Rorug01G0199500

U1-like zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0012660
Physical Location & Seq
Forward (+)
27893425 .. 27896575
3151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0199500.1

Sequence Viewer

Length: 3132 bp
ATGGGGTTATCATCTCTATGCTTAATAACTGTGTCCATCTATATCCTTTCAACAATTGTGTTGTTCCATCTTATGGTGGCCAGCTCTTTGGAGTCATTTACTCCTACTTGCCATGATGATGAGATCTCTGCCTTGCTGCAATTCAAGCAAAGCTTTGTCATCAACAAAAGTGCTTCAGTTTATGATGGTGCTTATCCAAAGATTTCTTCATGGAAATCTGCAGGGGATCAAAACAGCAGTTGTTGCTCATGGGATGGAGTCGAGTGTGATGTGAAGACAGGTCATGTGATTGGTCTTGATCTTAGTAGCAGCTATCTCTATGGCTCTTTCAGCTCCAACAACACCTTATTCAGTCTTGTTCATCTTCAGCGTCTGAACCTTGCTGATAATCACTTCAATTACTCTCAAATTCCTACTAGCATTAGGAACTTTCCAAGGCTCAGGTATCTCAATCTCTCTTACTCTGTTTTTTCTGGTCAAGTCCCATCTGAAGTTTCACAACTCTCTAAGTTGTCTTCCCTCGATCTATCTCGCAATGATATGCTTTCCAATGAAGAATTTTTAAGAAGCCTAGCTCAAAATTTAACTGGCCTAGAAACACTTGATCTTTCTTCTATTAATATATCATCCATAGTACCCGACACCCTAACAAATTTGTCTCTTTTGACATCCCTCACCCTTAATCATTGCGGCCTCTTTGGTAAATTACCAAGAAGAATCTTTAAATTACAGAATTTGAAGACTCTTAGGGTGGCCAGCAACCCTGCTCTCACAGAAAATGAAGAATTGTTGAGAAGCCTAGCACAAAACCTAACTGGCCTAGAAGCACTTGATCTTTCTTTCATTAATATATCATCCACAATACCCGACACCCTGACAAATTTGTCTCTTTTGACATCCCTCACCCTTGATGATTGCAGCCTCTTTGGTAAATTACCAGGGAAAATCTTTAAATTAAAGAATTTGAAGGTTCTTCATGTGAGCAACAACCCTGCTCTCACGGGGTATTTTCCTGATGACTATAGTGGAAGTAGTCCTGATCTCATGTCACTCAAACTCTCGTCCACTAATTTTTTCATAAACCTGCCTTCTTTGATAGAAAGGTTTCCTTCACTGAAAGAGTTGGGTGTGAGTTCATGCAATATTTCAGAAGGTCCAGTACCATTTTCACTTGGTAATCTTAGGGATCTCATCTATTTGGACCTTTCAGATAATAAGTTTAATGGTCAAATTCCTGCGGCTATGTTGGGAAACCTTACCCAACTTACTTATCTATCACTGTCTAATAATTATTTTCATGGTTCAGTCCCCCGGTCCTTGTTCAGTCTCATGAATCTTCAAACCCTTCGTCTAGATCATAATAATTTGAGTGGTACAGTAGTGTTAAAGAAGTTTCTTAACCTACAAAAACTCACCGTTCTAGATCTATCTTATAATAATCTAGAATTGCTCACAGAATCTAGATTTTTGAATAAGACAACTAGTGTACTTCCAAAGTTTAGGTATCTAGGATTGGGTGGGTGCAACATAACAGAGTTCCCAGATTTCCTAAGATCTCAAGATGTATTGTCTTGGTTAGATCTCTCTAGAAACAAATTGCAAGGCCAAGTACCAAAATGGATGTGGAACACAAGCACTCAAACTCTCTATCACATTAACATTTCTCATAACTTGCTGTCAGGCTTCGAGAAATCTCCACCTGTCCTTCCATGGCCAAACCTTGAATACTTAGACCTGTCATTCAACATGTTTCATGAATTATTATTGTTACCTTCAACATCCATCATCATGTACTATAACATTGCAAACAACCAATTAACGGGACAAGTTTCACCAATGATTTGCAATATGACTTCTCTTGGATACCTTGATTTGTCAAACAACCAATTAACGGGACAAGTTTCACCAATGATTTGCAATATGACTTCTCTTGGATACCTTGATTTGTCAAACAACCAATTAACGGGACAAGTTTCACCAATGATTTGCAATATGACTTCTCTTGGATACCTTGATTTGTCAAATAACAAGTTGATTGGCGACCTACCTCAGTGTGGGGGAGACTTCAGTGTTAATCTGGAATATCTCAAACTTGGAAACAACTCATTTCATGGAAATCTTCCTCAATCATACTCCAGTGGAAGCAATTTAAGGATGATGGATATTAGTCACAACAGTTTCCAGGGGCAACTACCGAGGTCACTAGTGAATTGTACAAGTCTTGAAATTTTAGTCCTTTCACACAATAATTTTAGTGATACCTTCCCTGTTTGGTTGGGAGCTCTCCCTGAGTTGAAAATTTTGACAGTGGACCACAATGTGTTCTATGGAGTGATTGTGAAGCCTGACAAGAAGAATCTTCAATTTCCGGTGCTGCATATTCTTGATTTGTCTTACAATAATTTCTCAGGTCAGTTTCCATTTGAATACATTTTTTCTGGAAATGGGACAACAAGTATCACTCATGATTTGGAGCATTACTACATTGGTTCATTTGGTGGTGAGTATTACTCAATCACGATAATCAATAAAGGTGTGGAGAGATACTATCCAAGAGTTCCGGAGGACTTGATACTCATTGACATCTCAAGCAACAAATTTGAAGGGAAGATTCCTGAATTCATTGGGAAACTTGAGGGGATCTGGTCACTCAATCTCTCCAATAACATTCTCACGGGTCGCATCCCATCATCCTTGAGCAACTTATCAAGGCTTGAATCGTTGGATCTTTCACATAACAAGCTCTCTGGTGAGATTCCTCAGCAACTGGCACAACTTGATTTTCTCACAAAGTTCAATGTCTCTCACAACAATCTCACAGGCCCCGTACCACGGGGAAGTCACTTCACTACATTTGACAGCACTTCATATCTGGGAAACCAAGGATTGTGCGGAGATCTATTGCCAAAGAAATGTGGAAATTCTGAGGGCACTCAACTTCCACCTTCAACATCAGAAGATAATGACTCGGGCTCTGGAATTGAATTGGATTGGAAATTTGTTGTGGCAGGGTTAGGGAGTGGCTTGTTGGTGGGAGTGGTTCTTGCAGACTTTGTGATTACCAAGTGGAATGTGTGGTTCATTGAGATTGTTGCAGTACTGATCATGTTTTCGAAAAGGATAAGGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-met

Protein Analysis

1043

Amino Acids

115.81

Weight (kDa)

5.72

Isoelectric Point (pI)

41.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 38 - 90 3.2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 112 - 206 1.6e-06 Leucine-rich repeat region
LRR_14 PF23598 193 - 406 3.4e-13 Leucine-rich repeat region
LRR_14 PF23598 367 - 555 5e-11 Leucine-rich repeat region
LRR_8 PF13855 370 - 431 9e-06 Leucine rich repeat
LRR_8 PF13855 399 - 456 1.5e-06 Leucine rich repeat
LRR_8 PF13855 692 - 751 6.9e-07 Leucine rich repeat
LRR_8 PF13855 715 - 773 1.7e-07 Leucine rich repeat
LRR_8 PF13855 883 - 939 9.9e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1434
AasI GACNNNNNNGTC 1 cut(s) 883
Acc36I ACCTGC 1 cut(s) 1092
AccB7I CCANNNNNTGG 1 cut(s) 73
AccIII TCCGGA 1 cut(s) 2560
AciI CCGC 3 cut(s) 690, 1238, 2892
