MD07G1201600.v1.1

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0015032
Physical Location & Seq
Reverse (-)
27964340 .. 27965626
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1201600.v1.1.491

Sequence Viewer

Length: 1287 bp
ATGCTCATTCTCCTACCCTTCCTTCTTCTTCAACTCCTCACCACCCTCTGTTTCTCTGCTCCAAAACCAGAAACTCTAATCCTACCCCTCAAAACACAAACCCTCCCTCAAGGGTACCTCCCAAAATCCACCAACAAGCTCTCCTTCCACCACAACGTCACCCTCACAATCTCGCTTTTGGTCGGCTCGCCGCCGCAGCAAGTCACCATGGTCCTTGACACCGGCAGCGAGCTCTCCTGGCTCCGCTGCAAAAAAGCTCCCAACTTCAACTTCGTTTTTAACCCACTTGCATCCAAGTCCTACTCCCCAGTCCCCTGCTCCTCCCCCGTCTGCCGGACCAGGACCAGCGACTTCCCTAATCCCGTTTCCTGCGACCCGAAAAAGCTCTGCCACGCCATTCTCTCCTACGCAGACGGTTCCTCCATCGAAGGCAACCTCGCATTGGAAACTTTCAATCTCGGGTCGTCAGCCCAACCCGGTACGATATTCGGGTGCATGGATTCCGGGTCCAGTTCGAACGCCGACGAGGACGCCAAGACAACCGGGTTAATGGGCATGAACCGCGGGTCATTGTCCTTCGTAACACAGATGGGATTTCCGAAATTTTCCTACTGCATATCGGATCGCGACTCGACCGGTATTTTGCTTTTCGGCGAAGCGAAATTCGATTGGCTCAAACCGTTAAATTACACCCCTCTGGTTCAGATATCGACACCATTACCGTACTTCGACCGGGTCGCGTACTCGGTCCAGCTGGAGGGGATCCGGGTTGGAGGTAAGGTGTTACCGCTCCCGAAATCGGTTTTCGTACCGGACCATACCGGGGCAGGTCAAACAATGGTCGACTCGGGGACCCAGTTCACTTTCCTACTCGGTCCGGTTTACACTGCGCTGAAAAACGAATTCGCTCAGCAGACCAAACCGGTTCTGAAAACTTTGGACGACCCGAATTTCGTGTTCCAAGGAGCGATGGATTTGTGTTTCCAAGTCCCCACGAACCGGCCAAGCCTGCCCGAGTTGCCGACAGTGACGCTGATGTTTCGGGGGGCCGAGATAAGCGTATCGAGGGAGAGGCTGCTGTATCGGGTGGCGGGAATGGTGAGGGGCGGGAATCAGGTGTATTGCTTCACATACGGGAACTCTGACTTGCTGGGCATAGAGGCGTTTGTGATTGGTCACTATCATCAGCAGAACCTGTGGATGGAATTTGATCTGGAGAAATCTAGGGTGGGAGTGGCTGAGGTTAGGTGTGATCTTGCTGGTCAAAAGCTTGGCCTAGGTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

429

Amino Acids

46.84

Weight (kDa)

7.5

Isoelectric Point (pI)

33.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 57 - 218 1.9e-37 Xylanase inhibitor N-terminal
Asp PF00026 59 - 415 1.4e-16 Eukaryotic aspartyl protease
TAXi_C PF14541 247 - 411 5.8e-33 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015032)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39710
fragaria_vesca FvH4_7g22840
malus_domestica MD01G1136600.v1.1 MD07G1201600.v1.1
prunus_persica Prupe.2G238200_v2.0.a1
pyrus_communis pycom01g15730 pycom07g18860
rosa_chinensis RchiOBHm_Chr1g0368001
rosa_laevigata RLG00000027248
rosa_roxburghii Rroxscaffold_4G00288960
rosa_rugosa Rorug01G0338400
rosa_samantha Rh1AG345100 Rh1BG307400 Rh1CG323000 Rh1DG339500
