U1-like zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1210900.v1.1 MD07G1114400.v1.1 |
| prunus_persica | Prupe.2G137000_v2.0.a1 |
| pyrus_communis | pycom02g17390 pycom07g09930 pycom07g09940 |
| rosa_chinensis | RchiOBHm_Chr1g0349021 |
| rosa_laevigata | RLG00000028611 |
| rosa_multiflora | Rmu_sc0009855.1_g000008 Rmu_sc0015786.1_g000001 Rmu_sc0038026.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00306230 |
| rosa_rugosa | Rorug01G0199500 |
| rosa_samantha | Rh1AG217100 Rh1BG182600 Rh1CG201500 Rh1DG212600 |
| rosa_wichuraiana | Rw0G005390 Rw1G018460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 733, 919 |
| AccB1I | GGYRCC | 2 cut(s) | 781, 1915 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 686, 1016 |
| AccI | GTMKAC | 1 cut(s) | 670 |
| AccII | CGCG | 2 cut(s) | 341, 642 |
| AclWI | GGATC | 6 cut(s) | 338, 351, 1182, 1264, 1517, 1988 |
| AcoI | YGGCCR | 2 cut(s) | 655, 1402 |
| AcsI | RAATTY | 5 cut(s) | 117, 235, 418, 709, 1135 |
| AcuI | CTGAAG | 6 cut(s) | 744, 750, 1101, 1161, 1458, 1473 |
| AcyI | GRCGYC | 1 cut(s) | 1916 |
| AfaI | GTAC | 2 cut(s) | 723, 795 |
| AgsI | TTSAA | 9 cut(s) | 122, 395, 1204, 1436, 1459, 1658, 1784, 1829, 1874 |
| AjiI | CACGTC | 2 cut(s) | 653, 1196 |
| AjnI | CCWGG | 4 cut(s) | 304, 657, 772, 1156 |
| AluBI | AGCT | 9 cut(s) | 469, 740, 1145, 1187, 1645, 1723, 1739, 1982, 2015 |
| AluI | AGCT | 9 cut(s) | 469, 740, 1145, 1187, 1645, 1723, 1739, 1982, 2015 |
| Alw21I | GWGCWC | 1 cut(s) | 1566 |
| AlwI | GGATC | 6 cut(s) | 338, 351, 1182, 1264, 1517, 1988 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 719, 1157, 1607, 1739 |
| Ama87I | CYCGRG | 3 cut(s) | 347, 1188, 1646 |
| AoxI | GGCC | 7 cut(s) | 507, 566, 589, 655, 1402, 1530, 1539 |
| ApoI | RAATTY | 5 cut(s) | 117, 235, 418, 709, 1135 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1660, 1692 |
| AspLEI | GCGC | 3 cut(s) | 502, 1606, 1918 |
| AspS9I | GGNCC | 7 cut(s) | 310, 507, 567, 589, 1154, 1531, 1540 |
| AsuC2I | CCSGG | 3 cut(s) | 348, 349, 1171 |
| AsuHPI | GGTGA | 2 cut(s) | 1526, 1584 |
| AvaI | CYCGRG | 3 cut(s) | 347, 1188, 1646 |
| AvaII | GGWCC | 2 cut(s) | 310, 1154 |
| AxyI | CCTNAGG | 1 cut(s) | 1527 |
| BalI | TGGCCA | 2 cut(s) | 657, 1404 |
| BamHI | GGATCC | 1 cut(s) | 343 |
| BanI | GGYRCC | 2 cut(s) | 781, 1915 |
| BbsI | GAAGAC | 2 cut(s) | 39, 801 |
| Bbv12I | GWGCWC | 1 cut(s) | 1566 |
| BccI | CCATC | 5 cut(s) | 118, 285, 614, 1456, 1676 |
| BciT130I | CCWGG | 4 cut(s) | 306, 659, 774, 1158 |
| BcnI | CCSGG | 3 cut(s) | 348, 349, 1171 |
| BfaI | CTAG | 2 cut(s) | 612, 1379 |
| BfmI | CTRYAG | 2 cut(s) | 1149, 1614 |
