SWI SNF complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47620 AT2G47620 |
| fragaria_vesca | FvH4_5g08750 FvH4_5g08750 |
| malus_domestica | MD06G1137800.v1.1 MD14G1152600.v1.1 |
| prunus_persica | Prupe.5G147600_v2.0.a1 Prupe.5G147600_v2.0.a1 |
| pyrus_communis | pycom06g12900 pycom14g12700 |
| rosa_chinensis | RchiOBHm_Chr7g0189531 |
| rosa_laevigata | RLG00000004603 |
| rosa_multiflora | Rmu_co8438941.1_g000001 Rmu_sc0001924.1_g000010 Rmu_sc0009639.1_g000010 Rmu_sc0042771.1_g000001 |
| rosa_rugosa | Rorug06G0498800 |
| rosa_samantha | Rh7AG103700 Rh7BG106400 Rh7CG108500 Rh7DG105800 |
| rosa_wichuraiana | Rw7G008950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 1618 |
| AciI | CCGC | 3 cut(s) | 1176, 1278, 1618 |
| AclWI | GGATC | 4 cut(s) | 415, 428, 1068, 1677 |
| AcoI | YGGCCR | 1 cut(s) | 1455 |
| AcsI | RAATTY | 3 cut(s) | 340, 442, 848 |
| AcuI | CTGAAG | 2 cut(s) | 815, 939 |
| AdeI | CACNNNGTG | 1 cut(s) | 1205 |
| AfaI | GTAC | 4 cut(s) | 143, 215, 739, 1656 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 485, 1503 |
| Alw21I | GWGCWC | 2 cut(s) | 60, 1582 |
| Alw26I | GTCTC | 2 cut(s) | 1278, 1286 |
| AlwI | GGATC | 4 cut(s) | 415, 428, 1068, 1677 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1436 |
| Ama87I | CYCGRG | 1 cut(s) | 22 |
| AoxI | GGCC | 2 cut(s) | 1334, 1455 |
| ApoI | RAATTY | 3 cut(s) | 340, 442, 848 |
| AseI | ATTAAT | 1 cut(s) | 327 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 789 |
| AspLEI | GCGC | 2 cut(s) | 963, 1089 |
| AspS9I | GGNCC | 2 cut(s) | 409, 1157 |
| AsuC2I | CCSGG | 2 cut(s) | 23, 24 |
| AsuHPI | GGTGA | 4 cut(s) | 284, 386, 650, 1322 |
| AvaI | CYCGRG | 1 cut(s) | 22 |
| AvaII | GGWCC | 2 cut(s) | 409, 1157 |
| BamHI | GGATCC | 1 cut(s) | 420 |
| BanII | GRGCYC | 1 cut(s) | 60 |
| BbsI | GAAGAC | 1 cut(s) | 228 |
| Bbv12I | GWGCWC | 2 cut(s) | 60, 1582 |
| BbvCI | CCTCAGC | 1 cut(s) | 1182 |
| BccI | CCATC | 3 cut(s) | 143, 398, 1656 |
| BceAI | ACGGC | 1 cut(s) | 1175 |
| BclI | TGATCA | 1 cut(s) | 1560 |
| BcnI | CCSGG | 2 cut(s) | 23, 24 |
| BcoDI | GTCTC | 2 cut(s) | 1278, 1286 |
| BfaI | CTAG | 6 cut(s) | 87, 231, 927, 1110, 1607, 1659 |
| BfmI | CTRYAG | 1 cut(s) | 910 |
| BglII | AGATCT | 1 cut(s) | 1549 |
| BlpI | GCTNAGC | 1 cut(s) | 864 |
| BmcAI | AGTACT | 1 cut(s) | 143 |
| Bme1390I | CCNGG | 2 cut(s) | 23, 24 |
| Bme18I | GGWCC | 2 cut(s) | 409, 1157 |
| BmeT110I | CYCGRG | 1 cut(s) | 22 |
| BmgT120I | GGNCC | 2 cut(s) | 409, 1157 |
| BmiI | GGNNCC | 4 cut(s) | 410, 411, 422, 528 |
| BmrFI | CCNGG | 2 cut(s) | 23, 24 |
| BmsI | GCATC | 4 cut(s) | 426, 481, 545, 1096 |
| BpiI | GAAGAC | 1 cut(s) | 228 |
