Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0009011

Physical Location & Seq

Genomic Coordinates Reverse (-)

47735554 .. 47737776

Gene Structure 2223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG372100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGGCACCCAAAGGCCAATTCTGCAAGTGAGAACCCTCACGACCTTCACAAGACACCCAGTGTTTCACTCTCAGAGACCCCATTCTATATCTTCTTGCCCATCAAACCGCTGGTTGGAAAATGGTGTTACACTCGTGCAGTCCAAGCGTACCAGCCAAGAACCCTTTTTATCAGCTTCTCTGTCAGATTCTCTTTTGGTAGAGAAGCTTTTGTTGGGTTTGAAGCAAGGTAATCTCAATTATCTGCGTAACTATCTGTTTTGGTTAAACCCACTTCTTGTTGTTGAACTTGTTTCCCGTTGCCGTGAAAATCTGCATCTGGGTCTGAAATTCGTTGACTTGATTATGTTAAATTGTCCGAATTTCAAGCACTCGTCACAGTCTTTGAGTGCAATGATTCACATTTTGGTCAGGGCCCGAAGGGCTTCGGATGCTCAAGCTTTAATGCTTAGAATGGTTAGGAAGAGTGGTGTCTCCCGTGTTGAAATAGTTGAGTCTTTGGTTTCGACCTGTAGCAGTTGTGGCTCTAGCTGCTTCGTTTTTGACTTGTTGATTAGGACGTATGTGCAAGCTAGGAAGTTGAGAGAAGGGTTCGAGGCGTTTAAGGCACTTAGAAGCAAGGGAGTTGCTGTTTCGATAAATGCTGCTAATAGTCTTCTTGGTGGGCTTGTGAAGGTAGGGTGGGTAGATTTGGCATGGGAAGTGTATGGGGAAGTTGTTAGCAGCAGGGTTCAGTTAAATGTTTATACACTAAACATTATGGTTAATGCCTTGTGTAAAGATGGTAAAATCGATAGGGTTAAATTGTTCATATCGGACATGGCTGAGAAGGGGGTTTGTACAGATATTGTGACATATAATACTCTAATCAATGCCTATTGTCGTGAAGGGCTTGTGGAAGAAGCTTTCCAGTTGAAAAACTCTATGGCTTCTAAGGGTTTGAGACCGGAGCTTTTCACATACAATGCTATCATAAATGGATTATGTAGGGTAGGAAATTATGCGAGGGCAAAGGAAGTTTTGTATGAGATGTTGCAGAATGGATTAAGTCCTGATACTACTACCTTTAATACACTGCTGGTTGAGAGTTGTAGAAAAGATAATATTTCAGAGGCTGAAGGAATTTTTCGTGAAATGTCATGTAGAGGTGTTGTTCCTGATTTAGTCAGCTTCAGTTCAATAATTGGGGTGCTTTTGAGGAATGGACATTGTGATCATGCACTATTATATTTTCAAGAAATGAAAACTGCAGGCTTGGTTCCAGATAATGTGATCTATACTATCCTTATAGACGGATATTGTAGAAATGGCAAAATGTCAGAGGCGTTGAAGTTGCGGGATGAAATGCTTGAGCAAGGCTGCGTGGTGGATGTTATTACCTTCAATACTATTTTAAATGGACTTTGTCGGGAGAAGATGCTTGCTGATGCAGAAAAACTCTTCAATGAGATGGTGGAAAGGGGTGTCTTTCCAGATTTTTATACTTTCACAACACTTATTCATGGTTATTGTAAAAACGGGAATATGGCTAAATCCTTAAGTTTGTTCGAGGCAATGACTTGTAAAAATATCAAGCCTGATATTGTCACGTACAACACATTGATTGATGGATTCTGCAAAGTAGGTGACATGGATAAAGCTAAGGAGCTATGGAGTGACATGGTTTCTAGAAGAATATTCCCTAATTACATTTCATATGGCATTCTTATCAATGGATTCTGTAGCTTGGGACTTGTCCATGAGGCGCTTCGTTTGTGGGACCAGATGATTGAAGAAGGTATCAAACCCACTCTAGTGACTTGTAATACTGTCATAAAGGGCTATAGCCGCTCTGGTGACACAGAAAAGGCATATGAGTTCTTAGGCAAAATGATTTCAAAAGGAATTGTCCCTGATAGTATTACTTACAACACTCTGATTAATGGATATGTAAAAGAAGAAAACCTGGATAAAGCCTTTTTTTCAGTTAAGGAGATGGAAAAGCAAGGACTACTGCCAGATGTGATTACATACAATGTCATTCTATATGGGTTCTGTAGACAGGGTAGACTGCATGAAGCTGAGTTAGTTTTGCGAAAGATGATTGAGAAAGGTGTAAATCCTGATAGATCCACTTATACGTCATTAATAAATGGACATGTGACCCAGGACAATTTGAGAGAGGCATTCCGCTACCATGATGAAATGCTGCAGAGGGGATTTGTACCAGATGATGAATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3 PPR_long

