Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0012660

Physical Location & Seq

Genomic Coordinates Forward (+)

40772228 .. 40777312

Gene Structure 5085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G018460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGATTACTCCTACACACAAACCCCTCAACCAGACCCTAACCAATACCAGCACCCTTACCAATCTCAACCTCAACCTCAACAACCACCACCACCATATGACCCTTCAACAATTCAACCCTATGATCCTCACTCATACTATTATTCCTATGATCCAAACCACCTCTACCAATATTTCAATCCCACATCCCAAGATTACACCACTAACCCCCAATTGTACCAAGAACCCACTTCGATTCATCCTCCCGGCGTCCCGATTCCGGCGCCTCCGCCCCAGACGGCGGATTCCGACGCGGCCCAGTTGCAGAATGCGTATTATGGACATGGGGTTGTGGAGAATCAGCACCAGCAGCCAATCAATTCGGGTTCGGGTTCGGGTCAGGCAGCGGTTTCGGAGATAACCCAGATTCCGGGGAAGGTGGAGGTGGCGCAGGTAGCCGAGCAACCACGCATTGGGCAAACTCCATATAGAGGTGGAGGAAGGAGGGGCAATAGGCCCTTCCGAGGGTGTGGTCGGGGCCATTTGGGTTACCATGGTCATGGACCAGATGGCTCGGCACCACCTTTGCATGGTAGGGGACGTGGCCAGGGTGGTGGTAGGCACTTTCAACTGTATGGTGCTGCATCGAGCAATCCAAATTCAGCATCTGTACCAGCTGAAGGCGTAGCTGCTTTAAAGCAGTCGCCTTCAGCATTGGTCCCTTTGCAGGCACCATTACCTGTACCAACACAAGTGTCTTCTGCTTCATTCTGGCGACTTCCTCGTATGGCTTGGTGTGAACTTTGTAGGGTTGACTGCAACACTCTTGAAACCCTTGAGCAGCATAAAAATGGAAAGCGGCATAAAAAAATTCTGCAGGTTCATGAGGAGTTGCAGAAACACAACAAAGTCAATACTGAACAGCAGAATGCACAAATGCCCAACACTGAATTAAAACCAGAAGTTGGTCAGACTGAGAAAGTTGAGGGATCTGAGGAAAAGCAACCCTCAGAAGAAAAACTGACATCCGAAGAAGTTACTGATGATAATAGAAATGAAACAGATCAAAGAGAAGCGGTGGGAAATTCTGAAGCTTCTGAAGAACCTGAGAACAAGTCCAGGGATCACTTTGCAGCTCGGGGACGTGGATTCAAGCGTAGGATGCGAGGGGGTCGAGGGGGTAAGTATATGAGGACATATGAAGGATCAAGAAGACTAGTTGAGCCTCCTAAACCCAAAGTGATTCCTTTCATATGTGAATTGTGCAATGTCAAGTGTGAGTCACAGGTGGTTTTTGATAGTCATTTGAGTGGTAAAAAGCACCTAGCAACCCTCAAGAGGTTTCAAAGCCACCGTGCTTTGTATGGAGAACAGGGACTTCAAGCACTTTACCCACCTAACTTAACTGCTGCGTCAACTTCAGTCGCCCCTCATGTAGAGCAAGTCGCCCCTCCTCACGTAGAGCAAGTCGCCCCTCCTCATGTACAGCAAGTTAGCCCTCCTCGTGTACAGCAAGGTGTCATTGATCCTCAGGTCTTCTTGGCCCAAGTCCAGCAAGGTGGCAATGATCCTGAGGTCCTGTTGGGCAAACTATTGATGTCTTATATGCTCTCTAAAACCCAAGCACAAGAAATAGCACCTGCTCCGGGGCCTACATCTACCGTGGCTACAGCTCCAGTAACGAATATTGAAACTCAAAATCAACTGCAGTCACATATCCAAGGATTACTAGCAATGTGTCAAAATGGGTTCCAAAGTGCAGTTATGGTGGGCGCGAAAAGTCAGCCGCAATCTGGCACCTTGAATTCTGAAGCCCCAGCAGCCGGAAACACAGACACAAACACTGGGAACGGAACTTTGCAGATTCATGCAAAGGAGGAAAGTGTTCCAATAAATGATTCAGTTGTGGCGCCAGCAGGGAACGCAGGCAAGCAAGTTTCTGAAAAAGCATCACTTGAAGAATGTGAAGTTGCCTCGGCCTCCAGTTCAGCCAGAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-met

