Prupe.5G147600_v2.0.a1
MYB Family

SWI SNF complex subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
13533112 .. 13536431
3320 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G147600.2

Sequence Viewer

Length: 1692 bp
ATGGAACTTGCACCACACGACCCGGGTTCTAAACTGCTCCGACCCGACGAACCAGAGCTCGACCTCTACACCATTCCAAGCCACTCTAGCTGGTTTTCGTGGGATGAGATTCATGAAACTGAGAGAATTGCTTTGAAAGAGTACTTCGATGGAAGCTCAATTTCAAGAACGCCAAAAACATACAAGGAATACAGGGACTTTATTGTTAGTAAGTACAGAGAAGACCCTTCTAGGAAACTCACATTCACTGAGGTTAGAAAGTCACTTGTGGGTGATGTTAGTTTGCTCCACAAGGTATTTAATTTCTTGGAGAAGTGGGGTTTGATTAATTTCAGTGCAAATTTGGGTGTCAACGGTGGTTTTGGCATTGAGGGTGAAGAGAGGTCTAAGGTTAAGGTTGAGGATGGGGTCCCCAATGGGATCCGTGTGGCTGCGATGCCGAATTCAATTAAACCAATTTTACCCATTTCAGCTCCCCCTAAAGCTGGGGATGCTGGGGGTGGAGTTGTGAATAGAATCACTTTGGCTCCGTTGGCATCATATTCTGATGTTTTTGGTGGTTTAAAGAAGGAGGAGGGGTTGGTTTGTGGCAATTGTGGTGGACATTGTGAAACTGGACACTACAAGTATAGCAAGGGTGATTTTCTAATTTGCATAAAATGTTTTGAAAATGGGAACTATGGGGAGAACAAATTGAGGGATGATTTCAAGTTAAATGAGGCAATTGAAAAGAGTGGTACTAACGGAGTGGAGTGGACTGAATCTGAAACTCTACTACTTTTAGAATCTGTTCTGAAGCATGGGGATGATTGGGAGTTTGTTGCTCAGAATGTTCAGACCAAGACGAAATTTGATTGTATTGCTAAGCTCATTGATCTGCCTTTTGGGGAGCTTGTGTTGGGTTCTGCCTACAGAAAAGGCAATCCTAGCAGCTTTAGTGGTAATTTGATCTCTTCAGAGCGCATTCAGTTATCTTCATCTGAATGTCAAGATACTGTCGAAACCAATGGTCAGTTGCATGAGCAGACAGATGACTGCAAGCAGAATGGAGATATTTTGGATCAAGACCCACCTTTGAAAAGGCAGCGCATTGCTTCCCTTTCGGATGCTAGTAGTTCACTGATTAAACAGGTAGCTGCCATAACAACCATGGTTGGTCCACATATTACATCTGCCGCAGCTGAGGCTGCCGTTAATGCACTTTGTGAAGAAACCTCTTGTTCAAGGGAGATATTTAATGCTGACGATGATTCTATTCCTAATGGCTTGTGGTCTCCCGCTAAAAATTGTGAGACAGAGAGAGTTCATGGTGAGGATTCTGAAATGAAGGAAAGGCCAACTCAATCAGAGAGTCGGCATGCAATCTTTAAAAAAGACGACATACCTCCAACTTTGCAAATTAGAGCTGCCATTGGAACAGCTCTTGGAGCAGCTGCTGCTCACGCAAAATTATTGGCCGATCAGGAGGATAGACAGATTGAACATCTAATGGCAACCATAATTGGGACGCAGATGAAGAAGTTGCACAGCAAACTCAAGCATTTTGAAGATCTGGAGCTGATCAGGAAGAAGGAATGTGCTCAAATCGAAGAAGTAGAGGATATTCTAGTTGAAGAGCGGATGAATATCTTACAGAGGACATTTGATTCTGGTGTACCTAGATGGAGGGATCATCCTTCTTTAAAATCTTGA

Protein Analysis

564

Amino Acids

62.45

Weight (kDa)

5.28

Isoelectric Point (pI)

