Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0012660

Physical Location & Seq

Genomic Coordinates Forward (+)

41387317 .. 41392921

Gene Structure 5605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG217100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGATTACTCCTACACACAAACCCCTCAACCTGACCCTAACCAATACCAGCACCCATACCAATCTCAACCTCAACAACCACCACCACCATATGACCCTTCAACAATTCAACCCTATGATCCTCACTCATACTATTATTCCTATGATCCAAACCACCTCTACCAATATTTCAATCCCACATCCCAAGATTACACCACTAACCCCCAATTGTACCAAGAACCCACTTCGATTCATCCTCCCGGCGTCCCGATTCCGGCGCCTCCGCCCCAGACGGCGGATTCCGACGCGGCCCAGTTGCAGAATGCGTATTATGGACATGGGGTTGTGGAGAATCAGCACCAGCAGCCAATCAATTCGGGTTCGGGTTCGGGTCAGGCAGCGGTTTCGGAGATAACCCAGATTCCGGGGAGGGTGGAGGTGGCGCAGGTAGCCTCTCAACCACAGATTGGGCAAACTCCATATAGAGGTGGAGGAAGGAGGGGCAATAGGCCCTTCCGAGGGGGTGGTCGGGGCCATTTGGGTTACCATGGTCATGGACCAGATGGCTCGGCACCACCTTTGCATGGTAGGGGACGTGGCCAGGGTGGTGGTAGGCACTTTCAACTGTATGGTGCTGCATCGAGCAATCCAAATTCAGCATCTGTACCAGCTGAAGGCGTAGCTGCTTTAAAGCAGTCGCCTTCAGCATTGGTCCCTTTGCAGGCACCATTACCTGTACCAACACAAGTGTCTTCTGCTTCATTCTGGCGACTTCCTCGTATGGCTTGGTGTGAACTTTGTAGGGTTGACTGCAACACTCTTGAAACCCTTGAGCAGCATAAAAATGGAAAGCGGCATAAAAAAATTCTGCAGGTTCATGAGGAGTTGCAGAAACACAACAAAGTCAATACTGAACAGCAGAATGCACAAATGCCCAACAATGAATTAAAACCAGAAGTTGGTCAGACTGAGAAAGTTGAGGGATCTGAGGAAAAGCAACCCTCAGAAGAAAAACTGACCTCAGAAGAAGTTACTGATGATAATAGAAATGAAACAGATCAAAGAGAAGCAGTGGGAAATTCTGAAGCTTCTGAAGAACCTGAGAACAAGTCCAGGGATCACTTTGCAGCTCGGGGACGTGGATTCAAGCGTAGGATGCGAGGGGGTCGAGGGGGTAAGTATATGAGGACATATGAAGGATCAAGAAGACTAGTTGAGCCTCCTAAACCCAAAGTGATTCCTTTCATATGTGAATTGTGCAATGTCAAGTGTGAGTCACAGGTGGTTTTTGATAGTCATTTGAGTGGTAAAAAGCACCTAGCAACCCTCAAGAGGTTTCAAAGCCACCGAGCTTTGTATGGAGAACAGGGACTTCAAGCACTTTACCCACCTAACTTAACTGCTGCGTCAACTTCAGTCGCCCCTCATGTAGAGCAAGCCACCCCTCATGTAGAGCAAGTTGCCCCTCCTCATGTACAGCAAGTCACCCCTCCTCATGTACAGCAAGTCACCCCTCCTCGTGTACAGCAAGGTGTCATTGATCCGCAGGTCTTCTTGGCGCAAGTCCAGCAAGGTGGCAATGATCCTGAGGTCCTGTTGGGCAAACTATTGATGTCTTATATGCTCTCTAAAACCCAAGCACAAGAAATAGCACCCGCTTCGGGGCCTACATCTACCGTGGCCACAGCTCCAGGAACAAATATTGAAACTCAAAATCAACTGCAGTCACATATCCAAGGATTACTAGCGATGTGTCAAAATGGGTTCCAAAATGCAGTTATGGTGGGCGCCAAAAGTCAGCTGCAATCTGGCACCTTGAATTCTGAAGCCCCAGCAGCCGGAAACAGAGACACAAACACTGGGAACGGAACTTTGCAGATTCATGCAAAGGAGGAAAGTGTTCCTAAAAATGATTCAGTTGTGGCGCCAGCAGAGAACGCAGGCCCAAGCAAGCAAGTTTCTGAAAAAGCATCACTTGAAGAATGTGAAGTTGCCTCGGCCTCCAGTTCAGCCAGAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-met

