Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0009551

Physical Location & Seq

Genomic Coordinates Reverse (-)

60641266 .. 60644105

Gene Structure 2840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004603

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGAACTTGCACCGCTCGACCCGGGTTCAAAGCAGCTCCGACCCGACGAACCAGAGCTCGACCTCTACACCATCCCAAGCCACTCTAGCTGGTTTTTGTGGGATGAGATTCATGAAACTGAGAGAATTGCTTTGAAGGAGTTCTTTGATGGGAGGTCGATATCAAGAACACCAAAGGTGTACAAAGAATACAGGGACTTTATTATTAACAAGTATAGAGAAGACCCAGCTAGAAAACTCACATTCACCGAGATTCGAAAGTCACTTGTGGGTGATGTTACTTTGCTGCACAAGGTCTTTAGTTTCTTGGAAAAATGGGGGTTGATTAATTTTGGGGCAAGTTCGCGTGGCAATGACGGTTTTGGTACCTGGGTTGAGGACAGGACTACGGTTAAGGTTGAGGAAGGAGTCCCAAATGCGGTCCGAGTGGGTGCAAATCCAAGTGATTCTAAGCCCCTTTCGGCCACACCTACGGTAGCGGACAGTGGGGGTGGAAGTGCGAGTAGAATTACATTGCCTCCATTGGCATCGTACTCGAATGTTTTTGGTGATTTGAAGAAAGAGAGGTTGGTTTGTAGCAATTGTGGCGGACATTGTGATTGTGGACACTACAAGTATAACAAGGGTGATTTTCTACTTTGCACAAAGTGTTTTGAAAATGGAAACTATGGGGAGAACAAATTGAAGGAAGATTTCAAGTACAACGAGCCAGTTGAAAAGAGTAGTAATATTGGACTTGAGTGGACTGAATCAGAAACTTTACTTCTTTTAGATTCAGTTGCAAAGCATGGAGATGATTGGGATCGCGTTGCTCAAAATGTTAAGACCAAGACCAAAGTTGATTGTATTGCTAAGCTTATTGACTTGCCTTTTGGGGAGGTTGTGTTTGGTTCTGGTCACAGAATAGGTAACCATAGTGGCTTTAGTGGCAACTTGAGCGGTTCAAAACAAGGGCAGTTATCTTCATCCGAGTGTCAAGAGACTATCAAAACCAAGAGTCAGAGCCATGAGCAGACAAATGACAGTGAGCAGAATGGAGATACTGCAAACCAAGGTCCCCCTTTGAAAAAACAACGCGTCGCTTCCCTTTCGGATGCAAGTAGTTCACTGATTACACAGGTATCTGCCTTGTCAACCTTGGTTGGTCCGCATATTACAGCTTCTGCAGCTGAGGCTGCTGTTAATGCACTTTGTGAGGAAACCTCATGTTCAAAGGAGATATTTAATGGTGAAGACGATTGTGTTACTAATGGCTTGCAGTCTCCCGCTATAAATTGTGAGACAGAGAGAGTCCTTCAACTTGAAGATTCAGAGATGAAGGAAAGGCAAACTGAATCAGCGGGTCAGGATGCGTTTATAAAAAAAGATGACATACCTCCAACTTTGCAAATTAGAGCTGCCATCGCAACAGGTCTTGGAGCAGCTGCTGCTCGTGCCAAATTACTGGCTGATCAGGAGGATAGAGAGATTGAACATCTTTTGGCAACCATAATAGGGACACAGATGAAGAAGTTGCACTGCAAAATCAAGACCGTCGAAGAACTGGAGCTGCTTATGGAGAAGGAATATGCAGAAATGGAAGAAGAAGAAGATTCTCTGCTAGAAGAACGAATTGACATCATACAGAAGACACTCGACTCCGGGGTACCTAGATGGAGGGATCATCCTCCAGTAAAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SURF2 SWIRM SWIRM-assoc_1

