Prupe.2G238200_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
25887451 .. 25889410
1960 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G238200.1

Sequence Viewer

Length: 1296 bp
ATGCCCATTGTTCTTCCTCTTCTTCTTCTTCTCTGCTTCTTCACCCACTGCACACTCTGTTTCTCTGCTTCAAAACCACGAACACTCATTCTACCTCTCAAAACAGAGACACTTCCACATGGGTTTGCCCCACATTCAACAAACAAGCTCTCTTTCCACCACAACGTCACCTTAACAATCCAACTTTCCGTGGGTTCGCCCCCACAGAACGTTACCATGGTCCTTGACACAGGCAGTGAGCTCTCTTGGCTCCACTGCAAGAAAGCCCCAAACTTGAACTCTGTTTTCAACCCACTCGCCTCTAAATCTTATTCTACCATACCTTGCTCTTCGCCCGTTTGCCGGACCCGAACCCGAGACTTCTCCATACCCGTTTCCTGCGACCCCAAAAAGCTCTGCCACGCCACTCTCTCCTACGCCGACGCTTCTTCCATTGAAGGCAACCTCGCATCCGAAACTTTCGTTCTCGGGTTGTCCACACAACCCGGTACGATATTCGGGTGCATGGATTCCGGGTTCAGTTCCAACTCGGAGGAAGACGCCAAGACCACCGGGTTAATGGGTATGAACCGCGGGTCGTTATCCTTCGTTACCCAAATGGGGTTCCCGAAATTTTCGTACTGCATATCGGGTCGTGACTCGTCCGGTATTCTACTTTTCGGGGAAGCGAAATTCGCTTGGCTGCGTCCCTTGAACTACACCCCTTTGGTCCAAATATCCACCCCATTGCCGTACTTCGACCGAGTCGCTTACACCGTCCAGCTCGAGGGGATCAGAGTTTCGGGCAAAGTGTTACCGCTCCCGAAATCGGTTTTCGTACCGGACCATACCGGGGCTGGTCAGACAATGGTCGACTCGGGAACCCAGTTCACGTTCCTACTCGGTCCGGTTTACACCGCGCTAAAAAACGAGTTCATTCAGCAAACCAAACCGGTTTTGAGAGTTTTGAACGATCCGAATTTCGTTTTCCAAGGAGCCATGGATTTGTGCTACCAAGTCCCGATGAACCGGCCGAGTCTGCCCCAGCTGCCAACGGTGACCTTAATGTTTCAGGGGGCCGAGATGAGCGTATCGGGCGAGAGGCTGTTGTATCGCGTACCGGGAATGGTGAGGGGTAGTGATTCGGTGTACTGCTTCACATTCGGAAACTCTGACTTGCTAGGCATCGAGGCGTTCGTGATTGGACATCACCATCAGCAAAACGTGTGGATGGAGTTTGACTTGGAGAAGTCCAGAGTGGGAGTGGCTGAGGTTAGGTGTGATCTTGCAAGTCAAAGACTTGGGTTGGGGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

432

Amino Acids

47.23

Weight (kDa)

7.93

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015032)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39710
fragaria_vesca FvH4_7g22840
malus_domestica MD01G1136600.v1.1 MD07G1201600.v1.1
prunus_persica Prupe.2G238200_v2.0.a1
pyrus_communis pycom01g15730 pycom07g18860
rosa_chinensis RchiOBHm_Chr1g0368001
rosa_laevigata RLG00000027248
rosa_roxburghii Rroxscaffold_4G00288960
rosa_rugosa Rorug01G0338400
rosa_samantha Rh1AG345100 Rh1BG307400 Rh1CG323000 Rh1DG339500
