MD07G1043200.v1.1

65-kDa microtubule-associated protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
3612502 .. 3617402
4901 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1043200.v1.1.491

Sequence Viewer

Length: 1698 bp
ATGACCACGAAGCCCTCGTCCGTCTCTCCCTCCCGCACCACCTGCGCTTCTCTCCTCCGCGAATTGCAGATAATTTGGGATGAAATTGGGGAGAGTGACGATCAGAGGGACAAGATGCTTCTACAGCTTGAGCAAGAGTGTCTCGATATTTACCGGAAGAAGGTTGAAATGACCAGGAAGCACAGTGCCGAATTGCACCAGTACTTAGCGGACAGCCAAGCCCAGATCAAGGCCCTTGCTTTGGCCCTTGGAGAAGTTGACTCCTTTTCTTGCGGAAGAGGAACTCTCAAAGATCAATTGTCTGCCCTCAAACCTGTTCTGGACGAATTGACCTTGAAGAAGGAGAAAAGGGTCAAGGAGTTTTCAGCAGTTCTGTCCCAGATTGCAAGGATTTCGGCTGAAATAGCTGGGACTGGCGTGTCTGGGAATGTGGATGATCCAGGACTTGACGAGCGCGATTTGAGTGTGAAGAGGTTGCGGGAGCTTCAGTCGCATCTTGAGGAGCTTCAAAGAGAGAAGGTTTTGCGTCTAGAGAGAGTAAGTGCTAATGTAAACATCATCCATGAACTCTCGGTTGTAATGTCAATTGATTTCTGTAAGACAATCAACAAAGTTCACCCAAGCTTGACGGATCAGTCCTCTGCTCAGTCCAGGAGCATCAGTAATGATACTCTTGCCAGATTGACGACTTTGACTGATTCATTAAAGCAAGAGAAACAACAAAGACTGCAAAAGCTGCAATATCTTGGGAGCAAACTGATAGAACTGTGGAATCTGATTGAGACACCAATTGATGAACAGAAGAGATTTGACCATGTTACGAGCATAATTTCTTCCTCAGTTGATGAGGTGTCTAGGCAAGGATGCCTTTCCCTAGATGTCATTGAACAGACTGAGGTTGAAGTTGAGAGGTTGAATGTTTTGAAAGCCAGCAAGATGAAGGAGTTGGTATTCAAGAGGCAAAGTGAGCTGGAAGAAATTTACAGAGGGGTCCACATGGATGTAGATAGTGATTCAGCTAGAGAGATCCTCAGCAGTCTCATAGATTCTGGTAGTGTTGGTTTGTCTGAACTGCTTTCAAGCATGGATGATCAGATTCTAAAGGCCAAAGAGCAAGCCCTAAGCAGGAAGGATATTTTGGACAAGGTAGAGAAGTGCAAGTTTGCATCTGAGGAGGAAAAGTGGCTTGATGAGTATGAAAAGGATGAAAATCGCTACAGTGCAGGAAGAGGAGCACACAAAAATTTAAAGCGTGCTGAGAAAGCCCGGATTCTGGCTGGAAAAATACCATCTATCATCGAAAATTTGACTGCCAAAGTTAAAGCCTGGGAGATTGAGAAAGGAATCCCCTTCTTATATGACAAGGTTCCTCTGTTACATACGTTGGAGGAGTACACTGCACAACGACAGGAGAGAGAGGAGGAGAAGCGTAAATCTCGGGAGCAAAAACGGCTTCAAGAACAACATAATGCAGAACAGGAGGCAATCTTTGGTTCAAGGCCTTCTACAAAGAAGCCATTGGGACAGAACACAAGTGCTAACACCATGGTTGGCACACCAATCAATCGCCGCACACCTTTAGGCCGTCATGGAGTCTCAGCTGGAAAGGAACGCAAGGAAAGCGGAAGGGCACATAACGTAACGCCCATTAACTACGTTGCTCTTCCCAAGGATGATTCAGTATCTCGGAGAAACTGA

Protein Analysis

566

Amino Acids

64.01

Weight (kDa)