rosa_wichuraiana Rw1G030710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 818
Acc65I GGTACC 1 cut(s) 114
AccB1I GGYRCC 1 cut(s) 114
AccBSI CCGCTC 1 cut(s) 790
AccI GTMKAC 1 cut(s) 843
AccII CGCG 3 cut(s) 564, 627, 740
AciI CCGC 8 cut(s) 191, 194, 244, 562, 564, 788, 1091, 1107
AclWI GGATC 3 cut(s) 630, 757, 770
AcoI YGGCCR 1 cut(s) 1001
AcsI RAATTY 5 cut(s) 602, 662, 902, 949, 1205
AcyI GRCGYC 1 cut(s) 531
AfaI GTAC 5 cut(s) 116, 481, 725, 743, 810
AfiI CCNNNNNNNGG 7 cut(s) 333, 442, 757, 799, 823, 999, 1201
AgeI ACCGGT 2 cut(s) 635, 922
AgsI TTSAA 3 cut(s) 32, 268, 454
AjnI CCWGG 2 cut(s) 236, 338
AjuI GAANNNNNNNTTGG 2 cut(s) 254, 286
AluBI AGCT 6 cut(s) 139, 232, 257, 385, 754, 1270
AluI AGCT 6 cut(s) 139, 232, 257, 385, 754, 1270
Alw21I GWGCWC 1 cut(s) 234
AlwI GGATC 3 cut(s) 630, 757, 770
AlwNI CAGNNNCTG 1 cut(s) 1195
Ama87I CYCGRG 3 cut(s) 458, 847, 1013
AoxI GGCC 3 cut(s) 1001, 1047, 1273
ApeKI GCWGC 4 cut(s) 196, 225, 246, 1075
ApoI RAATTY 5 cut(s) 602, 662, 902, 949, 1205
ArsI GACNNNNNNTTYG 4 cut(s) 625, 657, 935, 967
AsiGI ACCGGT 2 cut(s) 635, 922
Asp718I GGTACC 1 cut(s) 114
AspA2I CCTAGG 1 cut(s) 1276
AspLEI GCGC 1 cut(s) 892
AspS9I GGNCC 9 cut(s) 211, 336, 342, 507, 748, 814, 852, 875, 1047
AsuC2I CCSGG 6 cut(s) 477, 505, 544, 734, 767, 823
AsuHPI GGTGA 4 cut(s) 31, 151, 196, 1111
AsuII TTCGAA 1 cut(s) 515
AvaI CYCGRG 3 cut(s) 458, 847, 1013
AvaII GGWCC 8 cut(s) 211, 336, 342, 507, 748, 814, 852, 875
AvrII CCTAGG 1 cut(s) 1276
BamHI GGATCC 1 cut(s) 762
BanI GGYRCC 1 cut(s) 114
BanII GRGCYC 1 cut(s) 234
Bbv12I GWGCWC 1 cut(s) 234
BbvCI CCTCAGC 1 cut(s) 1239
BbvI GCAGC 4 cut(s) 208, 233, 237, 1062
BccI CCATC 4 cut(s) 431, 583, 964, 1195
BciT130I CCWGG 2 cut(s) 238, 340
BcnI CCSGG 6 cut(s) 477, 505, 544, 734, 767, 823
BfaI CTAG 2 cut(s) 1224, 1277
BfuAI ACCTGC 1 cut(s) 818
BisI GCNGC 6 cut(s) 191, 194, 197, 226, 247, 1076
BlnI CCTAGG 1 cut(s) 1276
BlpI GCTNAGC 1 cut(s) 909
BlsI GCNGC 6 cut(s) 192, 195, 198, 227, 248, 1077
Bme1390I CCNGG 8 cut(s) 238, 340, 477, 505, 544, 734, 767, 823
Bme18I GGWCC 8 cut(s) 211, 336, 342, 507, 748, 814, 852, 875
BmeT110I CYCGRG 3 cut(s) 458, 847, 1013
BmgT120I GGNCC 9 cut(s) 211, 336, 342, 507, 748, 814, 852, 875, 1047
BmiI GGNNCC 8 cut(s) 116, 242, 418, 508, 764, 853, 854, 1048
BmrFI CCNGG 8 cut(s) 238, 340, 477, 505, 544, 734, 767, 823
BmrI ACTGGG 2 cut(s) 302, 850
BmsI GCATC 1 cut(s) 299