Protein Analysis

659

Amino Acids

71.61

Weight (kDa)

6.4

Isoelectric Point (pI)

56.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	410 - 434	1.9e-08	Zinc-finger of C2H2 type
zf-C2H2_jaz	PF12171	410 - 434	2.7e-06	Zinc-finger double-stranded RNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012660)

Species	Orthologous Gene IDs
malus_domestica	MD02G1210900.v1.1 MD07G1114400.v1.1
prunus_persica	Prupe.2G137000_v2.0.a1
pyrus_communis	pycom02g17390 pycom07g09930 pycom07g09940
rosa_chinensis	RchiOBHm_Chr1g0349021
rosa_laevigata	RLG00000028611
rosa_multiflora	Rmu_sc0009855.1_g000008 Rmu_sc0015786.1_g000001 Rmu_sc0038026.1_g000001
rosa_roxburghii	Rroxscaffold_4G00306230
rosa_rugosa	Rorug01G0199500
rosa_samantha	Rh1AG217100 Rh1BG182600 Rh1CG201500 Rh1DG212600
rosa_wichuraiana	Rw0G005390 Rw1G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1627
Acc36I	ACCTGC	3 cut(s)	421, 847, 1627
AccB1I	GGYRCC	5 cut(s)	262, 556, 709, 1775, 1888
AccB7I	CCANNNNNTGG	2 cut(s)	452, 944
AccII	CGCG	2 cut(s)	293, 1754
AciI	CCGC	7 cut(s)	269, 281, 293, 386, 838, 1055, 1766
AclWI	GGATC	7 cut(s)	119, 146, 976, 1110, 1192, 1499, 1541
AcoI	YGGCCR	1 cut(s)	583
AcsI	RAATTY	4 cut(s)	637, 849, 1063, 1783
AcuI	CTGAAG	6 cut(s)	672, 678, 1089, 1098, 1383, 1809
AcyI	GRCGYC	3 cut(s)	249, 263, 1889
AfaI	GTAC	5 cut(s)	218, 651, 723, 1464, 1488
AhlI	ACTAGT	1 cut(s)	1195
AjiI	CACGTC	2 cut(s)	581, 1124
AjnI	CCWGG	2 cut(s)	585, 1097
AjuI	GAANNNNNNNTTGG	2 cut(s)	1861, 1893
AluBI	AGCT	5 cut(s)	656, 668, 1073, 1115, 1652
AluI	AGCT	5 cut(s)	656, 668, 1073, 1115, 1652
AlwI	GGATC	7 cut(s)	119, 146, 976, 1110, 1192, 1499, 1541
AlwNI	CAGNNNCTG	2 cut(s)	647, 1977
Ama87I	CYCGRG	1 cut(s)	1116
AoxI	GGCC	7 cut(s)	294, 494, 517, 583, 1521, 1628, 1956
ApeKI	GCWGC	8 cut(s)	349, 383, 620, 668, 820, 1112, 1388, 1799
ApoI	RAATTY	4 cut(s)	637, 849, 1063, 1783
Asp700I	GAANNNNTTC	1 cut(s)	1863
AspLEI	GCGC	4 cut(s)	265, 430, 1754, 1891
AspS9I	GGNCC	8 cut(s)	295, 495, 517, 542, 697, 1522, 1555, 1628
AsuC2I	CCSGG	3 cut(s)	246, 411, 1626
AvaI	CYCGRG	1 cut(s)	1116
AvaII	GGWCC	3 cut(s)	542, 697, 1555
AxyI	CCTNAGG	2 cut(s)	1509, 1551
BalI	TGGCCA	1 cut(s)	585
BanI	GGYRCC	5 cut(s)	262, 556, 709, 1775, 1888
BauI	CACGAG	1 cut(s)	1482
BbsI	GAAGAC	3 cut(s)	729, 1198, 1507