Protein Analysis

740

Amino Acids

83.54

Weight (kDa)

8.08

Isoelectric Point (pI)

34.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	215 - 260	6.3e-09	PPR repeat family
PPR_long	PF17177	229 - 336	2.6e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	272 - 326	8.6e-11	Pentatricopeptide repeat domain
TPR_24	PF23276	276 - 378	2.2e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	277 - 309	3.3e-13	PPR repeat
PPR_2	PF13041	282 - 330	1e-18	PPR repeat family
PPR	PF01535	284 - 314	5.3e-09	PPR repeat
PPR_3	PF13812	305 - 360	5.2e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	312 - 344	2.6e-09	PPR repeat
PPR_2	PF13041	317 - 364	5.2e-12	PPR repeat family
PPR	PF01535	319 - 349	6.7e-07	PPR repeat
PPR_3	PF13812	340 - 398	6.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	347 - 380	2.2e-06	PPR repeat
PPR_2	PF13041	351 - 396	3.9e-09	PPR repeat family
PPR_2	PF13041	386 - 432	1.5e-08	PPR repeat family
TPR_24	PF23276	406 - 516	2.9e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	411 - 466	2.5e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	418 - 449	3.5e-13	PPR repeat
PPR_2	PF13041	421 - 470	2.9e-18	PPR repeat family
PPR	PF01535	424 - 454	2.9e-10	PPR repeat
PPR_long	PF17177	434 - 569	1.5e-10	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	453 - 485	1.8e-12	PPR repeat
PPR_2	PF13041	457 - 505	1.3e-19	PPR repeat family
PPR	PF01535	459 - 489	6.4e-08	PPR repeat
PPR_1	PF12854	487 - 519	3.3e-11	PPR repeat
PPR	PF01535	494 - 524	2.9e-07	PPR repeat
PPR_2	PF13041	495 - 540	6.5e-17	PPR repeat family
PPR_3	PF13812	514 - 572	7e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	522 - 555	1.2e-14	PPR repeat
PPR_2	PF13041	526 - 574	3.4e-19	PPR repeat family
PPR	PF01535	529 - 559	1.2e-09	PPR repeat
PPR_1	PF12854	559 - 589	1.4e-09	PPR repeat
PPR	PF01535	564 - 594	9.4e-08	PPR repeat
PPR_2	PF13041	566 - 600	4.5e-07	PPR repeat family
PPR_long	PF17177	580 - 716	6e-13	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	585 - 645	2.1e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	593 - 624	2.6e-06	PPR repeat
PPR_2	PF13041	596 - 643	2.6e-15	PPR repeat family
PPR	PF01535	599 - 629	9.6e-08	PPR repeat