AclWI GGATC 4 cut(s) 234, 1194, 2648, 2733
AcoI YGGCCR 3 cut(s) 78, 753, 1712
AcuI CTGAAG 4 cut(s) 159, 350, 510, 2050
AdeI CACNNNGTG 1 cut(s) 2320
AfaI GTAC 9 cut(s) 636, 1161, 1375, 1488, 1611, 1793, 2215, 2829, 3099
AfiI CCNNNNNNNGG 6 cut(s) 73, 1819, 1891, 1963, 2054, 2832
AflIII ACRYGT 1 cut(s) 1746
AhlI ACTAGT 2 cut(s) 1481, 2203
AjnI CCWGG 2 cut(s) 937, 2181
AjuI GAANNNNNNNTTGG 2 cut(s) 190, 222
AluBI AGCT 7 cut(s) 84, 153, 312, 333, 575, 2282, 2743
AluI AGCT 7 cut(s) 84, 153, 312, 333, 575, 2282, 2743
Alw21I GWGCWC 1 cut(s) 2284
Alw26I GTCTC 5 cut(s) 663, 891, 1331, 2055, 2806
AlwI GGATC 4 cut(s) 234, 1194, 2648, 2733
AlwNI CAGNNNCTG 2 cut(s) 373, 2767
Ama87I CYCGRG 1 cut(s) 2968
Aor13HI TCCGGA 1 cut(s) 2560
AoxI GGCC 8 cut(s) 78, 589, 691, 753, 817, 1603, 1712, 2821
ApeKI GCWGC 4 cut(s) 136, 309, 918, 2374
ArsI GACNNNNNNTTYG 2 cut(s) 1333, 1365
AseI ATTAAT 2 cut(s) 618, 846
Asp700I GAANNNNTTC 1 cut(s) 1104
AspS9I GGNCC 5 cut(s) 1154, 1201, 1314, 2311, 2822
AsuC2I CCSGG 1 cut(s) 1312
AsuHPI GGTGA 8 cut(s) 667, 895, 1405, 1824, 1896, 1968, 2513, 2762
AsuII TTCGAA 1 cut(s) 3113
AvaI CYCGRG 1 cut(s) 2968
AvaII GGWCC 4 cut(s) 1154, 1201, 1314, 2311
BaeGI GKGCMC 1 cut(s) 2933
BaeI ACNNNNGTAYC 2 cut(s) 1365, 1398
BalI TGGCCA 3 cut(s) 80, 755, 1714
BanII GRGCYC 2 cut(s) 2284, 2975
BarI GAAGNNNNNNTAC 2 cut(s) 1143, 1175
BbsI GAAGAC 3 cut(s) 281, 507, 746
Bbv12I GWGCWC 1 cut(s) 2284
BbvCI CCTCAGC 1 cut(s) 2760
BbvI GCAGC 4 cut(s) 123, 321, 930, 2361
BccI CCATC 8 cut(s) 44, 75, 179, 248, 493, 1790, 2152, 2695
BciT130I CCWGG 2 cut(s) 939, 2183
BciVI GTATCC 3 cut(s) 1856, 1928, 2000
BclI TGATCA 1 cut(s) 3102
BcnI CCSGG 1 cut(s) 1312
BcoDI GTCTC 5 cut(s) 663, 891, 1331, 2055, 2806
BcuI ACTAGT 2 cut(s) 1481, 2203
BfmI CTRYAG 2 cut(s) 219, 1021
BfuAI ACCTGC 1 cut(s) 1092
BfuI GTATCC 3 cut(s) 1856, 1928, 2000
BglII AGATCT 5 cut(s) 123, 1423, 1553, 1579, 2896
BisI GCNGC 6 cut(s) 137, 310, 691, 919, 1239, 2375
BlsI GCNGC 6 cut(s) 138, 311, 692, 920, 1240, 2376
BmcAI AGTACT 1 cut(s) 3099
Bme1390I CCNGG 3 cut(s) 939, 1312, 2183
Bme18I GGWCC 4 cut(s) 1154, 1201, 1314, 2311
BmeT110I CYCGRG 1 cut(s) 2968
