Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0009011

Physical Location & Seq

Genomic Coordinates Forward (+)

7707849 .. 7713901

Gene Structure 6053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1079700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGCTATAACTATAGTTTCAAATATGCAAACCCAACGGCTAATTTTGAGAAATGTAGCTCCCAGAACCCTCACAACCTTCACAAAACCAACCAAGTACTCACTCTTTCACTCTCATAGACCTCATTCTTTTGCTTATTGTCCACCAAATGACCTGGAACTTGGTCTTAAAAGTATGCAATCCCAAGAACTCTGTAGTAGTACAAGCCAAGAACCGTTTTCGTCAGCTTCTCTATCAGATTCTCTTTTGGTGGAAAAGATTTTATTAGGTTTGAAGCAAGGTACCCTCACGTCCTTGCGCAGTTTTCGGTTAAACCCATTTCTTATTGTTGAAGTTCTTTCTCGCTGCCGTGAAAATTTGCAACTGGGTCTGAAGTTTGTTGATTTGATTCTGTTAAATAGCCATAATTTTAAACATTCGTCAGAATCTCTGAGTGCAATGATTCACATGTTGGTGCGTGGTCGAAGGGTGTCGGATGCACAACCTCTGATTCTTAGAATGGTTAGAAAGAGTGGCATTTCGCGTGTTGGAGTGGCAGACTCTTTGGTTTCAACTTATAGCAGTTGCGGCTCAAGTTCTTTGATCTTTGATCTGTTTGTTAGAACGTATGTGCAGGCTAAGAAGTTGAGAGAAGGATTTGAGGCGTTTCAGGTGTTTAGAAGAAAGGGATTTTGTGTTTCGATAAATGCTTGCAATAGTCTTCTTGGTGGGCTTGTGAAGGTCGGGTGGTTTGATTTGGCATGGGTGGTCTACGGGGAAGTTGTTAGCAGTGGGATTCAGTTAAACGTTTATACACTAAATATAATGGTTAATGCCTTATGCAAAGCTCGCAAAATTGAGAGCGTTAAATTCTTCTTATCGGATATGGAAGAGAAGGGGGTGTTTTCAGATATTGTGACATATAATACACTAATCAATGCATATTGTCGCGAAGGGCTTCTAGAAGAAGCTTTTCAGTTAAAGAACTCTATGTCTTCTAAGGGGTTGAAACCTGAGCTTTTCACGTACAATGCTATCATGAATGGTTTATGTAAAGTAGGAAATTATGCAAGAGCAAAGGAACTGTTGGATGAAATGTTGCAAGGTGGATTGAATCCTGATACTACTACTTATAATACAATGCTTTTTGAGAGCTGTAGAAAAGGTGATATTTTAGAGGCTGAGGAAATTTTCCATGAAATGTCACTGAGAGGTGTTGTTCCTGATATAGTTAGTTTCAGTTCACTTATTGGGGTTTTTTCGAGGAACAAAAATATTGATCGTGCGTTACTATATTTTCGAGATATGAAAAGGGCAGGCTTGGTTCCAGATAATGTGATCTACACCATTCTTATAGATGGATATTGTAGAAAGGGAATGATGTTAGAGGCTTTGAAGCTGCGTGATGAAATGCTTGAGCAAGGTTGCACTATTGATGTGGTAACGTTCAATACAATTTTAAATGGACTGTGTCGAGAGAAAATGCTTTCTGATGCAGATGAGCTTTTCAATGAAATGTTGGAAAGGGGTGTCATTCCTGATTTTTATACTTTCACAACGCTCATTCATGGCTATTGCAAGCACGGGAATATGACTAAATCTCTCAATCTGTTTGATGCAATGACTAATGGAAATATTAAGCCTGATATTGTCACATACAACACATTGTTTGATGGCTTCTGCAAACTAGGTGAAATGGATAAAGCTAAGGAGTTATGGGGTGACATGGTTTCAAGAAGGATATTACCCAATCACATTTCATATGGCATCCTAATCAATGGATTTTGTAGCTTGGGGAACGTGCATGAGGCGTTTAGGTTGTGGGACCAGATGATTGAAGAAGGCATCAAACCCACTCTAGTTACTTGTAACACTGTCATTAAAGGTTATTGCCGCTCTGGTGACACAACAAAGGCAGATGAGTTCTTAGGCAAAATGATTTCAAAAGGAGTTGTTCCTGACAGTATTACTTACAACACTTTGATTAACGGATATGTAAAAGAAGAGAATCTGAACAAAGCATTTTCCTCAGTTCAGGAGATGGAAAAGCAAGGGATACTGTCGGATCAGTTTACATACAATATAATTCTAAATGGGTTCTGTAGGCAAGGTAGAATGCACGAAGCCGAGCTAGTATTGCGGAAGATGATTGAGAGAGGTGTAAAACCTGATAGATCCACTTATACGTCATTGATAAATGGACATGTGACCCAGGACAATTTGAAGGAGGCATTTCGGTTCCATGATGAGATGCTTCAAAGGGGATTTGTGCCAGATGATGAATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3 PPR_long