PPR_1	PF12854	627 - 660	8.5e-09	PPR repeat
PPR_2	PF13041	631 - 680	2.6e-16	PPR repeat family
PPR	PF01535	634 - 664	4.8e-06	PPR repeat
PPR_3	PF13812	656 - 711	2e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	663 - 694	7.3e-12	PPR repeat
PPR_2	PF13041	666 - 713	6.1e-15	PPR repeat family
PPR	PF01535	669 - 699	4.8e-07	PPR repeat
PPR_2	PF13041	705 - 738	4.8e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01110 AT5G01110
fragaria_vesca	FvH4_3g27950 FvH4_3g27950
malus_domestica	MD02G1234700.v1.1 MD02G1235100.v1.1 MD07G1079700.v1.1
prunus_persica	Prupe.2G102900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0050671
rosa_laevigata	RLG00000034717 RLG00000034720
rosa_multiflora	Rmu_ssc0000350.1_g000039
rosa_roxburghii	Rroxscaffold_1G00030130
rosa_rugosa	Rorug05G0262900 Rorug05G0263000 Rorug05G0263000 Rorug05G0263000
rosa_samantha	Rh5AG334900 Rh5BG344200 Rh5CG372100 Rh5DG357300
rosa_wichuraiana	Rw5G031590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	5
AccBSI	CCGCTC	1 cut(s)	1830
AccI	GTMKAC	2 cut(s)	2038, 2047
AciI	CCGC	4 cut(s)	109, 1336, 1828, 2170
AclWI	GGATC	1 cut(s)	2103
AcsI	RAATTY	4 cut(s)	329, 361, 1122, 2216
AcuI	CTGAAG	2 cut(s)	1137, 1156
AdeI	CACNNNGTG	1 cut(s)	61
AfaI	GTAC	4 cut(s)	151, 841, 1592, 2205
AfiI	CCNNNNNNNGG	1 cut(s)	115
AflII	CTTAAG	1 cut(s)	1537
AflIII	ACRYGT	1 cut(s)	2137
AjnI	CCWGG	2 cut(s)	1944, 2145
AjuI	GAANNNNNNNTTGG	3 cut(s)	35, 197, 229
AleI	CACNNNNGTG	1 cut(s)	1793
Alw26I	GTCTC	3 cut(s)	70, 478, 937
AlwI	GGATC	1 cut(s)	2103
AlwNI	CAGNNNCTG	1 cut(s)	1115
AoxI	GGCC	2 cut(s)	14, 414
ApaI	GGGCCC	1 cut(s)	418
ApeKI	GCWGC	5 cut(s)	531, 644, 723, 1359, 2188
ApoI	RAATTY	4 cut(s)	329, 361, 1122, 2216
AseI	ATTAAT	2 cut(s)	1920, 2126
Asp700I	GAANNNNTTC	1 cut(s)	424
AspLEI	GCGC	1 cut(s)	1747
AspS9I	GGNCC	3 cut(s)	414, 415, 1759
AsuHPI	GGTGA	2 cut(s)	1637, 1847
AvaII	GGWCC	1 cut(s)	1759
BaeGI	GKGCMC	2 cut(s)	8, 418
BanI	GGYRCC	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	418
BauI	CACGAG	1 cut(s)	134
BbsI	GAAGAC	1 cut(s)	647
BbvI	GCAGC	5 cut(s)	518, 631, 735, 1346, 2175
BccI	CCATC	5 cut(s)	109, 776, 1444, 1601, 1969
BceAI	ACGGC	1 cut(s)	288
BciT130I	CCWGG	2 cut(s)	1946, 2147
BclI	TGATCA	1 cut(s)	1213
