Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0012660

Physical Location & Seq

Genomic Coordinates Reverse (-)

25019335 .. 25024503

Gene Structure 5169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028611

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGATTACACCTACACACAAACCCCTCAACCTGACCCTAACCAATACCACCACCAATTCCAACCTCAACCTCAACCTCAACCTCAACAACCACCACCACCATATGACCCTTCAACAATTCAACCCTTTGATCCTCAGTCATACTATTACTCCTATGATCCAAACCACCACTACCAATATTACAATCCCACATCCCAGGATTACACGACTAACCCCCAATTGTATCAAGAACCCACTTCGATTCATCCTCCCGGCGTCCCGATTCCGGCGCCTCAGCCGCAGACGGCGGATTCCGACACGGCCCATTTGCAGAATGCGTATTATGGACCTGGGGTTGTGGAGAATCAGCACCAGCAGCCAATCAGTTCGGGTTCGGGTCAGGCATCGGTTTCGGAGGTAACCCAGATTCCGGGGAAGGTGGAGGTGGCGCAGGTAGCCTCGCAACCACGGATTGGGCAAACTCCATATAGAGGTGGAGGAAGGAGGGGCAATAGGCCCTTCCGAGGGGGTGGTCGGGGCCATTTGGGTTACCATGGTCATGGACCAGATGGCTCAGCACCACCTTTGCATGGTAGGGGACGTGGCCAGGGTGGTGGTAGGCACTTTCAACTGTATGGTGCTGCATCGAGCAATCCAAATTCAGCATCTGTACCAGCTGAAGGCGTAGCTGCTTTAAAGCAGTCACCTTCAGCATTGGTCCCTTTGCAGGCACCATTACCTGTACCAACACAAGTGTCTTCTGCTTCATTCTGGCGACCTCCTCGTATGGCTTGGTGTGAACTTTGTAGGGTTGACTGCAACACTCTTGAAACCCTTGAGCAGCATAAAAATGGAAAGCGGCATAAAAAAATTCTGCAGGTTCATGAGGAGTTGCAGAAACACAACAAAGTGAATACTGAACAGCAGAATGCACAAATGCCCAACACTGAATTAAAACCAGAAGTTGGTCAGACTGAGAAAGTTGAGGGATCTGAGGAAAAGCAACCCTCAGAAGAAAAACTGACCTCTGAAGAAGTTACTGATGATAATAGAAATGAAACAGATCAAAGAGAAGCAGTGGGAAATTCTGAAGCTTCTGAAGAACCTGAGAACAAGTCCAGGGATCACTTTGCAGCTCGGGGACGTGGATTCAAGCGTAGGATGCGAGGGGGTCGAGGGGGTAAGTATATGAGGACATATGAAGGATCAAGAAGACTAGTTGAGCCTCCTAAACCCAAAGTGATTCCTTTCATATGTGAATTGTGCAATGTCAAGTGTGAGTCACAGGTGGTTTTTGATAGTCATTTGAGTGGTAAAAAGCACCTAGCAACCCTCAAGAGGTTTCAAAGCCACCGTGCTTTGTATGGAGAACAGGGACTTCAAGCACTTTACCCACCTAACTTAACTGCTGCGTCAACTTCAGTCACCCCTCATGCAGAGCAAGCCCCCCCTCATGTAGAGCAAGTCGCCCCTCCTCATGTACAGCAAGTTAGCCCTCCTCATGTACAGCAAGGTGTCATTGATCCTCAGGTCTTCTTGGCCCAAGTCCAGCAAGGTGGCAATGATCCTGAGGTCCTGTTGGGCAAACTACTGATGTCTTATATGCTCTCTAAAACCCAAGCACAAGAAATAGCACCTGCTCCGGGGCCTGCATCTACCGTGGCTACAGCTCCAGGAACGAATATTGAAACTCAAAATCAACTGCAGTCACATATCCAAGGATTACTAGCGATGTGTCAAAATGGGTTCCAAAGTGCAGTTATGGTGGGCGCCAAAAGTCAGCCACAATCTGGCACCTTGAATTCTGAAGCCCCATCAGCCGAAAACAGAGACACAAACACTGGGAATGGAACTCTGCAGATTCATGCAAAGGAGGAAAGTGTTCCTATAAATGATTCAGTTGTGGCGCCAGCAGTGAACGCAGGCTCAAGCAAGCAAGTTTCTGAAAAAGCTTCACTTGAAGAATGTGAAGTTGTTGCCTCGGCCCCAGTTCAGCCAGAACCTGAATTCCAAATGCAAGGGCCAGAGTCCAAGAAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-met