6.69

Isoelectric Point (pI)

53.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP65_ASE1 PF03999 17 - 505 6.8e-73 Microtubule associated protein (MAP65/ASE1 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012187)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 50
AasI GACNNNNNNGTC 2 cut(s) 418, 634
Acc36I ACCTGC 1 cut(s) 50
AccII CGCG 2 cut(s) 60, 456
AciI CCGC 7 cut(s) 34, 58, 209, 273, 478, 1570, 1623
AclWI GGATC 3 cut(s) 431, 639, 1021
AcsI RAATTY 3 cut(s) 978, 1243, 1303
AcuI CTGAAG 1 cut(s) 470
AfaI GTAC 2 cut(s) 203, 1394
AfiI CCNNNNNNNGG 5 cut(s) 160, 229, 241, 1125, 1273
AjnI CCWGG 4 cut(s) 173, 439, 650, 1325
AjuI GAANNNNNNNTTGG 2 cut(s) 1121, 1153
AluBI AGCT 9 cut(s) 127, 407, 484, 505, 624, 736, 970, 1019, 1601
AluI AGCT 9 cut(s) 127, 407, 484, 505, 624, 736, 970, 1019, 1601
Alw21I GWGCWC 1 cut(s) 1237
Alw26I GTCTC 5 cut(s) 28, 146, 776, 1043, 1600
AlwI GGATC 3 cut(s) 431, 639, 1021
Ama87I CYCGRG 1 cut(s) 1437
AoxI GGCC 5 cut(s) 231, 243, 1104, 1499, 1582
ApeKI GCWGC 1 cut(s) 736
ApoI RAATTY 3 cut(s) 978, 1243, 1303
ArsI GACNNNNNNTTYG 1 cut(s) 34
AspLEI GCGC 2 cut(s) 47, 456
AspS9I GGNCC 3 cut(s) 232, 244, 991
AsuC2I CCSGG 1 cut(s) 1267
AsuHPI GGTGA 1 cut(s) 608
AvaI CYCGRG 1 cut(s) 1437
AvaII GGWCC 1 cut(s) 991
BaeGI GKGCMC 1 cut(s) 1633
Bbv12I GWGCWC 1 cut(s) 1237
BbvCI CCTCAGC 1 cut(s) 1031
BbvI GCAGC 1 cut(s) 723
BccI CCATC 1 cut(s) 1297
BceAI ACGGC 2 cut(s) 1466, 1569
BcgI CGANNNNNNTGC 2 cut(s) 375, 409
BciT130I CCWGG 4 cut(s) 175, 441, 652, 1327
BclI TGATCA 1 cut(s) 1090
BcnI CCSGG 1 cut(s) 1267
BcoDI GTCTC 5 cut(s) 28, 146, 776, 1043, 1600
BfaI CTAG 4 cut(s) 530, 855, 875, 1020
BfmI CTRYAG 2 cut(s) 122, 1216
BfuAI ACCTGC 1 cut(s) 50
BisI GCNGC 2 cut(s) 737, 1570
BlsI GCNGC 2 cut(s) 738, 1571
BmcAI AGTACT 1 cut(s) 203
Bme1390I CCNGG 5 cut(s) 175, 441, 652, 1267, 1327
Bme18I GGWCC 1 cut(s) 991
BmeT110I CYCGRG 1 cut(s) 1437
BmgT120I GGNCC 3 cut(s) 232, 244, 991
BmiI GGNNCC 2 cut(s) 992, 1368
BmrFI CCNGG 5 cut(s) 175, 441, 652, 1267, 1327
BmsI GCATC 5 cut(s) 105, 502, 666, 854, 1175
BplI GAGNNNNNCTC 4 cut(s) 270, 302, 1014, 1046
Bpu10I CCTNAGC 2 cut(s) 1031, 1121
BpuEI CTTGAG 2 cut(s) 149, 518
BpuMI CCSGG 1 cut(s) 1267