Protein Analysis

756

Amino Acids

85.35

Weight (kDa)

7.76

Isoelectric Point (pI)

34.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	228 - 275	1e-09	PPR repeat family
PPR_long	PF17177	247 - 383	2.2e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	286 - 341	7.1e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	292 - 324	3.7e-13	PPR repeat
PPR_2	PF13041	297 - 344	3.3e-18	PPR repeat family
TPR_24	PF23276	298 - 393	9.3e-07	Fungal tetratrico peptide repeats
PPR	PF01535	299 - 329	4.2e-09	PPR repeat
PPR_1	PF12854	327 - 359	1.6e-10	PPR repeat
PPR_2	PF13041	332 - 379	1.3e-13	PPR repeat family
PPR	PF01535	334 - 363	1.1e-06	PPR repeat
PPR_3	PF13812	355 - 414	5.6e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	363 - 395	7.5e-09	PPR repeat
PPR_2	PF13041	367 - 413	1.1e-10	PPR repeat family
PPR_2	PF13041	401 - 447	9.4e-10	PPR repeat family
PPR_3	PF13812	426 - 481	1.4e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	433 - 464	6.2e-12	PPR repeat
PPR_2	PF13041	436 - 485	1e-17	PPR repeat family
PPR	PF01535	439 - 469	2e-09	PPR repeat
PPR_long	PF17177	450 - 626	1.4e-10	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	468 - 499	1.3e-10	PPR repeat
PPR_2	PF13041	472 - 520	2.1e-19	PPR repeat family
PPR	PF01535	474 - 504	2.4e-08	PPR repeat
PPR_3	PF13812	495 - 550	7.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	502 - 534	3.1e-10	PPR repeat
PPR	PF01535	509 - 536	1.5e-06	PPR repeat
PPR_2	PF13041	510 - 555	2.4e-16	PPR repeat family
PPR_3	PF13812	530 - 587	1.4e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	538 - 570	5.4e-11	PPR repeat
PPR_2	PF13041	541 - 589	5.2e-18	PPR repeat family
PPR	PF01535	544 - 574	2e-08	PPR repeat
PPR_3	PF13812	567 - 623	5.9e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	574 - 604	2.2e-11	PPR repeat
PPR	PF01535	579 - 609	8.1e-08	PPR repeat
PPR_2	PF13041	581 - 615	4.8e-08	PPR repeat family
PPR_3	PF13812	600 - 660	8.2e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	608 - 639	1.2e-06	PPR repeat
PPR_2	PF13041	611 - 660	5.9e-16	PPR repeat family
PPR	PF01535	614 - 644	1.8e-07	PPR repeat
PPR_long	PF17177	638 - 731	2.1e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	638 - 692	1.4e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	642 - 675	5.5e-09	PPR repeat
PPR_2	PF13041	646 - 695	1.2e-17	PPR repeat family
PPR	PF01535	649 - 679	3.1e-06	PPR repeat
PPR_3	PF13812	671 - 726	1.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	678 - 709	3.5e-11	PPR repeat