| BpmI | CTGGAG | 1 cut(s) | 1574 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1182 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 864 |
| BpuEI | CTTGAG | 1 cut(s) | 1520 |
| BpuMI | CCSGG | 2 cut(s) | 23, 24 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1625 |
| BsaI | GGTCTC | 1 cut(s) | 1278 |
| BsaJI | CCNNGG | 2 cut(s) | 22, 1149 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 511, 541, 563, 593, 881, 911 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 485, 1503 |
| Bse1I | ACTGG | 1 cut(s) | 619 |
| Bse3DI | GCAATG | 1 cut(s) | 1089 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1625 |
| BseDI | CCNNGG | 2 cut(s) | 22, 1149 |
| BseGI | GGATG | 8 cut(s) | 109, 409, 496, 706, 811, 1111, 1626, 1672 |
| BseJI | GATNNNNATC | 1 cut(s) | 1625 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 485, 1503 |
| BseMI | GCAATG | 1 cut(s) | 1089 |
| BseMII | CTCAG | 4 cut(s) | 111, 240, 839, 1173 |
| BseNI | ACTGG | 1 cut(s) | 619 |
| BseRI | GAGGAG | 1 cut(s) | 587 |
| BseYI | CCCAGC | 2 cut(s) | 485, 494 |
| BshFI | GGCC | 2 cut(s) | 1336, 1457 |
| BsiHKAI | GWGCWC | 2 cut(s) | 60, 1582 |
| BsiHKCI | CYCGRG | 1 cut(s) | 22 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BslFI | GGGAC | 3 cut(s) | 209, 395, 1519 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 485, 1503 |
| BsmAI | GTCTC | 2 cut(s) | 1278, 1286 |
| BsmFI | GGGAC | 3 cut(s) | 209, 395, 1519 |
| BsmI | GAATGC | 1 cut(s) | 963 |
| BsnI | GGCC | 2 cut(s) | 1336, 1457 |
| Bso31I | GGTCTC | 1 cut(s) | 1278 |
| BsoBI | CYCGRG | 1 cut(s) | 22 |
| Bsp1286I | GDGCHC | 2 cut(s) | 60, 1582 |
| Bsp143I | GATC | 8 cut(s) | 420, 874, 948, 1060, 1459, 1549, 1560, 1669 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 864 |
| Bsp19I | CCATGG | 1 cut(s) | 1149 |
| BspACI | CCGC | 3 cut(s) | 1176, 1278, 1618 |
| BspANI | GGCC | 2 cut(s) | 1336, 1457 |
| BspCNI | CTCAG | 4 cut(s) | 112, 241, 838, 1174 |
| BspHI | TCATGA | 1 cut(s) | 112 |
| BspLI | GGNNCC | 4 cut(s) | 410, 411, 422, 528 |
| BspPI | GGATC | 4 cut(s) | 415, 428, 1068, 1677 |
| BspQI | GCTCTTC | 1 cut(s) | 1608 |
| BspTNI | GGTCTC | 1 cut(s) | 1278 |
| BsrBI | CCGCTC | 1 cut(s) | 1618 |
| BsrDI | GCAATG | 1 cut(s) | 1089 |
| BsrI | ACTGG | 1 cut(s) | 619 |
| BssECI | CCNNGG | 2 cut(s) | 22, 1149 |
| BssMI | GATC | 8 cut(s) | 420, 874, 948, 1060, 1459, 1549, 1560, 1669 |
| BssT1I | CCWWGG | 1 cut(s) | 1149 |
| Bst4CI | ACNGT | 2 cut(s) | 356, 997 |
| Bst6I | CTCTTC | 3 cut(s) | 372, 958, 1608 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1436 |
| BstC8I | GCNNGC | 2 cut(s) | 1040, 1359 |
| BstDEI | CTNAG | 6 cut(s) | 120, 249, 387, 825, 864, 1182 |
| BstDSI | CCRYGG | 1 cut(s) | 1149 |
