Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0009551

Physical Location & Seq

Genomic Coordinates Forward (+)

28285227 .. 28288186

Gene Structure 2960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1137800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGAACTCGCTCCACACGACCCGGGTTCTAATCCGCTCCGACCGGACGAACCAGAGCTCGACCTCTACTCCATCCCACGCCACTCTAGATGGTTTTTGTGGGATGAGATTCATGAAAATGAGAGAATTGCATTGAAAGAGTATTTTGATGGGAGCTCGATATCTAGGACTCCGAAAACGTACAAGGACTACAGGGATTTTATCATTAATAAGTATAGAGAGGATCCTTCTAGGAAGCTCACATTCACTGAGGTTAGGAAGTCGCTTGTGGGTGATGTTAGTTTGCTTCATAAGGTGTTTAATTTCTTGGAGAAGTGGGGGTTGATTAATTTCGGTGTGAATTCGGGTGGCGGAGGGGGTTTTGTGGCCGGGGGTGAGGAGAGGTGTAAGGTGAAGGTTGAGGATGGAGTCCCCAATGGGATCCGAGTGGCTGAAATGCCGAATTCCATTAAACCCATTTTGCCAGTTTCCGGTCAAGCTAAAGTTGGGGACGTTGGGGGCGGTGGAGGTGTGAGTAGAATTGGGTTTCCTCCATTGGCATCATATTCTAATGTTTTTGGTGATTTGAAGAAGGAGGTGTTGGTTTGTGGAAACTGTGGTGTGCATTGCGATTCTGGACACTACAAGTATAGCAAGGGTGATTTTCTAATTTGTGCAAAGTGTTTTGAAAATGGAAATTGTGGGGAAACCAGATTGAGGGATGACTTCAAGTTAAATGAGGCAGTTGAGAAGAGCGGTAATCATGGAGCTGAGTGGACTGAATCAGAAACCCTATTACTTTTAGAATCTGTTTTCAAGCATGGGGATGATTGGGACCTTGTTGCTCAAAATGTTCAGACCAAGACCAAATTTGATTGTATCGCTAAGCTCATTGATCTGCCTTTTGGGGAGCTTGTGTTGGGTTCTGCCTACAGAAAAGGCAATTCTAGTGGCTTTAGTGCTAATTTGGACTGTTCAAAGCAAGTTCAGTTATCTTCATCTGAGTGTCAAGAGACTATCATAACCAACGGTCAGTTGCATGAGCAGACGGATGACAGCAAGCAGAATGGAGACACGTTGAATAAAGGGCCCCCTTTGAAAAGACAGCGCACTGCTTCTCTTTCGGATGCTAGTAGTTCACTGATTAAGCAGGTAGCTGCCATATCAACCATGGTTGGTCCACAAATTACAGCTGCTGCAGCTGATGCTGCCGTAAATGTGCTTTGTGAGGAAACCTCATGTTCAAAGGACATATTTGATGCTGATGACGATTCTCTTACTAATGGCTTGTGGTCTCCTGCTAAAAACTGTGAGACAGAGAGAGACCAAGATGGGGATTCGGAAATGAAGGAAAAGCCAACCGAATCAGAGAGTCAGGATGCACTCTTCAGAAAAGATGACATACCTCCAAGTTTGCAACTTCGAGCTGCCATTGGAACAGCTCTCGGAGCAGCTGCCTCTCACTCAAAATTATTGGCTGATCAGGAGGATAGAGAGATTGAATATCTGATGGCAACCATAATTGGGACACAGATGAAAAAGTTGCACTTCAAACTGAATTACTTTGAAGGTCTGGAGCAGATCATGAAGAAGGAACATGCTCAAATTGAAGACGTAGAAGATTTTCTCGTACAAGAACGGATTAATGTCTTACAAAGAACATTTGACTCCGGTGTACCTAGATGGATGGGTCATCCCTCAATAAAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SURF2 SWIRM SWIRM-assoc_1

Protein Analysis

564

Amino Acids

62.13

Weight (kDa)

5.14

Isoelectric Point (pI)