39.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1618
AciI CCGC 3 cut(s) 1176, 1278, 1618
AclWI GGATC 4 cut(s) 415, 428, 1068, 1677
AcoI YGGCCR 1 cut(s) 1455
AcsI RAATTY 3 cut(s) 340, 442, 848
AcuI CTGAAG 2 cut(s) 815, 939
AdeI CACNNNGTG 1 cut(s) 1205
AfaI GTAC 4 cut(s) 143, 215, 739, 1656
AfiI CCNNNNNNNGG 2 cut(s) 485, 1503
Alw21I GWGCWC 2 cut(s) 60, 1582
Alw26I GTCTC 2 cut(s) 1278, 1286
AlwI GGATC 4 cut(s) 415, 428, 1068, 1677
AlwNI CAGNNNCTG 1 cut(s) 1436
Ama87I CYCGRG 1 cut(s) 22
AoxI GGCC 2 cut(s) 1334, 1455
ApoI RAATTY 3 cut(s) 340, 442, 848
AseI ATTAAT 1 cut(s) 327
Asp700I GAANNNNTTC 1 cut(s) 789
AspLEI GCGC 2 cut(s) 963, 1089
AspS9I GGNCC 2 cut(s) 409, 1157
AsuC2I CCSGG 2 cut(s) 23, 24
AsuHPI GGTGA 4 cut(s) 284, 386, 650, 1322
AvaI CYCGRG 1 cut(s) 22
AvaII GGWCC 2 cut(s) 409, 1157
BamHI GGATCC 1 cut(s) 420
BanII GRGCYC 1 cut(s) 60
BbsI GAAGAC 1 cut(s) 228
Bbv12I GWGCWC 2 cut(s) 60, 1582
BbvCI CCTCAGC 1 cut(s) 1182
BccI CCATC 3 cut(s) 143, 398, 1656
BceAI ACGGC 1 cut(s) 1175
BclI TGATCA 1 cut(s) 1560
BcnI CCSGG 2 cut(s) 23, 24
BcoDI GTCTC 2 cut(s) 1278, 1286
BfaI CTAG 6 cut(s) 87, 231, 927, 1110, 1607, 1659
BfmI CTRYAG 1 cut(s) 910
BglII AGATCT 1 cut(s) 1549
BlpI GCTNAGC 1 cut(s) 864
BmcAI AGTACT 1 cut(s) 143
Bme1390I CCNGG 2 cut(s) 23, 24
Bme18I GGWCC 2 cut(s) 409, 1157
BmeT110I CYCGRG 1 cut(s) 22
BmgT120I GGNCC 2 cut(s) 409, 1157
BmiI GGNNCC 4 cut(s) 410, 411, 422, 528
BmrFI CCNGG 2 cut(s) 23, 24
BmsI GCATC 4 cut(s) 426, 481, 545, 1096
BpiI GAAGAC 1 cut(s) 228
BpmI CTGGAG 1 cut(s) 1574
Bpu10I CCTNAGC 1 cut(s) 1182
Bpu1102I GCTNAGC 1 cut(s) 864
BpuEI CTTGAG 1 cut(s) 1520
BpuMI CCSGG 2 cut(s) 23, 24
BsaBI GATNNNNATC 1 cut(s) 1625
BsaI GGTCTC 1 cut(s) 1278
BsaJI CCNNGG 2 cut(s) 22, 1149
BsaXI ACNNNNNCTCC 6 cut(s) 511, 541, 563, 593, 881, 911
Bsc4I CCNNNNNNNGG 2 cut(s) 485, 1503
Bse1I ACTGG 1 cut(s) 619
Bse3DI GCAATG 1 cut(s) 1089
Bse8I GATNNNNATC 1 cut(s) 1625
BseDI CCNNGG 2 cut(s) 22, 1149
BseGI GGATG 8 cut(s) 109, 409, 496, 706, 811, 1111, 1626, 1672
BseJI GATNNNNATC 1 cut(s) 1625
BseLI CCNNNNNNNGG 2 cut(s) 485, 1503
BseMI GCAATG 1 cut(s) 1089
BseMII CTCAG 4 cut(s) 111, 240, 839, 1173
BseNI ACTGG 1 cut(s) 619
BseRI GAGGAG 1 cut(s) 587
BseYI CCCAGC 2 cut(s) 485, 494
BshFI GGCC 2 cut(s) 1336, 1457
BsiHKAI GWGCWC 2 cut(s) 60, 1582
BsiHKCI CYCGRG 1 cut(s) 22
BsiSI CCGG 1 cut(s) 23
BslFI GGGAC 3 cut(s) 209, 395, 1519
BslI CCNNNNNNNGG 2 cut(s) 485, 1503