Protein Analysis

674

Amino Acids

73.4

Weight (kDa)

6.24

Isoelectric Point (pI)

60.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	410 - 434	1.9e-08	Zinc-finger of C2H2 type
zf-C2H2_jaz	PF12171	410 - 434	2.7e-06	Zinc-finger double-stranded RNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012660)

Species	Orthologous Gene IDs
malus_domestica	MD02G1210900.v1.1 MD07G1114400.v1.1
prunus_persica	Prupe.2G137000_v2.0.a1
pyrus_communis	pycom02g17390 pycom07g09930 pycom07g09940
rosa_chinensis	RchiOBHm_Chr1g0349021
rosa_laevigata	RLG00000028611
rosa_multiflora	Rmu_sc0009855.1_g000008 Rmu_sc0015786.1_g000001 Rmu_sc0038026.1_g000001
rosa_roxburghii	Rroxscaffold_4G00306230
rosa_rugosa	Rorug01G0199500
rosa_samantha	Rh1AG217100 Rh1BG182600 Rh1CG201500 Rh1DG212600
rosa_wichuraiana	Rw0G005390 Rw1G018460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1624
Acc36I	ACCTGC	3 cut(s)	421, 847, 1624
AccB1I	GGYRCC	5 cut(s)	268, 709, 1748, 1772, 1885
AccB7I	CCANNNNNTGG	3 cut(s)	452, 944, 1769
AciI	CCGC	3 cut(s)	278, 287, 838
AclWI	GGATC	7 cut(s)	125, 152, 976, 1110, 1192, 1496, 1538
AcoI	YGGCCR	1 cut(s)	583
AcsI	RAATTY	5 cut(s)	637, 849, 1063, 1780, 1985
AcuI	CTGAAG	7 cut(s)	672, 678, 1029, 1089, 1098, 1383, 1806
AcyI	GRCGYC	4 cut(s)	255, 269, 1749, 1886
AfaI	GTAC	4 cut(s)	651, 723, 1461, 1485
AhlI	ACTAGT	1 cut(s)	1195
AjiI	CACGTC	2 cut(s)	581, 1124
AjnI	CCWGG	5 cut(s)	195, 328, 585, 1097, 1651
AloI	GAACNNNNNNTCC	2 cut(s)	1971, 2003
AluBI	AGCT	6 cut(s)	656, 668, 1073, 1115, 1649, 1931
AluI	AGCT	6 cut(s)	656, 668, 1073, 1115, 1649, 1931
Alw26I	GTCTC	1 cut(s)	1803
AlwI	GGATC	7 cut(s)	125, 152, 976, 1110, 1192, 1496, 1538
AlwNI	CAGNNNCTG	2 cut(s)	647, 1982
Ama87I	CYCGRG	1 cut(s)	1116
AoxI	GGCC	8 cut(s)	300, 494, 517, 583, 1518, 1625, 1962, 2000
ApeKI	GCWGC	6 cut(s)	355, 620, 668, 820, 1112, 1388
ApoI	RAATTY	5 cut(s)	637, 849, 1063, 1780, 1985
Asp700I	GAANNNNTTC	1 cut(s)	1860
AspLEI	GCGC	4 cut(s)	271, 430, 1751, 1888
AsuC2I	CCSGG	3 cut(s)	252, 411, 1623
AsuHPI	GGTGA	2 cut(s)	675, 1396
AvaI	CYCGRG	1 cut(s)	1116
AvaII	GGWCC	4 cut(s)	326, 542, 697, 1552
AxyI	CCTNAGG	2 cut(s)	1506, 1548
BalI	TGGCCA	1 cut(s)	585
BanI	GGYRCC	5 cut(s)	268, 709, 1748, 1772, 1885
BbsI	GAAGAC	3 cut(s)	729, 1198, 1504
BbvCI	CCTCAGC	1 cut(s)	273