37.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	34 - 111	5.8e-25	SWIRM domain
Myb_DNA-binding	PF00249	251 - 289	1.1e-07	Myb-like DNA-binding domain
SWIRM-assoc_1	PF16495	473 - 546	1.8e-18	SWIRM-associated region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47620 AT2G47620
fragaria_vesca	FvH4_5g08750 FvH4_5g08750
malus_domestica	MD06G1137800.v1.1 MD14G1152600.v1.1
prunus_persica	Prupe.5G147600_v2.0.a1 Prupe.5G147600_v2.0.a1
pyrus_communis	pycom06g12900 pycom14g12700
rosa_chinensis	RchiOBHm_Chr7g0189531
rosa_laevigata	RLG00000004603
rosa_multiflora	Rmu_co8438941.1_g000001 Rmu_sc0001924.1_g000010 Rmu_sc0009639.1_g000010 Rmu_sc0042771.1_g000001
rosa_rugosa	Rorug06G0498800
rosa_samantha	Rh7AG103700 Rh7BG106400 Rh7CG108500 Rh7DG105800
rosa_wichuraiana	Rw7G008950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1120
AccBSI	CCGCTC	2 cut(s)	37, 735
AciI	CCGC	4 cut(s)	35, 351, 501, 735
AclWI	GGATC	4 cut(s)	218, 231, 415, 428
AcoI	YGGCCR	1 cut(s)	366
AcsI	RAATTY	3 cut(s)	340, 442, 848
AcuI	CTGAAG	1 cut(s)	1351
AfaI	GTAC	3 cut(s)	182, 1611, 1656
AfiI	CCNNNNNNNGG	4 cut(s)	470, 696, 1312, 1503
AflIII	ACRYGT	1 cut(s)	1053
AjuI	GAANNNNNNNTTGG	2 cut(s)	563, 595
Alw21I	GWGCWC	2 cut(s)	60, 158
Alw26I	GTCTC	5 cut(s)	986, 1044, 1278, 1286, 1296
AlwI	GGATC	4 cut(s)	218, 231, 415, 428
AlwNI	CAGNNNCTG	1 cut(s)	1175
Ama87I	CYCGRG	1 cut(s)	22
AoxI	GGCC	2 cut(s)	366, 1067
ApaI	GGGCCC	1 cut(s)	1071
ApeKI	GCWGC	8 cut(s)	1136, 1172, 1175, 1178, 1187, 1406, 1430, 1433
ApoI	RAATTY	3 cut(s)	340, 442, 848
AseI	ATTAAT	3 cut(s)	207, 327, 1623
Asp700I	GAANNNNTTC	1 cut(s)	1602
AspLEI	GCGC	1 cut(s)	1089
AspS9I	GGNCC	4 cut(s)	814, 1067, 1068, 1157
AsuC2I	CCSGG	3 cut(s)	23, 24, 370
AsuHPI	GGTGA	5 cut(s)	284, 386, 403, 572, 650
AvaI	CYCGRG	1 cut(s)	22
AvaII	GGWCC	2 cut(s)	814, 1157
BaeGI	GKGCMC	1 cut(s)	1071
BamHI	GGATCC	2 cut(s)	223, 420
BanII	GRGCYC	3 cut(s)	60, 158, 1071
BbsI	GAAGAC	1 cut(s)	1596
Bbv12I	GWGCWC	2 cut(s)	60, 158
BbvI	GCAGC	8 cut(s)	1123, 1159, 1162, 1174, 1190, 1393, 1420, 1442
BccI	CCATC	8 cut(s)	80, 84, 143, 398, 1304, 1483, 1656, 1660
BceAI	ACGGC	1 cut(s)	1175
BclI	TGATCA	1 cut(s)	1459
BcnI	CCSGG	3 cut(s)	23, 24, 370
BcoDI	GTCTC	5 cut(s)	986, 1044, 1278, 1286, 1296
BfaI	CTAG	6 cut(s)	87, 165, 231, 927, 1110, 1659
BfmI	CTRYAG	3 cut(s)	190, 910, 1176
BfuAI	ACCTGC	1 cut(s)	1120
BisI	GCNGC	8 cut(s)	1137, 1173, 1176, 1179, 1188, 1407, 1431, 1434