PPR_2	PF13041	682 - 728	9.6e-16	PPR repeat family
PPR	PF01535	684 - 714	3.3e-08	PPR repeat
PPR_1	PF12854	712 - 744	7.2e-07	PPR repeat
PPR_2	PF13041	720 - 753	5.3e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0009011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01110 AT5G01110
fragaria_vesca	FvH4_3g27950 FvH4_3g27950
malus_domestica	MD02G1234700.v1.1 MD02G1235100.v1.1 MD07G1079700.v1.1
prunus_persica	Prupe.2G102900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0050671
rosa_laevigata	RLG00000034717 RLG00000034720
rosa_multiflora	Rmu_ssc0000350.1_g000039
rosa_roxburghii	Rroxscaffold_1G00030130
rosa_rugosa	Rorug05G0262900 Rorug05G0263000 Rorug05G0263000 Rorug05G0263000
rosa_samantha	Rh5AG334900 Rh5BG344200 Rh5CG372100 Rh5DG357300
rosa_wichuraiana	Rw5G031590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1113
Acc16I	TGCGCA	1 cut(s)	299
Acc65I	GGTACC	1 cut(s)	281
AccB1I	GGYRCC	1 cut(s)	281
AccBSI	CCGCTC	1 cut(s)	1875
AccI	GTMKAC	1 cut(s)	750
AccII	CGCG	2 cut(s)	523, 930
AciI	CCGC	3 cut(s)	567, 1873, 2119
AclI	AACGTT	2 cut(s)	786, 1424
AclWI	GGATC	2 cut(s)	2052, 2148
AcsI	RAATTY	4 cut(s)	355, 848, 1167, 2261
AcuI	CTGAAG	1 cut(s)	392
AfaI	GTAC	4 cut(s)	98, 202, 283, 1007
AflIII	ACRYGT	2 cut(s)	447, 2182
AjiI	CACGTC	1 cut(s)	291
AjnI	CCWGG	2 cut(s)	153, 2190
AlwI	GGATC	2 cut(s)	2052, 2148
ApeKI	GCWGC	2 cut(s)	345, 1378
ApoI	RAATTY	4 cut(s)	355, 848, 1167, 2261
Asp700I	GAANNNNTTC	2 cut(s)	936, 951
Asp718I	GGTACC	1 cut(s)	281
AspLEI	GCGC	1 cut(s)	300
AspS9I	GGNCC	1 cut(s)	1804
AsuHPI	GGTGA	4 cut(s)	1157, 1682, 1712, 1892
AvaII	GGWCC	1 cut(s)	1804
BanI	GGYRCC	1 cut(s)	281
BbsI	GAAGAC	2 cut(s)	692, 966
BbvCI	CCTCAGC	1 cut(s)	1161
BbvI	GCAGC	2 cut(s)	332, 1365
BccI	CCATC	3 cut(s)	1331, 1646, 2014
BceAI	ACGGC	2 cut(s)	53, 333
BciT130I	CCWGG	2 cut(s)	155, 2192
BciVI	GTATCC	1 cut(s)	2028
BfaI	CTAG	5 cut(s)	941, 1667, 1838, 2111, 2266
BfmI	CTRYAG	4 cut(s)	12, 193, 1135, 2080
BfuI	GTATCC	1 cut(s)	2028
BisI	GCNGC	4 cut(s)	346, 568, 1379, 1873
BlsI	GCNGC	4 cut(s)	347, 569, 1380, 1874
BmcAI	AGTACT	1 cut(s)	98
Bme1390I	CCNGG	2 cut(s)	155, 2192
Bme18I	GGWCC	1 cut(s)	1804
BmgBI	CACGTC	1 cut(s)	291
BmgT120I	GGNCC	1 cut(s)	1804
BmiI	GGNNCC	4 cut(s)	283, 1305, 1805, 2219
BmrFI	CCNGG	2 cut(s)	155, 2192
BmrI	ACTGGG	1 cut(s)	374
BmsI	GCATC	6 cut(s)	466, 1462, 1585, 1755, 1833, 2220
BmuI	ACTGGG	1 cut(s)	374
BpiI	GAAGAC	2 cut(s)	692, 966
Bpu10I	CCTNAGC	3 cut(s)	993, 1161, 1686