BbvI	GCAGC	6 cut(s)	367, 607, 655, 832, 1124, 1375
BccI	CCATC	2 cut(s)	542, 1801
BceAI	ACGGC	2 cut(s)	300, 315
BcgI	CGANNNNNNTGC	2 cut(s)	372, 406
BciT130I	CCWGG	5 cut(s)	197, 330, 587, 1099, 1653
BcnI	CCSGG	3 cut(s)	252, 411, 1623
BcoDI	GTCTC	1 cut(s)	1803
BcuI	ACTAGT	1 cut(s)	1195
BfaI	CTAG	3 cut(s)	1196, 1304, 1706
BfmI	CTRYAG	4 cut(s)	854, 1644, 1682, 1835
BfoI	RGCGCY	3 cut(s)	272, 1752, 1889
BfuAI	ACCTGC	3 cut(s)	421, 847, 1624
BisI	GCNGC	8 cut(s)	278, 356, 621, 669, 821, 839, 1113, 1389
BlpI	GCTNAGC	1 cut(s)	553
BlsI	GCNGC	8 cut(s)	279, 357, 622, 670, 822, 840, 1114, 1390
Bme1390I	CCNGG	8 cut(s)	197, 252, 330, 411, 587, 1099, 1623, 1653
Bme18I	GGWCC	4 cut(s)	326, 542, 697, 1552
BmeT110I	CYCGRG	1 cut(s)	1116
BmgBI	CACGTC	2 cut(s)	581, 1124
BmrFI	CCNGG	8 cut(s)	197, 252, 330, 411, 587, 1099, 1623, 1653
BmrI	ACTGGG	2 cut(s)	1830, 1961
BmsI	GCATC	5 cut(s)	392, 632, 653, 1131, 1640
BmuI	ACTGGG	2 cut(s)	1830, 1961
BpiI	GAAGAC	3 cut(s)	729, 1198, 1504
BpmI	CTGGAG	1 cut(s)	1635
Bpu10I	CCTNAGC	1 cut(s)	273
Bpu1102I	GCTNAGC	1 cut(s)	553
BpuEI	CTTGAG	3 cut(s)	836, 1298, 1891
BpuMI	CCSGG	3 cut(s)	252, 411, 1623
BsaHI	GRCGYC	4 cut(s)	255, 269, 1749, 1886
BsaXI	ACNNNNNCTCC	2 cut(s)	134, 164
Bse1I	ACTGG	2 cut(s)	1825, 1967
Bse21I	CCTNAGG	2 cut(s)	1506, 1548
Bse3DI	GCAATG	2 cut(s)	1252, 1546
BseBI	CCWGG	5 cut(s)	197, 330, 587, 1099, 1653
BseGI	GGATG	3 cut(s)	191, 244, 1146
BseMI	GCAATG	2 cut(s)	1252, 1546
BseMII	CTCAG	9 cut(s)	149, 287, 567, 945, 963, 1002, 1077, 1520, 1539
BseNI	ACTGG	2 cut(s)	1825, 1967
BseRI	GAGGAG	4 cut(s)	750, 881, 1443, 1467
BseXI	GCAGC	6 cut(s)	367, 607, 655, 832, 1124, 1375
BsgI	GTGCAG	1 cut(s)	1755
BshFI	GGCC	8 cut(s)	302, 496, 519, 585, 1520, 1627, 1964, 2002
BshNI	GGYRCC	5 cut(s)	268, 709, 1748, 1772, 1885
BsiHKCI	CYCGRG	1 cut(s)	1116
BsiSI	CCGG	4 cut(s)	252, 266, 410, 1622
BslFI	GGGAC	5 cut(s)	242, 591, 683, 1134, 1368
BsmAI	GTCTC	1 cut(s)	1803
BsmFI	GGGAC	5 cut(s)	242, 591, 683, 1134, 1368
BsmI	GAATGC	2 cut(s)	319, 913
BsnI	GGCC	8 cut(s)	302, 496, 519, 585, 1520, 1627, 1964, 2002
BsoBI	CYCGRG	1 cut(s)	1116
Bsp1407I	TGTACA	2 cut(s)	1459, 1483
Bsp143I	GATC	8 cut(s)	130, 157, 968, 1042, 1102, 1184, 1501, 1543
Bsp1720I	GCTNAGC	1 cut(s)	553
Bsp19I	CCATGG	1 cut(s)	532
BspACI	CCGC	3 cut(s)	278, 287, 838