BsmAI GTCTC 2 cut(s) 1278, 1286
BsmFI GGGAC 3 cut(s) 209, 395, 1519
BsmI GAATGC 1 cut(s) 963
BsnI GGCC 2 cut(s) 1336, 1457
Bso31I GGTCTC 1 cut(s) 1278
BsoBI CYCGRG 1 cut(s) 22
Bsp1286I GDGCHC 2 cut(s) 60, 1582
Bsp143I GATC 8 cut(s) 420, 874, 948, 1060, 1459, 1549, 1560, 1669
Bsp1720I GCTNAGC 1 cut(s) 864
Bsp19I CCATGG 1 cut(s) 1149
BspACI CCGC 3 cut(s) 1176, 1278, 1618
BspANI GGCC 2 cut(s) 1336, 1457
BspCNI CTCAG 4 cut(s) 112, 241, 838, 1174
BspHI TCATGA 1 cut(s) 112
BspLI GGNNCC 4 cut(s) 410, 411, 422, 528
BspPI GGATC 4 cut(s) 415, 428, 1068, 1677
BspQI GCTCTTC 1 cut(s) 1608
BspTNI GGTCTC 1 cut(s) 1278
BsrBI CCGCTC 1 cut(s) 1618
BsrDI GCAATG 1 cut(s) 1089
BsrI ACTGG 1 cut(s) 619
BssECI CCNNGG 2 cut(s) 22, 1149
BssMI GATC 8 cut(s) 420, 874, 948, 1060, 1459, 1549, 1560, 1669
BssT1I CCWWGG 1 cut(s) 1149
Bst4CI ACNGT 2 cut(s) 356, 997
Bst6I CTCTTC 3 cut(s) 372, 958, 1608
BstAPI GCANNNNNTGC 1 cut(s) 1436
BstC8I GCNNGC 2 cut(s) 1040, 1359
BstDEI CTNAG 6 cut(s) 120, 249, 387, 825, 864, 1182
BstDSI CCRYGG 1 cut(s) 1149
BstF5I GGATG 8 cut(s) 109, 409, 496, 706, 811, 1111, 1626, 1672
BstHHI GCGC 2 cut(s) 963, 1089
BstKTI GATC 8 cut(s) 423, 877, 951, 1063, 1462, 1552, 1563, 1672
BstMAI GTCTC 2 cut(s) 1278, 1286
BstMBI GATC 8 cut(s) 420, 874, 948, 1060, 1459, 1549, 1560, 1669
BstNSI RCATGY 1 cut(s) 1361
BstSCI CCNGG 2 cut(s) 21, 22
BstSFI CTRYAG 1 cut(s) 910
BstV2I GAAGAC 1 cut(s) 228
BstX2I RGATCY 2 cut(s) 420, 1549
BstYI RGATCY 2 cut(s) 420, 1549
BsuRI GGCC 2 cut(s) 1336, 1457
BtgI CCRYGG 1 cut(s) 1149
BtgZI GCGATG 1 cut(s) 449
BtsCI GGATG 8 cut(s) 109, 409, 496, 706, 811, 1111, 1626, 1672
BtsIMutI CAGTG 3 cut(s) 246, 340, 1118
Cac8I GCNNGC 2 cut(s) 1040, 1359
CaiI CAGNNNCTG 1 cut(s) 1436
CciI TCATGA 1 cut(s) 112
CfoI GCGC 2 cut(s) 963, 1089
Cfr13I GGNCC 2 cut(s) 409, 1157
Cfr9I CCCGGG 1 cut(s) 22
CseI GACGC 1 cut(s) 1516
Csp6I GTAC 4 cut(s) 142, 214, 738, 1655
CspCI CAANNNNNGTGG 2 cut(s) 580, 615
CviAII CATG 6 cut(s) 113, 800, 1019, 1150, 1307, 1358
CviQI GTAC 4 cut(s) 142, 214, 738, 1655
DdeI CTNAG 6 cut(s) 120, 249, 387, 825, 864, 1182
DpnI GATC 8 cut(s) 422, 876, 950, 1062, 1461, 1551, 1562, 1671
DpnII GATC 8 cut(s) 420, 874, 948, 1060, 1459, 1549, 1560, 1669
DraI TTTAAA 3 cut(s) 564, 1369, 1683
DraIII CACNNNGTG 1 cut(s) 1205
EaeI YGGCCR 1 cut(s) 1455
Eam1104I CTCTTC 3 cut(s) 372, 958, 1608
EarI CTCTTC 3 cut(s) 372, 958, 1608
Ecl136II GAGCTC 1 cut(s) 58
Eco130I CCWWGG 1 cut(s) 1149
