Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0012660

Physical Location & Seq

Genomic Coordinates Forward (+)

13723479 .. 13727512

Gene Structure 4034 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1114400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGCATGTAGACTGTGGGGAGCACAGAGATCTCTCTCTTAGCACAAGAAAATACAGAAACTCCATCACCATGGATTACTCTTACACACAGACCCACCAAGAAGACCATCAACAACACCAGAAGCAGCAATCATTCGATCCCTCAAGAATCCAATCCTACGACCAATCCTACCAGGCCTATTATCCCTACAATCACCCCCAACAATCCGACCACCAACAACAATACCAACACTACTACAATCCCACCACCACCACCCAGGATTACGCCACCTCCCACGACGCCACCGCCCACCACCACCAATACCATCAAGAACCCATTTCGATTCATCCTCCCGGGGTCCCAATTCCGCCCCAACAGCCACAAACGGCGGATCCTGACCCGACCCATTTGCAGAATGCGTATTACCCACATGGGGTTGCGGAGGATCAGAAGCAGCAGGTGGATTCGAGCTCGGGCTATGGTGGGTTGAATCCAGCGGCCGTGGCAGCGCTTTCGCAGCTCTCGCAGCTTACTGGGAACATCGAGGCGGCCCAGCGGGCTGCTCAACCCCCGATTGGGCAAACTATATATAGAGGTGGAGGTAGGAGGGGCAATAGGCCCTTCCGGGGGGGTGGTCGGGGCCATTTTGTTTACCGTGGTTCTAGACCAGATGGCTCAGCACCCCCATTCCGTGGTAGGGGACGTGGCCAGGGTGGTGGTAGGCACTTTCAACAGTATGGTGCTGCATCAACCAATCCAAATTCAATACCTGTTCCTGCTGAAGGTGTAGCTGCTTTAACGCAGCCGCCTTCAGCGTTGGTTCCTGGGCAGGCACCATTACCTGTACCAACACAAGTGTCTTCTGCTTCATTCTGGCGACCTCCTCGTATGGTTTGGTGTGAACTTTGTAGGGTTGACTGCAACACTCCTGAAATCCTTGAGCAGCATAAAAATGGAAAGCGACACAAAAAAAATATGCTGGTACATGAGGAGTTGCAGAAACGCAACAAAGTCAATACTGGACAACAGAATGCTCAAATGCCTAACACTGAATTAAAAACAGAAGTCCCTGTGAGAGTTGAGGGATTTGAGGAAAAACAACCCTTACAAGAAAATATAACATCTGGAGTAGTTACTGATGATAGTAGAAATGAAACAGATCAGAAAGATACCGGCACAAATGCTGAAGCTTCCACAGAACCTGGGAACAACTCCAGCGATCAGTTTGCAGGCCGAGGACGAGGTTCTAAGCATAGGATGCGAGGGGGTCGAGGGGGTCGAGGGGGTAAGTATGTGAGGACTAATGACGGATCCAGAAGACCAGTTGAGCCTCCCAAACCAAAACAAGTTCCTTTTATATGTGAATTGTGCAATGTCAAGTGTGAGTCACAGGTGGTTTATGATAGTCATGTGAACGGTAAAAAGCATATAGCCACCCTCAAGCGGTTTCATGGTCACCGTGCTTTGTACGGAGATGCGGGGCTTCAAGCACTTAACCCACCCAATGTAAATGCTGCATCAACTTCAGCTGCCCCCCCTGTCCATCAAGTTGTCAATGATCCTCAGGCCCTCCTGGCACAACTGTTGATGAATTATGTGCTCTCTCAAACCCAAGCACAAGGGATAGCACCAGCTCCAGGAGCAGCACCAGCTGCGTCACCAGCTCAAGGAACAAGCACGGGAACCCAGAATCAACTGGATTCACTGATTCAAGGAGCACAAGCGATGTGTCAAGATGGAAGCCAAAACGTGGTTATAGAGCAAATCAAGAGTCTGCTGCAATCTGTCCAGGCATACTCTGCAACCCCAGCGGCCGGGACTGCAGTCGTGAACACTGGGAATGAAACTTCAGAGTTTGAAGCGAAGAAGGCAAGTGGTCTTATAAACACTACAGCTGCGGCACCAACAAATCCAGGCACAAGCGAGCAAGTTTCTGGAACACCATCGAGCAAGGAATGCGAAGTTGCCGCCTCCTCAGATTCATTTGTTCAGCCACAACCCGAAGGCCAAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-met