Protein Analysis

561

Amino Acids

61.88

Weight (kDa)

5.08

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	34 - 111	2.5e-25	SWIRM domain
Myb_DNA-binding	PF00249	247 - 285	3.4e-09	Myb-like DNA-binding domain
SWIRM-assoc_1	PF16495	470 - 545	3e-18	SWIRM-associated region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47620 AT2G47620
fragaria_vesca	FvH4_5g08750 FvH4_5g08750
malus_domestica	MD06G1137800.v1.1 MD14G1152600.v1.1
prunus_persica	Prupe.5G147600_v2.0.a1 Prupe.5G147600_v2.0.a1
pyrus_communis	pycom06g12900 pycom14g12700
rosa_chinensis	RchiOBHm_Chr7g0189531
rosa_laevigata	RLG00000004603
rosa_multiflora	Rmu_co8438941.1_g000001 Rmu_sc0001924.1_g000010 Rmu_sc0009639.1_g000010 Rmu_sc0042771.1_g000001
rosa_rugosa	Rorug06G0498800
rosa_samantha	Rh7AG103700 Rh7BG106400 Rh7CG108500 Rh7DG105800
rosa_wichuraiana	Rw7G008950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1358
Acc65I	GGTACC	2 cut(s)	365, 1645
AccB1I	GGYRCC	2 cut(s)	365, 1645
AccBSI	CCGCTC	2 cut(s)	16, 939
AccII	CGCG	3 cut(s)	346, 807, 1077
AciI	CCGC	8 cut(s)	14, 419, 479, 588, 939, 1148, 1266, 1340
AclWI	GGATC	2 cut(s)	810, 1668
AcoI	YGGCCR	1 cut(s)	462
AdeI	CACNNNGTG	2 cut(s)	648, 1193
AfaI	GTAC	5 cut(s)	182, 367, 533, 701, 1647
AfiI	CCNNNNNNNGG	2 cut(s)	418, 1494
AflIII	ACRYGT	1 cut(s)	1075
AjnI	CCWGG	1 cut(s)	368
AjuI	GAANNNNNNNTTGG	2 cut(s)	551, 583
Alw21I	GWGCWC	1 cut(s)	60
Alw26I	GTCTC	3 cut(s)	974, 1266, 1274
AlwI	GGATC	2 cut(s)	810, 1668
AlwNI	CAGNNNCTG	2 cut(s)	1163, 1427
Ama87I	CYCGRG	1 cut(s)	22
AoxI	GGCC	1 cut(s)	462
ApeKI	GCWGC	9 cut(s)	34, 286, 1166, 1175, 1397, 1421, 1424, 1427, 1549
ArsI	GACNNNNNNTTYG	2 cut(s)	854, 886
AseI	ATTAAT	1 cut(s)	327
Asp700I	GAANNNNTTC	1 cut(s)	140
Asp718I	GGTACC	2 cut(s)	365, 1645
AspS9I	GGNCC	3 cut(s)	421, 1055, 1145
AsuC2I	CCSGG	3 cut(s)	23, 24, 1642
AsuHPI	GGTGA	5 cut(s)	238, 284, 560, 638, 1241
AsuII	TTCGAA	1 cut(s)	256
AvaI	CYCGRG	1 cut(s)	22
AvaII	GGWCC	3 cut(s)	421, 1055, 1145
BaeI	ACNNNNGTAYC	4 cut(s)	357, 390, 1104, 1137
BanI	GGYRCC	2 cut(s)	365, 1645