Protein Analysis

666

Amino Acids

72.43

Weight (kDa)

6.5

Isoelectric Point (pI)

55.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	408 - 432	1.9e-08	Zinc-finger of C2H2 type
zf-C2H2_jaz	PF12171	408 - 432	2.7e-06	Zinc-finger double-stranded RNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012660)

Species	Orthologous Gene IDs
malus_domestica	MD02G1210900.v1.1 MD07G1114400.v1.1
prunus_persica	Prupe.2G137000_v2.0.a1
pyrus_communis	pycom02g17390 pycom07g09930 pycom07g09940
rosa_chinensis	RchiOBHm_Chr1g0349021
rosa_laevigata	RLG00000028611
rosa_multiflora	Rmu_sc0009855.1_g000008 Rmu_sc0015786.1_g000001 Rmu_sc0038026.1_g000001
rosa_roxburghii	Rroxscaffold_4G00306230
rosa_rugosa	Rorug01G0199500
rosa_samantha	Rh1AG217100 Rh1BG182600 Rh1CG201500 Rh1DG212600
rosa_wichuraiana	Rw0G005390 Rw1G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	415, 841, 1516
AccB1I	GGYRCC	6 cut(s)	256, 550, 703, 1766, 1790, 1903
AccB7I	CCANNNNNTGG	2 cut(s)	446, 938
AccII	CGCG	1 cut(s)	287
AciI	CCGC	7 cut(s)	263, 275, 287, 380, 832, 1523, 1635
AclWI	GGATC	7 cut(s)	113, 140, 970, 1104, 1186, 1514, 1556
AcoI	YGGCCR	2 cut(s)	577, 1659
AcsI	RAATTY	4 cut(s)	631, 843, 1057, 1798
AcuI	CTGAAG	6 cut(s)	666, 672, 1083, 1092, 1377, 1824
AcyI	GRCGYC	4 cut(s)	243, 257, 1767, 1904
AfaI	GTAC	6 cut(s)	212, 645, 717, 1455, 1479, 1503
AhlI	ACTAGT	1 cut(s)	1189
AjiI	CACGTC	2 cut(s)	575, 1118
AjnI	CCWGG	3 cut(s)	579, 1091, 1669
AluBI	AGCT	7 cut(s)	650, 662, 1067, 1109, 1331, 1667, 1780
AluI	AGCT	7 cut(s)	650, 662, 1067, 1109, 1331, 1667, 1780
Alw26I	GTCTC	1 cut(s)	1821
AlwI	GGATC	7 cut(s)	113, 140, 970, 1104, 1186, 1514, 1556
AlwNI	CAGNNNCTG	2 cut(s)	641, 1998
Ama87I	CYCGRG	1 cut(s)	1110
AoxI	GGCC	8 cut(s)	288, 488, 511, 577, 1643, 1659, 1921, 1977
ApeKI	GCWGC	9 cut(s)	343, 377, 614, 662, 814, 1106, 1382, 1780, 1814
ApoI	RAATTY	4 cut(s)	631, 843, 1057, 1798
Asp700I	GAANNNNTTC	1 cut(s)	1878
AspLEI	GCGC	5 cut(s)	259, 424, 1540, 1769, 1906
AspS9I	GGNCC	8 cut(s)	289, 489, 511, 536, 691, 1570, 1643, 1922
AsuC2I	CCSGG	2 cut(s)	240, 405
AsuHPI	GGTGA	2 cut(s)	1456, 1480
AvaI	CYCGRG	1 cut(s)	1110
AvaII	GGWCC	3 cut(s)	536, 691, 1570
AxyI	CCTNAGG	1 cut(s)	1566
BalI	TGGCCA	2 cut(s)	579, 1661
BanI	GGYRCC	6 cut(s)	256, 550, 703, 1766, 1790, 1903