rosa_wichuraiana Rw1G030710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 799
AccI GTMKAC 1 cut(s) 852
AccII CGCG 3 cut(s) 573, 899, 1095
AciI CCGC 4 cut(s) 571, 573, 797, 897
AclI AACGTT 1 cut(s) 210
AclWI GGATC 2 cut(s) 779, 947
AcoI YGGCCR 1 cut(s) 1010
AcsI RAATTY 3 cut(s) 611, 671, 958
AcyI GRCGYC 1 cut(s) 540
AfaI GTAC 6 cut(s) 490, 620, 734, 819, 1098, 1130
AfiI CCNNNNNNNGG 5 cut(s) 342, 600, 766, 808, 832
AflIII ACRYGT 1 cut(s) 1203
AgeI ACCGGT 1 cut(s) 931
AgsI TTSAA 7 cut(s) 72, 138, 277, 289, 437, 694, 949
AloI GAACNNNNNNTCC 2 cut(s) 500, 532
AluBI AGCT 5 cut(s) 148, 241, 394, 763, 1027
AluI AGCT 5 cut(s) 148, 241, 394, 763, 1027
Alw21I GWGCWC 1 cut(s) 243
Alw26I GTCTC 2 cut(s) 101, 351
AlwI GGATC 2 cut(s) 779, 947
Ama87I CYCGRG 4 cut(s) 354, 467, 764, 856
AoxI GGCC 2 cut(s) 1010, 1056
ApeKI GCWGC 2 cut(s) 682, 1027
ApoI RAATTY 3 cut(s) 611, 671, 958
AsiGI ACCGGT 1 cut(s) 931
AspLEI GCGC 1 cut(s) 901
AspS9I GGNCC 6 cut(s) 220, 345, 709, 823, 884, 1056
AsuC2I CCSGG 5 cut(s) 486, 514, 553, 832, 1101
AsuHPI GGTGA 5 cut(s) 34, 160, 1048, 1120, 1181
AvaI CYCGRG 4 cut(s) 354, 467, 764, 856
AvaII GGWCC 5 cut(s) 220, 345, 709, 823, 884
BanII GRGCYC 1 cut(s) 243
BbsI GAAGAC 1 cut(s) 543
Bbv12I GWGCWC 1 cut(s) 243
BbvCI CCTCAGC 1 cut(s) 1248
BbvI GCAGC 2 cut(s) 669, 1014
BccI CCATC 2 cut(s) 1200, 1204
BceAI ACGGC 1 cut(s) 715
BcnI CCSGG 5 cut(s) 486, 514, 553, 832, 1101
BcoDI GTCTC 2 cut(s) 101, 351
BfaI CTAG 2 cut(s) 1160, 1294
BisI GCNGC 2 cut(s) 683, 1028
BlsI GCNGC 2 cut(s) 684, 1029
Bme1390I CCNGG 5 cut(s) 486, 514, 553, 832, 1101
Bme18I GGWCC 5 cut(s) 220, 345, 709, 823, 884
BmeT110I CYCGRG 4 cut(s) 354, 467, 764, 856
BmgT120I GGNCC 6 cut(s) 220, 345, 709, 823, 884, 1056
BmiI GGNNCC 6 cut(s) 251, 347, 605, 862, 976, 1057
BmrFI CCNGG 5 cut(s) 486, 514, 553, 832, 1101
BmrI ACTGGG 1 cut(s) 859
BmsI GCATC 2 cut(s) 458, 1173
BmuI ACTGGG 1 cut(s) 859
BoxI GACNNNNGTC 1 cut(s) 848
BpiI GAAGAC 1 cut(s) 543
Bpu10I CCTNAGC 1 cut(s) 1248
BpuMI CCSGG 5 cut(s) 486, 514, 553, 832, 1101
BsaHI GRCGYC 1 cut(s) 540
BsaJI CCNNGG 6 cut(s) 189, 216, 571, 831, 970, 978
BsaWI WCCGGW 4 cut(s) 644, 820, 886, 931