| BfoI | RGCGCY | 2 cut(s) | 1607, 1919 |
| BfuAI | ACCTGC | 2 cut(s) | 733, 919 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 526, 1538 |
| BlpI | GCTNAGC | 1 cut(s) | 625 |
| Bme1390I | CCNGG | 7 cut(s) | 306, 348, 349, 659, 774, 1158, 1171 |
| Bme18I | GGWCC | 2 cut(s) | 310, 1154 |
| BmeT110I | CYCGRG | 3 cut(s) | 347, 1188, 1646 |
| BmgBI | CACGTC | 2 cut(s) | 653, 1196 |
| BmgT120I | GGNCC | 7 cut(s) | 310, 507, 567, 589, 1154, 1531, 1540 |
| BmrFI | CCNGG | 7 cut(s) | 306, 348, 349, 659, 774, 1158, 1171 |
| BmrI | ACTGGG | 2 cut(s) | 1137, 1770 |
| BmsI | GCATC | 6 cut(s) | 34, 484, 704, 725, 1619, 1970 |
| BmuI | ACTGGG | 2 cut(s) | 1137, 1770 |
| BpiI | GAAGAC | 2 cut(s) | 39, 801 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 496, 528 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 625 |
| BpuEI | CTTGAG | 2 cut(s) | 207, 908 |
| BpuMI | CCSGG | 3 cut(s) | 348, 349, 1171 |
| BsaHI | GRCGYC | 1 cut(s) | 1916 |
| BsaJI | CCNNGG | 9 cut(s) | 305, 347, 574, 604, 640, 658, 773, 1157, 1170 |
| Bse118I | RCCGGY | 1 cut(s) | 442 |
| Bse1I | ACTGG | 4 cut(s) | 1132, 1625, 1765, 1931 |
| Bse21I | CCTNAGG | 1 cut(s) | 1527 |
| Bse3DI | GCAATG | 1 cut(s) | 1733 |
| BseBI | CCWGG | 4 cut(s) | 306, 659, 774, 1158 |
| BseDI | CCNNGG | 9 cut(s) | 305, 347, 574, 604, 640, 658, 773, 1157, 1170 |
| BseGI | GGATG | 3 cut(s) | 298, 499, 1218 |
| BseMI | GCAATG | 1 cut(s) | 1733 |
| BseMII | CTCAG | 4 cut(s) | 639, 1541, 1967, 2004 |
| BseNI | ACTGG | 4 cut(s) | 1132, 1625, 1765, 1931 |
| BseRI | GAGGAG | 2 cut(s) | 822, 953 |
| BseYI | CCCAGC | 2 cut(s) | 1600, 1739 |
| BsgI | GTGCAG | 2 cut(s) | 441, 1752 |
| Bsh1236I | CGCG | 2 cut(s) | 341, 642 |
| BshFI | GGCC | 7 cut(s) | 509, 568, 591, 657, 1404, 1532, 1541 |
| BshNI | GGYRCC | 2 cut(s) | 781, 1915 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1566 |
| BsiHKCI | CYCGRG | 3 cut(s) | 347, 1188, 1646 |
| BsiSI | CCGG | 3 cut(s) | 348, 443, 1170 |
| BslFI | GGGAC | 4 cut(s) | 296, 663, 1206, 1236 |
| BsmFI | GGGAC | 4 cut(s) | 296, 663, 1206, 1236 |
| BsmI | GAATGC | 2 cut(s) | 373, 985 |
| BsnI | GGCC | 7 cut(s) | 509, 568, 591, 657, 1404, 1532, 1541 |
| BsoBI | CYCGRG | 3 cut(s) | 347, 1188, 1646 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1566 |
| Bsp143I | GATC | 8 cut(s) | 343, 397, 1114, 1174, 1256, 1265, 1522, 1993 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 625 |
| Bsp19I | CCATGG | 1 cut(s) | 604 |
| BspANI | GGCC | 7 cut(s) | 509, 568, 591, 657, 1404, 1532, 1541 |
| BspCNI | CTCAG | 4 cut(s) | 638, 1540, 1966, 2003 |
| BspFNI | CGCG | 2 cut(s) | 341, 642 |
| BspMAI | CTGCAG | 2 cut(s) | 1153, 1618 |
