Rh7CG086800

Growth-regulating factor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
6536014 .. 6536565
552 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG086800.1

Sequence Viewer

Length: 552 bp
ATGCCATTCAAGTTGGGTTTGAACAGCCACACCAGCAAGCGTGACACAGATGTGGATTTTCCAAAGCAACAAAATGAGAGCTCACTCAATTTGTATGGGGGTGGTAGCCAAGGTCTGCAGAGTCAGAGGTCACATGACTATTTGGGAGGAGCTTTAAATTCAAATCAGGCACAACAGACAAGGCATTTCATTGATGCTTGGTCCACTGAGAGAGATGGTAATGGCATTGATGAGCTTGGCCAGAGGAAGAGGGGCTCTGTTGCATTAAACCAGAAGCTGCCCCTTTCATCCCTCACTCTATCAATGTCTGGTGAGAATAGTGAAGCCAATGAAGAAAATGGAAATAGGCAAATGGGTGTTGGGGTTTTCGGTTCAGAAAGGCAGAATGTAACATGGATGAGCCCACTTTCATGGATGAGCTCAACACCTGGTGGACCTTTGGCTGAAGCTTTGTGCCTTGGCATTGCCAGTTCCACAAGAGCAACAACAGCCTCTAATGGCTGTAGAAGCTCAAACGCAGATGTTAGACAAGAATTTGATTTGATTAACTAA

Protein Analysis

183

Amino Acids

19.75

Weight (kDa)

5.6

Isoelectric Point (pI)