Protein Analysis

665

Amino Acids

71.92

Weight (kDa)

7.71

Isoelectric Point (pI)

51.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	292 - 315	8.7e-06	Zinc-finger of C2H2 type
zf-met	PF12874	445 - 469	2.2e-08	Zinc-finger of C2H2 type
zf-C2H2_jaz	PF12171	445 - 469	2.7e-06	Zinc-finger double-stranded RNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012660)

Species	Orthologous Gene IDs
malus_domestica	MD02G1210900.v1.1 MD07G1114400.v1.1
prunus_persica	Prupe.2G137000_v2.0.a1
pyrus_communis	pycom02g17390 pycom07g09930 pycom07g09940
rosa_chinensis	RchiOBHm_Chr1g0349021
rosa_laevigata	RLG00000028611
rosa_multiflora	Rmu_sc0009855.1_g000008 Rmu_sc0015786.1_g000001 Rmu_sc0038026.1_g000001
rosa_roxburghii	Rroxscaffold_4G00306230
rosa_rugosa	Rorug01G0199500
rosa_samantha	Rh1AG217100 Rh1BG182600 Rh1CG201500 Rh1DG212600
rosa_wichuraiana	Rw0G005390 Rw1G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1862
AarI	CACCTGC	1 cut(s)	427
Acc36I	ACCTGC	1 cut(s)	427
AccB1I	GGYRCC	2 cut(s)	811, 1879
AccB7I	CCANNNNNTGG	2 cut(s)	671, 1729
AccI	GTMKAC	1 cut(s)	9
AclWI	GGATC	7 cut(s)	131, 365, 378, 432, 1284, 1297, 1532
AcoI	YGGCCR	3 cut(s)	477, 685, 1791
AcsI	RAATTY	1 cut(s)	739
AcuI	CTGAAG	5 cut(s)	774, 780, 1185, 1488, 1812
AcyI	GRCGYC	1 cut(s)	279
AfaI	GTAC	3 cut(s)	825, 963, 1448
AfeI	AGCGCT	1 cut(s)	489
AgsI	TTSAA	6 cut(s)	469, 710, 744, 1466, 1691, 1838
AjiI	CACGTC	1 cut(s)	683
AjnI	CCWGG	9 cut(s)	171, 255, 687, 802, 1180, 1551, 1615, 1767, 1891
Alw21I	GWGCWC	4 cut(s)	24, 452, 1581, 1699
AlwI	GGATC	7 cut(s)	131, 365, 378, 432, 1284, 1297, 1532
AlwNI	CAGNNNCTG	1 cut(s)	1181
Ama87I	CYCGRG	2 cut(s)	332, 451
Aor51HI	AGCGCT	1 cut(s)	489
ApoI	RAATTY	1 cut(s)	739
ArsI	GACNNNNNNTTYG	2 cut(s)	1735, 1767
AspLEI	GCGC	1 cut(s)	490
AspS9I	GGNCC	5 cut(s)	337, 529, 597, 619, 1546
AsuC2I	CCSGG	4 cut(s)	333, 334, 605, 1795
AsuHPI	GGTGA	4 cut(s)	58, 185, 1427, 1629
AvaI	CYCGRG	2 cut(s)	332, 451
AvaII	GGWCC	1 cut(s)	337
AxyI	CCTNAGG	1 cut(s)	1542
BalI	TGGCCA	1 cut(s)	687
BamHI	GGATCC	2 cut(s)	370, 1289
BanI	GGYRCC	2 cut(s)	811, 1879
BanII	GRGCYC	1 cut(s)	452