BspANI	GGCC	8 cut(s)	302, 496, 519, 585, 1520, 1627, 1964, 2002
BspCNI	CTCAG	9 cut(s)	148, 286, 566, 946, 964, 1001, 1078, 1519, 1540
BspHI	TCATGA	1 cut(s)	862
BspMAI	CTGCAG	3 cut(s)	858, 1686, 1839
BspMI	ACCTGC	3 cut(s)	421, 847, 1624
BspPI	GGATC	7 cut(s)	125, 152, 976, 1110, 1192, 1496, 1538
BspT107I	GGYRCC	5 cut(s)	268, 709, 1748, 1772, 1885
BsrDI	GCAATG	2 cut(s)	1252, 1546
BsrGI	TGTACA	2 cut(s)	1459, 1483
BsrI	ACTGG	2 cut(s)	1825, 1967
BssMI	GATC	8 cut(s)	130, 157, 968, 1042, 1102, 1184, 1501, 1543
BssNI	GRCGYC	4 cut(s)	255, 269, 1749, 1886
BssT1I	CCWWGG	2 cut(s)	532, 1696
Bst2UI	CCWGG	5 cut(s)	197, 330, 587, 1099, 1653
Bst4CI	ACNGT	3 cut(s)	612, 1334, 1639
BstACI	GRCGYC	4 cut(s)	255, 269, 1749, 1886
BstAUI	TGTACA	2 cut(s)	1459, 1483
BstC8I	GCNNGC	6 cut(s)	708, 1422, 1629, 1890, 1903, 1913
BstDEI	CTNAG	9 cut(s)	135, 273, 553, 954, 972, 988, 1086, 1506, 1548
BstDSI	CCRYGG	3 cut(s)	446, 532, 1638
BstEII	GGTNACC	2 cut(s)	397, 527
BstF5I	GGATG	3 cut(s)	191, 244, 1146
BstH2I	RGCGCY	3 cut(s)	272, 1752, 1889
BstHHI	GCGC	4 cut(s)	271, 430, 1751, 1888
BstKTI	GATC	8 cut(s)	133, 160, 971, 1045, 1105, 1187, 1504, 1546
BstMAI	GTCTC	1 cut(s)	1803
BstMBI	GATC	8 cut(s)	130, 157, 968, 1042, 1102, 1184, 1501, 1543
BstMWI	GCNNNNNNNGC	7 cut(s)	277, 355, 434, 1141, 1421, 1796, 1898
BstNI	CCWGG	5 cut(s)	197, 330, 587, 1099, 1653
BstPI	GGTNACC	2 cut(s)	397, 527
BstSCI	CCNGG	8 cut(s)	195, 250, 328, 409, 585, 1097, 1621, 1651
BstSFI	CTRYAG	4 cut(s)	854, 1644, 1682, 1835
BstV1I	GCAGC	6 cut(s)	367, 607, 655, 832, 1124, 1375
BstV2I	GAAGAC	3 cut(s)	729, 1198, 1504
BstX2I	RGATCY	1 cut(s)	968
BstXI	CCANNNNNNTGG	3 cut(s)	539, 593, 1535
BstYI	RGATCY	1 cut(s)	968
Bsu36I	CCTNAGG	2 cut(s)	1506, 1548
BsuRI	GGCC	8 cut(s)	302, 496, 519, 585, 1520, 1627, 1964, 2002
BtgI	CCRYGG	3 cut(s)	446, 532, 1638
BtgZI	GCGATG	1 cut(s)	1724
BtrI	CACGTC	2 cut(s)	581, 1124
BtsCI	GGATG	3 cut(s)	191, 244, 1146
BtsI	GCAGTG	2 cut(s)	1062, 1899
BtsIMutI	CAGTG	4 cut(s)	924, 1062, 1818, 1899
BveI	ACCTGC	3 cut(s)	421, 847, 1624
Cac8I	GCNNGC	6 cut(s)	708, 1422, 1629, 1890, 1903, 1913
CaiI	CAGNNNCTG	2 cut(s)	647, 1982
CciI	TCATGA	1 cut(s)	862
CfoI	GCGC	4 cut(s)	271, 430, 1751, 1888
CseI	GACGC	2 cut(s)	244, 1380
Csp6I	GTAC	4 cut(s)	650, 722, 1460, 1484
CviAII	CATG	9 cut(s)	533, 539, 569, 863, 1412, 1433, 1457, 1481, 1844