| BspMI | ACCTGC | 2 cut(s) | 733, 919 |
| BspPI | GGATC | 6 cut(s) | 338, 351, 1182, 1264, 1517, 1988 |
| BspQI | GCTCTTC | 1 cut(s) | 2046 |
| BspT107I | GGYRCC | 2 cut(s) | 781, 1915 |
| BsrDI | GCAATG | 1 cut(s) | 1733 |
| BsrFI | RCCGGY | 1 cut(s) | 442 |
| BsrI | ACTGG | 4 cut(s) | 1132, 1625, 1765, 1931 |
| BssAI | RCCGGY | 1 cut(s) | 442 |
| BssECI | CCNNGG | 9 cut(s) | 305, 347, 574, 604, 640, 658, 773, 1157, 1170 |
| BssMI | GATC | 8 cut(s) | 343, 397, 1114, 1174, 1256, 1265, 1522, 1993 |
| BssNI | GRCGYC | 1 cut(s) | 1916 |
| BssT1I | CCWWGG | 1 cut(s) | 604 |
| Bst2UI | CCWGG | 4 cut(s) | 306, 659, 774, 1158 |
| Bst4CI | ACNGT | 3 cut(s) | 684, 1409, 1504 |
| Bst6I | CTCTTC | 1 cut(s) | 2046 |
| BstACI | GRCGYC | 1 cut(s) | 1916 |
| BstC8I | GCNNGC | 4 cut(s) | 780, 1608, 1920, 1943 |
| BstDEI | CTNAG | 4 cut(s) | 625, 1527, 1953, 1990 |
| BstDSI | CCRYGG | 2 cut(s) | 604, 640 |
| BstEII | GGTNACC | 1 cut(s) | 599 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 729 |
| BstF5I | GGATG | 3 cut(s) | 298, 499, 1218 |
| BstFNI | CGCG | 2 cut(s) | 341, 642 |
| BstH2I | RGCGCY | 2 cut(s) | 1607, 1919 |
| BstHHI | GCGC | 3 cut(s) | 502, 1606, 1918 |
| BstKTI | GATC | 8 cut(s) | 346, 400, 1117, 1177, 1259, 1268, 1525, 1996 |
| BstMBI | GATC | 8 cut(s) | 343, 397, 1114, 1174, 1256, 1265, 1522, 1993 |
| BstNI | CCWGG | 4 cut(s) | 306, 659, 774, 1158 |
| BstPI | GGTNACC | 1 cut(s) | 599 |
| BstSCI | CCNGG | 7 cut(s) | 304, 346, 347, 657, 772, 1156, 1169 |
| BstSFI | CTRYAG | 2 cut(s) | 1149, 1614 |
| BstUI | CGCG | 2 cut(s) | 341, 642 |
| BstV2I | GAAGAC | 2 cut(s) | 39, 801 |
| BstX2I | RGATCY | 2 cut(s) | 343, 1993 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 665 |
| BstYI | RGATCY | 2 cut(s) | 343, 1993 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1527 |
| BsuRI | GGCC | 7 cut(s) | 509, 568, 591, 657, 1404, 1532, 1541 |
| BtgI | CCRYGG | 2 cut(s) | 604, 640 |
| BtrI | CACGTC | 2 cut(s) | 653, 1196 |
| BtsCI | GGATG | 3 cut(s) | 298, 499, 1218 |
| BtsIMutI | CAGTG | 3 cut(s) | 996, 1500, 1758 |
| BveI | ACCTGC | 2 cut(s) | 733, 919 |
| Cac8I | GCNNGC | 4 cut(s) | 780, 1608, 1920, 1943 |
| CaiI | CAGNNNCTG | 4 cut(s) | 719, 1157, 1607, 1739 |
| CfoI | GCGC | 3 cut(s) | 502, 1606, 1918 |
| Cfr10I | RCCGGY | 1 cut(s) | 442 |
| Cfr13I | GGNCC | 7 cut(s) | 310, 507, 567, 589, 1154, 1531, 1540 |
| Cfr42I | CCGCGG | 1 cut(s) | 643 |
| Cfr9I | CCCGGG | 1 cut(s) | 347 |
| CseI | GACGC | 1 cut(s) | 481 |
| Csp6I | GTAC | 2 cut(s) | 722, 794 |
| CviAII | CATG | 4 cut(s) | 383, 490, 605, 1400 |
| CviQI | GTAC | 2 cut(s) | 722, 794 |
| DdeI | CTNAG | 4 cut(s) | 625, 1527, 1953, 1990 |
| DinI | GGCGCC | 1 cut(s) | 1917 |