BanII	GRGCYC	1 cut(s)	60
BauI	CACGAG	1 cut(s)	1431
BbsI	GAAGAC	3 cut(s)	228, 1239, 1634
Bbv12I	GWGCWC	1 cut(s)	60
BbvCI	CCTCAGC	1 cut(s)	1170
BbvI	GCAGC	9 cut(s)	46, 273, 1162, 1178, 1384, 1411, 1414, 1433, 1536
BccI	CCATC	4 cut(s)	80, 143, 1409, 1647
BcgI	CGANNNNNNTGC	2 cut(s)	516, 550
BciT130I	CCWGG	1 cut(s)	370
BclI	TGATCA	1 cut(s)	1450
BcnI	CCSGG	3 cut(s)	23, 24, 1642
BcoDI	GTCTC	3 cut(s)	974, 1266, 1274
BfaI	CTAG	4 cut(s)	87, 231, 1601, 1650
BfmI	CTRYAG	1 cut(s)	1164
BisI	GCNGC	9 cut(s)	35, 287, 1167, 1176, 1398, 1422, 1425, 1428, 1550
BlpI	GCTNAGC	1 cut(s)	852
BlsI	GCNGC	9 cut(s)	36, 288, 1168, 1177, 1399, 1423, 1426, 1429, 1551
Bme1390I	CCNGG	4 cut(s)	23, 24, 370, 1642
Bme18I	GGWCC	3 cut(s)	421, 1055, 1145
BmeT110I	CYCGRG	1 cut(s)	22
BmgT120I	GGNCC	3 cut(s)	421, 1055, 1145
BmiI	GGNNCC	3 cut(s)	367, 1057, 1647
BmrFI	CCNGG	4 cut(s)	23, 24, 370, 1642
BmsI	GCATC	3 cut(s)	536, 1084, 1339
BpiI	GAAGAC	3 cut(s)	228, 1239, 1634
BplI	GAGNNNNNCTC	2 cut(s)	1187, 1219
BpmI	CTGGAG	2 cut(s)	1565, 1653
Bpu10I	CCTNAGC	1 cut(s)	1170
Bpu1102I	GCTNAGC	1 cut(s)	852
Bpu14I	TTCGAA	1 cut(s)	256
BpuEI	CTTGAG	2 cut(s)	758, 955
BpuMI	CCSGG	3 cut(s)	23, 24, 1642
BsaBI	GATNNNNATC	1 cut(s)	801
BsaJI	CCNNGG	5 cut(s)	22, 369, 1051, 1137, 1641
BsaXI	ACNNNNNCTCC	4 cut(s)	502, 532, 869, 899
Bsc4I	CCNNNNNNNGG	2 cut(s)	418, 1494
Bse1I	ACTGG	4 cut(s)	710, 1449, 1548, 1670
Bse3DI	GCAATG	2 cut(s)	358, 512
Bse8I	GATNNNNATC	1 cut(s)	801
BseBI	CCWGG	1 cut(s)	370
BseDI	CCNNGG	5 cut(s)	22, 369, 1051, 1137, 1641
BseGI	GGATG	6 cut(s)	72, 109, 965, 1099, 1354, 1663
BseJI	GATNNNNATC	1 cut(s)	801
BseLI	CCNNNNNNNGG	2 cut(s)	418, 1494
BseMI	GCAATG	2 cut(s)	358, 512
BseMII	CTCAG	2 cut(s)	111, 1161
BseNI	ACTGG	4 cut(s)	710, 1449, 1548, 1670
BseXI	GCAGC	9 cut(s)	46, 273, 1162, 1178, 1384, 1411, 1414, 1433, 1536
BseYI	CCCAGC	1 cut(s)	226
BsgI	GTGCAG	1 cut(s)	272
Bsh1236I	CGCG	3 cut(s)	346, 807, 1077
BshFI	GGCC	1 cut(s)	464
BshNI	GGYRCC	2 cut(s)	365, 1645
BsiHKAI	GWGCWC	1 cut(s)	60
BsiHKCI	CYCGRG	1 cut(s)	22
BsiSI	CCGG	2 cut(s)	23, 1641