BpuEI	CTTGAG	2 cut(s)	556, 1415
BsaAI	YACGTR	1 cut(s)	1005
BsaJI	CCNNGG	1 cut(s)	2190
Bse1I	ACTGG	1 cut(s)	369
Bse3DI	GCAATG	2 cut(s)	444, 1605
BseBI	CCWGG	2 cut(s)	155, 2192
BseDI	CCNNGG	1 cut(s)	2190
BseGI	GGATG	3 cut(s)	481, 1075, 1746
BseMI	GCAATG	2 cut(s)	444, 1605
BseMII	CTCAG	5 cut(s)	422, 984, 1152, 1178, 2022
BseNI	ACTGG	1 cut(s)	369
BseXI	GCAGC	2 cut(s)	332, 1365
BsgI	GTGCAG	1 cut(s)	632
Bsh1236I	CGCG	2 cut(s)	523, 930
BshNI	GGYRCC	1 cut(s)	281
BslFI	GGGAC	1 cut(s)	1817
BsmFI	GGGAC	1 cut(s)	1817
BsmI	GAATGC	1 cut(s)	2100
Bsp143I	GATC	6 cut(s)	582, 589, 1258, 1317, 2044, 2153
Bsp68I	TCGCGA	1 cut(s)	930
BspACI	CCGC	3 cut(s)	567, 1873, 2119
BspCNI	CTCAG	5 cut(s)	423, 985, 1153, 1179, 2021
BspFNI	CGCG	2 cut(s)	523, 930
BspHI	TCATGA	1 cut(s)	1017
BspLI	GGNNCC	4 cut(s)	283, 1305, 1805, 2219
BspPI	GGATC	2 cut(s)	2052, 2148
BspT107I	GGYRCC	1 cut(s)	281
BsrBI	CCGCTC	1 cut(s)	1875
BsrDI	GCAATG	2 cut(s)	444, 1605
BsrI	ACTGG	1 cut(s)	369
BssECI	CCNNGG	1 cut(s)	2190
BssMI	GATC	6 cut(s)	582, 589, 1258, 1317, 2044, 2153
Bst2UI	CCWGG	2 cut(s)	155, 2192
Bst4CI	ACNGT	6 cut(s)	216, 1065, 1449, 1855, 1943, 2040
Bst6I	CTCTTC	2 cut(s)	864, 1977
BstBAI	YACGTR	1 cut(s)	1005
BstC8I	GCNNGC	5 cut(s)	615, 691, 829, 1297, 1559
BstF5I	GGATG	3 cut(s)	481, 1075, 1746
BstFNI	CGCG	2 cut(s)	523, 930
BstHHI	GCGC	1 cut(s)	300
BstKTI	GATC	6 cut(s)	585, 592, 1261, 1320, 2047, 2156
BstMBI	GATC	6 cut(s)	582, 589, 1258, 1317, 2044, 2153
BstMWI	GCNNNNNNNGC	3 cut(s)	567, 828, 2116
BstNI	CCWGG	2 cut(s)	155, 2192
BstNSI	RCATGY	2 cut(s)	451, 2186
BstSCI	CCNGG	2 cut(s)	153, 2190
BstSFI	CTRYAG	4 cut(s)	12, 193, 1135, 2080
BstUI	CGCG	2 cut(s)	523, 930
BstV1I	GCAGC	2 cut(s)	332, 1365
BstV2I	GAAGAC	2 cut(s)	692, 966
BstX2I	RGATCY	1 cut(s)	2153
BstYI	RGATCY	1 cut(s)	2153
BsuI	GTATCC	1 cut(s)	2028
BtrI	CACGTC	1 cut(s)	291
BtsCI	GGATG	3 cut(s)	481, 1075, 1746
BtsI	GCAGTG	1 cut(s)	775
BtsIMutI	CAGTG	3 cut(s)	775, 1184, 1851
BtuMI	TCGCGA	1 cut(s)	930
Cac8I	GCNNGC	5 cut(s)	615, 691, 829, 1297, 1559
CciI	TCATGA	1 cut(s)	1017
CfoI	GCGC	1 cut(s)	300
Cfr13I	GGNCC	1 cut(s)	1804
Csp6I	GTAC	4 cut(s)	97, 201, 282, 1006
CviAII	CATG	9 cut(s)	448, 741, 1018, 1175, 1547, 1705, 1784, 2183, 2222
CviQI	GTAC	4 cut(s)	97, 201, 282, 1006
DpnI	GATC	6 cut(s)	584, 591, 1260, 1319, 2046, 2155
DpnII	GATC	6 cut(s)	582, 589, 1258, 1317, 2044, 2153
DraI	TTTAAA	2 cut(s)	412, 1440
Eam1104I	CTCTTC	2 cut(s)	864, 1977
EarI	CTCTTC	2 cut(s)	864, 1977