BmuI ACTGGG 2 cut(s) 302, 850
BpmI CTGGAG 2 cut(s) 776, 1235
Bpu10I CCTNAGC 1 cut(s) 1239
Bpu1102I GCTNAGC 1 cut(s) 909
Bpu14I TTCGAA 1 cut(s) 515
BpuEI CTTGAG 1 cut(s) 93
BpuMI CCSGG 6 cut(s) 477, 505, 544, 734, 767, 823
BsaHI GRCGYC 1 cut(s) 531
BsaJI CCNNGG 5 cut(s) 207, 562, 822, 961, 1276
BsaWI WCCGGW 4 cut(s) 635, 811, 877, 922
BsaXI ACNNNNNCTCC 8 cut(s) 87, 117, 125, 155, 404, 434, 765, 795
Bsc4I CCNNNNNNNGG 7 cut(s) 333, 442, 757, 799, 823, 999, 1201
Bse118I RCCGGY 4 cut(s) 221, 635, 922, 999
Bse1I ACTGG 3 cut(s) 308, 510, 856
BseBI CCWGG 2 cut(s) 238, 340
BseDI CCNNGG 5 cut(s) 207, 562, 822, 961, 1276
BseGI GGATG 2 cut(s) 290, 1206
BseLI CCNNNNNNNGG 7 cut(s) 333, 442, 757, 799, 823, 999, 1201
BseMII CTCAG 2 cut(s) 923, 1230
BseNI ACTGG 3 cut(s) 308, 510, 856
BseRI GAGGAG 2 cut(s) 26, 310
BseXI GCAGC 4 cut(s) 208, 233, 237, 1062
BseYI CCCAGC 1 cut(s) 1150
Bsh1236I CGCG 3 cut(s) 564, 627, 740
Bsh1285I CGRYCG 2 cut(s) 636, 733
BshFI GGCC 3 cut(s) 1003, 1049, 1275
BshNI GGYRCC 1 cut(s) 114
BshTI ACCGGT 2 cut(s) 635, 922
BsiEI CGRYCG 2 cut(s) 636, 733
BsiHKAI GWGCWC 1 cut(s) 234
BsiHKCI CYCGRG 3 cut(s) 458, 847, 1013
BslFI GGGAC 3 cut(s) 296, 865, 974
BslI CCNNNNNNNGG 7 cut(s) 333, 442, 757, 799, 823, 999, 1201
BsmFI GGGAC 3 cut(s) 296, 865, 974
BsnI GGCC 3 cut(s) 1003, 1049, 1275
BsoBI CYCGRG 3 cut(s) 458, 847, 1013
Bsp119I TTCGAA 1 cut(s) 515
Bsp1286I GDGCHC 1 cut(s) 234
Bsp143I GATC 4 cut(s) 622, 762, 1210, 1252
Bsp1720I GCTNAGC 1 cut(s) 909
Bsp19I CCATGG 1 cut(s) 207
Bsp68I TCGCGA 1 cut(s) 627
BspACI CCGC 8 cut(s) 191, 194, 244, 562, 564, 788, 1091, 1107
BspANI GGCC 3 cut(s) 1003, 1049, 1275
BspCNI CTCAG 2 cut(s) 922, 1231
BspFNI CGCG 3 cut(s) 564, 627, 740
BspLI GGNNCC 8 cut(s) 116, 242, 418, 508, 764, 853, 854, 1048
BspMI ACCTGC 1 cut(s) 818
BspPI GGATC 3 cut(s) 630, 757, 770
BspT104I TTCGAA 1 cut(s) 515
BspT107I GGYRCC 1 cut(s) 114
BsrBI CCGCTC 1 cut(s) 790
BsrFI RCCGGY 4 cut(s) 221, 635, 922, 999
BsrI ACTGG 3 cut(s) 308, 510, 856
BssAI RCCGGY 4 cut(s) 221, 635, 922, 999
BssECI CCNNGG 5 cut(s) 207, 562, 822, 961, 1276
BssMI GATC 4 cut(s) 622, 762, 1210, 1252
BssNI GRCGYC 1 cut(s) 531
BssT1I CCWWGG 3 cut(s) 207, 961, 1276
Bst2UI CCWGG 2 cut(s) 238, 340
Bst4CI ACNGT 4 cut(s) 416, 681, 723, 1027
BstACI GRCGYC 1 cut(s) 531
BstBI TTCGAA 1 cut(s) 515
BstC8I GCNNGC 3 cut(s) 188, 230, 1010
BstDEI CTNAG 2 cut(s) 909, 1239