BbvI	GCAGC	8 cut(s)	361, 395, 607, 655, 832, 1124, 1375, 1811
BccI	CCATC	1 cut(s)	542
BceAI	ACGGC	1 cut(s)	294
BcgI	CGANNNNNNTGC	2 cut(s)	372, 406
BciT130I	CCWGG	2 cut(s)	587, 1099
BcnI	CCSGG	3 cut(s)	246, 411, 1626
BcuI	ACTAGT	1 cut(s)	1195
BfaI	CTAG	3 cut(s)	1196, 1304, 1709
BfmI	CTRYAG	3 cut(s)	854, 1647, 1685
BfoI	RGCGCY	2 cut(s)	266, 1892
BfuAI	ACCTGC	3 cut(s)	421, 847, 1627
Bme1390I	CCNGG	5 cut(s)	246, 411, 587, 1099, 1626
Bme18I	GGWCC	3 cut(s)	542, 697, 1555
BmeT110I	CYCGRG	1 cut(s)	1116
BmgBI	CACGTC	2 cut(s)	581, 1124
BmgT120I	GGNCC	8 cut(s)	295, 495, 517, 542, 697, 1522, 1555, 1628
BmiI	GGNNCC	9 cut(s)	264, 518, 558, 699, 711, 1629, 1730, 1777, 1890
BmrFI	CCNGG	5 cut(s)	246, 411, 587, 1099, 1626
BmrI	ACTGGG	2 cut(s)	292, 1833
BmsI	GCATC	4 cut(s)	632, 653, 1131, 1937
BmuI	ACTGGG	2 cut(s)	292, 1833
BpiI	GAAGAC	3 cut(s)	729, 1198, 1507
BpmI	CTGGAG	2 cut(s)	1638, 1945
BpuEI	CTTGAG	2 cut(s)	836, 1298
BpuMI	CCSGG	3 cut(s)	246, 411, 1626
BsaAI	YACGTR	1 cut(s)	1438
BsaHI	GRCGYC	3 cut(s)	249, 263, 1889
BsaJI	CCNNGG	9 cut(s)	410, 502, 532, 586, 1098, 1625, 1641, 1699, 1953
Bse1I	ACTGG	4 cut(s)	298, 1655, 1828, 1962
Bse21I	CCTNAGG	2 cut(s)	1509, 1551
Bse3DI	GCAATG	3 cut(s)	1252, 1549, 1719
BseBI	CCWGG	2 cut(s)	587, 1099
BseDI	CCNNGG	9 cut(s)	410, 502, 532, 586, 1098, 1625, 1641, 1699, 1953
BseGI	GGATG	4 cut(s)	185, 238, 1004, 1146
BseMI	GCAATG	3 cut(s)	1252, 1549, 1719
BseMII	CTCAG	6 cut(s)	945, 963, 1002, 1077, 1523, 1542
BseNI	ACTGG	4 cut(s)	298, 1655, 1828, 1962
BseRI	GAGGAG	4 cut(s)	881, 1422, 1446, 1470
BseXI	GCAGC	8 cut(s)	361, 395, 607, 655, 832, 1124, 1375, 1811
BseYI	CCCAGC	1 cut(s)	1795
BsgI	GTGCAG	1 cut(s)	1758
Bsh1236I	CGCG	2 cut(s)	293, 1754
BshFI	GGCC	7 cut(s)	296, 496, 519, 585, 1523, 1630, 1958
BshNI	GGYRCC	5 cut(s)	262, 556, 709, 1775, 1888
BsiHKCI	CYCGRG	1 cut(s)	1116
BsiSI	CCGG	5 cut(s)	246, 260, 410, 1625, 1803
BslFI	GGGAC	5 cut(s)	236, 591, 683, 1134, 1368
BsmFI	GGGAC	5 cut(s)	236, 591, 683, 1134, 1368
BsmI	GAATGC	2 cut(s)	313, 913
BsnI	GGCC	7 cut(s)	296, 496, 519, 585, 1523, 1630, 1958
BsoBI	CYCGRG	1 cut(s)	1116
Bsp1407I	TGTACA	2 cut(s)	1462, 1486
Bsp143I	GATC	8 cut(s)	124, 151, 968, 1042, 1102, 1184, 1504, 1546
Bsp19I	CCATGG	1 cut(s)	532
BspACI	CCGC	7 cut(s)	269, 281, 293, 386, 838, 1055, 1766
BspANI	GGCC	7 cut(s)	296, 496, 519, 585, 1523, 1630, 1958
