Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0012660

Physical Location & Seq

Genomic Coordinates Forward (+)

41375995 .. 41381576

Gene Structure 5582 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG212600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGGATTACTCCTACACACAAACCCCTCAACCTGACCCTAACCAATACCAGCACCCATACCAATCTCAACCTCAACAACCACCACCACCATATGACCCTTCAACAATTCAACCCTTTGATCCTCACTCATACTATTATTCCTATGATCCAAACCACCACTACCAATATTTCAATCCCACATCCCAAGATTACACCACTAACCCCCAATTGTACCAAGAACCCACTTCGATTCATCCTCCCGGCGTCCCGATTCCGGCGCCTCCGCCGCAGACGGCGGATTCCGACACGGCCCAGTTGCAGAATGCGTATTATGGACCTGGGGTTGTGGAGAATCAGCACCAGCAGCCAATCAATTCGGGTTCGGGTTCGAGTCAGGCACCGGTTTCGGAGATAACCCAGATTCCGGGGAAGGTGGAGGTGGCGCAGGTAGCCTCGCAACCACCGATTGGGCAAACTCCATATAGAGGTGGAGGAAGGAGGGGCAATAGGCCCTTCCGAGGGGGTGGTCGGGGCCATTTGGGTTACCATGGTCATGGACCAGATGGCTCGGCACCACCTTTGCATGGTAGGGGACGTGGTCAGGGTGGTGGTAGGCACTTTCAACTGTATGGTGCTGCATCGAGCAATCCAAATTCAGCATCTGTACCAGTTGAAGGCGTAGCTGCTTTAAAGCAGTCGCCTTCAGCATTGGTCCCTTTGCAGGCACCATTACCTGTACCAACACAAGTGTCTTCTGCTTCATTCTGGCGACTTCCTCGTATGGCTTGGTGTGAACTTTGTAGGGTTGACTGCAACACTCTTGAAACCCTTGAGCAGCATAAAAATGGAAAGCGGCATAAAAAAATTCTGCAGGTTCATGAGGAGTTGCAGAAACACAACAAAGTCAATACTGAACAGCAGAATGCACAAATGCCCAACACTGAATTAAAACCAGAAGTTGGTCAGACTGAGAAAGTTGAGGGATCTGAGGAAAAGCAACCCTCAGAAGAAAAACTGACCTCTGAAGAAGTTACTGATGATAATAGAAATGAAACAGATCAAAGAGAAGCGGTGGGAAATTCTGAAGCTTCTGAAGAACCTGAGAACAAGTCCAGGGATCACTTTGCAGCTCGGGGACGTGGATTCAAGCGTAGGATGCGAGGGGGTCGAGGGGGTAAGTATATGAGGACATATGAAGGATCAAGAAGACTAGTTGAGCCTCCTAAACCCAAAGTGATTCCTTTCATATGTGAATTGTGCAATGTCAAGTGTGAGTCACAGGTGGTTTTTGATAGTCATTTGAGTGGAAAAAAGCACCTAGCAACCCTCAAGAGGTTTCAAAGCCACCGTGCATTGTATGGAGAACAGGGACTTCAAGCACTTTACCCACCTAACTTAACTGCTGCGTCAACTTCAGTCGCCCCTCATGTAGAGCAAGCCCCCCCTCATGTAGAGCAAGTCGCCCCTCCTCATGTACAGCAAGTTAGCCCTCCTCGTGTACAGCAAGGTGTCATTGATCCTCAGGTCTTCTTGGCCCAAGTCCAGCAAGGTGGCAATGATCCTGAGGTCCTGTTGGGCAAACTATTGATGTCTTATATGCTCTCTAAAACCCAAGCACAAGAAATAGCACCCGCTCCGGGGCCTACATCTACCGTGGCTACAGCTCCAGGAACGAATATTGAAACTCAAAATCAACTGCAGTCACATATCCAAGGATTACTAGCGATGTGTCAAAATGGGTTCCAAAGTGCAGTTATGGTGGGCGCCAAAAGTCAGCCGCAATCTGGCACCTTGAATTCTGAAGCCCCAGCAGCCGGAAACAGAGACACAAACACTGGGAATGGAACTTTGCAGATTCATGCAAAGGAGGAAAGTGTTCCTATAAATGATTCAGTTGTGGCGCCAGCAGGGAACGCAGGCCCAAGCAAGCAAGTTTCTGAAAAAGCATCACTTGAAGAATGTGAAGTTGTTGCCTCGGCTCCAGTCCAGCCAAAACCTGAAAACCAAATGCAAGAGCCAGAGTCCAAGAAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-met