Eco24I GRGCYC 1 cut(s) 60
Eco31I GGTCTC 1 cut(s) 1278
Eco47I GGWCC 2 cut(s) 409, 1157
Eco53kI GAGCTC 1 cut(s) 58
Eco57I CTGAAG 2 cut(s) 815, 939
Eco88I CYCGRG 1 cut(s) 22
EcoICRI GAGCTC 1 cut(s) 58
EcoO109I RGGNCCY 1 cut(s) 409
EcoRI GAATTC 1 cut(s) 442
EcoT14I CCWWGG 1 cut(s) 1149
EcoT38I GRGCYC 1 cut(s) 60
ErhI CCWWGG 1 cut(s) 1149
FaeI CATG 6 cut(s) 116, 803, 1022, 1153, 1310, 1361
FaqI GGGAC 3 cut(s) 209, 395, 1519
FatI CATG 6 cut(s) 112, 799, 1018, 1149, 1306, 1357
FauI CCCGC 1 cut(s) 1285
FbaI TGATCA 1 cut(s) 1560
FokI GGATG 8 cut(s) 116, 416, 503, 713, 818, 1118, 1633, 1659
FriOI GRGCYC 1 cut(s) 60
FspBI CTAG 6 cut(s) 87, 231, 927, 1110, 1607, 1659
GlaI GCGC 2 cut(s) 962, 1088
GsaI CCCAGC 2 cut(s) 489, 498
GsuI CTGGAG 1 cut(s) 1574
HaeIII GGCC 2 cut(s) 1336, 1457
HapII CCGG 1 cut(s) 23
HgaI GACGC 1 cut(s) 1516
HhaI GCGC 2 cut(s) 963, 1089
Hin1II CATG 6 cut(s) 116, 803, 1022, 1153, 1310, 1361
Hin6I GCGC 2 cut(s) 961, 1087
HinP1I GCGC 2 cut(s) 961, 1087
HincII GTYRAC 1 cut(s) 352
HindII GTYRAC 1 cut(s) 352
HinfI GANTC 8 cut(s) 109, 516, 761, 785, 1250, 1316, 1351, 1646
HpaII CCGG 1 cut(s) 23
HphI GGTGA 4 cut(s) 284, 386, 650, 1322
Hpy166II GTNNAC 6 cut(s) 352, 602, 756, 1118, 1160, 1655
Hpy188III TCNNGA 8 cut(s) 113, 165, 989, 1064, 1463, 1553, 1564, 1689
Hpy8I GTNNAC 6 cut(s) 352, 602, 756, 1118, 1160, 1655
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 5 cut(s) 237, 562, 1321, 1564, 1686
HpyCH4III ACNGT 2 cut(s) 356, 997
HpyCH4V TGCA 9 cut(s) 11, 338, 654, 1018, 1038, 1199, 1361, 1396, 1525
HpyF3I CTNAG 6 cut(s) 120, 249, 387, 825, 864, 1182
Hsp92II CATG 6 cut(s) 116, 803, 1022, 1153, 1310, 1361
HspAI GCGC 2 cut(s) 961, 1087
KflI GGGWCCC 1 cut(s) 409
Ksp22I TGATCA 1 cut(s) 1560
Kzo9I GATC 8 cut(s) 420, 874, 948, 1060, 1459, 1549, 1560, 1669
LguI GCTCTTC 1 cut(s) 1608
LmnI GCTCC 7 cut(s) 42, 291, 478, 532, 889, 1427, 1555
LweI GCATC 4 cut(s) 426, 481, 545, 1096
MaeI CTAG 6 cut(s) 87, 231, 927, 1110, 1607, 1659
MaeIII GTNAC 1 cut(s) 261
MalI GATC 8 cut(s) 422, 876, 950, 1062, 1461, 1551, 1562, 1671
MbiI CCGCTC 1 cut(s) 1618
MboI GATC 8 cut(s) 420, 874, 948, 1060, 1459, 1549, 1560, 1669
MfeI CAATTG 2 cut(s) 592, 723
MflI RGATCY 2 cut(s) 420, 1549
MhlI GDGCHC 2 cut(s) 60, 1582
MlyI GAGTC 1 cut(s) 1360
MmeI TCCRAC 2 cut(s) 64, 1412
MroXI GAANNNNTTC 1 cut(s) 789
MslI CAYNNNNRTG 2 cut(s) 804, 982
MspA1I CMGCKG 2 cut(s) 1181, 1433
MspI CCGG 1 cut(s) 23
MspR9I CCNGG 2 cut(s) 23, 24