Bsc4I CCNNNNNNNGG 5 cut(s) 342, 600, 766, 808, 832
Bse118I RCCGGY 2 cut(s) 931, 1008
Bse1I ACTGG 1 cut(s) 865
Bse3DI GCAATG 1 cut(s) 725
BseDI CCNNGG 6 cut(s) 189, 216, 571, 831, 970, 978
BseGI GGATG 2 cut(s) 449, 1215
BseLI CCNNNNNNNGG 5 cut(s) 342, 600, 766, 808, 832
BseMI GCAATG 1 cut(s) 725
BseMII CTCAG 1 cut(s) 1239
BseNI ACTGG 1 cut(s) 865
BseX3I CGGCCG 1 cut(s) 1010
BseXI GCAGC 2 cut(s) 669, 1014
BseYI CCCAGC 1 cut(s) 1023
BsgI GTGCAG 1 cut(s) 34
Bsh1236I CGCG 3 cut(s) 573, 899, 1095
Bsh1285I CGRYCG 2 cut(s) 742, 1013
BshFI GGCC 2 cut(s) 1012, 1058
BshTI ACCGGT 1 cut(s) 931
BsiEI CGRYCG 2 cut(s) 742, 1013
BsiHKAI GWGCWC 1 cut(s) 243
BsiHKCI CYCGRG 4 cut(s) 354, 467, 764, 856
BslFI GGGAC 2 cut(s) 672, 983
BslI CCNNNNNNNGG 5 cut(s) 342, 600, 766, 808, 832
BsmAI GTCTC 2 cut(s) 101, 351
BsmFI GGGAC 2 cut(s) 672, 983
BsnI GGCC 2 cut(s) 1012, 1058
BsoBI CYCGRG 4 cut(s) 354, 467, 764, 856
Bsp1286I GDGCHC 1 cut(s) 243
Bsp143I GATC 3 cut(s) 771, 952, 1261
Bsp19I CCATGG 2 cut(s) 216, 978
BspACI CCGC 4 cut(s) 571, 573, 797, 897
BspANI GGCC 2 cut(s) 1012, 1058
BspCNI CTCAG 1 cut(s) 1240
BspFNI CGCG 3 cut(s) 573, 899, 1095
BspLI GGNNCC 6 cut(s) 251, 347, 605, 862, 976, 1057
BspPI GGATC 2 cut(s) 779, 947
BspQI GCTCTTC 1 cut(s) 334
BsrBI CCGCTC 1 cut(s) 799
BsrDI GCAATG 1 cut(s) 725
BsrFI RCCGGY 2 cut(s) 931, 1008
BsrI ACTGG 1 cut(s) 865
BssAI RCCGGY 2 cut(s) 931, 1008
BssECI CCNNGG 6 cut(s) 189, 216, 571, 831, 970, 978
BssMI GATC 3 cut(s) 771, 952, 1261
BssNI GRCGYC 1 cut(s) 540
BssT1I CCWWGG 3 cut(s) 216, 970, 978
Bst4CI ACNGT 2 cut(s) 757, 1036
Bst6I CTCTTC 2 cut(s) 24, 334
BstACI GRCGYC 1 cut(s) 540
BstDEI CTNAG 1 cut(s) 1248
BstDSI CCRYGG 4 cut(s) 189, 216, 571, 978
BstEII GGTNACC 1 cut(s) 1036
BstF5I GGATG 2 cut(s) 449, 1215
BstFNI CGCG 3 cut(s) 573, 899, 1095
BstHHI GCGC 1 cut(s) 901
BstKTI GATC 3 cut(s) 774, 955, 1264
BstMAI GTCTC 2 cut(s) 101, 351
BstMBI GATC 3 cut(s) 771, 952, 1261
BstMCI CGRYCG 2 cut(s) 742, 1013
BstMWI GCNNNNNNNGC 5 cut(s) 247, 674, 1018, 1027, 1074
BstPAI GACNNNNGTC 1 cut(s) 848
BstPI GGTNACC 1 cut(s) 1036
BstSCI CCNGG 5 cut(s) 484, 512, 551, 830, 1099