BspCNI	CTCAG	6 cut(s)	946, 964, 1001, 1078, 1522, 1543
BspFNI	CGCG	2 cut(s)	293, 1754
BspHI	TCATGA	1 cut(s)	862
BspLI	GGNNCC	9 cut(s)	264, 518, 558, 699, 711, 1629, 1730, 1777, 1890
BspMAI	CTGCAG	2 cut(s)	858, 1689
BspMI	ACCTGC	3 cut(s)	421, 847, 1627
BspPI	GGATC	7 cut(s)	119, 146, 976, 1110, 1192, 1499, 1541
BspT107I	GGYRCC	5 cut(s)	262, 556, 709, 1775, 1888
BsrDI	GCAATG	3 cut(s)	1252, 1549, 1719
BsrGI	TGTACA	2 cut(s)	1462, 1486
BsrI	ACTGG	4 cut(s)	298, 1655, 1828, 1962
BssECI	CCNNGG	9 cut(s)	410, 502, 532, 586, 1098, 1625, 1641, 1699, 1953
BssMI	GATC	8 cut(s)	124, 151, 968, 1042, 1102, 1184, 1504, 1546
BssNI	GRCGYC	3 cut(s)	249, 263, 1889
BssSI	CACGAG	1 cut(s)	1482
BssT1I	CCWWGG	2 cut(s)	532, 1699
Bst2BI	CACGAG	1 cut(s)	1482
Bst2UI	CCWGG	2 cut(s)	587, 1099
Bst4CI	ACNGT	3 cut(s)	612, 1334, 1642
BstACI	GRCGYC	3 cut(s)	249, 263, 1889
BstAUI	TGTACA	2 cut(s)	1462, 1486
BstBAI	YACGTR	1 cut(s)	1438
BstC8I	GCNNGC	4 cut(s)	708, 1893, 1906, 1910
BstDEI	CTNAG	6 cut(s)	954, 972, 988, 1086, 1509, 1551
BstDSI	CCRYGG	2 cut(s)	532, 1641
BstEII	GGTNACC	1 cut(s)	527
BstF5I	GGATG	4 cut(s)	185, 238, 1004, 1146
BstFNI	CGCG	2 cut(s)	293, 1754
BstH2I	RGCGCY	2 cut(s)	266, 1892
BstHHI	GCGC	4 cut(s)	265, 430, 1754, 1891
BstKTI	GATC	8 cut(s)	127, 154, 971, 1045, 1105, 1187, 1507, 1549
BstMBI	GATC	8 cut(s)	124, 151, 968, 1042, 1102, 1184, 1504, 1546
BstMWI	GCNNNNNNNGC	5 cut(s)	349, 434, 1141, 1799, 1901
BstNI	CCWGG	2 cut(s)	587, 1099
BstPI	GGTNACC	1 cut(s)	527
BstSCI	CCNGG	5 cut(s)	244, 409, 585, 1097, 1624
BstSFI	CTRYAG	3 cut(s)	854, 1647, 1685
BstUI	CGCG	2 cut(s)	293, 1754
BstV1I	GCAGC	8 cut(s)	361, 395, 607, 655, 832, 1124, 1375, 1811
BstV2I	GAAGAC	3 cut(s)	729, 1198, 1507
BstX2I	RGATCY	1 cut(s)	968
BstXI	CCANNNNNNTGG	3 cut(s)	539, 593, 1538
BstYI	RGATCY	1 cut(s)	968
Bsu36I	CCTNAGG	2 cut(s)	1509, 1551
BsuRI	GGCC	7 cut(s)	296, 496, 519, 585, 1523, 1630, 1958
BtgI	CCRYGG	2 cut(s)	532, 1641
BtrI	CACGTC	2 cut(s)	581, 1124
BtsCI	GGATG	4 cut(s)	185, 238, 1004, 1146
BtsIMutI	CAGTG	2 cut(s)	924, 1821
BveI	ACCTGC	3 cut(s)	421, 847, 1627
Cac8I	GCNNGC	4 cut(s)	708, 1893, 1906, 1910
CaiI	CAGNNNCTG	2 cut(s)	647, 1977
CciI	TCATGA	1 cut(s)	862
CfoI	GCGC	4 cut(s)	265, 430, 1754, 1891
Cfr13I	GGNCC	8 cut(s)	295, 495, 517, 542, 697, 1522, 1555, 1628
