Rmu_sc0000675.1_g000047

65-kDa microtubule-associated protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000675.1
Physical Location & Seq
Forward (+)
185301 .. 190649
5349 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000675.1_g000047.1.cds

Sequence Viewer

Length: 1434 bp
atgcttctccaactcgagcaagaatgcctcgacatctatcggaaaaaggtggaaatgacgagaaagtacagggctgatttgcacaagtccttagccgacggccaagctcaaatcgccgccatcgcctccgctctcggagaacctaattcgtttccaagggcaagagggaccctcagggaccagatatcctccgtgaagcctgttttggacgaactgagcttgaagaagcaggaaagggtgagggacttttcggtaattcaaacacagattgcgaggatttcgtctgaaatagccgggaacggcctggctaagaatgccggtgaggatgccggagtggatgagcgtgatttgactgtgaagcggttgggagagcttaagtcccaccttgacgaacttcacaaagaaaaggctttacgtttacagaaggtcaatagtcatgtcaataccatccatgacctctcagttgtaatgtccattgatttctttaggacactcgaagaagtccacccaagcttgagtgatcagtccgccgctcattccaagagcatcagcaatgacactcttgctagattgaccgcgctgaccaactcgctgaagcaagagaaacagcagagactgcaaaagactgaggctgaagtcgagcggttgaatgttttgaaagccagcaagatgaaggagttggtctttaagaggcaaaatgagctcgaagaactttatagaggagtccacatggatgtagatagtgatggagctagacagattctcagcagcctcatagattctggtaatgttaatttgtctgatctgctttcaagcatggatgatcagattgtaaaggcaaaagagcaagctttaagcagaaaggatattttggataaggtagagaaatgcaaatttgcatttgaggaggacaagtggcttgatgagtatgaaaaggatgaaaatcgatatagtgcaggaagaggagcacacaaaaatttgaagcgtgctgagaaagcccggattttggttgcaaaaataccatctatcattgaaagtctaactgccagagttaaagcatgggagagcgagaaaggagtccctttcttatacgacaaggttccccttttacatatcttggaggagtacgctgcacaacggcaggagagagaggaggaaaaacgtaaatctcgggagcaaaaacgtctgcaagaacaacatgcgacggaacaggaggcactatttggttcaaggccctctacaaagaagccattgggacaaagcaccaatgccaataccatgattgggaccccaattagtcgtcgtacaagtaccccttcgggccgtcatggagtgtcagctgcaaaagaacgcagagaaagtgggagggccaacataacacctgttaactatgttgctcttccaaaggatgattctgttgctcggagaaattga

Protein Analysis

477

Amino Acids

53.93

Weight (kDa)

9.11

Isoelectric Point (pI)