BlpI	GCTNAGC	1 cut(s)	864
BlsI	GCNGC	8 cut(s)	1138, 1174, 1177, 1180, 1189, 1408, 1432, 1435
Bme1390I	CCNGG	3 cut(s)	23, 24, 370
Bme18I	GGWCC	2 cut(s)	814, 1157
BmeT110I	CYCGRG	1 cut(s)	22
BmgT120I	GGNCC	4 cut(s)	814, 1067, 1068, 1157
BmiI	GGNNCC	5 cut(s)	225, 422, 815, 1069, 1070
BmrFI	CCNGG	3 cut(s)	23, 24, 370
BmsI	GCATC	5 cut(s)	548, 1096, 1174, 1228, 1348
BpiI	GAAGAC	1 cut(s)	1596
BplI	GAGNNNNNCTC	2 cut(s)	1199, 1231
BpmI	CTGGAG	1 cut(s)	1574
Bpu1102I	GCTNAGC	1 cut(s)	864
BpuMI	CCSGG	3 cut(s)	23, 24, 370
BsaI	GGTCTC	2 cut(s)	1278, 1296
BsaJI	CCNNGG	3 cut(s)	22, 369, 1149
BsaWI	WCCGGW	3 cut(s)	43, 470, 1649
BsaXI	ACNNNNNCTCC	4 cut(s)	53, 83, 881, 911
Bsc4I	CCNNNNNNNGG	4 cut(s)	470, 696, 1312, 1503
Bse1I	ACTGG	1 cut(s)	464
Bse3DI	GCAATG	1 cut(s)	604
BseDI	CCNNGG	3 cut(s)	22, 369, 1149
BseLI	CCNNNNNNNGG	4 cut(s)	470, 696, 1312, 1503
BseMI	GCAATG	1 cut(s)	604
BseMII	CTCAG	3 cut(s)	240, 741, 972
BseNI	ACTGG	1 cut(s)	464
BseRI	GAGGAG	1 cut(s)	392
BseSI	GKGCMC	1 cut(s)	1071
BseXI	GCAGC	8 cut(s)	1123, 1159, 1162, 1174, 1190, 1393, 1420, 1442
Bsh1285I	CGRYCG	1 cut(s)	44
BshFI	GGCC	2 cut(s)	368, 1069
BsiEI	CGRYCG	1 cut(s)	44
BsiHKAI	GWGCWC	2 cut(s)	60, 158
BsiHKCI	CYCGRG	1 cut(s)	22
BsiSI	CCGG	5 cut(s)	23, 44, 369, 471, 1650
BslFI	GGGAC	4 cut(s)	395, 503, 827, 1519
BslI	CCNNNNNNNGG	4 cut(s)	470, 696, 1312, 1503
BsmAI	GTCTC	5 cut(s)	986, 1044, 1278, 1286, 1296
BsmFI	GGGAC	4 cut(s)	395, 503, 827, 1519
BsnI	GGCC	2 cut(s)	368, 1069
Bso31I	GGTCTC	2 cut(s)	1278, 1296
BsoBI	CYCGRG	1 cut(s)	22
Bsp120I	GGGCCC	1 cut(s)	1067
Bsp1286I	GDGCHC	3 cut(s)	60, 158, 1071
Bsp143I	GATC	5 cut(s)	223, 420, 874, 1459, 1560
Bsp1720I	GCTNAGC	1 cut(s)	864
Bsp19I	CCATGG	1 cut(s)	1149
BspACI	CCGC	4 cut(s)	35, 351, 501, 735
BspANI	GGCC	2 cut(s)	368, 1069
BspCNI	CTCAG	3 cut(s)	241, 742, 973
BspHI	TCATGA	2 cut(s)	112, 1563
BspLI	GGNNCC	5 cut(s)	225, 422, 815, 1069, 1070
BspMAI	CTGCAG	1 cut(s)	1180
BspMI	ACCTGC	1 cut(s)	1120
BspPI	GGATC	4 cut(s)	218, 231, 415, 428
BspQI	GCTCTTC	1 cut(s)	725
BspTNI	GGTCTC	2 cut(s)	1278, 1296
BsrBI	CCGCTC	2 cut(s)	37, 735
BsrDI	GCAATG	1 cut(s)	604
BsrI	ACTGG	1 cut(s)	464
BssECI	CCNNGG	3 cut(s)	22, 369, 1149
BssMI	GATC	5 cut(s)	223, 420, 874, 1459, 1560
BssT1I	CCWWGG	1 cut(s)	1149
Bst4CI	ACNGT	4 cut(s)	596, 953, 1010, 1289
Bst6I	CTCTTC	2 cut(s)	725, 1370
BstAPI	GCANNNNNTGC	1 cut(s)	1184