CviQI	GTAC	4 cut(s)	650, 722, 1460, 1484
DdeI	CTNAG	9 cut(s)	135, 273, 553, 954, 972, 988, 1086, 1506, 1548
DinI	GGCGCC	3 cut(s)	270, 1750, 1887
DpnI	GATC	8 cut(s)	132, 159, 970, 1044, 1104, 1186, 1503, 1545
DpnII	GATC	8 cut(s)	130, 157, 968, 1042, 1102, 1184, 1501, 1543
DraI	TTTAAA	1 cut(s)	675
EaeI	YGGCCR	1 cut(s)	583
EciI	GGCGGA	1 cut(s)	302
Eco130I	CCWWGG	2 cut(s)	532, 1696
Eco47I	GGWCC	4 cut(s)	326, 542, 697, 1552
Eco57I	CTGAAG	7 cut(s)	672, 678, 1029, 1089, 1098, 1383, 1806
Eco81I	CCTNAGG	2 cut(s)	1506, 1548
Eco88I	CYCGRG	1 cut(s)	1116
Eco91I	GGTNACC	2 cut(s)	397, 527
EcoO109I	RGGNCCY	3 cut(s)	495, 1552, 1625
EcoO65I	GGTNACC	2 cut(s)	397, 527
EcoRI	GAATTC	2 cut(s)	1780, 1985
EcoRII	CCWGG	5 cut(s)	195, 328, 585, 1097, 1651
EcoT14I	CCWWGG	2 cut(s)	532, 1696
EgeI	GGCGCC	3 cut(s)	270, 1750, 1887
EheI	GGCGCC	3 cut(s)	270, 1750, 1887
ErhI	CCWWGG	2 cut(s)	532, 1696
FaeI	CATG	9 cut(s)	536, 542, 572, 866, 1415, 1436, 1460, 1484, 1847
FalI	AAGNNNNNCTT	2 cut(s)	1920, 1952
FaqI	GGGAC	5 cut(s)	242, 591, 683, 1134, 1368
FatI	CATG	9 cut(s)	532, 538, 568, 862, 1411, 1432, 1456, 1480, 1843
FauNDI	CATATG	3 cut(s)	103, 1177, 1232
Fnu4HI	GCNGC	8 cut(s)	278, 356, 621, 669, 821, 839, 1113, 1389
FokI	GGATG	3 cut(s)	178, 231, 1153
Fsp4HI	GCNGC	8 cut(s)	278, 356, 621, 669, 821, 839, 1113, 1389
FspBI	CTAG	3 cut(s)	1196, 1304, 1706
GlaI	GCGC	4 cut(s)	270, 429, 1750, 1887
GluI	GCNGC	8 cut(s)	278, 356, 621, 669, 821, 839, 1113, 1389
GsuI	CTGGAG	1 cut(s)	1635
HaeII	RGCGCY	3 cut(s)	272, 1752, 1889
HaeIII	GGCC	8 cut(s)	302, 496, 519, 585, 1520, 1627, 1964, 2002
HapII	CCGG	4 cut(s)	252, 266, 410, 1622
HgaI	GACGC	2 cut(s)	244, 1380
HhaI	GCGC	4 cut(s)	271, 430, 1751, 1888
Hin1I	GRCGYC	4 cut(s)	255, 269, 1749, 1886
Hin1II	CATG	9 cut(s)	536, 542, 572, 866, 1415, 1436, 1460, 1484, 1847
Hin6I	GCGC	4 cut(s)	269, 428, 1749, 1886
HinP1I	GCGC	4 cut(s)	269, 428, 1749, 1886
HincII	GTYRAC	2 cut(s)	793, 1395
HindII	GTYRAC	2 cut(s)	793, 1395
HindIII	AAGCTT	2 cut(s)	1071, 1929
HpaII	CCGG	4 cut(s)	252, 266, 410, 1622
HphI	GGTGA	2 cut(s)	675, 1396
Hpy166II	GTNNAC	4 cut(s)	779, 793, 1395, 1897
Hpy188III	TCNNGA	7 cut(s)	227, 259, 806, 863, 1188, 1315, 1547
Hpy8I	GTNNAC	4 cut(s)	779, 793, 1395, 1897
HpyAV	CCTTC	7 cut(s)	120, 409, 474, 508, 653, 696, 1175