BsaBI GATNNNNATC 1 cut(s) 1209
BsaJI CCNNGG 4 cut(s) 247, 1326, 1545, 1668
BsaWI WCCGGW 1 cut(s) 153
BsaXI ACNNNNNCTCC 6 cut(s) 473, 503, 646, 676, 1166, 1196
Bsc4I CCNNNNNNNGG 5 cut(s) 160, 229, 241, 1125, 1273
Bse1I ACTGG 2 cut(s) 199, 418
Bse8I GATNNNNATC 1 cut(s) 1209
BseBI CCWGG 4 cut(s) 175, 441, 652, 1327
BseDI CCNNGG 4 cut(s) 247, 1326, 1545, 1668
BseGI GGATG 8 cut(s) 85, 439, 558, 869, 1006, 1093, 1210, 1678
BseJI GATNNNNATC 1 cut(s) 1209
BseLI CCNNNNNNNGG 5 cut(s) 160, 229, 241, 1125, 1273
BseMII CTCAG 7 cut(s) 659, 852, 885, 1045, 1161, 1248, 1611
BseNI ACTGG 2 cut(s) 199, 418
BseRI GAGGAG 7 cut(s) 44, 515, 1187, 1245, 1403, 1433, 1436
BseSI GKGCMC 1 cut(s) 1633
BseXI GCAGC 1 cut(s) 723
BseYI CCCAGC 1 cut(s) 407
BsgI GTGCAG 2 cut(s) 1242, 1383
Bsh1236I CGCG 2 cut(s) 60, 456
BshFI GGCC 5 cut(s) 233, 245, 1106, 1501, 1584
BsiHKAI GWGCWC 1 cut(s) 1237
BsiHKCI CYCGRG 1 cut(s) 1437
BsiSI CCGG 2 cut(s) 154, 1267
BslFI GGGAC 4 cut(s) 122, 361, 424, 1536
BslI CCNNNNNNNGG 5 cut(s) 160, 229, 241, 1125, 1273
BsmAI GTCTC 5 cut(s) 28, 146, 776, 1043, 1600
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 4 cut(s) 122, 361, 424, 1536
BsnI GGCC 5 cut(s) 233, 245, 1106, 1501, 1584
BsoBI CYCGRG 1 cut(s) 1437
Bsp1286I GDGCHC 2 cut(s) 1237, 1633
Bsp143I GATC 7 cut(s) 100, 225, 292, 436, 631, 1026, 1090
Bsp19I CCATGG 1 cut(s) 1545
BspACI CCGC 7 cut(s) 34, 58, 209, 273, 478, 1570, 1623
BspANI GGCC 5 cut(s) 233, 245, 1106, 1501, 1584
BspCNI CTCAG 7 cut(s) 658, 851, 886, 1044, 1162, 1249, 1610
BspFNI CGCG 2 cut(s) 60, 456
BspLI GGNNCC 2 cut(s) 992, 1368
BspMI ACCTGC 1 cut(s) 50
BspPI GGATC 3 cut(s) 431, 639, 1021
BspQI GCTCTTC 1 cut(s) 1668
BsrI ACTGG 2 cut(s) 199, 418
BssECI CCNNGG 4 cut(s) 247, 1326, 1545, 1668
BssMI GATC 7 cut(s) 100, 225, 292, 436, 631, 1026, 1090
BssT1I CCWWGG 3 cut(s) 247, 1545, 1668
Bst2UI CCWGG 4 cut(s) 175, 441, 652, 1327
Bst4CI ACNGT 3 cut(s) 185, 768, 1220
Bst6I CTCTTC 5 cut(s) 271, 464, 797, 1222, 1668
BstAPI GCANNNNNTGC 2 cut(s) 42, 736
BstC8I GCNNGC 3 cut(s) 931, 1116, 1254
BstDEI CTNAG 9 cut(s) 205, 645, 838, 894, 1031, 1121, 1170, 1257, 1597
BstDSI CCRYGG 1 cut(s) 1545
BstF5I GGATG 8 cut(s) 85, 439, 558, 869, 1006, 1093, 1210, 1678