Protein Analysis

671

Amino Acids

73.03

Weight (kDa)

6.33

Isoelectric Point (pI)

59.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	408 - 432	1.9e-08	Zinc-finger of C2H2 type
zf-C2H2_jaz	PF12171	408 - 432	2.7e-06	Zinc-finger double-stranded RNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012660)

Species	Orthologous Gene IDs
malus_domestica	MD02G1210900.v1.1 MD07G1114400.v1.1
prunus_persica	Prupe.2G137000_v2.0.a1
pyrus_communis	pycom02g17390 pycom07g09930 pycom07g09940
rosa_chinensis	RchiOBHm_Chr1g0349021
rosa_laevigata	RLG00000028611
rosa_multiflora	Rmu_sc0009855.1_g000008 Rmu_sc0015786.1_g000001 Rmu_sc0038026.1_g000001
rosa_roxburghii	Rroxscaffold_4G00306230
rosa_rugosa	Rorug01G0199500
rosa_samantha	Rh1AG217100 Rh1BG182600 Rh1CG201500 Rh1DG212600
rosa_wichuraiana	Rw0G005390 Rw1G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	415, 841
AccB1I	GGYRCC	7 cut(s)	256, 376, 550, 703, 1742, 1766, 1879
AccB7I	CCANNNNNTGG	2 cut(s)	446, 938
AccBSI	CCGCTC	1 cut(s)	1613
AciI	CCGC	7 cut(s)	263, 266, 275, 832, 1049, 1611, 1757
AclWI	GGATC	7 cut(s)	113, 140, 970, 1104, 1186, 1490, 1532
AcsI	RAATTY	4 cut(s)	631, 843, 1057, 1774
AcuI	CTGAAG	6 cut(s)	666, 1023, 1083, 1092, 1377, 1800
AcyI	GRCGYC	4 cut(s)	243, 257, 1743, 1880
AfaI	GTAC	5 cut(s)	212, 645, 717, 1455, 1479
AgeI	ACCGGT	1 cut(s)	379
AhlI	ACTAGT	1 cut(s)	1189
AjiI	CACGTC	2 cut(s)	575, 1118
AjnI	CCWGG	3 cut(s)	316, 1091, 1645
AluBI	AGCT	4 cut(s)	662, 1067, 1109, 1643
AluI	AGCT	4 cut(s)	662, 1067, 1109, 1643
Alw26I	GTCTC	1 cut(s)	1797
AlwI	GGATC	7 cut(s)	113, 140, 970, 1104, 1186, 1490, 1532
AlwNI	CAGNNNCTG	1 cut(s)	641
Ama87I	CYCGRG	1 cut(s)	1110
AoxI	GGCC	6 cut(s)	288, 488, 511, 1512, 1619, 1897
ApeKI	GCWGC	7 cut(s)	343, 614, 662, 814, 1106, 1382, 1790
ApoI	RAATTY	4 cut(s)	631, 843, 1057, 1774
AsiGI	ACCGGT	1 cut(s)	379
Asp700I	GAANNNNTTC	1 cut(s)	1854
AspLEI	GCGC	4 cut(s)	259, 424, 1745, 1882
AsuC2I	CCSGG	3 cut(s)	240, 405, 1617
AvaI	CYCGRG	1 cut(s)	1110
AvaII	GGWCC	4 cut(s)	314, 536, 691, 1546
AxyI	CCTNAGG	2 cut(s)	1500, 1542
BanI	GGYRCC	7 cut(s)	256, 376, 550, 703, 1742, 1766, 1879
BauI	CACGAG	1 cut(s)	1473
BbsI	GAAGAC	3 cut(s)	723, 1192, 1498
BbvI	GCAGC	7 cut(s)	355, 601, 649, 826, 1118, 1369, 1802