BmgT120I GGNCC 5 cut(s) 1154, 1201, 1314, 2311, 2822
BmiI GGNNCC 1 cut(s) 2824
BmrFI CCNGG 3 cut(s) 939, 1312, 2183
BmsI GCATC 1 cut(s) 2691
BpiI GAAGAC 3 cut(s) 281, 507, 746
BplI GAGNNNNNCTC 2 cut(s) 2495, 2527
BpmI CTGGAG 1 cut(s) 2119
Bpu10I CCTNAGC 2 cut(s) 440, 2760
Bpu14I TTCGAA 1 cut(s) 3113
BpuEI CTTGAG 4 cut(s) 1542, 2572, 2654, 2716
BpuMI CCSGG 1 cut(s) 1312
BsaJI CCNNGG 8 cut(s) 434, 938, 1310, 1709, 2182, 2195, 2831, 2881
BsaWI WCCGGW 2 cut(s) 2368, 2560
BsaXI ACNNNNNCTCC 2 cut(s) 2322, 2352
Bsc4I CCNNNNNNNGG 6 cut(s) 73, 1819, 1891, 1963, 2054, 2832
Bse1I ACTGG 5 cut(s) 592, 820, 1157, 2136, 2772
Bse3DI GCAATG 3 cut(s) 541, 685, 1800
BseAI TCCGGA 1 cut(s) 2560
BseBI CCWGG 2 cut(s) 939, 2183
BseDI CCNNGG 8 cut(s) 434, 938, 1310, 1709, 2182, 2195, 2831, 2881
BseLI CCNNNNNNNGG 6 cut(s) 73, 1819, 1891, 1963, 2054, 2832
BseMI GCAATG 3 cut(s) 541, 685, 1800
BseMII CTCAG 6 cut(s) 454, 2063, 2280, 2421, 2774, 2916
BseNI ACTGG 5 cut(s) 592, 820, 1157, 2136, 2772
BseSI GKGCMC 1 cut(s) 2933
BseXI GCAGC 4 cut(s) 123, 321, 930, 2361
BshFI GGCC 8 cut(s) 80, 591, 693, 755, 819, 1605, 1714, 2823
BsiHKAI GWGCWC 1 cut(s) 2284
BsiHKCI CYCGRG 1 cut(s) 2968
BsiSI CCGG 3 cut(s) 1312, 2369, 2561
BslFI GGGAC 6 cut(s) 467, 1292, 1836, 1908, 1980, 2461
BslI CCNNNNNNNGG 6 cut(s) 73, 1819, 1891, 1963, 2054, 2832
BsmAI GTCTC 5 cut(s) 663, 891, 1331, 2055, 2806
BsmFI GGGAC 6 cut(s) 467, 1292, 1836, 1908, 1980, 2461
BsnI GGCC 8 cut(s) 80, 591, 693, 755, 819, 1605, 1714, 2823
BsoBI CYCGRG 1 cut(s) 2968
Bsp119I TTCGAA 1 cut(s) 3113
Bsp1286I GDGCHC 3 cut(s) 2284, 2933, 2975
Bsp13I TCCGGA 1 cut(s) 2560
Bsp1407I TGTACA 1 cut(s) 2213
Bsp19I CCATGG 1 cut(s) 1709
BspACI CCGC 3 cut(s) 690, 1238, 2892
BspANI GGCC 8 cut(s) 80, 591, 693, 755, 819, 1605, 1714, 2823
BspCNI CTCAG 6 cut(s) 453, 2062, 2281, 2420, 2773, 2917
BspEI TCCGGA 1 cut(s) 2560
BspHI TCATGA 3 cut(s) 1329, 1753, 2464
BspLI GGNNCC 1 cut(s) 2824
BspMAI CTGCAG 1 cut(s) 223
BspMI ACCTGC 1 cut(s) 1092
BspPI GGATC 4 cut(s) 234, 1194, 2648, 2733
BspT104I TTCGAA 1 cut(s) 3113
BsrDI GCAATG 3 cut(s) 541, 685, 1800
BsrGI TGTACA 1 cut(s) 2213