BstFNI CGCG 2 cut(s) 60, 456
BstHHI GCGC 2 cut(s) 47, 456
BstKTI GATC 7 cut(s) 103, 228, 295, 439, 634, 1029, 1093
BstMAI GTCTC 5 cut(s) 28, 146, 776, 1043, 1600
BstMBI GATC 7 cut(s) 100, 225, 292, 436, 631, 1026, 1090
BstMWI GCNNNNNNNGC 9 cut(s) 42, 124, 404, 490, 736, 967, 1262, 1450, 1620
BstNI CCWGG 4 cut(s) 175, 441, 652, 1327
BstSCI CCNGG 5 cut(s) 173, 439, 650, 1265, 1325
BstSFI CTRYAG 2 cut(s) 122, 1216
BstSLI GKGCMC 1 cut(s) 1633
BstUI CGCG 2 cut(s) 60, 456
BstV1I GCAGC 1 cut(s) 723
BstX2I RGATCY 1 cut(s) 1026
BstYI RGATCY 1 cut(s) 1026
BsuRI GGCC 5 cut(s) 233, 245, 1106, 1501, 1584
BtgI CCRYGG 1 cut(s) 1545
BtsCI GGATG 8 cut(s) 85, 439, 558, 869, 1006, 1093, 1210, 1678
BtsI GCAGTG 1 cut(s) 1395
BtsIMutI CAGTG 3 cut(s) 190, 1225, 1395
BveI ACCTGC 1 cut(s) 50
Cac8I GCNNGC 3 cut(s) 931, 1116, 1254
CfoI GCGC 2 cut(s) 47, 456
Cfr13I GGNCC 3 cut(s) 232, 244, 991
CseI GACGC 1 cut(s) 515
Csp6I GTAC 2 cut(s) 202, 1393
CviAII CATG 6 cut(s) 563, 815, 997, 1084, 1546, 1589
CviQI GTAC 2 cut(s) 202, 1393
DdeI CTNAG 9 cut(s) 205, 645, 838, 894, 1031, 1121, 1170, 1257, 1597
DpnI GATC 7 cut(s) 102, 227, 294, 438, 633, 1028, 1092
DpnII GATC 7 cut(s) 100, 225, 292, 436, 631, 1026, 1090
DraI TTTAAA 1 cut(s) 1248
DrdI GACNNNNNNGTC 2 cut(s) 418, 634
DseDI GACNNNNNNGTC 2 cut(s) 418, 634
Eam1104I CTCTTC 5 cut(s) 271, 464, 797, 1222, 1668
EarI CTCTTC 5 cut(s) 271, 464, 797, 1222, 1668
Eco130I CCWWGG 3 cut(s) 247, 1545, 1668
Eco147I AGGCCT 1 cut(s) 1501
Eco47I GGWCC 1 cut(s) 991
Eco57I CTGAAG 1 cut(s) 470
Eco88I CYCGRG 1 cut(s) 1437
EcoO109I RGGNCCY 1 cut(s) 232
EcoRII CCWGG 4 cut(s) 173, 439, 650, 1325
EcoT14I CCWWGG 3 cut(s) 247, 1545, 1668
ErhI CCWWGG 3 cut(s) 247, 1545, 1668
Esp3I CGTCTC 1 cut(s) 28
FaeI CATG 6 cut(s) 566, 818, 1000, 1087, 1549, 1592
FalI AAGNNNNNCTT 2 cut(s) 852, 884
FaqI GGGAC 4 cut(s) 122, 361, 424, 1536
FatI CATG 6 cut(s) 562, 814, 996, 1083, 1545, 1588
FauI CCCGC 2 cut(s) 41, 471
FbaI TGATCA 1 cut(s) 1090
Fnu4HI GCNGC 2 cut(s) 737, 1570
FokI GGATG 8 cut(s) 92, 446, 545, 876, 1013, 1100, 1217, 1685
Fsp4HI GCNGC 2 cut(s) 737, 1570
FspBI CTAG 4 cut(s) 530, 855, 875, 1020
GlaI GCGC 2 cut(s) 46, 455
GluI GCNGC 2 cut(s) 737, 1570