BstC8I	GCNNGC	1 cut(s)	1040
BstDEI	CTNAG	4 cut(s)	249, 750, 864, 981
BstDSI	CCRYGG	1 cut(s)	1149
BstHHI	GCGC	1 cut(s)	1089
BstKTI	GATC	5 cut(s)	226, 423, 877, 1462, 1563
BstMAI	GTCTC	5 cut(s)	986, 1044, 1278, 1286, 1296
BstMBI	GATC	5 cut(s)	223, 420, 874, 1459, 1560
BstMCI	CGRYCG	1 cut(s)	44
BstMWI	GCNNNNNNNGC	4 cut(s)	1178, 1184, 1187, 1427
BstNSI	RCATGY	1 cut(s)	1580
BstSCI	CCNGG	3 cut(s)	21, 22, 368
BstSFI	CTRYAG	3 cut(s)	190, 910, 1176
BstSLI	GKGCMC	1 cut(s)	1071
BstV1I	GCAGC	8 cut(s)	1123, 1159, 1162, 1174, 1190, 1393, 1420, 1442
BstV2I	GAAGAC	1 cut(s)	1596
BstX2I	RGATCY	2 cut(s)	223, 420
BstYI	RGATCY	2 cut(s)	223, 420
BsuRI	GGCC	2 cut(s)	368, 1069
BtgI	CCRYGG	1 cut(s)	1149
BtsI	GCAGTG	1 cut(s)	1089
BtsIMutI	CAGTG	3 cut(s)	246, 1089, 1118
BveI	ACCTGC	1 cut(s)	1120
Cac8I	GCNNGC	1 cut(s)	1040
CaiI	CAGNNNCTG	1 cut(s)	1175
CciI	TCATGA	2 cut(s)	112, 1563
CfoI	GCGC	1 cut(s)	1089
Cfr13I	GGNCC	4 cut(s)	814, 1067, 1068, 1157
Cfr9I	CCCGGG	1 cut(s)	22
Csp6I	GTAC	3 cut(s)	181, 1610, 1655
CspCI	CAANNNNNGTGG	2 cut(s)	910, 945
CviAII	CATG	8 cut(s)	113, 743, 800, 1019, 1150, 1218, 1564, 1577
CviQI	GTAC	3 cut(s)	181, 1610, 1655
DdeI	CTNAG	4 cut(s)	249, 750, 864, 981
DpnI	GATC	5 cut(s)	225, 422, 876, 1461, 1562
DpnII	GATC	5 cut(s)	223, 420, 874, 1459, 1560
EaeI	YGGCCR	1 cut(s)	366
Eam1104I	CTCTTC	2 cut(s)	725, 1370
EarI	CTCTTC	2 cut(s)	725, 1370
EciI	GGCGGA	1 cut(s)	366
Ecl136II	GAGCTC	2 cut(s)	58, 156
Eco130I	CCWWGG	1 cut(s)	1149
Eco24I	GRGCYC	3 cut(s)	60, 158, 1071
Eco31I	GGTCTC	2 cut(s)	1278, 1296
Eco32I	GATATC	1 cut(s)	162
Eco47I	GGWCC	2 cut(s)	814, 1157
Eco53kI	GAGCTC	2 cut(s)	58, 156
Eco57I	CTGAAG	1 cut(s)	1351
Eco88I	CYCGRG	1 cut(s)	22
EcoICRI	GAGCTC	2 cut(s)	58, 156
EcoO109I	RGGNCCY	3 cut(s)	814, 1067, 1068
EcoRI	GAATTC	2 cut(s)	340, 442
EcoRV	GATATC	1 cut(s)	162
EcoT14I	CCWWGG	1 cut(s)	1149
EcoT38I	GRGCYC	3 cut(s)	60, 158, 1071
ErhI	CCWWGG	1 cut(s)	1149
FaeI	CATG	8 cut(s)	116, 746, 803, 1022, 1153, 1221, 1567, 1580
FalI	AAGNNNNNCTT	2 cut(s)	1511, 1543
FaqI	GGGAC	4 cut(s)	395, 503, 827, 1519
FatI	CATG	8 cut(s)	112, 742, 799, 1018, 1149, 1217, 1563, 1576
FbaI	TGATCA	1 cut(s)	1459
Fnu4HI	GCNGC	8 cut(s)	1137, 1173, 1176, 1179, 1188, 1407, 1431, 1434
FriOI	GRGCYC	3 cut(s)	60, 158, 1071
Fsp4HI	GCNGC	8 cut(s)	1137, 1173, 1176, 1179, 1188, 1407, 1431, 1434
FspBI	CTAG	6 cut(s)	87, 165, 231, 927, 1110, 1659
GlaI	GCGC	1 cut(s)	1088