BstUI CGCG 3 cut(s) 573, 899, 1095
BstV1I GCAGC 2 cut(s) 669, 1014
BstV2I GAAGAC 1 cut(s) 543
BstZI CGGCCG 1 cut(s) 1010
BsuRI GGCC 2 cut(s) 1012, 1058
BtgI CCRYGG 4 cut(s) 189, 216, 571, 978
BtsCI GGATG 2 cut(s) 449, 1215
BtsI GCAGTG 3 cut(s) 46, 241, 253
BtsIMutI CAGTG 3 cut(s) 46, 241, 253
CfoI GCGC 1 cut(s) 901
Cfr10I RCCGGY 2 cut(s) 931, 1008
Cfr13I GGNCC 6 cut(s) 220, 345, 709, 823, 884, 1056
Cfr42I CCGCGG 1 cut(s) 574
CpoI CGGWCCG 1 cut(s) 884
CseI GACGC 3 cut(s) 431, 548, 674
Csp6I GTAC 6 cut(s) 489, 619, 733, 818, 1097, 1129
CspAI ACCGGT 1 cut(s) 931
CspCI CAANNNNNGTGG 2 cut(s) 1187, 1222
CspI CGGWCCG 1 cut(s) 884
CviAII CATG 4 cut(s) 119, 217, 505, 979
CviQI GTAC 6 cut(s) 489, 619, 733, 818, 1097, 1129
DdeI CTNAG 1 cut(s) 1248
DpnI GATC 3 cut(s) 773, 954, 1263
DpnII GATC 3 cut(s) 771, 952, 1261
EaeI YGGCCR 1 cut(s) 1010
EagI CGGCCG 1 cut(s) 1010
Eam1104I CTCTTC 2 cut(s) 24, 334
EarI CTCTTC 2 cut(s) 24, 334
Ecl136II GAGCTC 1 cut(s) 241
EclXI CGGCCG 1 cut(s) 1010
Eco130I CCWWGG 3 cut(s) 216, 970, 978
Eco24I GRGCYC 1 cut(s) 243
Eco47I GGWCC 5 cut(s) 220, 345, 709, 823, 884
Eco52I CGGCCG 1 cut(s) 1010
Eco53kI GAGCTC 1 cut(s) 241
Eco88I CYCGRG 4 cut(s) 354, 467, 764, 856
Eco91I GGTNACC 1 cut(s) 1036
EcoICRI GAGCTC 1 cut(s) 241
EcoO65I GGTNACC 1 cut(s) 1036
EcoT14I CCWWGG 3 cut(s) 216, 970, 978
EcoT38I GRGCYC 1 cut(s) 243
ErhI CCWWGG 3 cut(s) 216, 970, 978
FaeI CATG 4 cut(s) 122, 220, 508, 982
FaiI YATR 9 cut(s) 120, 218, 320, 368, 506, 566, 626, 828, 980
FaqI GGGAC 2 cut(s) 672, 983
FatI CATG 4 cut(s) 118, 216, 504, 978
FauI CCCGC 1 cut(s) 566
FblI GTMKAC 1 cut(s) 852
Fnu4HI GCNGC 2 cut(s) 683, 1028
FokI GGATG 2 cut(s) 436, 1222
FriOI GRGCYC 1 cut(s) 243
Fsp4HI GCNGC 2 cut(s) 683, 1028
FspBI CTAG 2 cut(s) 1160, 1294
GlaI GCGC 1 cut(s) 900
GluI GCNGC 2 cut(s) 683, 1028
GsaI CCCAGC 1 cut(s) 1027
HaeIII GGCC 2 cut(s) 1012, 1058
HgaI GACGC 3 cut(s) 431, 548, 674
HhaI GCGC 1 cut(s) 901
Hin1I GRCGYC 1 cut(s) 540
Hin1II CATG 4 cut(s) 122, 220, 508, 982
Hin6I GCGC 1 cut(s) 899
HinP1I GCGC 1 cut(s) 899
HincII GTYRAC 1 cut(s) 853
HindII GTYRAC 1 cut(s) 853