BsrI ACTGG 5 cut(s) 592, 820, 1157, 2136, 2772
BssECI CCNNGG 8 cut(s) 434, 938, 1310, 1709, 2182, 2195, 2831, 2881
BssT1I CCWWGG 3 cut(s) 434, 1709, 2881
Bst2UI CCWGG 2 cut(s) 939, 2183
Bst4CI ACNGT 6 cut(s) 31, 1281, 1378, 1417, 2177, 2308
BstAPI GCANNNNNTGC 1 cut(s) 243
BstAUI TGTACA 1 cut(s) 2213
BstBI TTCGAA 1 cut(s) 3113
BstC8I GCNNGC 2 cut(s) 82, 757
BstDSI CCRYGG 2 cut(s) 1709, 2831
BstMAI GTCTC 5 cut(s) 663, 891, 1331, 2055, 2806
BstMWI GCNNNNNNNGC 3 cut(s) 145, 243, 330
BstNI CCWGG 2 cut(s) 939, 2183
BstNSI RCATGY 1 cut(s) 1750
BstSCI CCNGG 3 cut(s) 937, 1310, 2181
BstSFI CTRYAG 2 cut(s) 219, 1021
BstSLI GKGCMC 1 cut(s) 2933
BstV1I GCAGC 4 cut(s) 123, 321, 930, 2361
BstV2I GAAGAC 3 cut(s) 281, 507, 746
BstX2I RGATCY 8 cut(s) 123, 1186, 1423, 1553, 1579, 2640, 2725, 2896
BstXI CCANNNNNNTGG 1 cut(s) 88
BstYI RGATCY 8 cut(s) 123, 1186, 1423, 1553, 1579, 2640, 2725, 2896
BsuI GTATCC 3 cut(s) 1856, 1928, 2000
BsuRI GGCC 8 cut(s) 80, 591, 693, 755, 819, 1605, 1714, 2823
BtgI CCRYGG 2 cut(s) 1709, 2831
BtsIMutI CAGTG 6 cut(s) 1112, 1277, 2057, 2074, 2143, 2313
BveI ACCTGC 1 cut(s) 1092
Cac8I GCNNGC 2 cut(s) 82, 757
CaiI CAGNNNCTG 2 cut(s) 373, 2767
CciI TCATGA 3 cut(s) 1329, 1753, 2464
Cfr13I GGNCC 5 cut(s) 1154, 1201, 1314, 2311, 2822
CseI GACGC 1 cut(s) 359
Csp6I GTAC 9 cut(s) 635, 1160, 1374, 1487, 1610, 1792, 2214, 2828, 3098
CviQI GTAC 9 cut(s) 635, 1160, 1374, 1487, 1610, 1792, 2214, 2828, 3098
DraI TTTAAA 2 cut(s) 724, 952
DraIII CACNNNGTG 1 cut(s) 2320
DrdI GACNNNNNNGTC 1 cut(s) 883
DseDI GACNNNNNNGTC 1 cut(s) 883
EaeI YGGCCR 3 cut(s) 78, 753, 1712
Ecl136II GAGCTC 1 cut(s) 2282
Eco130I CCWWGG 3 cut(s) 434, 1709, 2881
Eco24I GRGCYC 2 cut(s) 2284, 2975
Eco47I GGWCC 4 cut(s) 1154, 1201, 1314, 2311
Eco53kI GAGCTC 1 cut(s) 2282
Eco57I CTGAAG 4 cut(s) 159, 350, 510, 2050
Eco88I CYCGRG 1 cut(s) 2968
EcoICRI GAGCTC 1 cut(s) 2282
EcoO109I RGGNCCY 1 cut(s) 2822
EcoRI GAATTC 1 cut(s) 2618
EcoRII CCWGG 2 cut(s) 937, 2181
EcoT14I CCWWGG 3 cut(s) 434, 1709, 2881
EcoT38I GRGCYC 2 cut(s) 2284, 2975
ErhI CCWWGG 3 cut(s) 434, 1709, 2881
FalI AAGNNNNNCTT 4 cut(s) 137, 169, 1093, 1125