GluI	GCNGC	8 cut(s)	1137, 1173, 1176, 1179, 1188, 1407, 1431, 1434
GsuI	CTGGAG	1 cut(s)	1574
HaeIII	GGCC	2 cut(s)	368, 1069
HapII	CCGG	5 cut(s)	23, 44, 369, 471, 1650
HhaI	GCGC	1 cut(s)	1089
Hin1II	CATG	8 cut(s)	116, 746, 803, 1022, 1153, 1221, 1567, 1580
Hin6I	GCGC	1 cut(s)	1087
HinP1I	GCGC	1 cut(s)	1087
HpaII	CCGG	5 cut(s)	23, 44, 369, 471, 1650
HphI	GGTGA	5 cut(s)	284, 386, 403, 572, 650
Hpy166II	GTNNAC	4 cut(s)	756, 1118, 1160, 1655
Hpy188III	TCNNGA	9 cut(s)	87, 113, 615, 989, 1355, 1463, 1553, 1564, 1689
Hpy8I	GTNNAC	4 cut(s)	756, 1118, 1160, 1655
HpyAV	CCTTC	6 cut(s)	237, 388, 565, 1321, 1541, 1564
HpyCH4III	ACNGT	4 cut(s)	596, 953, 1010, 1289
HpyCH4IV	ACGT	4 cut(s)	179, 492, 1055, 1593
HpyCH4V	TGCA	8 cut(s)	131, 604, 656, 1018, 1178, 1361, 1396, 1525
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1178, 1184, 1187, 1427
HpyF3I	CTNAG	4 cut(s)	249, 750, 864, 981
HpySE526I	ACGT	4 cut(s)	179, 492, 1055, 1593
Hsp92II	CATG	8 cut(s)	116, 746, 803, 1022, 1153, 1221, 1567, 1580
HspAI	GCGC	1 cut(s)	1087
Ksp22I	TGATCA	1 cut(s)	1459
Kzo9I	GATC	5 cut(s)	223, 420, 874, 1459, 1560
LguI	GCTCTTC	1 cut(s)	725
LmnI	GCTCC	7 cut(s)	16, 42, 153, 746, 889, 1427, 1555
Lsp1109I	GCAGC	8 cut(s)	1123, 1159, 1162, 1174, 1190, 1393, 1420, 1442
LweI	GCATC	5 cut(s)	548, 1096, 1174, 1228, 1348
MaeI	CTAG	6 cut(s)	87, 165, 231, 927, 1110, 1659
MaeII	ACGT	4 cut(s)	179, 492, 1055, 1593
MalI	GATC	5 cut(s)	225, 422, 876, 1461, 1562
MbiI	CCGCTC	2 cut(s)	37, 735
MboI	GATC	5 cut(s)	223, 420, 874, 1459, 1560
MboII	GAAGA	7 cut(s)	580, 742, 966, 1357, 1579, 1601, 1610
MflI	RGATCY	2 cut(s)	223, 420
MhlI	GDGCHC	3 cut(s)	60, 158, 1071
MlyI	GAGTC	4 cut(s)	163, 417, 1360, 1640
MmeI	TCCRAC	1 cut(s)	64
MroXI	GAANNNNTTC	1 cut(s)	1602
MseI	TTAA	7 cut(s)	207, 300, 327, 450, 713, 1125, 1623
MslI	CAYNNNNRTG	3 cut(s)	117, 804, 982
MspA1I	CMGCKG	3 cut(s)	1172, 1181, 1433
MspI	CCGG	5 cut(s)	23, 44, 369, 471, 1650
MspR9I	CCNGG	3 cut(s)	23, 24, 370
MwoI	GCNNNNNNNGC	4 cut(s)	1178, 1184, 1187, 1427
NciI	CCSGG	3 cut(s)	23, 24, 370
NcoI	CCATGG	1 cut(s)	1149
NdeII	GATC	5 cut(s)	223, 420, 874, 1459, 1560
NlaIII	CATG	8 cut(s)	116, 746, 803, 1022, 1153, 1221, 1567, 1580
NlaIV	GGNNCC	5 cut(s)	225, 422, 815, 1069, 1070
NspI	RCATGY	1 cut(s)	1580
PagI	TCATGA	2 cut(s)	112, 1563
PciSI	GCTCTTC	1 cut(s)	725
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PdmI	GAANNNNTTC	1 cut(s)	1602