52.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 238
AcsI RAATTY 2 cut(s) 157, 533
AcuI CTGAAG 1 cut(s) 465
AdeI CACNNNGTG 1 cut(s) 431
AgsI TTSAA 3 cut(s) 10, 22, 162
AjnI CCWGG 1 cut(s) 427
AleI CACNNNNGTG 1 cut(s) 50
AluBI AGCT 7 cut(s) 81, 152, 235, 277, 420, 449, 510
AluI AGCT 7 cut(s) 81, 152, 235, 277, 420, 449, 510
Alw21I GWGCWC 2 cut(s) 83, 422
AlwNI CAGNNNCTG 1 cut(s) 277
AoxI GGCC 1 cut(s) 238
ApeKI GCWGC 1 cut(s) 277
ApoI RAATTY 2 cut(s) 157, 533
AspS9I GGNCC 2 cut(s) 201, 434
AsuHPI GGTGA 1 cut(s) 323
AvaII GGWCC 2 cut(s) 201, 434
BalI TGGCCA 1 cut(s) 240
BanII GRGCYC 4 cut(s) 83, 257, 404, 422
Bbv12I GWGCWC 2 cut(s) 83, 422
BbvI GCAGC 1 cut(s) 264
BccI CCATC 1 cut(s) 209
BciT130I CCWGG 1 cut(s) 429
BfmI CTRYAG 2 cut(s) 116, 502
BisI GCNGC 1 cut(s) 278
BlsI GCNGC 1 cut(s) 279
Bme1390I CCNGG 1 cut(s) 429
Bme18I GGWCC 2 cut(s) 201, 434
BmgT120I GGNCC 2 cut(s) 201, 434
BmrFI CCNGG 1 cut(s) 429
BmsI GCATC 1 cut(s) 184
BsaJI CCNNGG 2 cut(s) 109, 457
Bse1I ACTGG 1 cut(s) 468
Bse3DI GCAATG 1 cut(s) 462
BseBI CCWGG 1 cut(s) 429
BseDI CCNNGG 2 cut(s) 109, 457
BseGI GGATG 3 cut(s) 287, 402, 420
BseMI GCAATG 1 cut(s) 462
BseMII CTCAG 1 cut(s) 198
BseNI ACTGG 1 cut(s) 468
BseRI GAGGAG 1 cut(s) 162
BseXI GCAGC 1 cut(s) 264
BshFI GGCC 1 cut(s) 240
BsiHKAI GWGCWC 2 cut(s) 83, 422
BsnI GGCC 1 cut(s) 240
Bsp1286I GDGCHC 4 cut(s) 83, 257, 404, 422
BspANI GGCC 1 cut(s) 240
BspCNI CTCAG 1 cut(s) 199
BspMAI CTGCAG 1 cut(s) 120
BsrDI GCAATG 1 cut(s) 462
BsrI ACTGG 1 cut(s) 468
BssECI CCNNGG 2 cut(s) 109, 457
BssT1I CCWWGG 2 cut(s) 109, 457
Bst2UI CCWGG 1 cut(s) 429
Bst6I CTCTTC 1 cut(s) 242
BstC8I GCNNGC 1 cut(s) 38
BstDEI CTNAG 1 cut(s) 207
BstF5I GGATG 3 cut(s) 287, 402, 420
BstMWI GCNNNNNNNGC 3 cut(s) 33, 488, 507
BstNI CCWGG 1 cut(s) 429
BstSCI CCNGG 1 cut(s) 427
BstSFI CTRYAG 2 cut(s) 116, 502
BstV1I GCAGC 1 cut(s) 264
BstXI CCANNNNNNTGG 1 cut(s) 411
BsuRI GGCC 1 cut(s) 240
BtsCI GGATG 3 cut(s) 287, 402, 420
BtsIMutI CAGTG 1 cut(s) 204
Cac8I GCNNGC 1 cut(s) 38
CaiI CAGNNNCTG 1 cut(s) 277
Cfr13I GGNCC 2 cut(s) 201, 434
CsiI ACCWGGT 1 cut(s) 427
CviAII CATG 3 cut(s) 134, 393, 411
DdeI CTNAG 1 cut(s) 207
DraI TTTAAA 1 cut(s) 156
DraIII CACNNNGTG 1 cut(s) 431
EaeI YGGCCR 1 cut(s) 238
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
Ecl136II GAGCTC 2 cut(s) 81, 420
Eco130I CCWWGG 2 cut(s) 109, 457
Eco24I GRGCYC 4 cut(s) 83, 257, 404, 422
Eco47I GGWCC 2 cut(s) 201, 434
Eco53kI GAGCTC 2 cut(s) 81, 420
Eco57I CTGAAG 1 cut(s) 465
EcoICRI GAGCTC 2 cut(s) 81, 420
EcoRII CCWGG 1 cut(s) 427
EcoT14I CCWWGG 2 cut(s) 109, 457
EcoT38I GRGCYC 4 cut(s) 83, 257, 404, 422
ErhI CCWWGG 2 cut(s) 109, 457
FaeI CATG 3 cut(s) 137, 396, 414
FaiI YATR 4 cut(s) 96, 135, 394, 412
FatI CATG 3 cut(s) 133, 392, 410
Fnu4HI GCNGC 1 cut(s) 278
FokI GGATG 3 cut(s) 274, 409, 427
FriOI GRGCYC 4 cut(s) 83, 257, 404, 422
Fsp4HI GCNGC 1 cut(s) 278
GluI GCNGC 1 cut(s) 278
HaeIII GGCC 1 cut(s) 240
Hin1II CATG 3 cut(s) 137, 396, 414
HindIII AAGCTT 1 cut(s) 447
HinfI GANTC 1 cut(s) 121
HphI GGTGA 1 cut(s) 323
Hpy166II GTNNAC 2 cut(s) 204, 434
Hpy188I TCNGA 2 cut(s) 126, 376
Hpy8I GTNNAC 2 cut(s) 204, 434
HpyCH4V TGCA 2 cut(s) 118, 263
HpyF10VI GCNNNNNNNGC 3 cut(s) 33, 488, 507
HpyF3I CTNAG 1 cut(s) 207
Hsp92II CATG 3 cut(s) 137, 396, 414
LmnI GCTCC 1 cut(s) 149
LpnPI CCDG 8 cut(s) 46, 152, 254, 284, 294, 414, 441, 481
Lsp1109I GCAGC 1 cut(s) 264
LweI GCATC 1 cut(s) 184
MabI ACCWGGT 1 cut(s) 427
MaeIII GTNAC 3 cut(s) 41, 129, 388
MboII GAAGA 2 cut(s) 259, 344
MhlI GDGCHC 4 cut(s) 83, 257, 404, 422
MlsI TGGCCA 1 cut(s) 240
MluCI AATT 3 cut(s) 88, 157, 533
MluNI TGGCCA 1 cut(s) 240
MlyI GAGTC 1 cut(s) 130
MnlI CCTC 6 cut(s) 120, 140, 237, 243, 302, 502
Mox20I TGGCCA 1 cut(s) 240
MscI TGGCCA 1 cut(s) 240
MseI TTAA 3 cut(s) 155, 266, 546
MslI CAYNNNNRTG 2 cut(s) 50, 409
Msp20I TGGCCA 1 cut(s) 240
MspR9I CCNGG 1 cut(s) 429
MvaI CCWGG 1 cut(s) 429
MwoI GCNNNNNNNGC 3 cut(s) 33, 488, 507
NlaIII CATG 3 cut(s) 137, 396, 414
NmuCI GTSAC 2 cut(s) 41, 129
OliI CACNNNNGTG 1 cut(s) 50
PkrI GCNGC 1 cut(s) 279
PleI GAGTC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 129
Psp124BI GAGCTC 2 cut(s) 83, 422
Psp6I CCWGG 1 cut(s) 427
PspGI CCWGG 1 cut(s) 427
PspPI GGNCC 2 cut(s) 201, 434
PstI CTGCAG 1 cut(s) 120
PstNI CAGNNNCTG 1 cut(s) 277
RseI CAYNNNNRTG 2 cut(s) 50, 409
SacI GAGCTC 2 cut(s) 83, 422
SaqAI TTAA 3 cut(s) 155, 266, 546
SatI GCNGC 1 cut(s) 278
Sau96I GGNCC 2 cut(s) 201, 434
SchI GAGTC 1 cut(s) 130
ScrFI CCNGG 1 cut(s) 429
SduI GDGCHC 4 cut(s) 83, 257, 404, 422
SexAI ACCWGGT 1 cut(s) 427
SfaNI GCATC 1 cut(s) 184
SfcI CTRYAG 2 cut(s) 116, 502
SinI GGWCC 2 cut(s) 201, 434
SmiMI CAYNNNNRTG 2 cut(s) 50, 409
Sse9I AATT 3 cut(s) 88, 157, 533
SstI GAGCTC 2 cut(s) 83, 422
StyD4I CCNGG 1 cut(s) 427
StyI CCWWGG 2 cut(s) 109, 457
TasI AATT 3 cut(s) 88, 157, 533
Tru1I TTAA 3 cut(s) 155, 266, 546
Tru9I TTAA 3 cut(s) 155, 266, 546
TscAI CASTG 1 cut(s) 211
TseFI GTSAC 2 cut(s) 41, 129
TseI GCWGC 1 cut(s) 277
Tsp45I GTSAC 2 cut(s) 41, 129
TspDTI ATGAA 4 cut(s) 178, 276, 345, 399
TspRI CASTG 1 cut(s) 211
VpaK11BI GGWCC 2 cut(s) 201, 434
XapI RAATTY 2 cut(s) 157, 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.