GsaI CCCAGC 1 cut(s) 411
HaeIII GGCC 5 cut(s) 233, 245, 1106, 1501, 1584
HapII CCGG 2 cut(s) 154, 1267
HgaI GACGC 1 cut(s) 515
HhaI GCGC 2 cut(s) 47, 456
Hin1II CATG 6 cut(s) 566, 818, 1000, 1087, 1549, 1592
Hin6I GCGC 2 cut(s) 45, 454
HinP1I GCGC 2 cut(s) 45, 454
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HindIII AAGCTT 1 cut(s) 622
HpaII CCGG 2 cut(s) 154, 1267
HphI GGTGA 1 cut(s) 608
Hpy166II GTNNAC 5 cut(s) 259, 553, 616, 994, 1395
Hpy188I TCNGA 6 cut(s) 105, 777, 1069, 1095, 1171, 1689
Hpy188III TCNNGA 7 cut(s) 143, 320, 497, 530, 955, 1439, 1457
Hpy8I GTNNAC 5 cut(s) 259, 553, 616, 994, 1395
HpyAV CCTTC 8 cut(s) 154, 334, 511, 934, 1123, 1360, 1512, 1620
HpyCH4III ACNGT 3 cut(s) 185, 768, 1220
HpyCH4IV ACGT 3 cut(s) 1382, 1638, 1656
HpyF10VI GCNNNNNNNGC 9 cut(s) 42, 124, 404, 490, 736, 967, 1262, 1450, 1620
HpyF3I CTNAG 9 cut(s) 205, 645, 838, 894, 1031, 1121, 1170, 1257, 1597
HpySE526I ACGT 3 cut(s) 1382, 1638, 1656
Hsp92II CATG 6 cut(s) 566, 818, 1000, 1087, 1549, 1592
HspAI GCGC 2 cut(s) 45, 454
Ksp22I TGATCA 1 cut(s) 1090
Kzo9I GATC 7 cut(s) 100, 225, 292, 436, 631, 1026, 1090
LguI GCTCTTC 1 cut(s) 1668
LmnI GCTCC 6 cut(s) 481, 502, 654, 750, 1232, 1441
Lsp1109I GCAGC 1 cut(s) 723
LweI GCATC 5 cut(s) 105, 502, 666, 854, 1175
MaeI CTAG 4 cut(s) 530, 855, 875, 1020
MaeII ACGT 3 cut(s) 1382, 1638, 1656
MaeIII GTNAC 4 cut(s) 95, 817, 1374, 1639
MalI GATC 7 cut(s) 102, 227, 294, 438, 633, 1028, 1092
MboI GATC 7 cut(s) 100, 225, 292, 436, 631, 1026, 1090
MboII GAAGA 9 cut(s) 169, 288, 349, 481, 814, 825, 986, 1239, 1655
MfeI CAATTG 3 cut(s) 296, 585, 789
MflI RGATCY 1 cut(s) 1026
MhlI GDGCHC 2 cut(s) 1237, 1633
MlyI GAGTC 2 cut(s) 254, 1602
MmeI TCCRAC 1 cut(s) 1365
MseI TTAA 4 cut(s) 704, 1247, 1320, 1650
MslI CAYNNNNRTG 1 cut(s) 999
MspA1I CMGCKG 1 cut(s) 1601
MspI CCGG 2 cut(s) 154, 1267
MspR9I CCNGG 5 cut(s) 175, 441, 652, 1267, 1327
MunI CAATTG 3 cut(s) 296, 585, 789
MvaI CCWGG 4 cut(s) 175, 441, 652, 1327
MvnI CGCG 2 cut(s) 60, 456
MwoI GCNNNNNNNGC 9 cut(s) 42, 124, 404, 490, 736, 967, 1262, 1450, 1620
NciI CCSGG 1 cut(s) 1267
NcoI CCATGG 1 cut(s) 1545
NdeII GATC 7 cut(s) 100, 225, 292, 436, 631, 1026, 1090
NlaIII CATG 6 cut(s) 566, 818, 1000, 1087, 1549, 1592