PfeI	GAWTC	7 cut(s)	109, 611, 761, 785, 1250, 1316, 1343
PkrI	GCNGC	8 cut(s)	1138, 1174, 1177, 1180, 1189, 1408, 1432, 1435
PleI	GAGTC	4 cut(s)	163, 416, 1359, 1640
PpsI	GAGTC	4 cut(s)	163, 416, 1359, 1640
PpuMI	RGGWCCY	1 cut(s)	814
PshBI	ATTAAT	3 cut(s)	207, 327, 1623
Psp124BI	GAGCTC	2 cut(s)	60, 158
Psp5II	RGGWCCY	1 cut(s)	814
PspN4I	GGNNCC	5 cut(s)	225, 422, 815, 1069, 1070
PspOMI	GGGCCC	1 cut(s)	1067
PspPI	GGNCC	4 cut(s)	814, 1067, 1068, 1157
PspPPI	RGGWCCY	1 cut(s)	814
PstI	CTGCAG	1 cut(s)	1180
PstNI	CAGNNNCTG	1 cut(s)	1175
PsuI	RGATCY	2 cut(s)	223, 420
PvuII	CAGCTG	3 cut(s)	1172, 1181, 1433
RsaI	GTAC	3 cut(s)	182, 1611, 1656
RsaNI	GTAC	3 cut(s)	181, 1610, 1655
RseI	CAYNNNNRTG	3 cut(s)	117, 804, 982
SacI	GAGCTC	2 cut(s)	60, 158
SapI	GCTCTTC	1 cut(s)	725
SaqAI	TTAA	7 cut(s)	207, 300, 327, 450, 713, 1125, 1623
SatI	GCNGC	8 cut(s)	1137, 1173, 1176, 1179, 1188, 1407, 1431, 1434
Sau3AI	GATC	5 cut(s)	223, 420, 874, 1459, 1560
Sau96I	GGNCC	4 cut(s)	814, 1067, 1068, 1157
SchI	GAGTC	4 cut(s)	163, 417, 1360, 1640
ScrFI	CCNGG	3 cut(s)	23, 24, 370
SduI	GDGCHC	3 cut(s)	60, 158, 1071
SfaNI	GCATC	5 cut(s)	548, 1096, 1174, 1228, 1348
SfcI	CTRYAG	3 cut(s)	190, 910, 1176
SinI	GGWCC	2 cut(s)	814, 1157
SmaI	CCCGGG	1 cut(s)	24
SmiMI	CAYNNNNRTG	3 cut(s)	117, 804, 982
SsiI	CCGC	4 cut(s)	35, 351, 501, 735
SspMI	CTAG	6 cut(s)	87, 165, 231, 927, 1110, 1659
SstI	GAGCTC	2 cut(s)	60, 158
StyD4I	CCNGG	3 cut(s)	21, 22, 368
StyI	CCWWGG	1 cut(s)	1149
TaaI	ACNGT	4 cut(s)	596, 953, 1010, 1289
TaiI	ACGT	4 cut(s)	182, 495, 1058, 1596
TaqI	TCGA	3 cut(s)	60, 158, 1402
TfiI	GAWTC	7 cut(s)	109, 611, 761, 785, 1250, 1316, 1343
Tru1I	TTAA	7 cut(s)	207, 300, 327, 450, 713, 1125, 1623
Tru9I	TTAA	7 cut(s)	207, 300, 327, 450, 713, 1125, 1623
TscAI	CASTG	3 cut(s)	253, 1096, 1125
TseI	GCWGC	8 cut(s)	1136, 1172, 1175, 1178, 1187, 1406, 1430, 1433
TspDTI	ATGAA	7 cut(s)	101, 129, 278, 966, 1340, 1529, 1580
TspGWI	ACGGA	2 cut(s)	1043, 1633
TspMI	CCCGGG	1 cut(s)	22
TspRI	CASTG	3 cut(s)	253, 1096, 1125
VpaK11BI	GGWCC	2 cut(s)	814, 1157
VspI	ATTAAT	3 cut(s)	207, 327, 1623
XapI	RAATTY	3 cut(s)	340, 442, 848
XbaI	TCTAGA	1 cut(s)	86
XceI	RCATGY	1 cut(s)	1580
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1147
XmaI	CCCGGG	1 cut(s)	22
XmnI	GAANNNNTTC	1 cut(s)	1602
XspI	CTAG	6 cut(s)	87, 165, 231, 927, 1110, 1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.