BccI	CCATC	1 cut(s)	536
BceAI	ACGGC	2 cut(s)	288, 303
BcgI	CGANNNNNNTGC	2 cut(s)	366, 400
BciT130I	CCWGG	3 cut(s)	318, 1093, 1647
BcnI	CCSGG	3 cut(s)	240, 405, 1617
BcoDI	GTCTC	1 cut(s)	1797
BcuI	ACTAGT	1 cut(s)	1189
BfaI	CTAG	3 cut(s)	1190, 1298, 1700
BfmI	CTRYAG	3 cut(s)	848, 1638, 1676
BfoI	RGCGCY	3 cut(s)	260, 1746, 1883
BfuAI	ACCTGC	2 cut(s)	415, 841
Bme1390I	CCNGG	6 cut(s)	240, 318, 405, 1093, 1617, 1647
Bme18I	GGWCC	4 cut(s)	314, 536, 691, 1546
BmeT110I	CYCGRG	1 cut(s)	1110
BmgBI	CACGTC	2 cut(s)	575, 1118
BmrFI	CCNGG	6 cut(s)	240, 318, 405, 1093, 1617, 1647
BmrI	ACTGGG	2 cut(s)	286, 1824
BmsI	GCATC	4 cut(s)	626, 647, 1125, 1934
BmuI	ACTGGG	2 cut(s)	286, 1824
BpiI	GAAGAC	3 cut(s)	723, 1192, 1498
BpmI	CTGGAG	2 cut(s)	1629, 1944
BpuEI	CTTGAG	2 cut(s)	830, 1292
BpuMI	CCSGG	3 cut(s)	240, 405, 1617
BsaHI	GRCGYC	4 cut(s)	243, 257, 1743, 1880
BsaJI	CCNNGG	9 cut(s)	317, 404, 496, 526, 1092, 1616, 1632, 1690, 1953
BsaWI	WCCGGW	1 cut(s)	379
Bse118I	RCCGGY	1 cut(s)	379
Bse1I	ACTGG	4 cut(s)	292, 647, 1819, 1961
Bse21I	CCTNAGG	2 cut(s)	1500, 1542
Bse3DI	GCAATG	2 cut(s)	1246, 1540
BseBI	CCWGG	3 cut(s)	318, 1093, 1647
BseDI	CCNNGG	9 cut(s)	317, 404, 496, 526, 1092, 1616, 1632, 1690, 1953
BseGI	GGATG	3 cut(s)	179, 232, 1140
BseMI	GCAATG	2 cut(s)	1246, 1540
BseMII	CTCAG	6 cut(s)	939, 957, 996, 1071, 1514, 1533
BseNI	ACTGG	4 cut(s)	292, 647, 1819, 1961
BseRI	GAGGAG	3 cut(s)	875, 1437, 1461
BseXI	GCAGC	7 cut(s)	355, 601, 649, 826, 1118, 1369, 1802
BseYI	CCCAGC	1 cut(s)	1786
BsgI	GTGCAG	1 cut(s)	1749
BshFI	GGCC	6 cut(s)	290, 490, 513, 1514, 1621, 1899
BshNI	GGYRCC	7 cut(s)	256, 376, 550, 703, 1742, 1766, 1879
BshTI	ACCGGT	1 cut(s)	379
BsiHKCI	CYCGRG	1 cut(s)	1110
BsiSI	CCGG	6 cut(s)	240, 254, 380, 404, 1616, 1794
BslFI	GGGAC	5 cut(s)	230, 585, 677, 1128, 1362
BsmAI	GTCTC	1 cut(s)	1797
BsmFI	GGGAC	5 cut(s)	230, 585, 677, 1128, 1362
BsmI	GAATGC	2 cut(s)	307, 907
BsnI	GGCC	6 cut(s)	290, 490, 513, 1514, 1621, 1899
BsoBI	CYCGRG	1 cut(s)	1110
Bsp1407I	TGTACA	2 cut(s)	1453, 1477
Bsp143I	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1495, 1537
Bsp19I	CCATGG	1 cut(s)	526
BspACI	CCGC	7 cut(s)	263, 266, 275, 832, 1049, 1611, 1757
BspANI	GGCC	6 cut(s)	290, 490, 513, 1514, 1621, 1899