BauI	CACGAG	1 cut(s)	1497
BbsI	GAAGAC	3 cut(s)	723, 1192, 1522
BbvI	GCAGC	9 cut(s)	355, 389, 601, 649, 826, 1118, 1369, 1767, 1826
BccI	CCATC	1 cut(s)	536
BceAI	ACGGC	1 cut(s)	288
BcgI	CGANNNNNNTGC	4 cut(s)	366, 400, 1620, 1654
BciT130I	CCWGG	3 cut(s)	581, 1093, 1671
BcnI	CCSGG	2 cut(s)	240, 405
BcoDI	GTCTC	1 cut(s)	1821
BcuI	ACTAGT	1 cut(s)	1189
BfaI	CTAG	3 cut(s)	1190, 1298, 1724
BfmI	CTRYAG	2 cut(s)	848, 1700
BfoI	RGCGCY	3 cut(s)	260, 1770, 1907
BfuAI	ACCTGC	3 cut(s)	415, 841, 1516
Bme1390I	CCNGG	5 cut(s)	240, 405, 581, 1093, 1671
Bme18I	GGWCC	3 cut(s)	536, 691, 1570
BmeT110I	CYCGRG	1 cut(s)	1110
BmgBI	CACGTC	2 cut(s)	575, 1118
BmgT120I	GGNCC	8 cut(s)	289, 489, 511, 536, 691, 1570, 1643, 1922
BmrFI	CCNGG	5 cut(s)	240, 405, 581, 1093, 1671
BmrI	ACTGGG	2 cut(s)	286, 1848
BmsI	GCATC	4 cut(s)	626, 647, 1125, 1958
BmuI	ACTGGG	2 cut(s)	286, 1848
BpiI	GAAGAC	3 cut(s)	723, 1192, 1522
BpmI	CTGGAG	2 cut(s)	1653, 1966
BpuEI	CTTGAG	2 cut(s)	830, 1292
BpuMI	CCSGG	2 cut(s)	240, 405
BsaHI	GRCGYC	4 cut(s)	243, 257, 1767, 1904
BsaJI	CCNNGG	8 cut(s)	404, 496, 526, 580, 1092, 1656, 1714, 1974
Bse1I	ACTGG	3 cut(s)	292, 1843, 1983
Bse21I	CCTNAGG	1 cut(s)	1566
Bse3DI	GCAATG	2 cut(s)	1246, 1564
BseBI	CCWGG	3 cut(s)	581, 1093, 1671
BseDI	CCNNGG	8 cut(s)	404, 496, 526, 580, 1092, 1656, 1714, 1974
BseGI	GGATG	3 cut(s)	179, 232, 1140
BseMI	GCAATG	2 cut(s)	1246, 1564
BseMII	CTCAG	6 cut(s)	939, 957, 996, 1014, 1071, 1557
BseNI	ACTGG	3 cut(s)	292, 1843, 1983
BseRI	GAGGAG	4 cut(s)	875, 1437, 1461, 1485
BseXI	GCAGC	9 cut(s)	355, 389, 601, 649, 826, 1118, 1369, 1767, 1826
BseYI	CCCAGC	1 cut(s)	1810
Bsh1236I	CGCG	1 cut(s)	287
BshFI	GGCC	8 cut(s)	290, 490, 513, 579, 1645, 1661, 1923, 1979
BshNI	GGYRCC	6 cut(s)	256, 550, 703, 1766, 1790, 1903
BsiHKCI	CYCGRG	1 cut(s)	1110
BsiSI	CCGG	4 cut(s)	240, 254, 404, 1818
BslFI	GGGAC	5 cut(s)	230, 585, 677, 1128, 1362
BsmAI	GTCTC	1 cut(s)	1821
BsmFI	GGGAC	5 cut(s)	230, 585, 677, 1128, 1362
BsmI	GAATGC	2 cut(s)	307, 907
BsnI	GGCC	8 cut(s)	290, 490, 513, 579, 1645, 1661, 1923, 1979
BsoBI	CYCGRG	1 cut(s)	1110
Bsp1407I	TGTACA	3 cut(s)	1453, 1477, 1501
Bsp143I	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1519, 1561
Bsp19I	CCATGG	1 cut(s)	526