BslFI	GGGAC	4 cut(s)	209, 395, 1041, 1510
BslI	CCNNNNNNNGG	2 cut(s)	418, 1494
BsmAI	GTCTC	3 cut(s)	974, 1266, 1274
BsmFI	GGGAC	4 cut(s)	209, 395, 1041, 1510
BsnI	GGCC	1 cut(s)	464
BsoBI	CYCGRG	1 cut(s)	22
Bsp119I	TTCGAA	1 cut(s)	256
Bsp1286I	GDGCHC	1 cut(s)	60
Bsp1407I	TGTACA	1 cut(s)	180
Bsp143I	GATC	3 cut(s)	802, 1450, 1660
Bsp1720I	GCTNAGC	1 cut(s)	852
BspACI	CCGC	8 cut(s)	14, 419, 479, 588, 939, 1148, 1266, 1340
BspANI	GGCC	1 cut(s)	464
BspCNI	CTCAG	2 cut(s)	112, 1162
BspFNI	CGCG	3 cut(s)	346, 807, 1077
BspHI	TCATGA	1 cut(s)	112
BspLI	GGNNCC	3 cut(s)	367, 1057, 1647
BspMAI	CTGCAG	1 cut(s)	1168
BspPI	GGATC	2 cut(s)	810, 1668
BspT104I	TTCGAA	1 cut(s)	256
BspT107I	GGYRCC	2 cut(s)	365, 1645
BsrBI	CCGCTC	2 cut(s)	16, 939
BsrDI	GCAATG	2 cut(s)	358, 512
BsrGI	TGTACA	1 cut(s)	180
BsrI	ACTGG	4 cut(s)	710, 1449, 1548, 1670
BssECI	CCNNGG	5 cut(s)	22, 369, 1051, 1137, 1641
BssMI	GATC	3 cut(s)	802, 1450, 1660
BssSI	CACGAG	1 cut(s)	1431
BssT1I	CCWWGG	2 cut(s)	1051, 1137
Bst2BI	CACGAG	1 cut(s)	1431
Bst2UI	CCWGG	1 cut(s)	370
Bst4CI	ACNGT	6 cut(s)	359, 391, 475, 485, 1025, 1534
BstAPI	GCANNNNNTGC	1 cut(s)	1427
BstAUI	TGTACA	1 cut(s)	180
BstBI	TTCGAA	1 cut(s)	256
BstC8I	GCNNGC	1 cut(s)	1256
BstDEI	CTNAG	4 cut(s)	120, 450, 852, 1170
BstEII	GGTNACC	1 cut(s)	908
BstF5I	GGATG	6 cut(s)	72, 109, 965, 1099, 1354, 1663
BstFNI	CGCG	3 cut(s)	346, 807, 1077
BstKTI	GATC	3 cut(s)	805, 1453, 1663
BstMAI	GTCTC	3 cut(s)	974, 1266, 1274
BstMBI	GATC	3 cut(s)	802, 1450, 1660
BstNI	CCWGG	1 cut(s)	370
BstPI	GGTNACC	1 cut(s)	908
BstSCI	CCNGG	4 cut(s)	21, 22, 368, 1640
BstSFI	CTRYAG	1 cut(s)	1164
BstUI	CGCG	3 cut(s)	346, 807, 1077
BstV1I	GCAGC	9 cut(s)	46, 273, 1162, 1178, 1384, 1411, 1414, 1433, 1536
BstV2I	GAAGAC	3 cut(s)	228, 1239, 1634
BstXI	CCANNNNNNTGG	1 cut(s)	1444
BsuRI	GGCC	1 cut(s)	464
BtgZI	GCGATG	1 cut(s)	1387
BtsCI	GGATG	6 cut(s)	72, 109, 965, 1099, 1354, 1663
BtsI	GCAGTG	1 cut(s)	1516
BtsIMutI	CAGTG	4 cut(s)	490, 1030, 1106, 1516
Cac8I	GCNNGC	1 cut(s)	1256
CaiI	CAGNNNCTG	2 cut(s)	1163, 1427