| DpnI | GATC | 8 cut(s) | 345, 399, 1116, 1176, 1258, 1267, 1524, 1995 |
| DpnII | GATC | 8 cut(s) | 343, 397, 1114, 1174, 1256, 1265, 1522, 1993 |
| EaeI | YGGCCR | 2 cut(s) | 655, 1402 |
| Eam1104I | CTCTTC | 1 cut(s) | 2046 |
| EarI | CTCTTC | 1 cut(s) | 2046 |
| Eco130I | CCWWGG | 1 cut(s) | 604 |
| Eco47I | GGWCC | 2 cut(s) | 310, 1154 |
| Eco57I | CTGAAG | 6 cut(s) | 744, 750, 1101, 1161, 1458, 1473 |
| Eco81I | CCTNAGG | 1 cut(s) | 1527 |
| Eco88I | CYCGRG | 3 cut(s) | 347, 1188, 1646 |
| Eco91I | GGTNACC | 1 cut(s) | 599 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 729 |
| EcoO109I | RGGNCCY | 4 cut(s) | 310, 567, 1154, 1531 |
| EcoO65I | GGTNACC | 1 cut(s) | 599 |
| EcoRI | GAATTC | 2 cut(s) | 117, 418 |
| EcoRII | CCWGG | 4 cut(s) | 304, 657, 772, 1156 |
| EcoT14I | CCWWGG | 1 cut(s) | 604 |
| EgeI | GGCGCC | 1 cut(s) | 1917 |
| EheI | GGCGCC | 1 cut(s) | 1917 |
| ErhI | CCWWGG | 1 cut(s) | 604 |
| FaeI | CATG | 4 cut(s) | 386, 493, 608, 1403 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1056, 1088, 1416, 1448 |
| FaqI | GGGAC | 4 cut(s) | 296, 663, 1206, 1236 |
| FatI | CATG | 4 cut(s) | 382, 489, 604, 1399 |
| FauI | CCCGC | 1 cut(s) | 327 |
| FauNDI | CATATG | 1 cut(s) | 103 |
| FblI | GTMKAC | 1 cut(s) | 670 |
| FokI | GGATG | 3 cut(s) | 285, 506, 1225 |
| FspBI | CTAG | 2 cut(s) | 612, 1379 |
| GlaI | GCGC | 3 cut(s) | 501, 1605, 1917 |
| GsaI | CCCAGC | 2 cut(s) | 1604, 1743 |
| HaeII | RGCGCY | 2 cut(s) | 1607, 1919 |
| HaeIII | GGCC | 7 cut(s) | 509, 568, 591, 657, 1404, 1532, 1541 |
| HapII | CCGG | 3 cut(s) | 348, 443, 1170 |
| HgaI | GACGC | 1 cut(s) | 481 |
| HhaI | GCGC | 3 cut(s) | 502, 1606, 1918 |
| Hin1I | GRCGYC | 1 cut(s) | 1916 |
| Hin1II | CATG | 4 cut(s) | 386, 493, 608, 1403 |
| Hin6I | GCGC | 3 cut(s) | 500, 1604, 1916 |
| HinP1I | GCGC | 3 cut(s) | 500, 1604, 1916 |
| HincII | GTYRAC | 2 cut(s) | 865, 1022 |
| HindII | GTYRAC | 2 cut(s) | 865, 1022 |
| HindIII | AAGCTT | 1 cut(s) | 1143 |
| HinfI | GANTC | 6 cut(s) | 295, 1297, 1334, 1654, 1927, 2039 |
| HpaII | CCGG | 3 cut(s) | 348, 443, 1170 |
| HphI | GGTGA | 2 cut(s) | 1526, 1584 |
| Hpy166II | GTNNAC | 4 cut(s) | 671, 851, 865, 1022 |
| Hpy188III | TCNNGA | 8 cut(s) | 29, 114, 224, 281, 612, 878, 1260, 1679 |
| Hpy8I | GTNNAC | 4 cut(s) | 671, 851, 865, 1022 |
| HpyAV | CCTTC | 4 cut(s) | 580, 725, 768, 1247 |
| HpyCH4III | ACNGT | 3 cut(s) | 684, 1409, 1504 |
| HpyCH4IV | ACGT | 5 cut(s) | 652, 1195, 1717, 1817, 1904 |
| HpyF3I | CTNAG | 4 cut(s) | 625, 1527, 1953, 1990 |
| HpySE526I | ACGT | 5 cut(s) | 652, 1195, 1717, 1817, 1904 |
| Hsp92I | GRCGYC | 1 cut(s) | 1916 |