BstDSI CCRYGG 2 cut(s) 207, 562
BstF5I GGATG 2 cut(s) 290, 1206
BstFNI CGCG 3 cut(s) 564, 627, 740
BstHHI GCGC 1 cut(s) 892
BstKTI GATC 4 cut(s) 625, 765, 1213, 1255
BstMBI GATC 4 cut(s) 622, 762, 1210, 1252
BstMCI CGRYCG 2 cut(s) 636, 733
BstMWI GCNNNNNNNGC 5 cut(s) 196, 238, 561, 1009, 1018
BstNI CCWGG 2 cut(s) 238, 340
BstSCI CCNGG 8 cut(s) 236, 338, 475, 503, 542, 732, 765, 821
BstUI CGCG 3 cut(s) 564, 627, 740
BstV1I GCAGC 4 cut(s) 208, 233, 237, 1062
BstX2I RGATCY 1 cut(s) 762
BstYI RGATCY 1 cut(s) 762
BsuRI GGCC 3 cut(s) 1003, 1049, 1275
BtgI CCRYGG 2 cut(s) 207, 562
BtgZI GCGATG 1 cut(s) 983
BtsCI GGATG 2 cut(s) 290, 1206
BtsI GCAGTG 1 cut(s) 885
BtsIMutI CAGTG 2 cut(s) 885, 1032
BtuMI TCGCGA 1 cut(s) 627
BveI ACCTGC 1 cut(s) 818
Cac8I GCNNGC 3 cut(s) 188, 230, 1010
CaiI CAGNNNCTG 1 cut(s) 1195
CfoI GCGC 1 cut(s) 892
Cfr10I RCCGGY 4 cut(s) 221, 635, 922, 999
Cfr13I GGNCC 9 cut(s) 211, 336, 342, 507, 748, 814, 852, 875, 1047
Cfr42I CCGCGG 1 cut(s) 565
CpoI CGGWCCG 1 cut(s) 875
CseI GACGC 2 cut(s) 539, 1039
Csp6I GTAC 5 cut(s) 115, 480, 724, 742, 809
CspAI ACCGGT 2 cut(s) 635, 922
CspI CGGWCCG 1 cut(s) 875
CviAII CATG 3 cut(s) 208, 496, 556
CviQI GTAC 5 cut(s) 115, 480, 724, 742, 809
DdeI CTNAG 2 cut(s) 909, 1239
DpnI GATC 4 cut(s) 624, 764, 1212, 1254
DpnII GATC 4 cut(s) 622, 762, 1210, 1252
EaeI YGGCCR 1 cut(s) 1001
Ecl136II GAGCTC 1 cut(s) 232
Eco130I CCWWGG 3 cut(s) 207, 961, 1276
Eco24I GRGCYC 1 cut(s) 234
Eco32I GATATC 1 cut(s) 708
Eco47I GGWCC 8 cut(s) 211, 336, 342, 507, 748, 814, 852, 875
Eco53kI GAGCTC 1 cut(s) 232
Eco88I CYCGRG 3 cut(s) 458, 847, 1013
EcoICRI GAGCTC 1 cut(s) 232
EcoO109I RGGNCCY 1 cut(s) 852
EcoRI GAATTC 1 cut(s) 902
EcoRII CCWGG 2 cut(s) 236, 338
EcoRV GATATC 1 cut(s) 708
EcoT14I CCWWGG 3 cut(s) 207, 961, 1276
EcoT38I GRGCYC 1 cut(s) 234
ErhI CCWWGG 3 cut(s) 207, 961, 1276
FaeI CATG 3 cut(s) 211, 499, 559
FaiI YATR 7 cut(s) 209, 497, 557, 617, 819, 1132, 1157
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 3 cut(s) 296, 865, 974
FatI CATG 3 cut(s) 207, 495, 555
FauI CCCGC 3 cut(s) 557, 1084, 1100
FblI GTMKAC 1 cut(s) 843
Fnu4HI GCNGC 6 cut(s) 191, 194, 197, 226, 247, 1076
FokI GGATG 2 cut(s) 277, 1213
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 6 cut(s) 191, 194, 197, 226, 247, 1076
FspBI CTAG 2 cut(s) 1224, 1277
GlaI GCGC 1 cut(s) 891