CciI	TCATGA	1 cut(s)	112
Cfr13I	GGNCC	3 cut(s)	421, 1055, 1145
Cfr9I	CCCGGG	1 cut(s)	22
CpoI	CGGWCCG	1 cut(s)	421
CseI	GACGC	1 cut(s)	1066
Csp6I	GTAC	5 cut(s)	181, 366, 532, 700, 1646
CspI	CGGWCCG	1 cut(s)	421
CviAII	CATG	4 cut(s)	113, 788, 1007, 1206
CviQI	GTAC	5 cut(s)	181, 366, 532, 700, 1646
DdeI	CTNAG	4 cut(s)	120, 450, 852, 1170
DpnI	GATC	3 cut(s)	804, 1452, 1662
DpnII	GATC	3 cut(s)	802, 1450, 1660
DraIII	CACNNNGTG	2 cut(s)	648, 1193
EaeI	YGGCCR	1 cut(s)	462
EciI	GGCGGA	1 cut(s)	603
Ecl136II	GAGCTC	1 cut(s)	58
Eco130I	CCWWGG	2 cut(s)	1051, 1137
Eco24I	GRGCYC	1 cut(s)	60
Eco32I	GATATC	1 cut(s)	162
Eco47I	GGWCC	3 cut(s)	421, 1055, 1145
Eco53kI	GAGCTC	1 cut(s)	58
Eco88I	CYCGRG	1 cut(s)	22
Eco91I	GGTNACC	1 cut(s)	908
EcoICRI	GAGCTC	1 cut(s)	58
EcoO109I	RGGNCCY	1 cut(s)	1055
EcoO65I	GGTNACC	1 cut(s)	908
EcoRII	CCWGG	1 cut(s)	368
EcoRV	GATATC	1 cut(s)	162
EcoT14I	CCWWGG	2 cut(s)	1051, 1137
EcoT38I	GRGCYC	1 cut(s)	60
ErhI	CCWWGG	2 cut(s)	1051, 1137
FaeI	CATG	4 cut(s)	116, 791, 1010, 1209
FalI	AAGNNNNNCTT	2 cut(s)	128, 160
FaqI	GGGAC	4 cut(s)	209, 395, 1041, 1510
FatI	CATG	4 cut(s)	112, 787, 1006, 1205
FauI	CCCGC	2 cut(s)	1273, 1333
FbaI	TGATCA	1 cut(s)	1450
Fnu4HI	GCNGC	9 cut(s)	35, 287, 1167, 1176, 1398, 1422, 1425, 1428, 1550
FokI	GGATG	6 cut(s)	59, 116, 952, 1106, 1361, 1650
FriOI	GRGCYC	1 cut(s)	60
Fsp4HI	GCNGC	9 cut(s)	35, 287, 1167, 1176, 1398, 1422, 1425, 1428, 1550
FspBI	CTAG	4 cut(s)	87, 231, 1601, 1650
GluI	GCNGC	9 cut(s)	35, 287, 1167, 1176, 1398, 1422, 1425, 1428, 1550
GsaI	CCCAGC	1 cut(s)	230
GsuI	CTGGAG	2 cut(s)	1565, 1653
HaeIII	GGCC	1 cut(s)	464
HapII	CCGG	2 cut(s)	23, 1641
HgaI	GACGC	1 cut(s)	1066
Hin1II	CATG	4 cut(s)	116, 791, 1010, 1209
HincII	GTYRAC	1 cut(s)	1134
HindII	GTYRAC	1 cut(s)	1134
HindIII	AAGCTT	1 cut(s)	854
HpaII	CCGG	2 cut(s)	23, 1641
HphI	GGTGA	5 cut(s)	238, 284, 560, 638, 1241
Hpy166II	GTNNAC	5 cut(s)	181, 605, 744, 1106, 1134
Hpy188I	TCNGA	7 cut(s)	41, 425, 754, 970, 1002, 1093, 1312
Hpy188III	TCNNGA	7 cut(s)	113, 165, 977, 1346, 1454, 1528, 1680