HpyCH4III	ACNGT	3 cut(s)	612, 1334, 1639
HpyCH4IV	ACGT	2 cut(s)	580, 1123
HpyF10VI	GCNNNNNNNGC	7 cut(s)	277, 355, 434, 1141, 1421, 1796, 1898
HpyF3I	CTNAG	9 cut(s)	135, 273, 553, 954, 972, 988, 1086, 1506, 1548
HpySE526I	ACGT	2 cut(s)	580, 1123
Hsp92I	GRCGYC	4 cut(s)	255, 269, 1749, 1886
Hsp92II	CATG	9 cut(s)	536, 542, 572, 866, 1415, 1436, 1460, 1484, 1847
HspAI	GCGC	4 cut(s)	269, 428, 1749, 1886
KasI	GGCGCC	3 cut(s)	268, 1748, 1885
Kzo9I	GATC	8 cut(s)	130, 157, 968, 1042, 1102, 1184, 1501, 1543
LmnI	GCTCC	2 cut(s)	1624, 1654
Lsp1109I	GCAGC	6 cut(s)	367, 607, 655, 832, 1124, 1375
LweI	GCATC	5 cut(s)	392, 632, 653, 1131, 1640
MaeI	CTAG	3 cut(s)	1196, 1304, 1706
MaeII	ACGT	2 cut(s)	580, 1123
MaeIII	GTNAC	7 cut(s)	397, 527, 681, 1015, 1260, 1402, 1686
MalI	GATC	8 cut(s)	132, 159, 970, 1044, 1104, 1186, 1503, 1545
MboI	GATC	8 cut(s)	130, 157, 968, 1042, 1102, 1184, 1501, 1543
MboII	GAAGA	7 cut(s)	729, 1004, 1022, 1091, 1203, 1504, 1952
MfeI	CAATTG	1 cut(s)	218
MflI	RGATCY	1 cut(s)	968
MlsI	TGGCCA	1 cut(s)	585
MluNI	TGGCCA	1 cut(s)	585
Mly113I	GGCGCC	3 cut(s)	269, 1749, 1886
MlyI	GAGTC	2 cut(s)	1268, 2015
MmeI	TCCRAC	2 cut(s)	85, 318
Mox20I	TGGCCA	1 cut(s)	585
MroXI	GAANNNNTTC	1 cut(s)	1860
MscI	TGGCCA	1 cut(s)	585
MseI	TTAA	3 cut(s)	674, 932, 1382
MslI	CAYNNNNRTG	3 cut(s)	537, 828, 1287
Msp20I	TGGCCA	1 cut(s)	585
MspA1I	CMGCKG	1 cut(s)	656
MspI	CCGG	4 cut(s)	252, 266, 410, 1622
MspR9I	CCNGG	8 cut(s)	197, 252, 330, 411, 587, 1099, 1623, 1653
MunI	CAATTG	1 cut(s)	218
Mva1269I	GAATGC	2 cut(s)	319, 913
MvaI	CCWGG	5 cut(s)	197, 330, 587, 1099, 1653
MwoI	GCNNNNNNNGC	7 cut(s)	277, 355, 434, 1141, 1421, 1796, 1898
NarI	GGCGCC	3 cut(s)	269, 1749, 1886
NciI	CCSGG	3 cut(s)	252, 411, 1623
NcoI	CCATGG	1 cut(s)	532
NdeI	CATATG	3 cut(s)	103, 1177, 1232
NdeII	GATC	8 cut(s)	130, 157, 968, 1042, 1102, 1184, 1501, 1543
NlaIII	CATG	9 cut(s)	536, 542, 572, 866, 1415, 1436, 1460, 1484, 1847
NmeAIII	GCCGAG	1 cut(s)	1940
NmuCI	GTSAC	4 cut(s)	681, 1260, 1402, 1686
PagI	TCATGA	1 cut(s)	862
PaqCI	CACCTGC	1 cut(s)	1624
PctI	GAATGC	2 cut(s)	319, 913
PdmI	GAANNNNTTC	1 cut(s)	1860
PfeI	GAWTC	9 cut(s)	241, 262, 290, 343, 406, 1128, 1222, 1840, 1874
PflMI	CCANNNNNTGG	3 cut(s)	452, 944, 1769
PfoI	TCCNGGA	1 cut(s)	1651