GluI GCNGC 6 cut(s) 191, 194, 197, 226, 247, 1076
GsaI CCCAGC 1 cut(s) 1154
GsuI CTGGAG 2 cut(s) 776, 1235
HaeIII GGCC 3 cut(s) 1003, 1049, 1275
HgaI GACGC 2 cut(s) 539, 1039
HhaI GCGC 1 cut(s) 892
Hin1I GRCGYC 1 cut(s) 531
Hin1II CATG 3 cut(s) 211, 499, 559
Hin6I GCGC 1 cut(s) 890
HinP1I GCGC 1 cut(s) 890
HincII GTYRAC 1 cut(s) 844
HindII GTYRAC 1 cut(s) 844
HindIII AAGCTT 1 cut(s) 1268
HinfI GANTC 4 cut(s) 500, 629, 845, 1111
HphI GGTGA 4 cut(s) 31, 151, 196, 1111
Hpy166II GTNNAC 3 cut(s) 844, 861, 883
Hpy188I TCNGA 5 cut(s) 600, 622, 705, 930, 1144
Hpy188III TCNNGA 3 cut(s) 626, 793, 1214
Hpy8I GTNNAC 3 cut(s) 844, 861, 883
Hpy99I CGWCG 1 cut(s) 527
HpyAV CCTTC 5 cut(s) 28, 32, 154, 422, 586
HpyCH4III ACNGT 4 cut(s) 416, 681, 723, 1027
HpyCH4IV ACGT 1 cut(s) 156
HpyCH4V TGCA 4 cut(s) 249, 290, 495, 615
HpyF10VI GCNNNNNNNGC 5 cut(s) 196, 238, 561, 1009, 1018
HpyF3I CTNAG 2 cut(s) 909, 1239
HpySE526I ACGT 1 cut(s) 156
Hsp92I GRCGYC 1 cut(s) 531
Hsp92II CATG 3 cut(s) 211, 499, 559
HspAI GCGC 1 cut(s) 890
KflI GGGWCCC 1 cut(s) 852
KpnI GGTACC 1 cut(s) 118
KspI CCGCGG 1 cut(s) 565
Kzo9I GATC 4 cut(s) 622, 762, 1210, 1252
LmnI GCTCC 6 cut(s) 64, 246, 262, 323, 795, 965
Lsp1109I GCAGC 4 cut(s) 208, 233, 237, 1062
LweI GCATC 1 cut(s) 299
MaeI CTAG 2 cut(s) 1224, 1277
MaeII ACGT 1 cut(s) 156
MaeIII GTNAC 6 cut(s) 157, 202, 580, 783, 1027, 1175
MalI GATC 4 cut(s) 624, 764, 1212, 1254
MbiI CCGCTC 1 cut(s) 790
MboI GATC 4 cut(s) 622, 762, 1210, 1252
MboII GAAGA 2 cut(s) 17, 20
MflI RGATCY 1 cut(s) 762
MhlI GDGCHC 1 cut(s) 234
MluCI AATT 6 cut(s) 602, 662, 685, 902, 949, 1205
MlyI GAGTC 2 cut(s) 623, 839
MmeI TCCRAC 1 cut(s) 751
MseI TTAA 4 cut(s) 279, 548, 683, 1285
MspA1I CMGCKG 3 cut(s) 246, 564, 754
MspR9I CCNGG 8 cut(s) 238, 340, 477, 505, 544, 734, 767, 823
MvaI CCWGG 2 cut(s) 238, 340
MvnI CGCG 3 cut(s) 564, 627, 740
MwoI GCNNNNNNNGC 5 cut(s) 196, 238, 561, 1009, 1018
NciI CCSGG 6 cut(s) 477, 505, 544, 734, 767, 823
NcoI CCATGG 1 cut(s) 207
NdeII GATC 4 cut(s) 622, 762, 1210, 1252
NlaIII CATG 3 cut(s) 211, 499, 559
NlaIV GGNNCC 8 cut(s) 116, 242, 418, 508, 764, 853, 854, 1048
NmeAIII GCCGAG 1 cut(s) 1075
NmuCI GTSAC 4 cut(s) 157, 202, 1027, 1175
NruI TCGCGA 1 cut(s) 627
NspV TTCGAA 1 cut(s) 515
PfeI GAWTC 2 cut(s) 500, 1111
PflFI GACNNNGTC 1 cut(s) 734
PinAI ACCGGT 2 cut(s) 635, 922
PkrI GCNGC 6 cut(s) 192, 195, 198, 227, 248, 1077