BbsI	GAAGAC	3 cut(s)	108, 831, 1303
Bbv12I	GWGCWC	4 cut(s)	24, 452, 1581, 1699
BccI	CCATC	7 cut(s)	71, 114, 312, 644, 1530, 1709, 1930
BceAI	ACGGC	2 cut(s)	381, 464
BcgI	CGANNNNNNTGC	6 cut(s)	370, 404, 474, 508, 1187, 1221
BciT130I	CCWGG	9 cut(s)	173, 257, 689, 804, 1182, 1553, 1617, 1769, 1893
BcnI	CCSGG	4 cut(s)	333, 334, 605, 1795
BfaI	CTAG	1 cut(s)	642
BfmI	CTRYAG	2 cut(s)	1800, 1869
BfoI	RGCGCY	1 cut(s)	491
BfuAI	ACCTGC	1 cut(s)	427
BglI	GCCNNNNNGGC	2 cut(s)	536, 1553
BglII	AGATCT	1 cut(s)	28
BlpI	GCTNAGC	1 cut(s)	655
Bme18I	GGWCC	1 cut(s)	337
BmeT110I	CYCGRG	2 cut(s)	332, 451
BmgBI	CACGTC	1 cut(s)	683
BmgT120I	GGNCC	5 cut(s)	337, 529, 597, 619, 1546
BmiI	GGNNCC	9 cut(s)	338, 339, 372, 620, 801, 813, 1291, 1663, 1881
BmrI	ACTGGG	2 cut(s)	522, 1824
BmsI	GCATC	4 cut(s)	734, 1227, 1444, 1505
BmuI	ACTGGG	2 cut(s)	522, 1824
BoxI	GACNNNNGTC	1 cut(s)	1802
BpiI	GAAGAC	3 cut(s)	108, 831, 1303
BpmI	CTGGAG	3 cut(s)	1125, 1177, 1599
Bpu1102I	GCTNAGC	1 cut(s)	655
BpuEI	CTTGAG	4 cut(s)	127, 938, 1403, 1629
BpuMI	CCSGG	4 cut(s)	333, 334, 605, 1795
BsaHI	GRCGYC	1 cut(s)	279
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 254, 284
Bse118I	RCCGGY	1 cut(s)	1151
Bse1I	ACTGG	5 cut(s)	517, 1003, 1301, 1680, 1819
Bse21I	CCTNAGG	1 cut(s)	1542
Bse3DI	GCAATG	1 cut(s)	1357
BseBI	CCWGG	9 cut(s)	173, 257, 689, 804, 1182, 1553, 1617, 1769, 1893
BseGI	GGATG	2 cut(s)	325, 1242
BseMI	GCAATG	1 cut(s)	1357
BseMII	CTCAG	3 cut(s)	669, 1556, 1968
BseNI	ACTGG	5 cut(s)	517, 1003, 1301, 1680, 1819
BseRI	GAGGAG	3 cut(s)	852, 983, 1942
BseX3I	CGGCCG	2 cut(s)	477, 1791
BseYI	CCCAGC	2 cut(s)	531, 1786
Bsh1285I	CGRYCG	2 cut(s)	480, 1794
BshNI	GGYRCC	2 cut(s)	811, 1879
BsiEI	CGRYCG	2 cut(s)	480, 1794
BsiHKAI	GWGCWC	4 cut(s)	24, 452, 1581, 1699
BsiHKCI	CYCGRG	2 cut(s)	332, 451
BsiSI	CCGG	4 cut(s)	333, 604, 1152, 1794
BslFI	GGGAC	4 cut(s)	323, 693, 1031, 1810
BsmFI	GGGAC	4 cut(s)	323, 693, 1031, 1810
BsmI	GAATGC	3 cut(s)	400, 1015, 1940
BsoBI	CYCGRG	2 cut(s)	332, 451
Bsp1286I	GDGCHC	4 cut(s)	24, 452, 1581, 1699
Bsp143I	GATC	8 cut(s)	28, 136, 370, 424, 1138, 1198, 1289, 1537
Bsp1720I	GCTNAGC	1 cut(s)	655