PkrI	GCNGC	8 cut(s)	279, 357, 622, 670, 822, 840, 1114, 1390
PleI	GAGTC	2 cut(s)	1267, 2014
PluTI	GGCGCC	3 cut(s)	272, 1752, 1889
PpsI	GAGTC	2 cut(s)	1267, 2014
PpuMI	RGGWCCY	1 cut(s)	1552
Psp5II	RGGWCCY	1 cut(s)	1552
Psp6I	CCWGG	5 cut(s)	195, 328, 585, 1097, 1651
PspEI	GGTNACC	2 cut(s)	397, 527
PspGI	CCWGG	5 cut(s)	195, 328, 585, 1097, 1651
PspPPI	RGGWCCY	1 cut(s)	1552
PstI	CTGCAG	3 cut(s)	858, 1686, 1839
PstNI	CAGNNNCTG	2 cut(s)	647, 1982
PsuI	RGATCY	1 cut(s)	968
PvuII	CAGCTG	1 cut(s)	656
RsaI	GTAC	4 cut(s)	651, 723, 1461, 1485
RsaNI	GTAC	4 cut(s)	650, 722, 1460, 1484
RseI	CAYNNNNRTG	3 cut(s)	537, 828, 1287
SaqAI	TTAA	3 cut(s)	674, 932, 1382
SatI	GCNGC	8 cut(s)	278, 356, 621, 669, 821, 839, 1113, 1389
Sau3AI	GATC	8 cut(s)	130, 157, 968, 1042, 1102, 1184, 1501, 1543
SchI	GAGTC	2 cut(s)	1268, 2015
ScrFI	CCNGG	8 cut(s)	197, 252, 330, 411, 587, 1099, 1623, 1653
SfaNI	GCATC	5 cut(s)	392, 632, 653, 1131, 1640
SfcI	CTRYAG	4 cut(s)	854, 1644, 1682, 1835
SfoI	GGCGCC	3 cut(s)	270, 1750, 1887
SinI	GGWCC	4 cut(s)	326, 542, 697, 1552
SmiMI	CAYNNNNRTG	3 cut(s)	537, 828, 1287
SmlI	CTYRAG	3 cut(s)	815, 1313, 1906
SmoI	CTYRAG	3 cut(s)	815, 1313, 1906
SpeI	ACTAGT	1 cut(s)	1195
SsiI	CCGC	3 cut(s)	278, 287, 838
SspDI	GGCGCC	3 cut(s)	268, 1748, 1885
SspI	AATATT	2 cut(s)	179, 1663
SspMI	CTAG	3 cut(s)	1196, 1304, 1706
StyD4I	CCNGG	8 cut(s)	195, 250, 328, 409, 585, 1097, 1621, 1651
StyI	CCWWGG	2 cut(s)	532, 1696
TaaI	ACNGT	3 cut(s)	612, 1334, 1639
TaiI	ACGT	2 cut(s)	583, 1126
TaqI	TCGA	3 cut(s)	239, 626, 1153
TatI	WGTACW	2 cut(s)	1459, 1483
TauI	GCSGC	2 cut(s)	280, 841
TfiI	GAWTC	9 cut(s)	241, 262, 290, 343, 406, 1128, 1222, 1840, 1874
Tru1I	TTAA	3 cut(s)	674, 932, 1382
Tru9I	TTAA	3 cut(s)	674, 932, 1382
TscAI	CASTG	4 cut(s)	931, 1062, 1825, 1899
TseFI	GTSAC	4 cut(s)	681, 1260, 1402, 1686
TseI	GCWGC	6 cut(s)	355, 620, 668, 820, 1112, 1388
Tsp45I	GTSAC	4 cut(s)	681, 1260, 1402, 1686
TspDTI	ATGAA	7 cut(s)	233, 735, 851, 1050, 1194, 1219, 1832
TspGWI	ACGGA	1 cut(s)	463
TspRI	CASTG	4 cut(s)	931, 1062, 1825, 1899
Van91I	CCANNNNNTGG	3 cut(s)	452, 944, 1769
VpaK11BI	GGWCC	4 cut(s)	326, 542, 697, 1552
XapI	RAATTY	5 cut(s)	637, 849, 1063, 1780, 1985
XmnI	GAANNNNTTC	1 cut(s)	1860
XspI	CTAG	3 cut(s)	1196, 1304, 1706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.