BcoDI	GTCTC	3 cut(s)	70, 478, 937
BfaI	CTAG	5 cut(s)	528, 573, 1668, 1793, 2221
BfmI	CTRYAG	6 cut(s)	511, 1248, 1720, 1822, 2035, 2189
BfoI	RGCGCY	1 cut(s)	1748
BfrI	CTTAAG	1 cut(s)	1537
BglI	GCCNNNNNGGC	1 cut(s)	422
BisI	GCNGC	6 cut(s)	532, 645, 724, 1360, 1828, 2189
BlsI	GCNGC	6 cut(s)	533, 646, 725, 1361, 1829, 2190
Bme1390I	CCNGG	2 cut(s)	1946, 2147
Bme18I	GGWCC	1 cut(s)	1759
BmgT120I	GGNCC	3 cut(s)	414, 415, 1759
BmiI	GGNNCC	4 cut(s)	7, 416, 1260, 1760
BmrFI	CCNGG	2 cut(s)	1946, 2147
BmrI	ACTGGG	1 cut(s)	53
BmsI	GCATC	4 cut(s)	325, 421, 1407, 1417
BmuI	ACTGGG	1 cut(s)	53
BpiI	GAAGAC	1 cut(s)	647
Bpu10I	CCTNAGC	1 cut(s)	1641
BpuEI	CTTGAG	2 cut(s)	420, 1370
Bsa29I	ATCGAT	1 cut(s)	792
BsaAI	YACGTR	1 cut(s)	1590
BsaI	GGTCTC	2 cut(s)	70, 937
BsaJI	CCNNGG	1 cut(s)	2145
BsaWI	WCCGGW	1 cut(s)	946
BsaXI	ACNNNNNCTCC	2 cut(s)	615, 645
Bsc4I	CCNNNNNNNGG	1 cut(s)	115
Bse1I	ACTGG	2 cut(s)	59, 910
Bse3DI	GCAATG	2 cut(s)	399, 1560
BseBI	CCWGG	2 cut(s)	1946, 2147
BseCI	ATCGAT	1 cut(s)	792
BseDI	CCNNGG	1 cut(s)	2145
BseGI	GGATG	3 cut(s)	436, 1345, 1375
BseLI	CCNNNNNNNGG	1 cut(s)	115
BseMI	GCAATG	2 cut(s)	399, 1560
BseMII	CTCAG	3 cut(s)	86, 816, 2052
BseNI	ACTGG	2 cut(s)	59, 910
BseSI	GKGCMC	2 cut(s)	8, 418
BseXI	GCAGC	5 cut(s)	518, 631, 735, 1346, 2175
BsgI	GTGCAG	1 cut(s)	158
BshFI	GGCC	2 cut(s)	16, 416
BshNI	GGYRCC	1 cut(s)	5
BshVI	ATCGAT	1 cut(s)	792
BsiSI	CCGG	1 cut(s)	947
BslFI	GGGAC	3 cut(s)	1743, 1772, 1874
BslI	CCNNNNNNNGG	1 cut(s)	115
BsmAI	GTCTC	3 cut(s)	70, 478, 937
BsmFI	GGGAC	3 cut(s)	1743, 1772, 1874
BsmI	GAATGC	2 cut(s)	1701, 2165
BsnI	GGCC	2 cut(s)	16, 416
Bso31I	GGTCTC	2 cut(s)	70, 937
Bsp120I	GGGCCC	1 cut(s)	414
Bsp1286I	GDGCHC	2 cut(s)	8, 418
Bsp1407I	TGTACA	1 cut(s)	839
Bsp143I	GATC	3 cut(s)	1213, 1272, 2108
BspACI	CCGC	4 cut(s)	109, 1336, 1828, 2170
BspANI	GGCC	2 cut(s)	16, 416
BspCNI	CTCAG	3 cut(s)	85, 817, 2053
BspDI	ATCGAT	1 cut(s)	792
BspLI	GGNNCC	4 cut(s)	7, 416, 1260, 1760
BspMAI	CTGCAG	2 cut(s)	1252, 2193
BspPI	GGATC	1 cut(s)	2103
BspT107I	GGYRCC	1 cut(s)	5
BspTI	CTTAAG	1 cut(s)	1537
BspTNI	GGTCTC	2 cut(s)	70, 937
BsrBI	CCGCTC	1 cut(s)	1830
BsrDI	GCAATG	2 cut(s)	399, 1560
BsrGI	TGTACA	1 cut(s)	839
BsrI	ACTGG	2 cut(s)	59, 910