Bsp19I	CCATGG	1 cut(s)	69
BspCNI	CTCAG	3 cut(s)	668, 1555, 1967
BspLI	GGNNCC	9 cut(s)	338, 339, 372, 620, 801, 813, 1291, 1663, 1881
BspMAI	CTGCAG	1 cut(s)	1804
BspMI	ACCTGC	1 cut(s)	427
BspPI	GGATC	7 cut(s)	131, 365, 378, 432, 1284, 1297, 1532
BspT107I	GGYRCC	2 cut(s)	811, 1879
BsrDI	GCAATG	1 cut(s)	1357
BsrFI	RCCGGY	1 cut(s)	1151
BsrI	ACTGG	5 cut(s)	517, 1003, 1301, 1680, 1819
BssAI	RCCGGY	1 cut(s)	1151
BssMI	GATC	8 cut(s)	28, 136, 370, 424, 1138, 1198, 1289, 1537
BssNI	GRCGYC	1 cut(s)	279
BssT1I	CCWWGG	1 cut(s)	69
Bst2UI	CCWGG	9 cut(s)	173, 257, 689, 804, 1182, 1553, 1617, 1769, 1893
Bst4CI	ACNGT	6 cut(s)	14, 635, 714, 1397, 1439, 1563
BstACI	GRCGYC	1 cut(s)	279
BstAPI	GCANNNNNTGC	4 cut(s)	1237, 1631, 1778, 1935
BstC8I	GCNNGC	4 cut(s)	537, 810, 1210, 1904
BstDEI	CTNAG	5 cut(s)	38, 655, 1227, 1542, 1954
BstDSI	CCRYGG	4 cut(s)	69, 480, 634, 670
BstEII	GGTNACC	1 cut(s)	1433
BstENI	CCTNNNNNAGG	1 cut(s)	759
BstF5I	GGATG	2 cut(s)	325, 1242
BstH2I	RGCGCY	1 cut(s)	491
BstHHI	GCGC	1 cut(s)	490
BstKTI	GATC	8 cut(s)	31, 139, 373, 427, 1141, 1201, 1292, 1540
BstMBI	GATC	8 cut(s)	28, 136, 370, 424, 1138, 1198, 1289, 1537
BstMCI	CGRYCG	2 cut(s)	480, 1794
BstNI	CCWGG	9 cut(s)	173, 257, 689, 804, 1182, 1553, 1617, 1769, 1893
BstNSI	RCATGY	1 cut(s)	8
BstPAI	GACNNNNGTC	1 cut(s)	1802
BstPI	GGTNACC	1 cut(s)	1433
BstSFI	CTRYAG	2 cut(s)	1800, 1869
BstV2I	GAAGAC	3 cut(s)	108, 831, 1303
BstX2I	RGATCY	3 cut(s)	28, 370, 1289
BstXI	CCANNNNNNTGG	2 cut(s)	70, 695
BstYI	RGATCY	3 cut(s)	28, 370, 1289
BstZI	CGGCCG	2 cut(s)	477, 1791
Bsu36I	CCTNAGG	1 cut(s)	1542
BtgI	CCRYGG	4 cut(s)	69, 480, 634, 670
BtgZI	GCGATG	1 cut(s)	1718
BtrI	CACGTC	1 cut(s)	683
BtsCI	GGATG	2 cut(s)	325, 1242
BtsIMutI	CAGTG	3 cut(s)	1026, 1682, 1812
BveI	ACCTGC	1 cut(s)	427
Cac8I	GCNNGC	4 cut(s)	537, 810, 1210, 1904
CaiI	CAGNNNCTG	1 cut(s)	1181
CfoI	GCGC	1 cut(s)	490
Cfr10I	RCCGGY	1 cut(s)	1151
Cfr13I	GGNCC	5 cut(s)	337, 529, 597, 619, 1546
Cfr9I	CCCGGG	1 cut(s)	332
CseI	GACGC	2 cut(s)	287, 1623
Csp6I	GTAC	3 cut(s)	824, 962, 1447
CviAII	CATG	6 cut(s)	5, 70, 410, 965, 1388, 1430
CviQI	GTAC	3 cut(s)	824, 962, 1447
