGATCY 1 cut(s) 544
PsyI GACNNNGTC 1 cut(s) 1115
PvuII CAGCTG 2 cut(s) 869, 942
RsaI GTAC 3 cut(s) 443, 802, 1207
RsaNI GTAC 3 cut(s) 442, 801, 1206
RseI CAYNNNNRTG 2 cut(s) 144, 559
SacI GAGCTC 2 cut(s) 542, 1394
SapI GCTCTTC 1 cut(s) 405
SaqAI TTAA 1 cut(s) 1428
Sau3AI GATC 5 cut(s) 148, 331, 544, 613, 815
Sau96I GGNCC 3 cut(s) 919, 1083, 1313
ScaI AGTACT 1 cut(s) 802
SchI GAGTC 1 cut(s) 443
ScrFI CCNGG 4 cut(s) 535, 649, 832, 1308
SduI GDGCHC 2 cut(s) 542, 1394
SexAI ACCWGGT 1 cut(s) 1306
SfaNI GCATC 4 cut(s) 57, 894, 1066, 1103
SfcI CTRYAG 2 cut(s) 308, 1384
Sfr274I CTCGAG 1 cut(s) 250
SinI GGWCC 2 cut(s) 1083, 1313
SlaI CTCGAG 1 cut(s) 250
SmiMI CAYNNNNRTG 2 cut(s) 144, 559
SmlI CTYRAG 2 cut(s) 250, 416
SmoI CTYRAG 2 cut(s) 250, 416
Sse9I AATT 6 cut(s) 470, 483, 499, 736, 908, 1009
SseBI AGGCCT 1 cut(s) 1044
SsiI CCGC 1 cut(s) 1270
SspMI CTAG 2 cut(s) 729, 798
SstI GAGCTC 2 cut(s) 542, 1394
StuI AGGCCT 1 cut(s) 1044
StyD4I CCNGG 4 cut(s) 533, 647, 830, 1306
StyI CCWWGG 4 cut(s) 554, 728, 1039, 1336
TaaI ACNGT 3 cut(s) 200, 656, 1370
TaiI ACGT 2 cut(s) 1091, 1399
TaqI TCGA 2 cut(s) 251, 1074
TasI AATT 6 cut(s) 470, 483, 499, 736, 908, 1009
TatI WGTACW 2 cut(s) 441, 800
TfiI GAWTC 2 cut(s) 127, 674
Tru1I TTAA 1 cut(s) 1428
Tru9I TTAA 1 cut(s) 1428
TscAI CASTG 3 cut(s) 169, 522, 1375
TseFI GTSAC 1 cut(s) 1299
Tsp45I GTSAC 1 cut(s) 1299
TspDTI ATGAA 5 cut(s) 140, 838, 866, 1140, 1206
TspRI CASTG 3 cut(s) 169, 522, 1375
Tth111I GACNNNGTC 1 cut(s) 1115
Van91I CCANNNNNTGG 2 cut(s) 1287, 1310
VpaK11BI GGWCC 2 cut(s) 1083, 1313
XapI RAATTY 2 cut(s) 499, 1009
XceI RCATGY 2 cut(s) 638, 824
XcmI CCANNNNNNNNNTGG 1 cut(s) 361
XhoI CTCGAG 1 cut(s) 250
XmaJI CCTAGG 1 cut(s) 728
XmiI GTMKAC 1 cut(s) 1408
XspI CTAG 2 cut(s) 729, 798
ZrmI AGTACT 1 cut(s) 802
Zsp2I ATGCAT 1 cut(s) 1081
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.