| Hsp92II | CATG | 4 cut(s) | 386, 493, 608, 1403 |
| HspAI | GCGC | 3 cut(s) | 500, 1604, 1916 |
| KasI | GGCGCC | 1 cut(s) | 1915 |
| KflI | GGGWCCC | 1 cut(s) | 310 |
| KspI | CCGCGG | 1 cut(s) | 643 |
| Kzo9I | GATC | 8 cut(s) | 343, 397, 1114, 1174, 1256, 1265, 1522, 1993 |
| LguI | GCTCTTC | 1 cut(s) | 2046 |
| LmnI | GCTCC | 2 cut(s) | 1686, 1979 |
| LweI | GCATC | 6 cut(s) | 34, 484, 704, 725, 1619, 1970 |
| MaeI | CTAG | 2 cut(s) | 612, 1379 |
| MaeII | ACGT | 5 cut(s) | 652, 1195, 1717, 1817, 1904 |
| MaeIII | GTNAC | 4 cut(s) | 599, 1335, 1514, 1933 |
| MalI | GATC | 8 cut(s) | 345, 399, 1116, 1176, 1258, 1267, 1524, 1995 |
| MboI | GATC | 8 cut(s) | 343, 397, 1114, 1174, 1256, 1265, 1522, 1993 |
| MboII | GAAGA | 5 cut(s) | 44, 407, 801, 1275, 2063 |
| MfeI | CAATTG | 1 cut(s) | 1544 |
| MflI | RGATCY | 2 cut(s) | 343, 1993 |
| MhlI | GDGCHC | 1 cut(s) | 1566 |
| MlsI | TGGCCA | 2 cut(s) | 657, 1404 |
| MluNI | TGGCCA | 2 cut(s) | 657, 1404 |
| Mly113I | GGCGCC | 1 cut(s) | 1916 |
| MlyI | GAGTC | 2 cut(s) | 1343, 2048 |
| MmeI | TCCRAC | 1 cut(s) | 1609 |
| Mox20I | TGGCCA | 2 cut(s) | 657, 1404 |
| MscI | TGGCCA | 2 cut(s) | 657, 1404 |
| MseI | TTAA | 3 cut(s) | 746, 1004, 1389 |
| MslI | CAYNNNNRTG | 2 cut(s) | 900, 1362 |
| Msp20I | TGGCCA | 2 cut(s) | 657, 1404 |
| MspA1I | CMGCKG | 4 cut(s) | 469, 642, 1723, 1739 |
| MspI | CCGG | 3 cut(s) | 348, 443, 1170 |
| MspR9I | CCNGG | 7 cut(s) | 306, 348, 349, 659, 774, 1158, 1171 |
| MunI | CAATTG | 1 cut(s) | 1544 |
| Mva1269I | GAATGC | 2 cut(s) | 373, 985 |
| MvaI | CCWGG | 4 cut(s) | 306, 659, 774, 1158 |
| MvnI | CGCG | 2 cut(s) | 341, 642 |
| NarI | GGCGCC | 1 cut(s) | 1916 |
| NciI | CCSGG | 3 cut(s) | 348, 349, 1171 |
| NcoI | CCATGG | 1 cut(s) | 604 |
| NdeI | CATATG | 1 cut(s) | 103 |
| NdeII | GATC | 8 cut(s) | 343, 397, 1114, 1174, 1256, 1265, 1522, 1993 |
| NlaIII | CATG | 4 cut(s) | 386, 493, 608, 1403 |
| NmuCI | GTSAC | 3 cut(s) | 1335, 1514, 1933 |
| PaeR7I | CTCGAG | 1 cut(s) | 1646 |
| PciSI | GCTCTTC | 1 cut(s) | 2046 |
| PctI | GAATGC | 2 cut(s) | 373, 985 |
| PfeI | GAWTC | 4 cut(s) | 295, 1297, 1654, 1927 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 686, 1016 |
| PleI | GAGTC | 2 cut(s) | 1342, 2047 |
| PluTI | GGCGCC | 1 cut(s) | 1919 |
| PpsI | GAGTC | 2 cut(s) | 1342, 2047 |
| PpuMI | RGGWCCY | 2 cut(s) | 310, 1154 |
| Psp5II | RGGWCCY | 2 cut(s) | 310, 1154 |
| Psp6I | CCWGG | 4 cut(s) | 304, 657, 772, 1156 |
| PspEI | GGTNACC | 1 cut(s) | 599 |
| PspFI | CCCAGC | 2 cut(s) | 1600, 1739 |
| PspGI | CCWGG | 4 cut(s) | 304, 657, 772, 1156 |
| PspPI | GGNCC | 7 cut(s) | 310, 507, 567, 589, 1154, 1531, 1540 |
