MD06G1168200.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
30835147 .. 30836327
1181 bp
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UTR
Exon/CDS
Intron
MD06G1168200.v1.1.491

Sequence Viewer

Length: 201 bp
ATGAATGATAGTGCAAAGGGTATGGTAATTGATGTCCGCCTCAGCACCCTTTGCGGTCATATTGTTGCCAATTCCATCAGCAATTTTACTCTCTTCATTGTATCCTTTTTGGTGATTACAGCTTTTCTATTGACATTCGGCTTTAAATCTTTGTTACATTGTTCGAAAAAAATTTGGCTAGTGATTTTCACGCTCGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.35

Weight (kDa)

8.8

Isoelectric Point (pI)

13.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 37, 54
AcsI RAATTY 1 cut(s) 171
AluBI AGCT 1 cut(s) 122
AluI AGCT 1 cut(s) 122
ApoI RAATTY 1 cut(s) 171
AsuHPI GGTGA 1 cut(s) 124
AsuII TTCGAA 1 cut(s) 164
BbvCI CCTCAGC 1 cut(s) 41
BccI CCATC 1 cut(s) 83
BciVI GTATCC 1 cut(s) 112
BfaI CTAG 1 cut(s) 179
BfuI GTATCC 1 cut(s) 112
Bpu10I CCTNAGC 1 cut(s) 41
Bpu14I TTCGAA 1 cut(s) 164
BseMII CTCAG 1 cut(s) 55
Bsp119I TTCGAA 1 cut(s) 164
BspACI CCGC 2 cut(s) 37, 54
BspCNI CTCAG 1 cut(s) 54
BspT104I TTCGAA 1 cut(s) 164
Bst6I CTCTTC 1 cut(s) 98
BstAPI GCANNNNNTGC 1 cut(s) 51
BstBI TTCGAA 1 cut(s) 164
BstDEI CTNAG 1 cut(s) 41
BstMWI GCNNNNNNNGC 1 cut(s) 51
BsuI GTATCC 1 cut(s) 112
CviJI RGCY 3 cut(s) 122, 141, 178
CviKI_1 RGCY 3 cut(s) 122, 141, 178
DdeI CTNAG 1 cut(s) 41
DraI TTTAAA 1 cut(s) 145
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
EciI GGCGGA 1 cut(s) 26
FaiI YATR 2 cut(s) 23, 60
FspBI CTAG 1 cut(s) 179
HphI GGTGA 1 cut(s) 124
HpyCH4V TGCA 1 cut(s) 14
HpyF10VI GCNNNNNNNGC 1 cut(s) 51
HpyF3I CTNAG 1 cut(s) 41
MaeI CTAG 1 cut(s) 179
MaeIII GTNAC 1 cut(s) 153
MboII GAAGA 1 cut(s) 85
MluCI AATT 4 cut(s) 27, 70, 82, 171
MnlI CCTC 1 cut(s) 50
MseI TTAA 1 cut(s) 144
MwoI GCNNNNNNNGC 1 cut(s) 51
NspV TTCGAA 1 cut(s) 164
SaqAI TTAA 1 cut(s) 144
SetI ASST 1 cut(s) 124
SfuI TTCGAA 1 cut(s) 164
SgeI CNNG 1 cut(s) 191
Sse9I AATT 4 cut(s) 27, 70, 82, 171
SsiI CCGC 2 cut(s) 37, 54
SspMI CTAG 1 cut(s) 179
TaqI TCGA 2 cut(s) 164, 195
TasI AATT 4 cut(s) 27, 70, 82, 171
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TspDTI ATGAA 2 cut(s) 17, 85
XapI RAATTY 1 cut(s) 171
XspI CTAG 1 cut(s) 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.