Eco47I	GGWCC	1 cut(s)	1804
Eco57I	CTGAAG	1 cut(s)	392
EcoRI	GAATTC	1 cut(s)	2261
EcoRII	CCWGG	2 cut(s)	153, 2190
EcoT22I	ATGCAT	1 cut(s)	922
FaeI	CATG	9 cut(s)	451, 744, 1021, 1178, 1550, 1708, 1787, 2186, 2225
FaqI	GGGAC	1 cut(s)	1817
FatI	CATG	9 cut(s)	447, 740, 1017, 1174, 1546, 1704, 1783, 2182, 2221
FauNDI	CATATG	1 cut(s)	1741
FblI	GTMKAC	1 cut(s)	750
Fnu4HI	GCNGC	4 cut(s)	346, 568, 1379, 1873
FokI	GGATG	3 cut(s)	488, 1082, 1733
Fsp4HI	GCNGC	4 cut(s)	346, 568, 1379, 1873
FspBI	CTAG	5 cut(s)	941, 1667, 1838, 2111, 2266
FspI	TGCGCA	1 cut(s)	299
GlaI	GCGC	1 cut(s)	299
GluI	GCNGC	4 cut(s)	346, 568, 1379, 1873
HhaI	GCGC	1 cut(s)	300
Hin1II	CATG	9 cut(s)	451, 744, 1021, 1178, 1550, 1708, 1787, 2186, 2225
Hin6I	GCGC	1 cut(s)	298
HinP1I	GCGC	1 cut(s)	298
HindIII	AAGCTT	1 cut(s)	948
HinfI	GANTC	9 cut(s)	239, 388, 425, 442, 490, 539, 775, 1093, 1987
HphI	GGTGA	4 cut(s)	1157, 1682, 1712, 1892
Hpy166II	GTNNAC	4 cut(s)	143, 751, 1223, 2052
Hpy8I	GTNNAC	4 cut(s)	143, 751, 1223, 2052
HpyAV	CCTTC	9 cut(s)	88, 459, 626, 712, 868, 926, 1710, 1814, 2197
HpyCH4III	ACNGT	6 cut(s)	216, 1065, 1449, 1855, 1943, 2040
HpyCH4IV	ACGT	7 cut(s)	290, 605, 786, 1004, 1424, 1779, 2165
HpyF10VI	GCNNNNNNNGC	3 cut(s)	567, 828, 2116
HpySE526I	ACGT	7 cut(s)	290, 605, 786, 1004, 1424, 1779, 2165
Hsp92II	CATG	9 cut(s)	451, 744, 1021, 1178, 1550, 1708, 1787, 2186, 2225
HspAI	GCGC	1 cut(s)	298
KpnI	GGTACC	1 cut(s)	285
Kzo9I	GATC	6 cut(s)	582, 589, 1258, 1317, 2044, 2153
LmnI	GCTCC	1 cut(s)	64
Lsp1109I	GCAGC	2 cut(s)	332, 1365
LweI	GCATC	6 cut(s)	466, 1462, 1585, 1755, 1833, 2220
MaeI	CTAG	5 cut(s)	941, 1667, 1838, 2111, 2266
MaeII	ACGT	7 cut(s)	290, 605, 786, 1004, 1424, 1779, 2165
MalI	GATC	6 cut(s)	584, 591, 1260, 1319, 2046, 2155
MbiI	CCGCTC	1 cut(s)	1875
MboI	GATC	6 cut(s)	582, 589, 1258, 1317, 2044, 2153
MboII	GAAGA	9 cut(s)	672, 692, 844, 881, 956, 966, 1829, 1994, 2134
MflI	RGATCY	1 cut(s)	2153
MlyI	GAGTC	1 cut(s)	533
MmeI	TCCRAC	5 cut(s)	453, 508, 1047, 1479, 2022
Mph1103I	ATGCAT	1 cut(s)	922
MroXI	GAANNNNTTC	2 cut(s)	936, 951
MslI	CAYNNNNRTG	1 cut(s)	452
MspR9I	CCNGG	2 cut(s)	155, 2192
Mva1269I	GAATGC	1 cut(s)	2100
MvaI	CCWGG	2 cut(s)	155, 2192
MvnI	CGCG	2 cut(s)	523, 930
MwoI	GCNNNNNNNGC	3 cut(s)	567, 828, 2116
NdeI	CATATG	1 cut(s)	1741
NdeII	GATC	6 cut(s)	582, 589, 1258, 1317, 2044, 2153
NlaIII	CATG	9 cut(s)	451, 744, 1021, 1178, 1550, 1708, 1787, 2186, 2225
NlaIV	GGNNCC	4 cut(s)	283, 1305, 1805, 2219