CseI	GACGC	3 cut(s)	238, 299, 1380
Csp6I	GTAC	5 cut(s)	217, 650, 722, 1463, 1487
CviAII	CATG	8 cut(s)	323, 533, 539, 569, 863, 1412, 1460, 1847
CviQI	GTAC	5 cut(s)	217, 650, 722, 1463, 1487
DdeI	CTNAG	6 cut(s)	954, 972, 988, 1086, 1509, 1551
DinI	GGCGCC	2 cut(s)	264, 1890
DpnI	GATC	8 cut(s)	126, 153, 970, 1044, 1104, 1186, 1506, 1548
DpnII	GATC	8 cut(s)	124, 151, 968, 1042, 1102, 1184, 1504, 1546
DraI	TTTAAA	1 cut(s)	675
EaeI	YGGCCR	1 cut(s)	583
EciI	GGCGGA	2 cut(s)	258, 296
Eco130I	CCWWGG	2 cut(s)	532, 1699
Eco47I	GGWCC	3 cut(s)	542, 697, 1555
Eco57I	CTGAAG	6 cut(s)	672, 678, 1089, 1098, 1383, 1809
Eco81I	CCTNAGG	2 cut(s)	1509, 1551
Eco88I	CYCGRG	1 cut(s)	1116
Eco91I	GGTNACC	1 cut(s)	527
EcoO109I	RGGNCCY	3 cut(s)	495, 1555, 1628
EcoO65I	GGTNACC	1 cut(s)	527
EcoRI	GAATTC	1 cut(s)	1783
EcoRII	CCWGG	2 cut(s)	585, 1097
EcoT14I	CCWWGG	2 cut(s)	532, 1699
EgeI	GGCGCC	2 cut(s)	264, 1890
EheI	GGCGCC	2 cut(s)	264, 1890
ErhI	CCWWGG	2 cut(s)	532, 1699
FaeI	CATG	8 cut(s)	326, 536, 542, 572, 866, 1415, 1463, 1850
FalI	AAGNNNNNCTT	2 cut(s)	1917, 1949
FaqI	GGGAC	5 cut(s)	236, 591, 683, 1134, 1368
FatI	CATG	8 cut(s)	322, 532, 538, 568, 862, 1411, 1459, 1846
FauNDI	CATATG	3 cut(s)	97, 1177, 1232
FokI	GGATG	4 cut(s)	172, 225, 991, 1153
FspBI	CTAG	3 cut(s)	1196, 1304, 1709
GlaI	GCGC	4 cut(s)	264, 429, 1753, 1890
GsaI	CCCAGC	1 cut(s)	1799
GsuI	CTGGAG	2 cut(s)	1638, 1945
HaeII	RGCGCY	2 cut(s)	266, 1892
HaeIII	GGCC	7 cut(s)	296, 496, 519, 585, 1523, 1630, 1958
HapII	CCGG	5 cut(s)	246, 260, 410, 1625, 1803
HgaI	GACGC	3 cut(s)	238, 299, 1380
HhaI	GCGC	4 cut(s)	265, 430, 1754, 1891
Hin1I	GRCGYC	3 cut(s)	249, 263, 1889
Hin1II	CATG	8 cut(s)	326, 536, 542, 572, 866, 1415, 1463, 1850
Hin6I	GCGC	4 cut(s)	263, 428, 1752, 1889
HinP1I	GCGC	4 cut(s)	263, 428, 1752, 1889
HincII	GTYRAC	2 cut(s)	793, 1395
HindII	GTYRAC	2 cut(s)	793, 1395
HindIII	AAGCTT	1 cut(s)	1071
HpaII	CCGG	5 cut(s)	246, 260, 410, 1625, 1803
Hpy166II	GTNNAC	4 cut(s)	779, 793, 1395, 1487
Hpy188III	TCNNGA	6 cut(s)	253, 806, 863, 1188, 1315, 1550
Hpy8I	GTNNAC	4 cut(s)	779, 793, 1395, 1487
Hpy99I	CGWCG	1 cut(s)	293
HpyAV	CCTTC	7 cut(s)	114, 409, 474, 508, 653, 696, 1175
HpyCH4III	ACNGT	3 cut(s)	612, 1334, 1642
HpyCH4IV	ACGT	3 cut(s)	580, 1123, 1437
HpyF10VI	GCNNNNNNNGC	5 cut(s)	349, 434, 1141, 1799, 1901