BspACI	CCGC	7 cut(s)	263, 275, 287, 380, 832, 1523, 1635
BspANI	GGCC	8 cut(s)	290, 490, 513, 579, 1645, 1661, 1923, 1979
BspCNI	CTCAG	6 cut(s)	940, 958, 995, 1013, 1072, 1558
BspFNI	CGCG	1 cut(s)	287
BspHI	TCATGA	1 cut(s)	856
BspMAI	CTGCAG	2 cut(s)	852, 1704
BspMI	ACCTGC	3 cut(s)	415, 841, 1516
BspPI	GGATC	7 cut(s)	113, 140, 970, 1104, 1186, 1514, 1556
BspT107I	GGYRCC	6 cut(s)	256, 550, 703, 1766, 1790, 1903
BsrDI	GCAATG	2 cut(s)	1246, 1564
BsrGI	TGTACA	3 cut(s)	1453, 1477, 1501
BsrI	ACTGG	3 cut(s)	292, 1843, 1983
BssECI	CCNNGG	8 cut(s)	404, 496, 526, 580, 1092, 1656, 1714, 1974
BssMI	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1519, 1561
BssNI	GRCGYC	4 cut(s)	243, 257, 1767, 1904
BssSI	CACGAG	1 cut(s)	1497
BssT1I	CCWWGG	2 cut(s)	526, 1714
Bst2BI	CACGAG	1 cut(s)	1497
Bst2UI	CCWGG	3 cut(s)	581, 1093, 1671
Bst4CI	ACNGT	2 cut(s)	606, 1657
BstACI	GRCGYC	4 cut(s)	243, 257, 1767, 1904
BstAUI	TGTACA	3 cut(s)	1453, 1477, 1501
BstC8I	GCNNGC	5 cut(s)	702, 1416, 1908, 1921, 1931
BstDEI	CTNAG	6 cut(s)	948, 966, 982, 1000, 1080, 1566
BstDSI	CCRYGG	2 cut(s)	526, 1656
BstEII	GGTNACC	1 cut(s)	521
BstF5I	GGATG	3 cut(s)	179, 232, 1140
BstFNI	CGCG	1 cut(s)	287
BstH2I	RGCGCY	3 cut(s)	260, 1770, 1907
BstHHI	GCGC	5 cut(s)	259, 424, 1540, 1769, 1906
BstKTI	GATC	8 cut(s)	121, 148, 965, 1039, 1099, 1181, 1522, 1564
BstMAI	GTCTC	1 cut(s)	1821
BstMBI	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1519, 1561
BstMWI	GCNNNNNNNGC	6 cut(s)	343, 428, 1135, 1546, 1814, 1916
BstNI	CCWGG	3 cut(s)	581, 1093, 1671
BstPI	GGTNACC	1 cut(s)	521
BstSCI	CCNGG	5 cut(s)	238, 403, 579, 1091, 1669
BstSFI	CTRYAG	2 cut(s)	848, 1700
BstUI	CGCG	1 cut(s)	287
BstV1I	GCAGC	9 cut(s)	355, 389, 601, 649, 826, 1118, 1369, 1767, 1826
BstV2I	GAAGAC	3 cut(s)	723, 1192, 1522
BstX2I	RGATCY	1 cut(s)	962
BstXI	CCANNNNNNTGG	3 cut(s)	533, 587, 1553
BstYI	RGATCY	1 cut(s)	962
Bsu36I	CCTNAGG	1 cut(s)	1566
BsuRI	GGCC	8 cut(s)	290, 490, 513, 579, 1645, 1661, 1923, 1979
BtgI	CCRYGG	2 cut(s)	526, 1656
BtgZI	GCGATG	1 cut(s)	1742
BtrI	CACGTC	2 cut(s)	575, 1118
BtsCI	GGATG	3 cut(s)	179, 232, 1140
BtsI	GCAGTG	1 cut(s)	1056
BtsIMutI	CAGTG	2 cut(s)	1056, 1836
BveI	ACCTGC	3 cut(s)	415, 841, 1516
Cac8I	GCNNGC	5 cut(s)	702, 1416, 1908, 1921, 1931