BspCNI	CTCAG	6 cut(s)	940, 958, 995, 1072, 1513, 1534
BspHI	TCATGA	1 cut(s)	856
BspMAI	CTGCAG	2 cut(s)	852, 1680
BspMI	ACCTGC	2 cut(s)	415, 841
BspPI	GGATC	7 cut(s)	113, 140, 970, 1104, 1186, 1490, 1532
BspT107I	GGYRCC	7 cut(s)	256, 376, 550, 703, 1742, 1766, 1879
BsrBI	CCGCTC	1 cut(s)	1613
BsrDI	GCAATG	2 cut(s)	1246, 1540
BsrFI	RCCGGY	1 cut(s)	379
BsrGI	TGTACA	2 cut(s)	1453, 1477
BsrI	ACTGG	4 cut(s)	292, 647, 1819, 1961
BssAI	RCCGGY	1 cut(s)	379
BssECI	CCNNGG	9 cut(s)	317, 404, 496, 526, 1092, 1616, 1632, 1690, 1953
BssMI	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1495, 1537
BssNI	GRCGYC	4 cut(s)	243, 257, 1743, 1880
BssSI	CACGAG	1 cut(s)	1473
BssT1I	CCWWGG	2 cut(s)	526, 1690
Bst2BI	CACGAG	1 cut(s)	1473
Bst2UI	CCWGG	3 cut(s)	318, 1093, 1647
Bst4CI	ACNGT	3 cut(s)	606, 1328, 1633
BstACI	GRCGYC	4 cut(s)	243, 257, 1743, 1880
BstAUI	TGTACA	2 cut(s)	1453, 1477
BstC8I	GCNNGC	5 cut(s)	702, 1416, 1884, 1897, 1907
BstDEI	CTNAG	6 cut(s)	948, 966, 982, 1080, 1500, 1542
BstDSI	CCRYGG	2 cut(s)	526, 1632
BstEII	GGTNACC	1 cut(s)	521
BstF5I	GGATG	3 cut(s)	179, 232, 1140
BstH2I	RGCGCY	3 cut(s)	260, 1746, 1883
BstHHI	GCGC	4 cut(s)	259, 424, 1745, 1882
BstKTI	GATC	8 cut(s)	121, 148, 965, 1039, 1099, 1181, 1498, 1540
BstMAI	GTCTC	1 cut(s)	1797
BstMBI	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1495, 1537
BstMWI	GCNNNNNNNGC	6 cut(s)	265, 343, 428, 1135, 1790, 1892
BstNI	CCWGG	3 cut(s)	318, 1093, 1647
BstPI	GGTNACC	1 cut(s)	521
BstSCI	CCNGG	6 cut(s)	238, 316, 403, 1091, 1615, 1645
BstSFI	CTRYAG	3 cut(s)	848, 1638, 1676
BstV1I	GCAGC	7 cut(s)	355, 601, 649, 826, 1118, 1369, 1802
BstV2I	GAAGAC	3 cut(s)	723, 1192, 1498
BstX2I	RGATCY	1 cut(s)	962
BstXI	CCANNNNNNTGG	2 cut(s)	533, 1529
BstYI	RGATCY	1 cut(s)	962
Bsu36I	CCTNAGG	2 cut(s)	1500, 1542
BsuRI	GGCC	6 cut(s)	290, 490, 513, 1514, 1621, 1899
BtgI	CCRYGG	2 cut(s)	526, 1632
BtgZI	GCGATG	1 cut(s)	1718
BtrI	CACGTC	2 cut(s)	575, 1118
BtsCI	GGATG	3 cut(s)	179, 232, 1140
BtsIMutI	CAGTG	2 cut(s)	918, 1812
BveI	ACCTGC	2 cut(s)	415, 841
Cac8I	GCNNGC	5 cut(s)	702, 1416, 1884, 1897, 1907
CaiI	CAGNNNCTG	1 cut(s)	641
CciI	TCATGA	1 cut(s)	856
CfoI	GCGC	4 cut(s)	259, 424, 1745, 1882
Cfr10I	RCCGGY	1 cut(s)	379