Hpy8I	GTNNAC	5 cut(s)	181, 605, 744, 1106, 1134
Hpy99I	CGWCG	3 cut(s)	50, 1082, 1538
HpyAV	CCTTC	6 cut(s)	130, 398, 679, 1304, 1312, 1555
HpyCH4III	ACNGT	6 cut(s)	359, 391, 475, 485, 1025, 1534
HpyF3I	CTNAG	4 cut(s)	120, 450, 852, 1170
Hsp92II	CATG	4 cut(s)	116, 791, 1010, 1209
KpnI	GGTACC	2 cut(s)	369, 1649
Ksp22I	TGATCA	1 cut(s)	1450
Kzo9I	GATC	3 cut(s)	802, 1450, 1660
LmnI	GCTCC	3 cut(s)	42, 1418, 1546
Lsp1109I	GCAGC	9 cut(s)	46, 273, 1162, 1178, 1384, 1411, 1414, 1433, 1536
LweI	GCATC	3 cut(s)	536, 1084, 1339
MaeI	CTAG	4 cut(s)	87, 231, 1601, 1650
MaeIII	GTNAC	5 cut(s)	261, 277, 896, 908, 1243
MalI	GATC	3 cut(s)	804, 1452, 1662
MbiI	CCGCTC	2 cut(s)	16, 939
MboI	GATC	3 cut(s)	802, 1450, 1660
MfeI	CAATTG	1 cut(s)	580
MhlI	GDGCHC	1 cut(s)	60
MluCI	AATT	9 cut(s)	126, 328, 507, 580, 680, 1273, 1389, 1439, 1611
MluI	ACGCGT	1 cut(s)	1075
MlyI	GAGTC	4 cut(s)	417, 1006, 1299, 1631
MmeI	TCCRAC	2 cut(s)	64, 1403
MroXI	GAANNNNTTC	1 cut(s)	140
MseI	TTAA	6 cut(s)	207, 327, 393, 822, 1182, 1224
MslI	CAYNNNNRTG	2 cut(s)	792, 970
MspA1I	CMGCKG	3 cut(s)	1169, 1340, 1424
MspI	CCGG	2 cut(s)	23, 1641
MspR9I	CCNGG	4 cut(s)	23, 24, 370, 1642
MunI	CAATTG	1 cut(s)	580
MvaI	CCWGG	1 cut(s)	370
MvnI	CGCG	3 cut(s)	346, 807, 1077
NciI	CCSGG	3 cut(s)	23, 24, 1642
NdeII	GATC	3 cut(s)	802, 1450, 1660
NlaIII	CATG	4 cut(s)	116, 791, 1010, 1209
NlaIV	GGNNCC	3 cut(s)	367, 1057, 1647
NmuCI	GTSAC	2 cut(s)	261, 896
NspV	TTCGAA	1 cut(s)	256
PagI	TCATGA	1 cut(s)	112
PdmI	GAANNNNTTC	1 cut(s)	140
PfeI	GAWTC	8 cut(s)	109, 253, 446, 749, 773, 1307, 1334, 1592
PkrI	GCNGC	9 cut(s)	36, 288, 1168, 1177, 1399, 1423, 1426, 1429, 1551
PleI	GAGTC	4 cut(s)	416, 1005, 1298, 1631
PpsI	GAGTC	4 cut(s)	416, 1005, 1298, 1631
PpuMI	RGGWCCY	1 cut(s)	1055
PshBI	ATTAAT	1 cut(s)	327
PsiI	TTATAA	1 cut(s)	1358
Psp124BI	GAGCTC	1 cut(s)	60
Psp5II	RGGWCCY	1 cut(s)	1055
Psp6I	CCWGG	1 cut(s)	368
PspEI	GGTNACC	1 cut(s)	908
PspFI	CCCAGC	1 cut(s)	226
PspGI	CCWGG	1 cut(s)	368
PspN4I	GGNNCC	3 cut(s)	367, 1057, 1647
PspPI	GGNCC	3 cut(s)	421, 1055, 1145