| BstF5I | GGATG | 8 cut(s) | 109, 409, 496, 706, 811, 1111, 1626, 1672 |
| BstHHI | GCGC | 2 cut(s) | 963, 1089 |
| BstKTI | GATC | 8 cut(s) | 423, 877, 951, 1063, 1462, 1552, 1563, 1672 |
| BstMAI | GTCTC | 2 cut(s) | 1278, 1286 |
| BstMBI | GATC | 8 cut(s) | 420, 874, 948, 1060, 1459, 1549, 1560, 1669 |
| BstNSI | RCATGY | 1 cut(s) | 1361 |
| BstSCI | CCNGG | 2 cut(s) | 21, 22 |
| BstSFI | CTRYAG | 1 cut(s) | 910 |
| BstV2I | GAAGAC | 1 cut(s) | 228 |
| BstX2I | RGATCY | 2 cut(s) | 420, 1549 |
| BstYI | RGATCY | 2 cut(s) | 420, 1549 |
| BsuRI | GGCC | 2 cut(s) | 1336, 1457 |
| BtgI | CCRYGG | 1 cut(s) | 1149 |
| BtgZI | GCGATG | 1 cut(s) | 449 |
| BtsCI | GGATG | 8 cut(s) | 109, 409, 496, 706, 811, 1111, 1626, 1672 |
| BtsIMutI | CAGTG | 3 cut(s) | 246, 340, 1118 |
| Cac8I | GCNNGC | 2 cut(s) | 1040, 1359 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1436 |
| CciI | TCATGA | 1 cut(s) | 112 |
| CfoI | GCGC | 2 cut(s) | 963, 1089 |
| Cfr13I | GGNCC | 2 cut(s) | 409, 1157 |
| Cfr9I | CCCGGG | 1 cut(s) | 22 |
| CseI | GACGC | 1 cut(s) | 1516 |
| Csp6I | GTAC | 4 cut(s) | 142, 214, 738, 1655 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 580, 615 |
| CviAII | CATG | 6 cut(s) | 113, 800, 1019, 1150, 1307, 1358 |
| CviQI | GTAC | 4 cut(s) | 142, 214, 738, 1655 |
| DdeI | CTNAG | 6 cut(s) | 120, 249, 387, 825, 864, 1182 |
| DpnI | GATC | 8 cut(s) | 422, 876, 950, 1062, 1461, 1551, 1562, 1671 |
| DpnII | GATC | 8 cut(s) | 420, 874, 948, 1060, 1459, 1549, 1560, 1669 |
| DraI | TTTAAA | 3 cut(s) | 564, 1369, 1683 |
| DraIII | CACNNNGTG | 1 cut(s) | 1205 |
| EaeI | YGGCCR | 1 cut(s) | 1455 |
| Eam1104I | CTCTTC | 3 cut(s) | 372, 958, 1608 |
| EarI | CTCTTC | 3 cut(s) | 372, 958, 1608 |
| Ecl136II | GAGCTC | 1 cut(s) | 58 |
| Eco130I | CCWWGG | 1 cut(s) | 1149 |
| Eco24I | GRGCYC | 1 cut(s) | 60 |
| Eco31I | GGTCTC | 1 cut(s) | 1278 |
| Eco47I | GGWCC | 2 cut(s) | 409, 1157 |
| Eco53kI | GAGCTC | 1 cut(s) | 58 |
| Eco57I | CTGAAG | 2 cut(s) | 815, 939 |
| Eco88I | CYCGRG | 1 cut(s) | 22 |
| EcoICRI | GAGCTC | 1 cut(s) | 58 |
| EcoO109I | RGGNCCY | 1 cut(s) | 409 |
| EcoRI | GAATTC | 1 cut(s) | 442 |
| EcoT14I | CCWWGG | 1 cut(s) | 1149 |
| EcoT38I | GRGCYC | 1 cut(s) | 60 |
| ErhI | CCWWGG | 1 cut(s) | 1149 |
| FaeI | CATG | 6 cut(s) | 116, 803, 1022, 1153, 1310, 1361 |
| FaqI | GGGAC | 3 cut(s) | 209, 395, 1519 |
| FatI | CATG | 6 cut(s) | 112, 799, 1018, 1149, 1306, 1357 |
| FauI | CCCGC | 1 cut(s) | 1285 |
| FbaI | TGATCA | 1 cut(s) | 1560 |
| FokI | GGATG | 8 cut(s) | 116, 416, 503, 713, 818, 1118, 1633, 1659 |
| FriOI | GRGCYC | 1 cut(s) | 60 |
| FspBI | CTAG | 6 cut(s) | 87, 231, 927, 1110, 1607, 1659 |