47.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012187)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 3 cut(s) 131, 533, 643
AccII CGCG 1 cut(s) 578
AciI CCGC 7 cut(s) 117, 129, 361, 528, 531, 576, 643
AcoI YGGCCR 1 cut(s) 100
AcsI RAATTY 2 cut(s) 893, 976
AcuI CTGAAG 2 cut(s) 614, 654
AfaI GTAC 4 cut(s) 68, 1127, 1306, 1312
AfiI CCNNNNNNNGG 2 cut(s) 1006, 1284
AflII CTTAAG 1 cut(s) 374
AgsI TTSAA 8 cut(s) 223, 260, 649, 658, 813, 982, 1034, 1230
AjnI CCWGG 1 cut(s) 303
AjuI GAANNNNNNNTTGG 4 cut(s) 188, 220, 1396, 1428
AluBI AGCT 8 cut(s) 107, 219, 373, 513, 703, 752, 851, 1340
AluI AGCT 8 cut(s) 107, 219, 373, 513, 703, 752, 851, 1340
Alw21I GWGCWC 2 cut(s) 705, 970
Alw26I GTCTC 1 cut(s) 607
AlwNI CAGNNNCTG 1 cut(s) 616
Ama87I CYCGRG 2 cut(s) 14, 1170
AoxI GGCC 5 cut(s) 100, 301, 1232, 1321, 1368
ApeKI GCWGC 3 cut(s) 768, 1130, 1340
ApoI RAATTY 2 cut(s) 893, 976
AspLEI GCGC 1 cut(s) 580
AspS9I GGNCC 6 cut(s) 168, 178, 1233, 1287, 1321, 1368
AsuC2I CCSGG 2 cut(s) 295, 1000
AsuHPI GGTGA 2 cut(s) 250, 332
AvaI CYCGRG 2 cut(s) 14, 1170
AvaII GGWCC 3 cut(s) 168, 178, 1287
AxyI CCTNAGG 1 cut(s) 173
BanII GRGCYC 1 cut(s) 705
Bbv12I GWGCWC 2 cut(s) 705, 970
BbvI GCAGC 3 cut(s) 780, 1117, 1327
BccI CCATC 4 cut(s) 128, 455, 740, 1030
BceAI ACGGC 4 cut(s) 115, 316, 1154, 1308
BciT130I CCWGG 1 cut(s) 305
BclI TGATCA 2 cut(s) 520, 823
BcnI CCSGG 2 cut(s) 295, 1000
BcoDI GTCTC 1 cut(s) 607
BfaI CTAG 2 cut(s) 567, 753
BfrI CTTAAG 1 cut(s) 374
BisI GCNGC 5 cut(s) 117, 531, 769, 1131, 1341
BlsI GCNGC 5 cut(s) 118, 532, 770, 1132, 1342
Bme1390I CCNGG 3 cut(s) 295, 305, 1000
Bme18I GGWCC 3 cut(s) 168, 178, 1287
BmeT110I CYCGRG 2 cut(s) 14, 1170
BmgT120I GGNCC 6 cut(s) 168, 178, 1233, 1287, 1321, 1368
BmiI GGNNCC 6 cut(s) 169, 170, 179, 1101, 1288, 1289
BmrFI CCNGG 3 cut(s) 295, 305, 1000
BmsI GCATC 2 cut(s) 316, 555
BplI GAGNNNNNCTC 2 cut(s) 156, 188
Bpu10I CCTNAGC 1 cut(s) 91
BpuEI CTTGAG 1 cut(s) 535
BpuMI CCSGG 2 cut(s) 295, 1000
Bsa29I ATCGAT 1 cut(s) 946
BsaBI GATNNNNATC 1 cut(s) 942
BsaJI CCNNGG 1 cut(s) 155
BsaXI ACNNNNNCTCC 2 cut(s) 899, 929
Bsc4I CCNNNNNNNGG 2 cut(s) 1006, 1284
Bse118I RCCGGY 1 cut(s) 317
Bse21I CCTNAGG 1 cut(s) 173
Bse3DI GCAATG 1 cut(s) 559
Bse8I GATNNNNATC 1 cut(s) 942
BseBI CCWGG 1 cut(s) 305
BseCI ATCGAT 1 cut(s) 946
BseDI CCNNGG 1 cut(s) 155
BseGI GGATG 7 cut(s) 331, 343, 447, 739, 826, 943, 1414
BseJI GATNNNNATC 1 cut(s) 942
BseLI CCNNNNNNNGG 2 cut(s) 1006, 1284
BseMI GCAATG 1 cut(s) 559
BseMII CTCAG 6 cut(s) 187, 206, 474, 618, 778, 981
BseRI GAGGAG 5 cut(s) 735, 920, 978, 1136, 1166
BseXI GCAGC 3 cut(s) 780, 1117, 1327
BsgI GTGCAG 2 cut(s) 975, 1116