FaqI GGGAC 6 cut(s) 467, 1292, 1836, 1908, 1980, 2461
FbaI TGATCA 1 cut(s) 3102
Fnu4HI GCNGC 6 cut(s) 137, 310, 691, 919, 1239, 2375
FriOI GRGCYC 2 cut(s) 2284, 2975
Fsp4HI GCNGC 6 cut(s) 137, 310, 691, 919, 1239, 2375
GluI GCNGC 6 cut(s) 137, 310, 691, 919, 1239, 2375
GsuI CTGGAG 1 cut(s) 2119
HaeIII GGCC 8 cut(s) 80, 591, 693, 755, 819, 1605, 1714, 2823
HapII CCGG 3 cut(s) 1312, 2369, 2561
HgaI GACGC 1 cut(s) 359
HindIII AAGCTT 1 cut(s) 151
HpaII CCGG 3 cut(s) 1312, 2369, 2561
HphI GGTGA 8 cut(s) 667, 895, 1405, 1824, 1896, 1968, 2513, 2762
Hpy166II GTNNAC 3 cut(s) 1065, 1487, 2311
Hpy188I TCNGA 6 cut(s) 375, 490, 1150, 1210, 2926, 2956
Hpy8I GTNNAC 3 cut(s) 1065, 1487, 2311
HpyCH4III ACNGT 6 cut(s) 31, 1281, 1378, 1417, 2177, 2308
HpyF10VI GCNNNNNNNGC 3 cut(s) 145, 243, 330
Kpn2I TCCGGA 1 cut(s) 2560
Ksp22I TGATCA 1 cut(s) 3102
LmnI GCTCC 3 cut(s) 338, 2279, 2473
Lsp1109I GCAGC 4 cut(s) 123, 321, 930, 2361
LweI GCATC 1 cut(s) 2691
MaeIII GTNAC 6 cut(s) 1047, 1767, 2168, 2199, 2646, 2840
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 8 cut(s) 123, 1186, 1423, 1553, 1579, 2640, 2725, 2896
MhlI GDGCHC 3 cut(s) 2284, 2933, 2975
MlsI TGGCCA 3 cut(s) 80, 755, 1714
MluNI TGGCCA 3 cut(s) 80, 755, 1714
MlyI GAGTC 4 cut(s) 101, 267, 736, 2960
MmeI TCCRAC 2 cut(s) 360, 2703
Mox20I TGGCCA 3 cut(s) 80, 755, 1714
MroI TCCGGA 1 cut(s) 2560
MroXI GAANNNNTTC 1 cut(s) 1104
MscI TGGCCA 3 cut(s) 80, 755, 1714
MslI CAYNNNNRTG 3 cut(s) 16, 117, 1787
Msp20I TGGCCA 3 cut(s) 80, 755, 1714
MspI CCGG 3 cut(s) 1312, 2369, 2561
MspR9I CCNGG 3 cut(s) 939, 1312, 2183
MunI CAATTG 1 cut(s) 54
MvaI CCWGG 2 cut(s) 939, 2183
MwoI GCNNNNNNNGC 3 cut(s) 145, 243, 330
NciI CCSGG 1 cut(s) 1312
NcoI CCATGG 1 cut(s) 1709
NlaIV GGNNCC 1 cut(s) 2824
NmuCI GTSAC 5 cut(s) 1047, 2168, 2199, 2646, 2840
NspI RCATGY 1 cut(s) 1750
NspV TTCGAA 1 cut(s) 3113
PagI TCATGA 3 cut(s) 1329, 1753, 2464
PciI ACATGT 1 cut(s) 1746
PdmI GAANNNNTTC 1 cut(s) 1104
PfeI GAWTC 7 cut(s) 717, 1333, 1457, 2356, 2611, 2717, 2755
PflMI CCANNNNNTGG 1 cut(s) 73
PkrI GCNGC 6 cut(s) 138, 311, 692, 920, 1240, 2376
PleI GAGTC 4 cut(s) 100, 266, 736, 2960