HinfI GANTC 6 cut(s) 509, 638, 744, 854, 1015, 1121
HphI GGTGA 5 cut(s) 34, 160, 1048, 1120, 1181
Hpy166II GTNNAC 5 cut(s) 477, 853, 870, 892, 1129
Hpy188I TCNGA 7 cut(s) 454, 532, 776, 843, 957, 1145, 1153
Hpy188III TCNNGA 7 cut(s) 607, 635, 802, 858, 1000, 1177, 1233
Hpy8I GTNNAC 5 cut(s) 477, 853, 870, 892, 1129
Hpy99I CGWCG 1 cut(s) 425
HpyAV CCTTC 2 cut(s) 431, 595
HpyCH4III ACNGT 2 cut(s) 757, 1036
HpyCH4IV ACGT 4 cut(s) 165, 210, 872, 1203
HpyCH4V TGCA 5 cut(s) 51, 258, 504, 624, 1268
HpyF10VI GCNNNNNNNGC 5 cut(s) 247, 674, 1018, 1027, 1074
HpyF3I CTNAG 1 cut(s) 1248
HpySE526I ACGT 4 cut(s) 165, 210, 872, 1203
Hsp92I GRCGYC 1 cut(s) 540
Hsp92II CATG 4 cut(s) 122, 220, 508, 982
HspAI GCGC 1 cut(s) 899
KspI CCGCGG 1 cut(s) 574
Kzo9I GATC 3 cut(s) 771, 952, 1261
LguI GCTCTTC 1 cut(s) 334
LmnI GCTCC 3 cut(s) 255, 804, 974
Lsp1109I GCAGC 2 cut(s) 669, 1014
LweI GCATC 2 cut(s) 458, 1173
MaeI CTAG 2 cut(s) 1160, 1294
MaeII ACGT 4 cut(s) 165, 210, 872, 1203
MaeIII GTNAC 6 cut(s) 166, 211, 589, 635, 792, 1036
MalI GATC 3 cut(s) 773, 954, 1263
MbiI CCGCTC 1 cut(s) 799
MboI GATC 3 cut(s) 771, 952, 1261
MboII GAAGA 9 cut(s) 5, 11, 14, 17, 20, 31, 321, 420, 548
MhlI GDGCHC 1 cut(s) 243
MluCI AATT 3 cut(s) 611, 671, 958
MlyI GAGTC 4 cut(s) 632, 753, 848, 1024
MmeI TCCRAC 2 cut(s) 205, 549
MseI TTAA 3 cut(s) 173, 557, 1043
MspA1I CMGCKG 2 cut(s) 573, 1027
MspR9I CCNGG 5 cut(s) 486, 514, 553, 832, 1101
MvnI CGCG 3 cut(s) 573, 899, 1095
MwoI GCNNNNNNNGC 5 cut(s) 247, 674, 1018, 1027, 1074
NciI CCSGG 5 cut(s) 486, 514, 553, 832, 1101
NcoI CCATGG 2 cut(s) 216, 978
NdeII GATC 3 cut(s) 771, 952, 1261
NlaIII CATG 4 cut(s) 122, 220, 508, 982
NlaIV GGNNCC 6 cut(s) 251, 347, 605, 862, 976, 1057
NmeAIII GCCGAG 2 cut(s) 1038, 1084
NmuCI GTSAC 3 cut(s) 166, 635, 1036
PaeR7I CTCGAG 1 cut(s) 764
PciSI GCTCTTC 1 cut(s) 334
PcsI WCGNNNNNNNCGW 2 cut(s) 753, 1173
PfeI GAWTC 2 cut(s) 509, 1121
PflFI GACNNNGTC 1 cut(s) 743
PinAI ACCGGT 1 cut(s) 931
PkrI GCNGC 2 cut(s) 684, 1029
PleI GAGTC 4 cut(s) 632, 752, 848, 1023
PpsI GAGTC 4 cut(s) 632, 752, 848, 1023
PshAI GACNNNNGTC 1 cut(s) 848