Bsh1236I CGCG 1 cut(s) 578
BshFI GGCC 5 cut(s) 102, 303, 1234, 1323, 1370
BshVI ATCGAT 1 cut(s) 946
BsiHKAI GWGCWC 2 cut(s) 705, 970
BsiHKCI CYCGRG 2 cut(s) 14, 1170
BsiSI CCGG 4 cut(s) 294, 318, 330, 1000
BslFI GGGAC 7 cut(s) 181, 191, 257, 364, 1064, 1269, 1300
BslI CCNNNNNNNGG 2 cut(s) 1006, 1284
BsmAI GTCTC 1 cut(s) 607
BsmFI GGGAC 7 cut(s) 181, 191, 257, 364, 1064, 1269, 1300
BsmI GAATGC 2 cut(s) 29, 319
BsnI GGCC 5 cut(s) 102, 303, 1234, 1323, 1370
BsoBI CYCGRG 2 cut(s) 14, 1170
Bsp1286I GDGCHC 2 cut(s) 705, 970
Bsp143I GATC 3 cut(s) 520, 802, 823
BspACI CCGC 7 cut(s) 117, 129, 361, 528, 531, 576, 643
BspANI GGCC 5 cut(s) 102, 303, 1234, 1323, 1370
BspCNI CTCAG 6 cut(s) 186, 207, 473, 619, 777, 982
BspDI ATCGAT 1 cut(s) 946
BspFNI CGCG 1 cut(s) 578
BspLI GGNNCC 6 cut(s) 169, 170, 179, 1101, 1288, 1289
BspQI GCTCTTC 1 cut(s) 1404
BspTI CTTAAG 1 cut(s) 374
BsrBI CCGCTC 3 cut(s) 131, 533, 643
BsrDI GCAATG 1 cut(s) 559
BsrFI RCCGGY 1 cut(s) 317
BssAI RCCGGY 1 cut(s) 317
BssECI CCNNGG 1 cut(s) 155
BssMI GATC 3 cut(s) 520, 802, 823
BssT1I CCWWGG 1 cut(s) 155
Bst2UI CCWGG 1 cut(s) 305
Bst4CI ACNGT 1 cut(s) 355
Bst6I CTCTTC 2 cut(s) 955, 1404
BstAFI CTTAAG 1 cut(s) 374
BstAPI GCANNNNNTGC 1 cut(s) 616
BstC8I GCNNGC 3 cut(s) 664, 849, 987
BstDEI CTNAG 8 cut(s) 91, 173, 215, 309, 460, 627, 764, 990
BstF5I GGATG 7 cut(s) 331, 343, 447, 739, 826, 943, 1414
BstFNI CGCG 1 cut(s) 578
BstHHI GCGC 1 cut(s) 580
BstKTI GATC 3 cut(s) 523, 805, 826
BstMAI GTCTC 1 cut(s) 607
BstMBI GATC 3 cut(s) 520, 802, 823
BstMWI GCNNNNNNNGC 6 cut(s) 113, 122, 314, 616, 700, 995
BstNI CCWGG 1 cut(s) 305
BstNSI RCATGY 1 cut(s) 1202
BstSCI CCNGG 3 cut(s) 293, 303, 998
BstUI CGCG 1 cut(s) 578
BstV1I GCAGC 3 cut(s) 780, 1117, 1327
Bsu15I ATCGAT 1 cut(s) 946
Bsu36I CCTNAGG 1 cut(s) 173
BsuRI GGCC 5 cut(s) 102, 303, 1234, 1323, 1370
BsuTUI ATCGAT 1 cut(s) 946
BtgZI GCGATG 1 cut(s) 106
BtsCI GGATG 7 cut(s) 331, 343, 447, 739, 826, 943, 1414
Cac8I GCNNGC 3 cut(s) 664, 849, 987
CaiI CAGNNNCTG 1 cut(s) 616
CfoI GCGC 1 cut(s) 580
Cfr10I RCCGGY 1 cut(s) 317
Cfr13I GGNCC 6 cut(s) 168, 178, 1233, 1287, 1321, 1368
ClaI ATCGAT 1 cut(s) 946
Csp6I GTAC 4 cut(s) 67, 1126, 1305, 1311
CviAII CATG 8 cut(s) 437, 452, 730, 817, 1059, 1199, 1279, 1328
CviQI GTAC 4 cut(s) 67, 1126, 1305, 1311
DdeI CTNAG 8 cut(s) 91, 173, 215, 309, 460, 627, 764, 990
DpnI GATC 3 cut(s) 522, 804, 825
DpnII GATC 3 cut(s) 520, 802, 823
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 2 cut(s) 955, 1404
EarI CTCTTC 2 cut(s) 955, 1404
EciI GGCGGA 1 cut(s) 517
Ecl136II GAGCTC 1 cut(s) 703
Eco130I CCWWGG 1 cut(s) 155
Eco24I GRGCYC 1 cut(s) 705
Eco32I GATATC 1 cut(s) 186