PpsI GAGTC 4 cut(s) 100, 266, 736, 2960
PscI ACATGT 1 cut(s) 1746
PshBI ATTAAT 2 cut(s) 618, 846
PsiI TTATAA 1 cut(s) 1434
Psp124BI GAGCTC 1 cut(s) 2284
Psp6I CCWGG 2 cut(s) 937, 2181
PspGI CCWGG 2 cut(s) 937, 2181
PspN4I GGNNCC 1 cut(s) 2824
PspPI GGNCC 5 cut(s) 1154, 1201, 1314, 2311, 2822
PstI CTGCAG 1 cut(s) 223
PstNI CAGNNNCTG 2 cut(s) 373, 2767
PsuI RGATCY 8 cut(s) 123, 1186, 1423, 1553, 1579, 2640, 2725, 2896
RsaI GTAC 9 cut(s) 636, 1161, 1375, 1488, 1611, 1793, 2215, 2829, 3099
RsaNI GTAC 9 cut(s) 635, 1160, 1374, 1487, 1610, 1792, 2214, 2828, 3098
RseI CAYNNNNRTG 3 cut(s) 16, 117, 1787
SacI GAGCTC 1 cut(s) 2284
SatI GCNGC 6 cut(s) 137, 310, 691, 919, 1239, 2375
Sau96I GGNCC 5 cut(s) 1154, 1201, 1314, 2311, 2822
ScaI AGTACT 1 cut(s) 3099
SchI GAGTC 4 cut(s) 101, 267, 736, 2960
ScrFI CCNGG 3 cut(s) 939, 1312, 2183
SduI GDGCHC 3 cut(s) 2284, 2933, 2975
SfaNI GCATC 1 cut(s) 2691
SfcI CTRYAG 2 cut(s) 219, 1021
SfuI TTCGAA 1 cut(s) 3113
SinI GGWCC 4 cut(s) 1154, 1201, 1314, 2311
SmiMI CAYNNNNRTG 3 cut(s) 16, 117, 1787
SmlI CTYRAG 4 cut(s) 1557, 2587, 2633, 2695
SmoI CTYRAG 4 cut(s) 1557, 2587, 2633, 2695
SpeI ACTAGT 2 cut(s) 1481, 2203
SsiI CCGC 3 cut(s) 690, 1238, 2892
SspI AATATT 1 cut(s) 1144
SstI GAGCTC 1 cut(s) 2284
StyD4I CCNGG 3 cut(s) 937, 1310, 2181
StyI CCWWGG 3 cut(s) 434, 1709, 2881
TaaI ACNGT 6 cut(s) 31, 1281, 1378, 1417, 2177, 2308
TaqI TCGA 4 cut(s) 261, 522, 1686, 3113
TatI WGTACW 4 cut(s) 1486, 1791, 2213, 3097
TauI GCSGC 2 cut(s) 693, 1241
TfiI GAWTC 7 cut(s) 717, 1333, 1457, 2356, 2611, 2717, 2755
TscAI CASTG 6 cut(s) 1119, 1284, 2057, 2074, 2143, 2313
TseFI GTSAC 5 cut(s) 1047, 2168, 2199, 2646, 2840
TseI GCWGC 4 cut(s) 136, 309, 918, 2374
Tsp45I GTSAC 5 cut(s) 1047, 2168, 2199, 2646, 2840
TspRI CASTG 6 cut(s) 1119, 1284, 2057, 2074, 2143, 2313
Van91I CCANNNNNTGG 1 cut(s) 73
VpaK11BI GGWCC 4 cut(s) 1154, 1201, 1314, 2311
VspI ATTAAT 2 cut(s) 618, 846
XbaI TCTAGA 5 cut(s) 1351, 1420, 1441, 1460, 1586
XceI RCATGY 1 cut(s) 1750
XcmI CCANNNNNNNNNTGG 1 cut(s) 1620
XmnI GAANNNNTTC 1 cut(s) 1104
ZrmI AGTACT 1 cut(s) 3099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.