CseI	GACGC	2 cut(s)	232, 1374
Csp6I	GTAC	5 cut(s)	211, 644, 716, 1454, 1478
CspAI	ACCGGT	1 cut(s)	379
CviAII	CATG	8 cut(s)	527, 533, 563, 857, 1406, 1427, 1451, 1838
CviQI	GTAC	5 cut(s)	211, 644, 716, 1454, 1478
DdeI	CTNAG	6 cut(s)	948, 966, 982, 1080, 1500, 1542
DinI	GGCGCC	3 cut(s)	258, 1744, 1881
DpnI	GATC	8 cut(s)	120, 147, 964, 1038, 1098, 1180, 1497, 1539
DpnII	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1495, 1537
DraI	TTTAAA	1 cut(s)	669
EciI	GGCGGA	2 cut(s)	252, 290
Eco130I	CCWWGG	2 cut(s)	526, 1690
Eco47I	GGWCC	4 cut(s)	314, 536, 691, 1546
Eco57I	CTGAAG	6 cut(s)	666, 1023, 1083, 1092, 1377, 1800
Eco81I	CCTNAGG	2 cut(s)	1500, 1542
Eco88I	CYCGRG	1 cut(s)	1110
Eco91I	GGTNACC	1 cut(s)	521
EcoO109I	RGGNCCY	3 cut(s)	489, 1546, 1619
EcoO65I	GGTNACC	1 cut(s)	521
EcoRI	GAATTC	1 cut(s)	1774
EcoRII	CCWGG	3 cut(s)	316, 1091, 1645
EcoT14I	CCWWGG	2 cut(s)	526, 1690
EgeI	GGCGCC	3 cut(s)	258, 1744, 1881
EheI	GGCGCC	3 cut(s)	258, 1744, 1881
ErhI	CCWWGG	2 cut(s)	526, 1690
FaeI	CATG	8 cut(s)	530, 536, 566, 860, 1409, 1430, 1454, 1841
FalI	AAGNNNNNCTT	2 cut(s)	1914, 1946
FaqI	GGGAC	5 cut(s)	230, 585, 677, 1128, 1362
FatI	CATG	8 cut(s)	526, 532, 562, 856, 1405, 1426, 1450, 1837
FauI	CCCGC	1 cut(s)	1618
FauNDI	CATATG	3 cut(s)	91, 1171, 1226
FokI	GGATG	3 cut(s)	166, 219, 1147
FspBI	CTAG	3 cut(s)	1190, 1298, 1700
GlaI	GCGC	4 cut(s)	258, 423, 1744, 1881
GsaI	CCCAGC	1 cut(s)	1790
GsuI	CTGGAG	2 cut(s)	1629, 1944
HaeII	RGCGCY	3 cut(s)	260, 1746, 1883
HaeIII	GGCC	6 cut(s)	290, 490, 513, 1514, 1621, 1899
HapII	CCGG	6 cut(s)	240, 254, 380, 404, 1616, 1794
HgaI	GACGC	2 cut(s)	232, 1374
HhaI	GCGC	4 cut(s)	259, 424, 1745, 1882
Hin1I	GRCGYC	4 cut(s)	243, 257, 1743, 1880
Hin1II	CATG	8 cut(s)	530, 536, 566, 860, 1409, 1430, 1454, 1841
Hin6I	GCGC	4 cut(s)	257, 422, 1743, 1880
HinP1I	GCGC	4 cut(s)	257, 422, 1743, 1880
HincII	GTYRAC	2 cut(s)	787, 1389
HindII	GTYRAC	2 cut(s)	787, 1389
HindIII	AAGCTT	1 cut(s)	1065
HpaII	CCGG	6 cut(s)	240, 254, 380, 404, 1616, 1794
Hpy166II	GTNNAC	4 cut(s)	773, 787, 1389, 1478
Hpy188III	TCNNGA	6 cut(s)	247, 800, 857, 1182, 1309, 1541
Hpy8I	GTNNAC	4 cut(s)	773, 787, 1389, 1478
HpyAV	CCTTC	7 cut(s)	108, 403, 468, 502, 647, 690, 1169