BssECI	CCNNGG	1 cut(s)	2145
BssMI	GATC	3 cut(s)	1213, 1272, 2108
BssSI	CACGAG	1 cut(s)	134
Bst2BI	CACGAG	1 cut(s)	134
Bst2UI	CCWGG	2 cut(s)	1946, 2147
Bst4CI	ACNGT	2 cut(s)	381, 1810
Bst6I	CTCTTC	2 cut(s)	458, 1445
BstAFI	CTTAAG	1 cut(s)	1537
BstAUI	TGTACA	1 cut(s)	839
BstBAI	YACGTR	1 cut(s)	1590
BstC8I	GCNNGC	3 cut(s)	570, 1252, 1422
BstDEI	CTNAG	8 cut(s)	72, 449, 611, 825, 933, 1641, 1861, 2061
BstF5I	GGATG	3 cut(s)	436, 1345, 1375
BstH2I	RGCGCY	1 cut(s)	1748
BstHHI	GCGC	1 cut(s)	1747
BstKTI	GATC	3 cut(s)	1216, 1275, 2111
BstMAI	GTCTC	3 cut(s)	70, 478, 937
BstMBI	GATC	3 cut(s)	1213, 1272, 2108
BstMWI	GCNNNNNNNGC	8 cut(s)	22, 145, 422, 431, 522, 531, 605, 1827
BstNI	CCWGG	2 cut(s)	1946, 2147
BstNSI	RCATGY	1 cut(s)	2141
BstSCI	CCNGG	2 cut(s)	1944, 2145
BstSFI	CTRYAG	6 cut(s)	511, 1248, 1720, 1822, 2035, 2189
BstSLI	GKGCMC	2 cut(s)	8, 418
BstV1I	GCAGC	5 cut(s)	518, 631, 735, 1346, 2175
BstV2I	GAAGAC	1 cut(s)	647
BstX2I	RGATCY	1 cut(s)	2108
BstYI	RGATCY	1 cut(s)	2108
Bsu15I	ATCGAT	1 cut(s)	792
BsuRI	GGCC	2 cut(s)	16, 416
BsuTUI	ATCGAT	1 cut(s)	792
BtsCI	GGATG	3 cut(s)	436, 1345, 1375
BtsI	GCAGTG	1 cut(s)	1073
BtsIMutI	CAGTG	2 cut(s)	66, 1073
Cac8I	GCNNGC	3 cut(s)	570, 1252, 1422
CaiI	CAGNNNCTG	1 cut(s)	1115
CfoI	GCGC	1 cut(s)	1747
Cfr13I	GGNCC	3 cut(s)	414, 415, 1759
ClaI	ATCGAT	1 cut(s)	792
Csp6I	GTAC	4 cut(s)	150, 840, 1591, 2204
CviQI	GTAC	4 cut(s)	150, 840, 1591, 2204
DdeI	CTNAG	8 cut(s)	72, 449, 611, 825, 933, 1641, 1861, 2061
DpnI	GATC	3 cut(s)	1215, 1274, 2110
DpnII	GATC	3 cut(s)	1213, 1272, 2108
DraI	TTTAAA	1 cut(s)	1395
DraIII	CACNNNGTG	1 cut(s)	61
Eam1104I	CTCTTC	2 cut(s)	458, 1445
EarI	CTCTTC	2 cut(s)	458, 1445
Eco24I	GRGCYC	1 cut(s)	418
Eco31I	GGTCTC	2 cut(s)	70, 937
Eco47I	GGWCC	1 cut(s)	1759
Eco57I	CTGAAG	2 cut(s)	1137, 1156
EcoO109I	RGGNCCY	1 cut(s)	414
EcoRI	GAATTC	1 cut(s)	2216
EcoRII	CCWGG	2 cut(s)	1944, 2145
EcoT38I	GRGCYC	1 cut(s)	418
FaqI	GGGAC	3 cut(s)	1743, 1772, 1874
FauI	CCCGC	1 cut(s)	1329
FauNDI	CATATG	2 cut(s)	1696, 1852
FbaI	TGATCA	1 cut(s)	1213
FblI	GTMKAC	2 cut(s)	2038, 2047
Fnu4HI	GCNGC	6 cut(s)	532, 645, 724, 1360, 1828, 2189
FokI	GGATG	3 cut(s)	443, 1352, 1382
FriOI	GRGCYC	1 cut(s)	418