Eco47I GGWCC 3 cut(s) 168, 178, 1287
Eco53kI GAGCTC 1 cut(s) 703
Eco57I CTGAAG 2 cut(s) 614, 654
Eco81I CCTNAGG 1 cut(s) 173
Eco88I CYCGRG 2 cut(s) 14, 1170
EcoICRI GAGCTC 1 cut(s) 703
EcoO109I RGGNCCY 3 cut(s) 168, 1233, 1287
EcoRII CCWGG 1 cut(s) 303
EcoRV GATATC 1 cut(s) 186
EcoT14I CCWWGG 1 cut(s) 155
EcoT38I GRGCYC 1 cut(s) 705
ErhI CCWWGG 1 cut(s) 155
FaeI CATG 8 cut(s) 440, 455, 733, 820, 1062, 1202, 1282, 1331
FalI AAGNNNNNCTT 2 cut(s) 1300, 1332
FaqI GGGAC 7 cut(s) 181, 191, 257, 364, 1064, 1269, 1300
FatI CATG 8 cut(s) 436, 451, 729, 816, 1058, 1198, 1278, 1327
FbaI TGATCA 2 cut(s) 520, 823
Fnu4HI GCNGC 5 cut(s) 117, 531, 769, 1131, 1341
FokI GGATG 7 cut(s) 338, 350, 434, 746, 833, 950, 1421
FriOI GRGCYC 1 cut(s) 705
Fsp4HI GCNGC 5 cut(s) 117, 531, 769, 1131, 1341
FspBI CTAG 2 cut(s) 567, 753
GlaI GCGC 1 cut(s) 579
GluI GCNGC 5 cut(s) 117, 531, 769, 1131, 1341
HaeIII GGCC 5 cut(s) 102, 303, 1234, 1323, 1370
HapII CCGG 4 cut(s) 294, 318, 330, 1000
HhaI GCGC 1 cut(s) 580
Hin1II CATG 8 cut(s) 440, 455, 733, 820, 1062, 1202, 1282, 1331
Hin6I GCGC 1 cut(s) 578
HinP1I GCGC 1 cut(s) 578
HincII GTYRAC 1 cut(s) 1387
HindII GTYRAC 1 cut(s) 1387
HindIII AAGCTT 2 cut(s) 511, 849
HinfI GANTC 5 cut(s) 723, 760, 779, 1077, 1412
HpaI GTTAAC 1 cut(s) 1387
HpaII CCGG 4 cut(s) 294, 318, 330, 1000
HphI GGTGA 2 cut(s) 250, 332
Hpy166II GTNNAC 4 cut(s) 419, 505, 727, 1387
Hpy188I TCNGA 6 cut(s) 42, 137, 286, 802, 828, 1425
Hpy188III TCNNGA 1 cut(s) 1172
Hpy8I GTNNAC 4 cut(s) 419, 505, 727, 1387
Hpy99I CGWCG 3 cut(s) 101, 1207, 1305
HpyAV CCTTC 3 cut(s) 418, 667, 1326
HpyCH4III ACNGT 1 cut(s) 355
HpyCH4IV ACGT 3 cut(s) 415, 1162, 1183
HpyCH4V TGCA 9 cut(s) 82, 619, 891, 899, 956, 1013, 1133, 1189, 1343
HpyF10VI GCNNNNNNNGC 6 cut(s) 113, 122, 314, 616, 700, 995
HpyF3I CTNAG 8 cut(s) 91, 173, 215, 309, 460, 627, 764, 990
HpySE526I ACGT 3 cut(s) 415, 1162, 1183
Hsp92II CATG 8 cut(s) 440, 455, 733, 820, 1062, 1202, 1282, 1331
HspAI GCGC 1 cut(s) 578
KflI GGGWCCC 2 cut(s) 168, 1287
Ksp22I TGATCA 2 cut(s) 520, 823
KspAI GTTAAC 1 cut(s) 1387
Kzo9I GATC 3 cut(s) 520, 802, 823
LguI GCTCTTC 1 cut(s) 1404
LmnI GCTCC 3 cut(s) 749, 965, 1174
Lsp1109I GCAGC 3 cut(s) 780, 1117, 1327
LweI GCATC 2 cut(s) 316, 555
MaeI CTAG 2 cut(s) 567, 753
MaeII ACGT 3 cut(s) 415, 1162, 1183
MalI GATC 3 cut(s) 522, 804, 825
MbiI CCGCTC 3 cut(s) 131, 533, 643
MboI GATC 3 cut(s) 520, 802, 823
MboII GAAGA 5 cut(s) 235, 509, 719, 972, 1391
MhlI GDGCHC 2 cut(s) 705, 970
MluCI AATT 7 cut(s) 145, 255, 793, 893, 976, 1293, 1429
MlyI GAGTC 2 cut(s) 732, 1086
MmeI TCCRAC 1 cut(s) 34
MseI TTAA 6 cut(s) 375, 687, 792, 854, 1053, 1386
MslI CAYNNNNRTG 1 cut(s) 732