NlaIV GGNNCC 2 cut(s) 992, 1368
NmuCI GTSAC 1 cut(s) 95
PaqCI CACCTGC 1 cut(s) 50
PceI AGGCCT 1 cut(s) 1501
PciSI GCTCTTC 1 cut(s) 1668
PcsI WCGNNNNNNNCGW 1 cut(s) 14
PfeI GAWTC 8 cut(s) 698, 772, 1013, 1046, 1096, 1270, 1344, 1676
PfoI TCCNGGA 2 cut(s) 439, 650
PkrI GCNGC 2 cut(s) 738, 1571
PleI GAGTC 2 cut(s) 254, 1601
PpsI GAGTC 2 cut(s) 254, 1601
Psp6I CCWGG 4 cut(s) 173, 439, 650, 1325
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 4 cut(s) 173, 439, 650, 1325
PspN4I GGNNCC 2 cut(s) 992, 1368
PspPI GGNCC 3 cut(s) 232, 244, 991
PsuI RGATCY 1 cut(s) 1026
PvuII CAGCTG 1 cut(s) 1601
RsaI GTAC 2 cut(s) 203, 1394
RsaNI GTAC 2 cut(s) 202, 1393
RseI CAYNNNNRTG 1 cut(s) 999
SapI GCTCTTC 1 cut(s) 1668
SaqAI TTAA 4 cut(s) 704, 1247, 1320, 1650
SatI GCNGC 2 cut(s) 737, 1570
Sau3AI GATC 7 cut(s) 100, 225, 292, 436, 631, 1026, 1090
Sau96I GGNCC 3 cut(s) 232, 244, 991
ScaI AGTACT 1 cut(s) 203
SchI GAGTC 2 cut(s) 254, 1602
ScrFI CCNGG 5 cut(s) 175, 441, 652, 1267, 1327
SduI GDGCHC 2 cut(s) 1237, 1633
SfaNI GCATC 5 cut(s) 105, 502, 666, 854, 1175
SfcI CTRYAG 2 cut(s) 122, 1216
SinI GGWCC 1 cut(s) 991
SmiMI CAYNNNNRTG 1 cut(s) 999
SmlI CTYRAG 2 cut(s) 128, 497
SmoI CTYRAG 2 cut(s) 128, 497
SseBI AGGCCT 1 cut(s) 1501
SsiI CCGC 7 cut(s) 34, 58, 209, 273, 478, 1570, 1623
SspMI CTAG 4 cut(s) 530, 855, 875, 1020
StuI AGGCCT 1 cut(s) 1501
StyD4I CCNGG 5 cut(s) 173, 439, 650, 1265, 1325
StyI CCWWGG 3 cut(s) 247, 1545, 1668
TaaI ACNGT 3 cut(s) 185, 768, 1220
TaiI ACGT 3 cut(s) 1385, 1641, 1659
TaqI TCGA 2 cut(s) 144, 1299
TatI WGTACW 2 cut(s) 201, 1392
TauI GCSGC 1 cut(s) 1572
TfiI GAWTC 8 cut(s) 698, 772, 1013, 1046, 1096, 1270, 1344, 1676
Tru1I TTAA 4 cut(s) 704, 1247, 1320, 1650
Tru9I TTAA 4 cut(s) 704, 1247, 1320, 1650
TscAI CASTG 3 cut(s) 190, 1225, 1402
TseFI GTSAC 1 cut(s) 95
TseI GCWGC 1 cut(s) 736
Tsp45I GTSAC 1 cut(s) 95
TspDTI ATGAA 7 cut(s) 96, 579, 690, 810, 953, 1212, 1221
TspGWI ACGGA 2 cut(s) 10, 644
TspRI CASTG 3 cut(s) 190, 1225, 1402
VpaK11BI GGWCC 1 cut(s) 991
XapI RAATTY 3 cut(s) 978, 1243, 1303
XbaI TCTAGA 1 cut(s) 529
XspI CTAG 4 cut(s) 530, 855, 875, 1020
ZrmI AGTACT 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.