CaiI	CAGNNNCTG	2 cut(s)	641, 1998
CciI	TCATGA	1 cut(s)	856
CfoI	GCGC	5 cut(s)	259, 424, 1540, 1769, 1906
Cfr13I	GGNCC	8 cut(s)	289, 489, 511, 536, 691, 1570, 1643, 1922
CseI	GACGC	3 cut(s)	232, 293, 1374
Csp6I	GTAC	6 cut(s)	211, 644, 716, 1454, 1478, 1502
CviQI	GTAC	6 cut(s)	211, 644, 716, 1454, 1478, 1502
DdeI	CTNAG	6 cut(s)	948, 966, 982, 1000, 1080, 1566
DinI	GGCGCC	3 cut(s)	258, 1768, 1905
DpnI	GATC	8 cut(s)	120, 147, 964, 1038, 1098, 1180, 1521, 1563
DpnII	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1519, 1561
DraI	TTTAAA	1 cut(s)	669
EaeI	YGGCCR	2 cut(s)	577, 1659
EciI	GGCGGA	2 cut(s)	252, 290
Eco130I	CCWWGG	2 cut(s)	526, 1714
Eco47I	GGWCC	3 cut(s)	536, 691, 1570
Eco57I	CTGAAG	6 cut(s)	666, 672, 1083, 1092, 1377, 1824
Eco81I	CCTNAGG	1 cut(s)	1566
Eco88I	CYCGRG	1 cut(s)	1110
Eco91I	GGTNACC	1 cut(s)	521
EcoO109I	RGGNCCY	3 cut(s)	489, 1570, 1643
EcoO65I	GGTNACC	1 cut(s)	521
EcoRI	GAATTC	1 cut(s)	1798
EcoRII	CCWGG	3 cut(s)	579, 1091, 1669
EcoT14I	CCWWGG	2 cut(s)	526, 1714
EgeI	GGCGCC	3 cut(s)	258, 1768, 1905
EheI	GGCGCC	3 cut(s)	258, 1768, 1905
ErhI	CCWWGG	2 cut(s)	526, 1714
FalI	AAGNNNNNCTT	2 cut(s)	1938, 1970
FaqI	GGGAC	5 cut(s)	230, 585, 677, 1128, 1362
FauI	CCCGC	1 cut(s)	1642
FauNDI	CATATG	3 cut(s)	91, 1171, 1226
FokI	GGATG	3 cut(s)	166, 219, 1147
FspBI	CTAG	3 cut(s)	1190, 1298, 1724
GlaI	GCGC	5 cut(s)	258, 423, 1539, 1768, 1905
GsaI	CCCAGC	1 cut(s)	1814
GsuI	CTGGAG	2 cut(s)	1653, 1966
HaeII	RGCGCY	3 cut(s)	260, 1770, 1907
HaeIII	GGCC	8 cut(s)	290, 490, 513, 579, 1645, 1661, 1923, 1979
HapII	CCGG	4 cut(s)	240, 254, 404, 1818
HgaI	GACGC	3 cut(s)	232, 293, 1374
HhaI	GCGC	5 cut(s)	259, 424, 1540, 1769, 1906
Hin1I	GRCGYC	4 cut(s)	243, 257, 1767, 1904
Hin6I	GCGC	5 cut(s)	257, 422, 1538, 1767, 1904
HinP1I	GCGC	5 cut(s)	257, 422, 1538, 1767, 1904
HincII	GTYRAC	2 cut(s)	787, 1389
HindII	GTYRAC	2 cut(s)	787, 1389
HindIII	AAGCTT	1 cut(s)	1065
HpaII	CCGG	4 cut(s)	240, 254, 404, 1818
HphI	GGTGA	2 cut(s)	1456, 1480
Hpy166II	GTNNAC	4 cut(s)	773, 787, 1389, 1502
Hpy188III	TCNNGA	6 cut(s)	247, 800, 857, 1182, 1309, 1565
Hpy8I	GTNNAC	4 cut(s)	773, 787, 1389, 1502
Hpy99I	CGWCG	1 cut(s)	287
HpyAV	CCTTC	6 cut(s)	108, 468, 502, 647, 690, 1169
HpyCH4III	ACNGT	2 cut(s)	606, 1657
HpyCH4IV	ACGT	2 cut(s)	574, 1117