| PspPPI | RGGWCCY | 2 cut(s) | 310, 1154 |
| PspXI | VCTCGAGB | 1 cut(s) | 1646 |
| PstI | CTGCAG | 2 cut(s) | 1153, 1618 |
| PstNI | CAGNNNCTG | 4 cut(s) | 719, 1157, 1607, 1739 |
| PsuI | RGATCY | 2 cut(s) | 343, 1993 |
| PvuII | CAGCTG | 3 cut(s) | 469, 1723, 1739 |
| RsaI | GTAC | 2 cut(s) | 723, 795 |
| RsaNI | GTAC | 2 cut(s) | 722, 794 |
| RseI | CAYNNNNRTG | 2 cut(s) | 900, 1362 |
| SacII | CCGCGG | 1 cut(s) | 643 |
| SapI | GCTCTTC | 1 cut(s) | 2046 |
| SaqAI | TTAA | 3 cut(s) | 746, 1004, 1389 |
| Sau3AI | GATC | 8 cut(s) | 343, 397, 1114, 1174, 1256, 1265, 1522, 1993 |
| Sau96I | GGNCC | 7 cut(s) | 310, 507, 567, 589, 1154, 1531, 1540 |
| SchI | GAGTC | 2 cut(s) | 1343, 2048 |
| ScrFI | CCNGG | 7 cut(s) | 306, 348, 349, 659, 774, 1158, 1171 |
| SduI | GDGCHC | 1 cut(s) | 1566 |
| SfaNI | GCATC | 6 cut(s) | 34, 484, 704, 725, 1619, 1970 |
| SfcI | CTRYAG | 2 cut(s) | 1149, 1614 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1538 |
| SfoI | GGCGCC | 1 cut(s) | 1917 |
| Sfr274I | CTCGAG | 1 cut(s) | 1646 |
| Sfr303I | CCGCGG | 1 cut(s) | 643 |
| SgrBI | CCGCGG | 1 cut(s) | 643 |
| SinI | GGWCC | 2 cut(s) | 310, 1154 |
| SlaI | CTCGAG | 1 cut(s) | 1646 |
| SmaI | CCCGGG | 1 cut(s) | 349 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 900, 1362 |
| SmlI | CTYRAG | 3 cut(s) | 222, 887, 1646 |
| SmoI | CTYRAG | 3 cut(s) | 222, 887, 1646 |
| SspDI | GGCGCC | 1 cut(s) | 1915 |
| SspI | AATATT | 1 cut(s) | 209 |
| SspMI | CTAG | 2 cut(s) | 612, 1379 |
| StyD4I | CCNGG | 7 cut(s) | 304, 346, 347, 657, 772, 1156, 1169 |
| StyI | CCWWGG | 1 cut(s) | 604 |
| TaaI | ACNGT | 3 cut(s) | 684, 1409, 1504 |
| TaiI | ACGT | 5 cut(s) | 655, 1198, 1720, 1820, 1907 |
| TaqI | TCGA | 3 cut(s) | 293, 1350, 1647 |
| TauI | GCSGC | 5 cut(s) | 449, 500, 757, 1466, 1496 |
| TfiI | GAWTC | 4 cut(s) | 295, 1297, 1654, 1927 |
| Tru1I | TTAA | 3 cut(s) | 746, 1004, 1389 |
| Tru9I | TTAA | 3 cut(s) | 746, 1004, 1389 |
| TscAI | CASTG | 3 cut(s) | 1003, 1507, 1765 |
| TseFI | GTSAC | 3 cut(s) | 1335, 1514, 1933 |
| Tsp45I | GTSAC | 3 cut(s) | 1335, 1514, 1933 |
| TspDTI | ATGAA | 7 cut(s) | 195, 287, 431, 807, 1122, 1266, 1388 |
| TspMI | CCCGGG | 1 cut(s) | 347 |
| TspRI | CASTG | 3 cut(s) | 1003, 1507, 1765 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 686, 1016 |
| VpaK11BI | GGWCC | 2 cut(s) | 310, 1154 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 729 |
| XapI | RAATTY | 5 cut(s) | 117, 235, 418, 709, 1135 |
| XbaI | TCTAGA | 1 cut(s) | 611 |
| XhoI | CTCGAG | 1 cut(s) | 1646 |
| XmaI | CCCGGG | 1 cut(s) | 347 |
| XmiI | GTMKAC | 1 cut(s) | 670 |
| XspI | CTAG | 2 cut(s) | 612, 1379 |