DdeI	CTNAG	5 cut(s)	38, 655, 1227, 1542, 1954
DpnI	GATC	8 cut(s)	30, 138, 372, 426, 1140, 1200, 1291, 1539
DpnII	GATC	8 cut(s)	28, 136, 370, 424, 1138, 1198, 1289, 1537
EaeI	YGGCCR	3 cut(s)	477, 685, 1791
EagI	CGGCCG	2 cut(s)	477, 1791
EciI	GGCGGA	2 cut(s)	336, 383
Ecl136II	GAGCTC	1 cut(s)	450
EclXI	CGGCCG	2 cut(s)	477, 1791
Eco130I	CCWWGG	1 cut(s)	69
Eco147I	AGGCCT	1 cut(s)	176
Eco24I	GRGCYC	1 cut(s)	452
Eco47I	GGWCC	1 cut(s)	337
Eco47III	AGCGCT	1 cut(s)	489
Eco52I	CGGCCG	2 cut(s)	477, 1791
Eco53kI	GAGCTC	1 cut(s)	450
Eco57I	CTGAAG	5 cut(s)	774, 780, 1185, 1488, 1812
Eco81I	CCTNAGG	1 cut(s)	1542
Eco88I	CYCGRG	2 cut(s)	332, 451
Eco91I	GGTNACC	1 cut(s)	1433
EcoICRI	GAGCTC	1 cut(s)	450
EcoNI	CCTNNNNNAGG	1 cut(s)	759
EcoO109I	RGGNCCY	3 cut(s)	337, 597, 1546
EcoO65I	GGTNACC	1 cut(s)	1433
EcoRII	CCWGG	9 cut(s)	171, 255, 687, 802, 1180, 1551, 1615, 1767, 1891
EcoT14I	CCWWGG	1 cut(s)	69
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	452
ErhI	CCWWGG	1 cut(s)	69
FaeI	CATG	6 cut(s)	8, 73, 413, 968, 1391, 1433
FaqI	GGGAC	4 cut(s)	323, 693, 1031, 1810
FatI	CATG	6 cut(s)	4, 69, 409, 964, 1387, 1429
FauI	CCCGC	2 cut(s)	528, 1450
FblI	GTMKAC	1 cut(s)	9
FokI	GGATG	2 cut(s)	312, 1249
FriOI	GRGCYC	1 cut(s)	452
FspBI	CTAG	1 cut(s)	642
GlaI	GCGC	1 cut(s)	489
GsaI	CCCAGC	2 cut(s)	535, 1790
GsuI	CTGGAG	3 cut(s)	1125, 1177, 1599
HaeII	RGCGCY	1 cut(s)	491
HapII	CCGG	4 cut(s)	333, 604, 1152, 1794
HgaI	GACGC	2 cut(s)	287, 1623
HhaI	GCGC	1 cut(s)	490
Hin1I	GRCGYC	1 cut(s)	279
Hin1II	CATG	6 cut(s)	8, 73, 413, 968, 1391, 1433
Hin6I	GCGC	1 cut(s)	488
HinP1I	GCGC	1 cut(s)	488
HincII	GTYRAC	1 cut(s)	895
HindII	GTYRAC	1 cut(s)	895
HindIII	AAGCTT	1 cut(s)	1167
HpaII	CCGG	4 cut(s)	333, 604, 1152, 1794
HphI	GGTGA	4 cut(s)	58, 185, 1427, 1629
Hpy166II	GTNNAC	6 cut(s)	10, 631, 881, 895, 1393, 1810
Hpy188I	TCNGA	5 cut(s)	208, 429, 1143, 1831, 1957
Hpy8I	GTNNAC	6 cut(s)	10, 631, 881, 895, 1393, 1810
Hpy99I	CGWCG	1 cut(s)	281
HpyAV	CCTTC	5 cut(s)	610, 755, 798, 1840, 1976
HpyCH4III	ACNGT	6 cut(s)	14, 635, 714, 1397, 1439, 1563
HpyCH4IV	ACGT	2 cut(s)	682, 1728
HpyF3I	CTNAG	5 cut(s)	38, 655, 1227, 1542, 1954