HpyF10VI	GCNNNNNNNGC	6 cut(s)	343, 428, 1135, 1546, 1814, 1916
HpyF3I	CTNAG	6 cut(s)	948, 966, 982, 1000, 1080, 1566
HpySE526I	ACGT	2 cut(s)	574, 1117
Hsp92I	GRCGYC	4 cut(s)	243, 257, 1767, 1904
HspAI	GCGC	5 cut(s)	257, 422, 1538, 1767, 1904
KasI	GGCGCC	3 cut(s)	256, 1766, 1903
Kzo9I	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1519, 1561
LmnI	GCTCC	1 cut(s)	1672
Lsp1109I	GCAGC	9 cut(s)	355, 389, 601, 649, 826, 1118, 1369, 1767, 1826
LweI	GCATC	4 cut(s)	626, 647, 1125, 1958
MaeI	CTAG	3 cut(s)	1190, 1298, 1724
MaeII	ACGT	2 cut(s)	574, 1117
MaeIII	GTNAC	6 cut(s)	521, 1009, 1254, 1462, 1486, 1704
MalI	GATC	8 cut(s)	120, 147, 964, 1038, 1098, 1180, 1521, 1563
MboI	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1519, 1561
MboII	GAAGA	7 cut(s)	723, 998, 1016, 1085, 1197, 1522, 1970
MfeI	CAATTG	1 cut(s)	206
MflI	RGATCY	1 cut(s)	962
MlsI	TGGCCA	2 cut(s)	579, 1661
MluCI	AATT	9 cut(s)	105, 206, 352, 631, 843, 923, 1057, 1232, 1798
MluNI	TGGCCA	2 cut(s)	579, 1661
Mly113I	GGCGCC	3 cut(s)	257, 1767, 1904
MlyI	GAGTC	1 cut(s)	1262
MmeI	TCCRAC	1 cut(s)	306
Mox20I	TGGCCA	2 cut(s)	579, 1661
MroXI	GAANNNNTTC	1 cut(s)	1878
MscI	TGGCCA	2 cut(s)	579, 1661
MseI	TTAA	3 cut(s)	668, 926, 1376
MslI	CAYNNNNRTG	3 cut(s)	531, 822, 1281
Msp20I	TGGCCA	2 cut(s)	579, 1661
MspA1I	CMGCKG	3 cut(s)	380, 650, 1780
MspI	CCGG	4 cut(s)	240, 254, 404, 1818
MspR9I	CCNGG	5 cut(s)	240, 405, 581, 1093, 1671
MunI	CAATTG	1 cut(s)	206
Mva1269I	GAATGC	2 cut(s)	307, 907
MvaI	CCWGG	3 cut(s)	581, 1093, 1671
MvnI	CGCG	1 cut(s)	287
MwoI	GCNNNNNNNGC	6 cut(s)	343, 428, 1135, 1546, 1814, 1916
NarI	GGCGCC	3 cut(s)	257, 1767, 1904
NciI	CCSGG	2 cut(s)	240, 405
NcoI	CCATGG	1 cut(s)	526
NdeI	CATATG	3 cut(s)	91, 1171, 1226
NdeII	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1519, 1561
NmeAIII	GCCGAG	2 cut(s)	527, 1955
NmuCI	GTSAC	4 cut(s)	1254, 1462, 1486, 1704
PagI	TCATGA	1 cut(s)	856
PctI	GAATGC	2 cut(s)	307, 907
PdmI	GAANNNNTTC	1 cut(s)	1878
PfeI	GAWTC	9 cut(s)	229, 250, 278, 331, 400, 1122, 1216, 1858, 1892
PflMI	CCANNNNNTGG	2 cut(s)	446, 938
PfoI	TCCNGGA	1 cut(s)	1669
PleI	GAGTC	1 cut(s)	1261
PluTI	GGCGCC	3 cut(s)	260, 1770, 1907
PpsI	GAGTC	1 cut(s)	1261
PpuMI	RGGWCCY	1 cut(s)	1570
Psp5II	RGGWCCY	1 cut(s)	1570