PspPPI	RGGWCCY	1 cut(s)	1055
PstI	CTGCAG	1 cut(s)	1168
PstNI	CAGNNNCTG	2 cut(s)	1163, 1427
PvuII	CAGCTG	2 cut(s)	1169, 1424
RsaI	GTAC	5 cut(s)	182, 367, 533, 701, 1647
RsaNI	GTAC	5 cut(s)	181, 366, 532, 700, 1646
RseI	CAYNNNNRTG	2 cut(s)	792, 970
Rsr2I	CGGWCCG	1 cut(s)	421
RsrII	CGGWCCG	1 cut(s)	421
SacI	GAGCTC	1 cut(s)	60
SaqAI	TTAA	6 cut(s)	207, 327, 393, 822, 1182, 1224
SatI	GCNGC	9 cut(s)	35, 287, 1167, 1176, 1398, 1422, 1425, 1428, 1550
Sau3AI	GATC	3 cut(s)	802, 1450, 1660
Sau96I	GGNCC	3 cut(s)	421, 1055, 1145
SchI	GAGTC	4 cut(s)	417, 1006, 1299, 1631
ScrFI	CCNGG	4 cut(s)	23, 24, 370, 1642
SduI	GDGCHC	1 cut(s)	60
SfaNI	GCATC	3 cut(s)	536, 1084, 1339
SfcI	CTRYAG	1 cut(s)	1164
SfuI	TTCGAA	1 cut(s)	256
SinI	GGWCC	3 cut(s)	421, 1055, 1145
SmaI	CCCGGG	1 cut(s)	24
SmiMI	CAYNNNNRTG	2 cut(s)	792, 970
SmlI	CTYRAG	2 cut(s)	737, 934
SmoI	CTYRAG	2 cut(s)	737, 934
Sse9I	AATT	9 cut(s)	126, 328, 507, 580, 680, 1273, 1389, 1439, 1611
SsiI	CCGC	8 cut(s)	14, 419, 479, 588, 939, 1148, 1266, 1340
SspI	AATATT	1 cut(s)	730
SspMI	CTAG	4 cut(s)	87, 231, 1601, 1650
SstI	GAGCTC	1 cut(s)	60
StyD4I	CCNGG	4 cut(s)	21, 22, 368, 1640
StyI	CCWWGG	2 cut(s)	1051, 1137
TaaI	ACNGT	6 cut(s)	359, 391, 475, 485, 1025, 1534
TaqI	TCGA	7 cut(s)	18, 60, 158, 256, 536, 1536, 1635
TasI	AATT	9 cut(s)	126, 328, 507, 580, 680, 1273, 1389, 1439, 1611
TatI	WGTACW	2 cut(s)	180, 699
TfiI	GAWTC	8 cut(s)	109, 253, 446, 749, 773, 1307, 1334, 1592
Tru1I	TTAA	6 cut(s)	207, 327, 393, 822, 1182, 1224
Tru9I	TTAA	6 cut(s)	207, 327, 393, 822, 1182, 1224
TscAI	CASTG	4 cut(s)	490, 1030, 1113, 1523
TseFI	GTSAC	2 cut(s)	261, 896
TseI	GCWGC	9 cut(s)	34, 286, 1166, 1175, 1397, 1421, 1424, 1427, 1549
Tsp45I	GTSAC	2 cut(s)	261, 896
TspDTI	ATGAA	5 cut(s)	101, 129, 954, 1331, 1520
TspMI	CCCGGG	1 cut(s)	22
TspRI	CASTG	4 cut(s)	490, 1030, 1113, 1523
VpaK11BI	GGWCC	3 cut(s)	421, 1055, 1145
VspI	ATTAAT	1 cut(s)	327
XmaI	CCCGGG	1 cut(s)	22
XmnI	GAANNNNTTC	1 cut(s)	140
XspI	CTAG	4 cut(s)	87, 231, 1601, 1650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.