Psp124BI GAGCTC 1 cut(s) 243
Psp1406I AACGTT 1 cut(s) 210
PspEI GGTNACC 1 cut(s) 1036
PspFI CCCAGC 1 cut(s) 1023
PspN4I GGNNCC 6 cut(s) 251, 347, 605, 862, 976, 1057
PspPI GGNCC 6 cut(s) 220, 345, 709, 823, 884, 1056
PspXI VCTCGAGB 1 cut(s) 764
PsyI GACNNNGTC 1 cut(s) 743
PvuII CAGCTG 1 cut(s) 1027
RsaI GTAC 6 cut(s) 490, 620, 734, 819, 1098, 1130
RsaNI GTAC 6 cut(s) 489, 619, 733, 818, 1097, 1129
Rsr2I CGGWCCG 1 cut(s) 884
RsrII CGGWCCG 1 cut(s) 884
SacI GAGCTC 1 cut(s) 243
SacII CCGCGG 1 cut(s) 574
SalI GTCGAC 1 cut(s) 851
SapI GCTCTTC 1 cut(s) 334
SaqAI TTAA 3 cut(s) 173, 557, 1043
SatI GCNGC 2 cut(s) 683, 1028
Sau3AI GATC 3 cut(s) 771, 952, 1261
Sau96I GGNCC 6 cut(s) 220, 345, 709, 823, 884, 1056
SchI GAGTC 4 cut(s) 632, 753, 848, 1024
ScrFI CCNGG 5 cut(s) 486, 514, 553, 832, 1101
SduI GDGCHC 1 cut(s) 243
SfaNI GCATC 2 cut(s) 458, 1173
Sfr274I CTCGAG 1 cut(s) 764
Sfr303I CCGCGG 1 cut(s) 574
SgrBI CCGCGG 1 cut(s) 574
SinI GGWCC 5 cut(s) 220, 345, 709, 823, 884
SlaI CTCGAG 1 cut(s) 764
SmlI CTYRAG 1 cut(s) 764
SmoI CTYRAG 1 cut(s) 764
Sse9I AATT 3 cut(s) 611, 671, 958
SsiI CCGC 4 cut(s) 571, 573, 797, 897
SspMI CTAG 2 cut(s) 1160, 1294
SstI GAGCTC 1 cut(s) 243
StyD4I CCNGG 5 cut(s) 484, 512, 551, 830, 1099
StyI CCWWGG 3 cut(s) 216, 970, 978
TaaI ACNGT 2 cut(s) 757, 1036
TaiI ACGT 4 cut(s) 168, 213, 875, 1206
TaqI TCGA 4 cut(s) 738, 765, 852, 1167
TaqII GACCGA 2 cut(s) 756, 872
TasI AATT 3 cut(s) 611, 671, 958
TatI WGTACW 1 cut(s) 1128
TfiI GAWTC 2 cut(s) 509, 1121
Tru1I TTAA 3 cut(s) 173, 557, 1043
Tru9I TTAA 3 cut(s) 173, 557, 1043
TscAI CASTG 3 cut(s) 53, 241, 260
TseFI GTSAC 3 cut(s) 166, 635, 1036
TseI GCWGC 2 cut(s) 682, 1027
Tsp45I GTSAC 3 cut(s) 166, 635, 1036
TspDTI ATGAA 3 cut(s) 581, 904, 1019
TspGWI ACGGA 1 cut(s) 178
TspRI CASTG 3 cut(s) 53, 241, 260
Tth111I GACNNNGTC 1 cut(s) 743
VpaK11BI GGWCC 5 cut(s) 220, 345, 709, 823, 884
XapI RAATTY 3 cut(s) 611, 671, 958
XcmI CCANNNNNNNNNTGG 3 cut(s) 556, 833, 1240
XhoI CTCGAG 1 cut(s) 764
XmiI GTMKAC 1 cut(s) 852
XspI CTAG 2 cut(s) 1160, 1294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.