HpyF3I	CTNAG	6 cut(s)	954, 972, 988, 1086, 1509, 1551
HpySE526I	ACGT	3 cut(s)	580, 1123, 1437
Hsp92I	GRCGYC	3 cut(s)	249, 263, 1889
Hsp92II	CATG	8 cut(s)	326, 536, 542, 572, 866, 1415, 1463, 1850
HspAI	GCGC	4 cut(s)	263, 428, 1752, 1889
KasI	GGCGCC	2 cut(s)	262, 1888
Kzo9I	GATC	8 cut(s)	124, 151, 968, 1042, 1102, 1184, 1504, 1546
LmnI	GCTCC	2 cut(s)	1627, 1657
Lsp1109I	GCAGC	8 cut(s)	361, 395, 607, 655, 832, 1124, 1375, 1811
LweI	GCATC	4 cut(s)	632, 653, 1131, 1937
MaeI	CTAG	3 cut(s)	1196, 1304, 1709
MaeII	ACGT	3 cut(s)	580, 1123, 1437
MaeIII	GTNAC	5 cut(s)	527, 1015, 1260, 1657, 1689
MalI	GATC	8 cut(s)	126, 153, 970, 1044, 1104, 1186, 1506, 1548
MboI	GATC	8 cut(s)	124, 151, 968, 1042, 1102, 1184, 1504, 1546
MboII	GAAGA	7 cut(s)	729, 1004, 1022, 1091, 1203, 1507, 1949
MfeI	CAATTG	1 cut(s)	212
MflI	RGATCY	1 cut(s)	968
MlsI	TGGCCA	1 cut(s)	585
MluCI	AATT	9 cut(s)	111, 212, 358, 637, 849, 929, 1063, 1238, 1783
MluNI	TGGCCA	1 cut(s)	585
Mly113I	GGCGCC	2 cut(s)	263, 1889
MlyI	GAGTC	1 cut(s)	1268
MmeI	TCCRAC	1 cut(s)	312
Mox20I	TGGCCA	1 cut(s)	585
MroXI	GAANNNNTTC	1 cut(s)	1863
MscI	TGGCCA	1 cut(s)	585
MseI	TTAA	3 cut(s)	674, 932, 1382
MslI	CAYNNNNRTG	3 cut(s)	537, 828, 1287
Msp20I	TGGCCA	1 cut(s)	585
MspA1I	CMGCKG	2 cut(s)	386, 656
MspI	CCGG	5 cut(s)	246, 260, 410, 1625, 1803
MspR9I	CCNGG	5 cut(s)	246, 411, 587, 1099, 1626
MunI	CAATTG	1 cut(s)	212
Mva1269I	GAATGC	2 cut(s)	313, 913
MvaI	CCWGG	2 cut(s)	587, 1099
MvnI	CGCG	2 cut(s)	293, 1754
MwoI	GCNNNNNNNGC	5 cut(s)	349, 434, 1141, 1799, 1901
NarI	GGCGCC	2 cut(s)	263, 1889
NciI	CCSGG	3 cut(s)	246, 411, 1626
NcoI	CCATGG	1 cut(s)	532
NdeI	CATATG	3 cut(s)	97, 1177, 1232
NdeII	GATC	8 cut(s)	124, 151, 968, 1042, 1102, 1184, 1504, 1546
NlaIII	CATG	8 cut(s)	326, 536, 542, 572, 866, 1415, 1463, 1850
NlaIV	GGNNCC	9 cut(s)	264, 518, 558, 699, 711, 1629, 1730, 1777, 1890
NmeAIII	GCCGAG	3 cut(s)	463, 533, 1934
NmuCI	GTSAC	2 cut(s)	1260, 1689
PagI	TCATGA	1 cut(s)	862
PaqCI	CACCTGC	1 cut(s)	1627
PctI	GAATGC	2 cut(s)	313, 913
PdmI	GAANNNNTTC	1 cut(s)	1863
PfeI	GAWTC	9 cut(s)	235, 256, 284, 337, 406, 1128, 1222, 1843, 1877
PflMI	CCANNNNNTGG	2 cut(s)	452, 944
PleI	GAGTC	1 cut(s)	1267
PluTI	GGCGCC	2 cut(s)	266, 1892
PpsI	GAGTC	1 cut(s)	1267
Ppu21I	YACGTR	1 cut(s)	1438
PpuMI	RGGWCCY	1 cut(s)	1555