PleI GAGTC 2 cut(s) 623, 839
PpsI GAGTC 2 cut(s) 623, 839
PpuMI RGGWCCY 1 cut(s) 852
Psp124BI GAGCTC 1 cut(s) 234
Psp5II RGGWCCY 1 cut(s) 852
Psp6I CCWGG 2 cut(s) 236, 338
PspFI CCCAGC 1 cut(s) 1150
PspGI CCWGG 2 cut(s) 236, 338
PspN4I GGNNCC 8 cut(s) 116, 242, 418, 508, 764, 853, 854, 1048
PspPI GGNCC 9 cut(s) 211, 336, 342, 507, 748, 814, 852, 875, 1047
PspPPI RGGWCCY 1 cut(s) 852
PstNI CAGNNNCTG 1 cut(s) 1195
PsuI RGATCY 1 cut(s) 762
PsyI GACNNNGTC 1 cut(s) 734
PvuII CAGCTG 1 cut(s) 754
RruI TCGCGA 1 cut(s) 627
RsaI GTAC 5 cut(s) 116, 481, 725, 743, 810
RsaNI GTAC 5 cut(s) 115, 480, 724, 742, 809
Rsr2I CGGWCCG 1 cut(s) 875
RsrII CGGWCCG 1 cut(s) 875
SacI GAGCTC 1 cut(s) 234
SacII CCGCGG 1 cut(s) 565
SalI GTCGAC 1 cut(s) 842
SaqAI TTAA 4 cut(s) 279, 548, 683, 1285
SatI GCNGC 6 cut(s) 191, 194, 197, 226, 247, 1076
Sau3AI GATC 4 cut(s) 622, 762, 1210, 1252
Sau96I GGNCC 9 cut(s) 211, 336, 342, 507, 748, 814, 852, 875, 1047
SchI GAGTC 2 cut(s) 623, 839
ScrFI CCNGG 8 cut(s) 238, 340, 477, 505, 544, 734, 767, 823
SduI GDGCHC 1 cut(s) 234
SfaNI GCATC 1 cut(s) 299
Sfr303I CCGCGG 1 cut(s) 565
SfuI TTCGAA 1 cut(s) 515
SgrBI CCGCGG 1 cut(s) 565
SinI GGWCC 8 cut(s) 211, 336, 342, 507, 748, 814, 852, 875
SmlI CTYRAG 1 cut(s) 108
SmoI CTYRAG 1 cut(s) 108
Sse9I AATT 6 cut(s) 602, 662, 685, 902, 949, 1205
SsiI CCGC 8 cut(s) 191, 194, 244, 562, 564, 788, 1091, 1107
SspMI CTAG 2 cut(s) 1224, 1277
SstI GAGCTC 1 cut(s) 234
StyD4I CCNGG 8 cut(s) 236, 338, 475, 503, 542, 732, 765, 821
StyI CCWWGG 3 cut(s) 207, 961, 1276
TaaI ACNGT 4 cut(s) 416, 681, 723, 1027
TaiI ACGT 1 cut(s) 159
TaqI TCGA 8 cut(s) 426, 515, 632, 666, 710, 729, 843, 1064
TaqII GACCGA 2 cut(s) 736, 863
TasI AATT 6 cut(s) 602, 662, 685, 902, 949, 1205
TauI GCSGC 2 cut(s) 193, 196
TfiI GAWTC 2 cut(s) 500, 1111
Tru1I TTAA 4 cut(s) 279, 548, 683, 1285
Tru9I TTAA 4 cut(s) 279, 548, 683, 1285
TscAI CASTG 2 cut(s) 892, 1032
TseFI GTSAC 4 cut(s) 157, 202, 1027, 1175
TseI GCWGC 4 cut(s) 196, 225, 246, 1075
Tsp45I GTSAC 4 cut(s) 157, 202, 1027, 1175
TspDTI ATGAA 1 cut(s) 572
TspRI CASTG 2 cut(s) 892, 1032
Tth111I GACNNNGTC 1 cut(s) 734
VpaK11BI GGWCC 8 cut(s) 211, 336, 342, 507, 748, 814, 852, 875
XapI RAATTY 5 cut(s) 602, 662, 902, 949, 1205
XmaJI CCTAGG 1 cut(s) 1276
XmiI GTMKAC 1 cut(s) 843
XspI CTAG 2 cut(s) 1224, 1277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.