NmeAIII	GCCGAG	1 cut(s)	2131
NmuCI	GTSAC	6 cut(s)	895, 1182, 1630, 1700, 1880, 2185
NruI	TCGCGA	1 cut(s)	930
NsbI	TGCGCA	1 cut(s)	299
NsiI	ATGCAT	1 cut(s)	922
NspI	RCATGY	2 cut(s)	451, 2186
PagI	TCATGA	1 cut(s)	1017
PciI	ACATGT	2 cut(s)	447, 2182
PctI	GAATGC	1 cut(s)	2100
PdmI	GAANNNNTTC	2 cut(s)	936, 951
PfeI	GAWTC	8 cut(s)	239, 388, 425, 442, 490, 775, 1093, 1987
PflFI	GACNNNGTC	1 cut(s)	1449
PkrI	GCNGC	4 cut(s)	347, 569, 1380, 1874
PleI	GAGTC	1 cut(s)	533
PpsI	GAGTC	1 cut(s)	533
Ppu21I	YACGTR	1 cut(s)	1005
PscI	ACATGT	2 cut(s)	447, 2182
PsiI	TTATAA	1 cut(s)	1113
Psp1406I	AACGTT	2 cut(s)	786, 1424
Psp6I	CCWGG	2 cut(s)	153, 2190
PspGI	CCWGG	2 cut(s)	153, 2190
PspN4I	GGNNCC	4 cut(s)	283, 1305, 1805, 2219
PspPI	GGNCC	1 cut(s)	1804
PsuI	RGATCY	1 cut(s)	2153
PsyI	GACNNNGTC	1 cut(s)	1449
RruI	TCGCGA	1 cut(s)	930
RsaI	GTAC	4 cut(s)	98, 202, 283, 1007
RsaNI	GTAC	4 cut(s)	97, 201, 282, 1006
RseI	CAYNNNNRTG	1 cut(s)	452
SatI	GCNGC	4 cut(s)	346, 568, 1379, 1873
Sau3AI	GATC	6 cut(s)	582, 589, 1258, 1317, 2044, 2153
Sau96I	GGNCC	1 cut(s)	1804
ScaI	AGTACT	1 cut(s)	98
SchI	GAGTC	1 cut(s)	533
ScrFI	CCNGG	2 cut(s)	155, 2192
SfaNI	GCATC	6 cut(s)	466, 1462, 1585, 1755, 1833, 2220
SfcI	CTRYAG	4 cut(s)	12, 193, 1135, 2080
SinI	GGWCC	1 cut(s)	1804
SmiMI	CAYNNNNRTG	1 cut(s)	452
SmlI	CTYRAG	2 cut(s)	571, 1394
SmoI	CTYRAG	2 cut(s)	571, 1394
SsiI	CCGC	3 cut(s)	567, 1873, 2119
SspI	AATATT	2 cut(s)	1255, 1615
SspMI	CTAG	5 cut(s)	941, 1667, 1838, 2111, 2266
StyD4I	CCNGG	2 cut(s)	153, 2190
TaaI	ACNGT	6 cut(s)	216, 1065, 1449, 1855, 1943, 2040
TaiI	ACGT	7 cut(s)	293, 608, 789, 1007, 1427, 1782, 2168
TaqI	TCGA	5 cut(s)	463, 680, 1241, 1279, 1453
TatI	WGTACW	2 cut(s)	96, 200
TauI	GCSGC	2 cut(s)	570, 1875
TfiI	GAWTC	8 cut(s)	239, 388, 425, 442, 490, 775, 1093, 1987
TscAI	CASTG	3 cut(s)	775, 1191, 1858
TseFI	GTSAC	6 cut(s)	895, 1182, 1630, 1700, 1880, 2185
TseI	GCWGC	2 cut(s)	345, 1378
Tsp45I	GTSAC	6 cut(s)	895, 1182, 1630, 1700, 1880, 2185
TspDTI	ATGAA	8 cut(s)	1034, 1086, 1191, 1301, 1401, 1506, 1535, 1728
TspGWI	ACGGA	1 cut(s)	1983
TspRI	CASTG	3 cut(s)	775, 1191, 1858
Tth111I	GACNNNGTC	1 cut(s)	1449
VpaK11BI	GGWCC	1 cut(s)	1804
XapI	RAATTY	4 cut(s)	355, 848, 1167, 2261
XbaI	TCTAGA	1 cut(s)	940
XceI	RCATGY	2 cut(s)	451, 2186
XmiI	GTMKAC	1 cut(s)	750
XmnI	GAANNNNTTC	2 cut(s)	936, 951
XspI	CTAG	5 cut(s)	941, 1667, 1838, 2111, 2266
ZrmI	AGTACT	1 cut(s)	98
Zsp2I	ATGCAT	1 cut(s)	922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.