Psp5II	RGGWCCY	1 cut(s)	1555
Psp6I	CCWGG	2 cut(s)	585, 1097
PspEI	GGTNACC	1 cut(s)	527
PspFI	CCCAGC	1 cut(s)	1795
PspGI	CCWGG	2 cut(s)	585, 1097
PspN4I	GGNNCC	9 cut(s)	264, 518, 558, 699, 711, 1629, 1730, 1777, 1890
PspPI	GGNCC	8 cut(s)	295, 495, 517, 542, 697, 1522, 1555, 1628
PspPPI	RGGWCCY	1 cut(s)	1555
PstI	CTGCAG	2 cut(s)	858, 1689
PstNI	CAGNNNCTG	2 cut(s)	647, 1977
PsuI	RGATCY	1 cut(s)	968
PvuII	CAGCTG	1 cut(s)	656
RsaI	GTAC	5 cut(s)	218, 651, 723, 1464, 1488
RsaNI	GTAC	5 cut(s)	217, 650, 722, 1463, 1487
RseI	CAYNNNNRTG	3 cut(s)	537, 828, 1287
SaqAI	TTAA	3 cut(s)	674, 932, 1382
Sau3AI	GATC	8 cut(s)	124, 151, 968, 1042, 1102, 1184, 1504, 1546
Sau96I	GGNCC	8 cut(s)	295, 495, 517, 542, 697, 1522, 1555, 1628
SchI	GAGTC	1 cut(s)	1268
ScrFI	CCNGG	5 cut(s)	246, 411, 587, 1099, 1626
SfaNI	GCATC	4 cut(s)	632, 653, 1131, 1937
SfcI	CTRYAG	3 cut(s)	854, 1647, 1685
SfoI	GGCGCC	2 cut(s)	264, 1890
SinI	GGWCC	3 cut(s)	542, 697, 1555
SmiMI	CAYNNNNRTG	3 cut(s)	537, 828, 1287
SmlI	CTYRAG	2 cut(s)	815, 1313
SmoI	CTYRAG	2 cut(s)	815, 1313
SpeI	ACTAGT	1 cut(s)	1195
Sse9I	AATT	9 cut(s)	111, 212, 358, 637, 849, 929, 1063, 1238, 1783
SsiI	CCGC	7 cut(s)	269, 281, 293, 386, 838, 1055, 1766
SspDI	GGCGCC	2 cut(s)	262, 1888
SspI	AATATT	2 cut(s)	173, 1666
SspMI	CTAG	3 cut(s)	1196, 1304, 1709
StyD4I	CCNGG	5 cut(s)	244, 409, 585, 1097, 1624
StyI	CCWWGG	2 cut(s)	532, 1699
TaaI	ACNGT	3 cut(s)	612, 1334, 1642
TaiI	ACGT	3 cut(s)	583, 1126, 1440
TaqI	TCGA	3 cut(s)	233, 626, 1153
TasI	AATT	9 cut(s)	111, 212, 358, 637, 849, 929, 1063, 1238, 1783
TatI	WGTACW	2 cut(s)	1462, 1486
TauI	GCSGC	3 cut(s)	296, 841, 1768
TfiI	GAWTC	9 cut(s)	235, 256, 284, 337, 406, 1128, 1222, 1843, 1877
Tru1I	TTAA	3 cut(s)	674, 932, 1382
Tru9I	TTAA	3 cut(s)	674, 932, 1382
TscAI	CASTG	2 cut(s)	931, 1828
TseFI	GTSAC	2 cut(s)	1260, 1689
TseI	GCWGC	8 cut(s)	349, 383, 620, 668, 820, 1112, 1388, 1799
Tsp45I	GTSAC	2 cut(s)	1260, 1689
TspDTI	ATGAA	7 cut(s)	227, 735, 851, 1050, 1194, 1219, 1835
TspGWI	ACGGA	1 cut(s)	1845
TspRI	CASTG	2 cut(s)	931, 1828
Van91I	CCANNNNNTGG	2 cut(s)	452, 944
VpaK11BI	GGWCC	3 cut(s)	542, 697, 1555
XapI	RAATTY	4 cut(s)	637, 849, 1063, 1783
XmnI	GAANNNNTTC	1 cut(s)	1863
XspI	CTAG	3 cut(s)	1196, 1304, 1709

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.