| GlaI | GCGC | 2 cut(s) | 962, 1088 |
| GsaI | CCCAGC | 2 cut(s) | 489, 498 |
| GsuI | CTGGAG | 1 cut(s) | 1574 |
| HaeIII | GGCC | 2 cut(s) | 1336, 1457 |
| HapII | CCGG | 1 cut(s) | 23 |
| HgaI | GACGC | 1 cut(s) | 1516 |
| HhaI | GCGC | 2 cut(s) | 963, 1089 |
| Hin1II | CATG | 6 cut(s) | 116, 803, 1022, 1153, 1310, 1361 |
| Hin6I | GCGC | 2 cut(s) | 961, 1087 |
| HinP1I | GCGC | 2 cut(s) | 961, 1087 |
| HincII | GTYRAC | 1 cut(s) | 352 |
| HindII | GTYRAC | 1 cut(s) | 352 |
| HinfI | GANTC | 8 cut(s) | 109, 516, 761, 785, 1250, 1316, 1351, 1646 |
| HpaII | CCGG | 1 cut(s) | 23 |
| HphI | GGTGA | 4 cut(s) | 284, 386, 650, 1322 |
| Hpy166II | GTNNAC | 6 cut(s) | 352, 602, 756, 1118, 1160, 1655 |
| Hpy188III | TCNNGA | 8 cut(s) | 113, 165, 989, 1064, 1463, 1553, 1564, 1689 |
| Hpy8I | GTNNAC | 6 cut(s) | 352, 602, 756, 1118, 1160, 1655 |
| Hpy99I | CGWCG | 1 cut(s) | 50 |
| HpyAV | CCTTC | 5 cut(s) | 237, 562, 1321, 1564, 1686 |
| HpyCH4III | ACNGT | 2 cut(s) | 356, 997 |
| HpyCH4V | TGCA | 9 cut(s) | 11, 338, 654, 1018, 1038, 1199, 1361, 1396, 1525 |
| HpyF3I | CTNAG | 6 cut(s) | 120, 249, 387, 825, 864, 1182 |
| Hsp92II | CATG | 6 cut(s) | 116, 803, 1022, 1153, 1310, 1361 |
| HspAI | GCGC | 2 cut(s) | 961, 1087 |
| KflI | GGGWCCC | 1 cut(s) | 409 |
| Ksp22I | TGATCA | 1 cut(s) | 1560 |
| Kzo9I | GATC | 8 cut(s) | 420, 874, 948, 1060, 1459, 1549, 1560, 1669 |
| LguI | GCTCTTC | 1 cut(s) | 1608 |
| LmnI | GCTCC | 7 cut(s) | 42, 291, 478, 532, 889, 1427, 1555 |
| LweI | GCATC | 4 cut(s) | 426, 481, 545, 1096 |
| MaeI | CTAG | 6 cut(s) | 87, 231, 927, 1110, 1607, 1659 |
| MaeIII | GTNAC | 1 cut(s) | 261 |
| MalI | GATC | 8 cut(s) | 422, 876, 950, 1062, 1461, 1551, 1562, 1671 |
| MbiI | CCGCTC | 1 cut(s) | 1618 |
| MboI | GATC | 8 cut(s) | 420, 874, 948, 1060, 1459, 1549, 1560, 1669 |
| MfeI | CAATTG | 2 cut(s) | 592, 723 |
| MflI | RGATCY | 2 cut(s) | 420, 1549 |
| MhlI | GDGCHC | 2 cut(s) | 60, 1582 |
| MlyI | GAGTC | 1 cut(s) | 1360 |
| MmeI | TCCRAC | 2 cut(s) | 64, 1412 |
| MroXI | GAANNNNTTC | 1 cut(s) | 789 |
| MslI | CAYNNNNRTG | 2 cut(s) | 804, 982 |
| MspA1I | CMGCKG | 2 cut(s) | 1181, 1433 |
| MspI | CCGG | 1 cut(s) | 23 |
| MspR9I | CCNGG | 2 cut(s) | 23, 24 |
| MunI | CAATTG | 2 cut(s) | 592, 723 |
| Mva1269I | GAATGC | 1 cut(s) | 963 |
| NciI | CCSGG | 2 cut(s) | 23, 24 |
| NcoI | CCATGG | 1 cut(s) | 1149 |
| NdeII | GATC | 8 cut(s) | 420, 874, 948, 1060, 1459, 1549, 1560, 1669 |
| NlaIII | CATG | 6 cut(s) | 116, 803, 1022, 1153, 1310, 1361 |
| NlaIV | GGNNCC | 4 cut(s) | 410, 411, 422, 528 |
| NmuCI | GTSAC | 1 cut(s) | 261 |
| NspI | RCATGY | 1 cut(s) | 1361 |
| PaeI | GCATGC | 1 cut(s) | 1361 |
| PagI | TCATGA | 1 cut(s) | 112 |