HpyCH4III	ACNGT	3 cut(s)	606, 1328, 1633
HpyCH4IV	ACGT	2 cut(s)	574, 1117
HpyF10VI	GCNNNNNNNGC	6 cut(s)	265, 343, 428, 1135, 1790, 1892
HpyF3I	CTNAG	6 cut(s)	948, 966, 982, 1080, 1500, 1542
HpySE526I	ACGT	2 cut(s)	574, 1117
Hsp92I	GRCGYC	4 cut(s)	243, 257, 1743, 1880
Hsp92II	CATG	8 cut(s)	530, 536, 566, 860, 1409, 1430, 1454, 1841
HspAI	GCGC	4 cut(s)	257, 422, 1743, 1880
KasI	GGCGCC	3 cut(s)	256, 1742, 1879
Kzo9I	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1495, 1537
LmnI	GCTCC	3 cut(s)	1618, 1648, 1963
Lsp1109I	GCAGC	7 cut(s)	355, 601, 649, 826, 1118, 1369, 1802
LweI	GCATC	4 cut(s)	626, 647, 1125, 1934
MaeI	CTAG	3 cut(s)	1190, 1298, 1700
MaeII	ACGT	2 cut(s)	574, 1117
MaeIII	GTNAC	4 cut(s)	521, 1009, 1254, 1680
MalI	GATC	8 cut(s)	120, 147, 964, 1038, 1098, 1180, 1497, 1539
MbiI	CCGCTC	1 cut(s)	1613
MboI	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1495, 1537
MboII	GAAGA	7 cut(s)	723, 998, 1016, 1085, 1197, 1498, 1946
MfeI	CAATTG	1 cut(s)	206
MflI	RGATCY	1 cut(s)	962
MluCI	AATT	9 cut(s)	105, 206, 352, 631, 843, 923, 1057, 1232, 1774
Mly113I	GGCGCC	3 cut(s)	257, 1743, 1880
MlyI	GAGTC	3 cut(s)	379, 1262, 2009
MmeI	TCCRAC	1 cut(s)	306
MroXI	GAANNNNTTC	1 cut(s)	1854
MseI	TTAA	3 cut(s)	668, 926, 1376
MslI	CAYNNNNRTG	3 cut(s)	531, 822, 1281
MspI	CCGG	6 cut(s)	240, 254, 380, 404, 1616, 1794
MspR9I	CCNGG	6 cut(s)	240, 318, 405, 1093, 1617, 1647
MunI	CAATTG	1 cut(s)	206
Mva1269I	GAATGC	2 cut(s)	307, 907
MvaI	CCWGG	3 cut(s)	318, 1093, 1647
MwoI	GCNNNNNNNGC	6 cut(s)	265, 343, 428, 1135, 1790, 1892
NarI	GGCGCC	3 cut(s)	257, 1743, 1880
NciI	CCSGG	3 cut(s)	240, 405, 1617
NcoI	CCATGG	1 cut(s)	526
NdeI	CATATG	3 cut(s)	91, 1171, 1226
NdeII	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1495, 1537
NlaIII	CATG	8 cut(s)	530, 536, 566, 860, 1409, 1430, 1454, 1841
NmeAIII	GCCGAG	2 cut(s)	527, 1934
NmuCI	GTSAC	2 cut(s)	1254, 1680
PagI	TCATGA	1 cut(s)	856
PcsI	WCGNNNNNNNCGW	1 cut(s)	440
PctI	GAATGC	2 cut(s)	307, 907
PdmI	GAANNNNTTC	1 cut(s)	1854
PfeI	GAWTC	9 cut(s)	229, 250, 278, 331, 400, 1122, 1216, 1834, 1868
PflFI	GACNNNGTC	1 cut(s)	576
PflMI	CCANNNNNTGG	2 cut(s)	446, 938
PfoI	TCCNGGA	1 cut(s)	1645
PinAI	ACCGGT	1 cut(s)	379
PleI	GAGTC	3 cut(s)	378, 1261, 2008