MspA1I CMGCKG 1 cut(s) 1340
MspCI CTTAAG 1 cut(s) 374
MspI CCGG 4 cut(s) 294, 318, 330, 1000
MspR9I CCNGG 3 cut(s) 295, 305, 1000
Mva1269I GAATGC 2 cut(s) 29, 319
MvaI CCWGG 1 cut(s) 305
MvnI CGCG 1 cut(s) 578
MwoI GCNNNNNNNGC 6 cut(s) 113, 122, 314, 616, 700, 995
NciI CCSGG 2 cut(s) 295, 1000
NdeII GATC 3 cut(s) 520, 802, 823
NlaIII CATG 8 cut(s) 440, 455, 733, 820, 1062, 1202, 1282, 1331
NlaIV GGNNCC 6 cut(s) 169, 170, 179, 1101, 1288, 1289
NspI RCATGY 1 cut(s) 1202
PaeR7I CTCGAG 1 cut(s) 14
PciSI GCTCTTC 1 cut(s) 1404
PctI GAATGC 2 cut(s) 29, 319
PfeI GAWTC 3 cut(s) 760, 779, 1412
PkrI GCNGC 5 cut(s) 118, 532, 770, 1132, 1342
PleI GAGTC 2 cut(s) 731, 1085
PpsI GAGTC 2 cut(s) 731, 1085
PpuMI RGGWCCY 2 cut(s) 168, 1287
Psp124BI GAGCTC 1 cut(s) 705
Psp5II RGGWCCY 2 cut(s) 168, 1287
Psp6I CCWGG 1 cut(s) 303
PspGI CCWGG 1 cut(s) 303
PspN4I GGNNCC 6 cut(s) 169, 170, 179, 1101, 1288, 1289
PspPI GGNCC 6 cut(s) 168, 178, 1233, 1287, 1321, 1368
PspPPI RGGWCCY 2 cut(s) 168, 1287
PspXI VCTCGAGB 1 cut(s) 14
PstNI CAGNNNCTG 1 cut(s) 616
PvuII CAGCTG 1 cut(s) 1340
RsaI GTAC 4 cut(s) 68, 1127, 1306, 1312
RsaNI GTAC 4 cut(s) 67, 1126, 1305, 1311
RseI CAYNNNNRTG 1 cut(s) 732
SacI GAGCTC 1 cut(s) 705
SapI GCTCTTC 1 cut(s) 1404
SaqAI TTAA 6 cut(s) 375, 687, 792, 854, 1053, 1386
SatI GCNGC 5 cut(s) 117, 531, 769, 1131, 1341
Sau3AI GATC 3 cut(s) 520, 802, 823
Sau96I GGNCC 6 cut(s) 168, 178, 1233, 1287, 1321, 1368
SchI GAGTC 2 cut(s) 732, 1086
ScrFI CCNGG 3 cut(s) 295, 305, 1000
SduI GDGCHC 2 cut(s) 705, 970
SfaNI GCATC 2 cut(s) 316, 555
Sfr274I CTCGAG 1 cut(s) 14
SinI GGWCC 3 cut(s) 168, 178, 1287
SlaI CTCGAG 1 cut(s) 14
SmiMI CAYNNNNRTG 1 cut(s) 732
SmlI CTYRAG 3 cut(s) 14, 374, 514
SmoI CTYRAG 3 cut(s) 14, 374, 514
Sse9I AATT 7 cut(s) 145, 255, 793, 893, 976, 1293, 1429
SsiI CCGC 7 cut(s) 117, 129, 361, 528, 531, 576, 643
SspMI CTAG 2 cut(s) 567, 753
SstI GAGCTC 1 cut(s) 705
StyD4I CCNGG 3 cut(s) 293, 303, 998
StyI CCWWGG 1 cut(s) 155
TaaI ACNGT 1 cut(s) 355
TaiI ACGT 3 cut(s) 418, 1165, 1186
TaqI TCGA 6 cut(s) 15, 30, 495, 639, 705, 946
TasI AATT 7 cut(s) 145, 255, 793, 893, 976, 1293, 1429
TatI WGTACW 1 cut(s) 66
TauI GCSGC 2 cut(s) 119, 533
TfiI GAWTC 3 cut(s) 760, 779, 1412
Tru1I TTAA 6 cut(s) 375, 687, 792, 854, 1053, 1386
Tru9I TTAA 6 cut(s) 375, 687, 792, 854, 1053, 1386
TseI GCWGC 3 cut(s) 768, 1130, 1340
TspDTI ATGAA 3 cut(s) 686, 945, 954
TspGWI ACGGA 2 cut(s) 181, 1220
Vha464I CTTAAG 1 cut(s) 374
VpaK11BI GGWCC 3 cut(s) 168, 178, 1287
XapI RAATTY 2 cut(s) 893, 976
XceI RCATGY 1 cut(s) 1202
XhoI CTCGAG 1 cut(s) 14
XspI CTAG 2 cut(s) 567, 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.