| PciSI | GCTCTTC | 1 cut(s) | 1608 |
| PctI | GAATGC | 1 cut(s) | 963 |
| PdmI | GAANNNNTTC | 1 cut(s) | 789 |
| PfeI | GAWTC | 7 cut(s) | 109, 516, 761, 785, 1250, 1316, 1646 |
| PleI | GAGTC | 1 cut(s) | 1359 |
| PpsI | GAGTC | 1 cut(s) | 1359 |
| PpuMI | RGGWCCY | 1 cut(s) | 409 |
| PshBI | ATTAAT | 1 cut(s) | 327 |
| Psp124BI | GAGCTC | 1 cut(s) | 60 |
| Psp5II | RGGWCCY | 1 cut(s) | 409 |
| PspFI | CCCAGC | 2 cut(s) | 485, 494 |
| PspN4I | GGNNCC | 4 cut(s) | 410, 411, 422, 528 |
| PspPI | GGNCC | 2 cut(s) | 409, 1157 |
| PspPPI | RGGWCCY | 1 cut(s) | 409 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1436 |
| PsuI | RGATCY | 2 cut(s) | 420, 1549 |
| PvuII | CAGCTG | 2 cut(s) | 1181, 1433 |
| RsaI | GTAC | 4 cut(s) | 143, 215, 739, 1656 |
| RsaNI | GTAC | 4 cut(s) | 142, 214, 738, 1655 |
| RseI | CAYNNNNRTG | 2 cut(s) | 804, 982 |
| SacI | GAGCTC | 1 cut(s) | 60 |
| SapI | GCTCTTC | 1 cut(s) | 1608 |
| Sau3AI | GATC | 8 cut(s) | 420, 874, 948, 1060, 1459, 1549, 1560, 1669 |
| Sau96I | GGNCC | 2 cut(s) | 409, 1157 |
| ScaI | AGTACT | 1 cut(s) | 143 |
| SchI | GAGTC | 1 cut(s) | 1360 |
| ScrFI | CCNGG | 2 cut(s) | 23, 24 |
| SduI | GDGCHC | 2 cut(s) | 60, 1582 |
| SfaNI | GCATC | 4 cut(s) | 426, 481, 545, 1096 |
| SfcI | CTRYAG | 1 cut(s) | 910 |
| SinI | GGWCC | 2 cut(s) | 409, 1157 |
| SmaI | CCCGGG | 1 cut(s) | 24 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 804, 982 |
| SmlI | CTYRAG | 1 cut(s) | 1535 |
| SmoI | CTYRAG | 1 cut(s) | 1535 |
| SphI | GCATGC | 1 cut(s) | 1361 |
| SsiI | CCGC | 3 cut(s) | 1176, 1278, 1618 |
| SspMI | CTAG | 6 cut(s) | 87, 231, 927, 1110, 1607, 1659 |
| SstI | GAGCTC | 1 cut(s) | 60 |
| StyD4I | CCNGG | 2 cut(s) | 21, 22 |
| StyI | CCWWGG | 1 cut(s) | 1149 |
| TaaI | ACNGT | 2 cut(s) | 356, 997 |
| TaqI | TCGA | 4 cut(s) | 60, 147, 999, 1587 |
| TatI | WGTACW | 2 cut(s) | 141, 213 |
| TauI | GCSGC | 1 cut(s) | 1178 |
| TfiI | GAWTC | 7 cut(s) | 109, 516, 761, 785, 1250, 1316, 1646 |
| TscAI | CASTG | 3 cut(s) | 253, 340, 1125 |
| TseFI | GTSAC | 1 cut(s) | 261 |
| Tsp45I | GTSAC | 1 cut(s) | 261 |
| TspDTI | ATGAA | 7 cut(s) | 101, 129, 966, 1295, 1340, 1529, 1637 |
| TspGWI | ACGGA | 3 cut(s) | 413, 519, 759 |
| TspMI | CCCGGG | 1 cut(s) | 22 |
| TspRI | CASTG | 3 cut(s) | 253, 340, 1125 |
| VpaK11BI | GGWCC | 2 cut(s) | 409, 1157 |
| VspI | ATTAAT | 1 cut(s) | 327 |
| XapI | RAATTY | 3 cut(s) | 340, 442, 848 |
| XceI | RCATGY | 1 cut(s) | 1361 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1147 |
| XmaI | CCCGGG | 1 cut(s) | 22 |
| XmnI | GAANNNNTTC | 1 cut(s) | 789 |
| XspI | CTAG | 6 cut(s) | 87, 231, 927, 1110, 1607, 1659 |
| ZrmI | AGTACT | 1 cut(s) | 143 |