Fsp4HI	GCNGC	6 cut(s)	532, 645, 724, 1360, 1828, 2189
FspBI	CTAG	5 cut(s)	528, 573, 1668, 1793, 2221
GlaI	GCGC	1 cut(s)	1746
GluI	GCNGC	6 cut(s)	532, 645, 724, 1360, 1828, 2189
HaeII	RGCGCY	1 cut(s)	1748
HaeIII	GGCC	2 cut(s)	16, 416
HapII	CCGG	1 cut(s)	947
HhaI	GCGC	1 cut(s)	1747
Hin6I	GCGC	1 cut(s)	1745
HinP1I	GCGC	1 cut(s)	1745
HincII	GTYRAC	1 cut(s)	337
HindII	GTYRAC	1 cut(s)	337
HindIII	AAGCTT	3 cut(s)	206, 438, 903
HinfI	GANTC	5 cut(s)	188, 397, 494, 1611, 1716
HpaII	CCGG	1 cut(s)	947
HphI	GGTGA	2 cut(s)	1637, 1847
Hpy166II	GTNNAC	3 cut(s)	337, 2039, 2048
Hpy188I	TCNGA	9 cut(s)	75, 187, 327, 360, 430, 817, 1111, 1321, 1917
Hpy8I	GTNNAC	3 cut(s)	337, 2039, 2048
HpyAV	CCTTC	9 cut(s)	55, 414, 581, 667, 823, 881, 1112, 1390, 1769
HpyCH4III	ACNGT	2 cut(s)	381, 1810
HpyCH4IV	ACGT	3 cut(s)	560, 1589, 2120
HpyF10VI	GCNNNNNNNGC	8 cut(s)	22, 145, 422, 431, 522, 531, 605, 1827
HpyF3I	CTNAG	8 cut(s)	72, 449, 611, 825, 933, 1641, 1861, 2061
HpySE526I	ACGT	3 cut(s)	560, 1589, 2120
HspAI	GCGC	1 cut(s)	1745
Ksp22I	TGATCA	1 cut(s)	1213
Kzo9I	GATC	3 cut(s)	1213, 1272, 2108
LmnI	GCTCC	2 cut(s)	949, 1645
Lsp1109I	GCAGC	5 cut(s)	518, 631, 735, 1346, 2175
LweI	GCATC	4 cut(s)	325, 421, 1407, 1417
MaeI	CTAG	5 cut(s)	528, 573, 1668, 1793, 2221
MaeII	ACGT	3 cut(s)	560, 1589, 2120
MalI	GATC	3 cut(s)	1215, 1274, 2110
MbiI	CCGCTC	1 cut(s)	1830
MboI	GATC	3 cut(s)	1213, 1272, 2108
MboII	GAAGA	9 cut(s)	84, 475, 647, 911, 1426, 1432, 1683, 1784, 1949
MflI	RGATCY	1 cut(s)	2108
MhlI	GDGCHC	2 cut(s)	8, 418
MlyI	GAGTC	1 cut(s)	503
MmeI	TCCRAC	1 cut(s)	96
MroXI	GAANNNNTTC	1 cut(s)	424
MslI	CAYNNNNRTG	1 cut(s)	1793
MspA1I	CMGCKG	1 cut(s)	111
MspCI	CTTAAG	1 cut(s)	1537
MspI	CCGG	1 cut(s)	947
MspR9I	CCNGG	2 cut(s)	1946, 2147
Mva1269I	GAATGC	2 cut(s)	1701, 2165
MvaI	CCWGG	2 cut(s)	1946, 2147
MwoI	GCNNNNNNNGC	8 cut(s)	22, 145, 422, 431, 522, 531, 605, 1827
NdeI	CATATG	2 cut(s)	1696, 1852
NdeII	GATC	3 cut(s)	1213, 1272, 2108
NlaIV	GGNNCC	4 cut(s)	7, 416, 1260, 1760
NmuCI	GTSAC	8 cut(s)	375, 850, 1585, 1625, 1655, 1795, 1835, 2140
NspI	RCATGY	1 cut(s)	2141
OliI	CACNNNNGTG	1 cut(s)	1793
PciI	ACATGT	1 cut(s)	2137
PctI	GAATGC	2 cut(s)	1701, 2165
PdmI	GAANNNNTTC	1 cut(s)	424