HpySE526I	ACGT	2 cut(s)	682, 1728
Hsp92I	GRCGYC	1 cut(s)	279
Hsp92II	CATG	6 cut(s)	8, 73, 413, 968, 1391, 1433
HspAI	GCGC	1 cut(s)	488
KflI	GGGWCCC	1 cut(s)	337
Kzo9I	GATC	8 cut(s)	28, 136, 370, 424, 1138, 1198, 1289, 1537
LmnI	GCTCC	4 cut(s)	19, 1618, 1619, 1694
LweI	GCATC	4 cut(s)	734, 1227, 1444, 1505
MaeI	CTAG	1 cut(s)	642
MaeII	ACGT	2 cut(s)	682, 1728
MaeIII	GTNAC	4 cut(s)	1111, 1365, 1433, 1635
MalI	GATC	8 cut(s)	30, 138, 372, 426, 1140, 1200, 1291, 1539
MboI	GATC	8 cut(s)	28, 136, 370, 424, 1138, 1198, 1289, 1537
MboII	GAAGA	4 cut(s)	113, 831, 1308, 1855
MflI	RGATCY	3 cut(s)	28, 370, 1289
MhlI	GDGCHC	4 cut(s)	24, 452, 1581, 1699
MlsI	TGGCCA	1 cut(s)	687
MluCI	AATT	5 cut(s)	342, 739, 1031, 1343, 1570
MluNI	TGGCCA	1 cut(s)	687
MlyI	GAGTC	2 cut(s)	1373, 1759
MmeI	TCCRAC	1 cut(s)	231
Mox20I	TGGCCA	1 cut(s)	687
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	687
MseI	TTAA	3 cut(s)	776, 1034, 1473
MslI	CAYNNNNRTG	2 cut(s)	68, 930
Msp20I	TGGCCA	1 cut(s)	687
MspA1I	CMGCKG	6 cut(s)	476, 535, 1508, 1631, 1790, 1874
MspI	CCGG	4 cut(s)	333, 604, 1152, 1794
Mva1269I	GAATGC	3 cut(s)	400, 1015, 1940
MvaI	CCWGG	9 cut(s)	173, 257, 689, 804, 1182, 1553, 1617, 1769, 1893
NciI	CCSGG	4 cut(s)	333, 334, 605, 1795
NcoI	CCATGG	1 cut(s)	69
NdeII	GATC	8 cut(s)	28, 136, 370, 424, 1138, 1198, 1289, 1537
NlaIII	CATG	6 cut(s)	8, 73, 413, 968, 1391, 1433
NlaIV	GGNNCC	9 cut(s)	338, 339, 372, 620, 801, 813, 1291, 1663, 1881
NmeAIII	GCCGAG	1 cut(s)	1238
NmuCI	GTSAC	3 cut(s)	1365, 1433, 1635
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	8
PaqCI	CACCTGC	1 cut(s)	427
PceI	AGGCCT	1 cut(s)	176
PcsI	WCGNNNNNNNCGW	1 cut(s)	1255
PctI	GAATGC	3 cut(s)	400, 1015, 1940
PfeI	GAWTC	8 cut(s)	147, 322, 443, 469, 1669, 1679, 1687, 1958
PflMI	CCANNNNNTGG	2 cut(s)	671, 1729
PfoI	TCCNGGA	1 cut(s)	1615
PleI	GAGTC	2 cut(s)	1372, 1758
PpsI	GAGTC	2 cut(s)	1372, 1758
PpuMI	RGGWCCY	1 cut(s)	337
PshAI	GACNNNNGTC	1 cut(s)	1802
PsiI	TTATAA	1 cut(s)	1862
Psp124BI	GAGCTC	1 cut(s)	452
Psp5II	RGGWCCY	1 cut(s)	337
Psp6I	CCWGG	9 cut(s)	171, 255, 687, 802, 1180, 1551, 1615, 1767, 1891