MunI CAATTG 2 cut(s) 592, 723
Mva1269I GAATGC 1 cut(s) 963
NciI CCSGG 2 cut(s) 23, 24
NcoI CCATGG 1 cut(s) 1149
NdeII GATC 8 cut(s) 420, 874, 948, 1060, 1459, 1549, 1560, 1669
NlaIII CATG 6 cut(s) 116, 803, 1022, 1153, 1310, 1361
NlaIV GGNNCC 4 cut(s) 410, 411, 422, 528
NmuCI GTSAC 1 cut(s) 261
NspI RCATGY 1 cut(s) 1361
PaeI GCATGC 1 cut(s) 1361
PagI TCATGA 1 cut(s) 112
PciSI GCTCTTC 1 cut(s) 1608
PctI GAATGC 1 cut(s) 963
PdmI GAANNNNTTC 1 cut(s) 789
PfeI GAWTC 7 cut(s) 109, 516, 761, 785, 1250, 1316, 1646
PleI GAGTC 1 cut(s) 1359
PpsI GAGTC 1 cut(s) 1359
PpuMI RGGWCCY 1 cut(s) 409
PshBI ATTAAT 1 cut(s) 327
Psp124BI GAGCTC 1 cut(s) 60
Psp5II RGGWCCY 1 cut(s) 409
PspFI CCCAGC 2 cut(s) 485, 494
PspN4I GGNNCC 4 cut(s) 410, 411, 422, 528
PspPI GGNCC 2 cut(s) 409, 1157
PspPPI RGGWCCY 1 cut(s) 409
PstNI CAGNNNCTG 1 cut(s) 1436
PsuI RGATCY 2 cut(s) 420, 1549
PvuII CAGCTG 2 cut(s) 1181, 1433
RsaI GTAC 4 cut(s) 143, 215, 739, 1656
RsaNI GTAC 4 cut(s) 142, 214, 738, 1655
RseI CAYNNNNRTG 2 cut(s) 804, 982
SacI GAGCTC 1 cut(s) 60
SapI GCTCTTC 1 cut(s) 1608
Sau3AI GATC 8 cut(s) 420, 874, 948, 1060, 1459, 1549, 1560, 1669
Sau96I GGNCC 2 cut(s) 409, 1157
ScaI AGTACT 1 cut(s) 143
SchI GAGTC 1 cut(s) 1360
ScrFI CCNGG 2 cut(s) 23, 24
SduI GDGCHC 2 cut(s) 60, 1582
SfaNI GCATC 4 cut(s) 426, 481, 545, 1096
SfcI CTRYAG 1 cut(s) 910
SinI GGWCC 2 cut(s) 409, 1157
SmaI CCCGGG 1 cut(s) 24
SmiMI CAYNNNNRTG 2 cut(s) 804, 982
SmlI CTYRAG 1 cut(s) 1535
SmoI CTYRAG 1 cut(s) 1535
SphI GCATGC 1 cut(s) 1361
SsiI CCGC 3 cut(s) 1176, 1278, 1618
SspMI CTAG 6 cut(s) 87, 231, 927, 1110, 1607, 1659
SstI GAGCTC 1 cut(s) 60
StyD4I CCNGG 2 cut(s) 21, 22
StyI CCWWGG 1 cut(s) 1149
TaaI ACNGT 2 cut(s) 356, 997
TaqI TCGA 4 cut(s) 60, 147, 999, 1587
TatI WGTACW 2 cut(s) 141, 213
TauI GCSGC 1 cut(s) 1178
TfiI GAWTC 7 cut(s) 109, 516, 761, 785, 1250, 1316, 1646
TscAI CASTG 3 cut(s) 253, 340, 1125
TseFI GTSAC 1 cut(s) 261
Tsp45I GTSAC 1 cut(s) 261
TspDTI ATGAA 7 cut(s) 101, 129, 966, 1295, 1340, 1529, 1637
TspGWI ACGGA 3 cut(s) 413, 519, 759
TspMI CCCGGG 1 cut(s) 22
TspRI CASTG 3 cut(s) 253, 340, 1125
VpaK11BI GGWCC 2 cut(s) 409, 1157
VspI ATTAAT 1 cut(s) 327
XapI RAATTY 3 cut(s) 340, 442, 848
XceI RCATGY 1 cut(s) 1361
XcmI CCANNNNNNNNNTGG 1 cut(s) 1147
XmaI CCCGGG 1 cut(s) 22
XmnI GAANNNNTTC 1 cut(s) 789
XspI CTAG 6 cut(s) 87, 231, 927, 1110, 1607, 1659
ZrmI AGTACT 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.