PfeI	GAWTC	4 cut(s)	188, 397, 1611, 1716
PflFI	GACNNNGTC	1 cut(s)	1404
PkrI	GCNGC	6 cut(s)	533, 646, 725, 1361, 1829, 2190
PleI	GAGTC	1 cut(s)	502
PpsI	GAGTC	1 cut(s)	502
Ppu21I	YACGTR	1 cut(s)	1590
PscI	ACATGT	1 cut(s)	2137
PshBI	ATTAAT	2 cut(s)	1920, 2126
Psp6I	CCWGG	2 cut(s)	1944, 2145
PspGI	CCWGG	2 cut(s)	1944, 2145
PspN4I	GGNNCC	4 cut(s)	7, 416, 1260, 1760
PspOMI	GGGCCC	1 cut(s)	414
PspPI	GGNCC	3 cut(s)	414, 415, 1759
PstI	CTGCAG	2 cut(s)	1252, 2193
PstNI	CAGNNNCTG	1 cut(s)	1115
PsuI	RGATCY	1 cut(s)	2108
PsyI	GACNNNGTC	1 cut(s)	1404
RsaI	GTAC	4 cut(s)	151, 841, 1592, 2205
RsaNI	GTAC	4 cut(s)	150, 840, 1591, 2204
RseI	CAYNNNNRTG	1 cut(s)	1793
SatI	GCNGC	6 cut(s)	532, 645, 724, 1360, 1828, 2189
Sau3AI	GATC	3 cut(s)	1213, 1272, 2108
Sau96I	GGNCC	3 cut(s)	414, 415, 1759
SchI	GAGTC	1 cut(s)	503
ScrFI	CCNGG	2 cut(s)	1946, 2147
SduI	GDGCHC	2 cut(s)	8, 418
SfaNI	GCATC	4 cut(s)	325, 421, 1407, 1417
SfcI	CTRYAG	6 cut(s)	511, 1248, 1720, 1822, 2035, 2189
SinI	GGWCC	1 cut(s)	1759
SmiMI	CAYNNNNRTG	1 cut(s)	1793
SmlI	CTYRAG	3 cut(s)	435, 1349, 1537
SmoI	CTYRAG	3 cut(s)	435, 1349, 1537
SsiI	CCGC	4 cut(s)	109, 1336, 1828, 2170
SspI	AATATT	2 cut(s)	1105, 1677
SspMI	CTAG	5 cut(s)	528, 573, 1668, 1793, 2221
StyD4I	CCNGG	2 cut(s)	1944, 2145
TaaI	ACNGT	2 cut(s)	381, 1810
TaiI	ACGT	3 cut(s)	563, 1592, 2123
TaqI	TCGA	5 cut(s)	506, 594, 635, 792, 1548
TatI	WGTACW	1 cut(s)	839
TauI	GCSGC	1 cut(s)	1830
TfiI	GAWTC	4 cut(s)	188, 397, 1611, 1716
TscAI	CASTG	2 cut(s)	66, 1080
TseFI	GTSAC	8 cut(s)	375, 850, 1585, 1625, 1655, 1795, 1835, 2140
TseI	GCWGC	5 cut(s)	531, 644, 723, 1359, 2188
Tsp45I	GTSAC	8 cut(s)	375, 850, 1585, 1625, 1655, 1795, 1835, 2140
TspDTI	ATGAA	7 cut(s)	799, 1256, 1356, 1490, 1683, 2070, 2196
TspGWI	ACGGA	1 cut(s)	1308
TspRI	CASTG	2 cut(s)	66, 1080
Tth111I	GACNNNGTC	1 cut(s)	1404
Vha464I	CTTAAG	1 cut(s)	1537
VpaK11BI	GGWCC	1 cut(s)	1759
VspI	ATTAAT	2 cut(s)	1920, 2126
XapI	RAATTY	4 cut(s)	329, 361, 1122, 2216
XbaI	TCTAGA	1 cut(s)	1667
XceI	RCATGY	1 cut(s)	2141
XcmI	CCANNNNNNNNNTGG	1 cut(s)	108
XmiI	GTMKAC	2 cut(s)	2038, 2047
XmnI	GAANNNNTTC	1 cut(s)	424
XspI	CTAG	5 cut(s)	528, 573, 1668, 1793, 2221

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.