PluTI	GGCGCC	3 cut(s)	260, 1746, 1883
PpsI	GAGTC	3 cut(s)	378, 1261, 2008
PpuMI	RGGWCCY	1 cut(s)	1546
Psp5II	RGGWCCY	1 cut(s)	1546
Psp6I	CCWGG	3 cut(s)	316, 1091, 1645
PspEI	GGTNACC	1 cut(s)	521
PspFI	CCCAGC	1 cut(s)	1786
PspGI	CCWGG	3 cut(s)	316, 1091, 1645
PspPPI	RGGWCCY	1 cut(s)	1546
PstI	CTGCAG	2 cut(s)	852, 1680
PstNI	CAGNNNCTG	1 cut(s)	641
PsuI	RGATCY	1 cut(s)	962
PsyI	GACNNNGTC	1 cut(s)	576
RsaI	GTAC	5 cut(s)	212, 645, 717, 1455, 1479
RsaNI	GTAC	5 cut(s)	211, 644, 716, 1454, 1478
RseI	CAYNNNNRTG	3 cut(s)	531, 822, 1281
SaqAI	TTAA	3 cut(s)	668, 926, 1376
Sau3AI	GATC	8 cut(s)	118, 145, 962, 1036, 1096, 1178, 1495, 1537
SchI	GAGTC	3 cut(s)	379, 1262, 2009
ScrFI	CCNGG	6 cut(s)	240, 318, 405, 1093, 1617, 1647
SfaNI	GCATC	4 cut(s)	626, 647, 1125, 1934
SfcI	CTRYAG	3 cut(s)	848, 1638, 1676
SfoI	GGCGCC	3 cut(s)	258, 1744, 1881
SinI	GGWCC	4 cut(s)	314, 536, 691, 1546
SmiMI	CAYNNNNRTG	3 cut(s)	531, 822, 1281
SmlI	CTYRAG	2 cut(s)	809, 1307
SmoI	CTYRAG	2 cut(s)	809, 1307
SpeI	ACTAGT	1 cut(s)	1189
Sse9I	AATT	9 cut(s)	105, 206, 352, 631, 843, 923, 1057, 1232, 1774
SsiI	CCGC	7 cut(s)	263, 266, 275, 832, 1049, 1611, 1757
SspDI	GGCGCC	3 cut(s)	256, 1742, 1879
SspI	AATATT	2 cut(s)	167, 1657
SspMI	CTAG	3 cut(s)	1190, 1298, 1700
StyD4I	CCNGG	6 cut(s)	238, 316, 403, 1091, 1615, 1645
StyI	CCWWGG	2 cut(s)	526, 1690
TaaI	ACNGT	3 cut(s)	606, 1328, 1633
TaiI	ACGT	2 cut(s)	577, 1120
TaqI	TCGA	4 cut(s)	227, 368, 620, 1147
TasI	AATT	9 cut(s)	105, 206, 352, 631, 843, 923, 1057, 1232, 1774
TatI	WGTACW	2 cut(s)	1453, 1477
TauI	GCSGC	3 cut(s)	268, 835, 1759
TfiI	GAWTC	9 cut(s)	229, 250, 278, 331, 400, 1122, 1216, 1834, 1868
Tru1I	TTAA	3 cut(s)	668, 926, 1376
Tru9I	TTAA	3 cut(s)	668, 926, 1376
TscAI	CASTG	2 cut(s)	925, 1819
TseFI	GTSAC	2 cut(s)	1254, 1680
TseI	GCWGC	7 cut(s)	343, 614, 662, 814, 1106, 1382, 1790
Tsp45I	GTSAC	2 cut(s)	1254, 1680
TspDTI	ATGAA	7 cut(s)	221, 729, 845, 1044, 1188, 1213, 1826
TspRI	CASTG	2 cut(s)	925, 1819
Tth111I	GACNNNGTC	1 cut(s)	576
Van91I	CCANNNNNTGG	2 cut(s)	446, 938
VpaK11BI	GGWCC	4 cut(s)	314, 536, 691, 1546
XapI	RAATTY	4 cut(s)	631, 843, 1057, 1774
XmnI	GAANNNNTTC	1 cut(s)	1854
XspI	CTAG	3 cut(s)	1190, 1298, 1700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.