PspEI	GGTNACC	1 cut(s)	1433
PspFI	CCCAGC	2 cut(s)	531, 1786
PspGI	CCWGG	9 cut(s)	171, 255, 687, 802, 1180, 1551, 1615, 1767, 1891
PspN4I	GGNNCC	9 cut(s)	338, 339, 372, 620, 801, 813, 1291, 1663, 1881
PspPI	GGNCC	5 cut(s)	337, 529, 597, 619, 1546
PspPPI	RGGWCCY	1 cut(s)	337
PstI	CTGCAG	1 cut(s)	1804
PstNI	CAGNNNCTG	1 cut(s)	1181
PsuI	RGATCY	3 cut(s)	28, 370, 1289
PvuII	CAGCTG	3 cut(s)	1508, 1631, 1874
RsaI	GTAC	3 cut(s)	825, 963, 1448
RsaNI	GTAC	3 cut(s)	824, 962, 1447
RseI	CAYNNNNRTG	2 cut(s)	68, 930
SacI	GAGCTC	1 cut(s)	452
SaqAI	TTAA	3 cut(s)	776, 1034, 1473
Sau3AI	GATC	8 cut(s)	28, 136, 370, 424, 1138, 1198, 1289, 1537
Sau96I	GGNCC	5 cut(s)	337, 529, 597, 619, 1546
SchI	GAGTC	2 cut(s)	1373, 1759
SduI	GDGCHC	4 cut(s)	24, 452, 1581, 1699
SfaNI	GCATC	4 cut(s)	734, 1227, 1444, 1505
SfcI	CTRYAG	2 cut(s)	1800, 1869
SinI	GGWCC	1 cut(s)	337
SmaI	CCCGGG	1 cut(s)	334
SmiMI	CAYNNNNRTG	2 cut(s)	68, 930
SmlI	CTYRAG	4 cut(s)	142, 917, 1418, 1644
SmoI	CTYRAG	4 cut(s)	142, 917, 1418, 1644
Sse9I	AATT	5 cut(s)	342, 739, 1031, 1343, 1570
SseBI	AGGCCT	1 cut(s)	176
SspMI	CTAG	1 cut(s)	642
SstI	GAGCTC	1 cut(s)	452
StuI	AGGCCT	1 cut(s)	176
StyI	CCWWGG	1 cut(s)	69
TaaI	ACNGT	6 cut(s)	14, 635, 714, 1397, 1439, 1563
TaiI	ACGT	2 cut(s)	685, 1731
TaqI	TCGA	7 cut(s)	135, 320, 446, 522, 1249, 1258, 1925
TasI	AATT	5 cut(s)	342, 739, 1031, 1343, 1570
TauI	GCSGC	6 cut(s)	479, 530, 787, 1793, 1880, 1949
TfiI	GAWTC	8 cut(s)	147, 322, 443, 469, 1669, 1679, 1687, 1958
Tru1I	TTAA	3 cut(s)	776, 1034, 1473
Tru9I	TTAA	3 cut(s)	776, 1034, 1473
TscAI	CASTG	3 cut(s)	1033, 1689, 1819
TseFI	GTSAC	3 cut(s)	1365, 1433, 1635
Tsp45I	GTSAC	3 cut(s)	1365, 1433, 1635
TspDTI	ATGAA	7 cut(s)	314, 837, 1146, 1418, 1583, 1836, 1950
TspGWI	ACGGA	3 cut(s)	659, 1302, 1464
TspMI	CCCGGG	1 cut(s)	332
TspRI	CASTG	3 cut(s)	1033, 1689, 1819
Van91I	CCANNNNNTGG	2 cut(s)	671, 1729
VpaK11BI	GGWCC	1 cut(s)	337
XagI	CCTNNNNNAGG	1 cut(s)	759
XapI	RAATTY	1 cut(s)	739
XbaI	TCTAGA	1 cut(s)	641
XceI	RCATGY	1 cut(s)	8
XmaI	CCCGGG	1 cut(s)	332
XmiI	GTMKAC	1 cut(s)	9
XspI	CTAG	1 cut(s)	642
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.