Psp6I	CCWGG	3 cut(s)	579, 1091, 1669
PspEI	GGTNACC	1 cut(s)	521
PspFI	CCCAGC	1 cut(s)	1810
PspGI	CCWGG	3 cut(s)	579, 1091, 1669
PspPI	GGNCC	8 cut(s)	289, 489, 511, 536, 691, 1570, 1643, 1922
PspPPI	RGGWCCY	1 cut(s)	1570
PstI	CTGCAG	2 cut(s)	852, 1704
PstNI	CAGNNNCTG	2 cut(s)	641, 1998
PsuI	RGATCY	1 cut(s)	962
PvuII	CAGCTG	2 cut(s)	650, 1780
RsaI	GTAC	6 cut(s)	212, 645, 717, 1455, 1479, 1503
RsaNI	GTAC	6 cut(s)	211, 644, 716, 1454, 1478, 1502
RseI	CAYNNNNRTG	3 cut(s)	531, 822, 1281
SaqAI	TTAA	3 cut(s)	668, 926, 1376
Sau3AI	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1519, 1561
Sau96I	GGNCC	8 cut(s)	289, 489, 511, 536, 691, 1570, 1643, 1922
SchI	GAGTC	1 cut(s)	1262
ScrFI	CCNGG	5 cut(s)	240, 405, 581, 1093, 1671
SfaNI	GCATC	4 cut(s)	626, 647, 1125, 1958
SfcI	CTRYAG	2 cut(s)	848, 1700
SfoI	GGCGCC	3 cut(s)	258, 1768, 1905
SinI	GGWCC	3 cut(s)	536, 691, 1570
SmiMI	CAYNNNNRTG	3 cut(s)	531, 822, 1281
SmlI	CTYRAG	2 cut(s)	809, 1307
SmoI	CTYRAG	2 cut(s)	809, 1307
SpeI	ACTAGT	1 cut(s)	1189
Sse9I	AATT	9 cut(s)	105, 206, 352, 631, 843, 923, 1057, 1232, 1798
SsiI	CCGC	7 cut(s)	263, 275, 287, 380, 832, 1523, 1635
SspDI	GGCGCC	3 cut(s)	256, 1766, 1903
SspI	AATATT	2 cut(s)	167, 1681
SspMI	CTAG	3 cut(s)	1190, 1298, 1724
StyD4I	CCNGG	5 cut(s)	238, 403, 579, 1091, 1669
StyI	CCWWGG	2 cut(s)	526, 1714
TaaI	ACNGT	2 cut(s)	606, 1657
TaiI	ACGT	2 cut(s)	577, 1120
TaqI	TCGA	3 cut(s)	227, 620, 1147
TasI	AATT	9 cut(s)	105, 206, 352, 631, 843, 923, 1057, 1232, 1798
TatI	WGTACW	3 cut(s)	1453, 1477, 1501
TauI	GCSGC	2 cut(s)	290, 835
TfiI	GAWTC	9 cut(s)	229, 250, 278, 331, 400, 1122, 1216, 1858, 1892
Tru1I	TTAA	3 cut(s)	668, 926, 1376
Tru9I	TTAA	3 cut(s)	668, 926, 1376
TscAI	CASTG	2 cut(s)	1056, 1843
TseFI	GTSAC	4 cut(s)	1254, 1462, 1486, 1704
TseI	GCWGC	9 cut(s)	343, 377, 614, 662, 814, 1106, 1382, 1780, 1814
Tsp45I	GTSAC	4 cut(s)	1254, 1462, 1486, 1704
TspDTI	ATGAA	8 cut(s)	221, 729, 845, 936, 1044, 1188, 1213, 1850
TspGWI	ACGGA	1 cut(s)	1860
TspRI	CASTG	2 cut(s)	1056, 1843
Van91I	CCANNNNNTGG	2 cut(s)	446, 938
VpaK11BI	GGWCC	3 cut(s)	536, 691, 1570
XapI	RAATTY	4 cut(s)	631, 843, 1057, 1798
XmnI	GAANNNNTTC	1 cut(s)	1878
XspI	CTAG	3 cut(s)	1190, 1298, 1724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.