Rroxscaffold_4G00288960

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0015032
Physical Location & Seq
Forward (+)
9603539 .. 9605473
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00288960.1

Sequence Viewer

Length: 1479 bp
ATGCCACTTCTTCTTCATCTTCTCCTTCATTTTTTCACTTACTACAGTCTCTGCTTCTCTTCTCCACTACCTAAAACCCTCATTCTACCTCTCAAATCTTCTCCAGTACCTAAAACCCTCATTCTACCTCTCAAAACCCAGACACTCCCACATGGGTCGATCCCAAAACCCTCAAACAAGCTCTCATTCCACCACAACGTCACCCTAACCATTTCCCTCACAGTCGGGTCGCCCCCACAGAACGTTACCATGGTCCTCGACACAGGCAGTGAACTCTCCTGGCTCCACTGTAAGAAAACCCCGACCCTCACCAACGTCTTTAACCCACTCGCCTCCAAATCCTACATCCCAGTCTCCTGCTCCACCCCCACCTGCCGCACCCGGACCCGGGACCTATCCATACCCGTTTCTTGCGACCCGAAAAAGCTCTGCCACGCCATTCTCTCCTACGCTGACGCCTCCTCCCTGGAAGGCAACCTCGCCTCCGACACTTTCCAACTCGGGTCGTCGGGTCAACCCGGGACCGTATTCGGGTGCATGGACTCCGGGTTCAGCTCCAACTCTGAAGAGGACGCCAAGACAACCGGGTTAATGGGCATGAACCGGGGCTCCTTATCCTTCGTAACCCAAATGGGCTTCCCGAGATTCTCGTACTGCATATCGGGCCGTGACACCTCCGGCGTCTTGCTCTTCGGCGACGCCAACTTCGCGTGGCTTGGGCCGTTAAACTACACGCCGTTAGTCCAAATGTCGACGCCGTTACCGTACTTCGACCGGGTCGCGTACACGGTCCAGCTCGACGGGATCCGGGTCGCCGGGAAAGTACTCCCCCTCCCGAAATCCGTGTTCGTACCCGACCACACCGGGGCGGGTCAGACAATGGTGGACTCTGGCACCCAGTTCACGTTTCTTCTCGGGCCGGTTTACACCGCTTTGAAAAACGAGTTTGTTCTGCAGACCAAACCGGTTCTGAAGCTCCTGGACGACCCGAACTTCGTTTTTCAAGGCGCGATGGATTTGTGTTTTCTGGTTCCGATGAACCGGCCCGGTCTGCCGGTTCTGCCAGCTGTGACGATGATGTTTAAGGGAGCAGAGATGAGCGTAACGGGGGAAAGGCTGCTGTATCGGGTACCGGGAATGGTGAGGGGGAATAATCAGGTGTATTGCTTCACGTTCGGGAACTCCGACTTGCTGGGCGTAGAGGCGTTTGTGATTGGTCACTATCACCAGCAGAACGTGTGGATGGAGTTTGATCTGGTGAAGTCTAGGATGGGAGTGGCCGAGGTTAGGTGTGATCTCGCAAGTCAAAGGCTAGGTGGGGTTTTGGGTCCAAGAATGATGAAGCAGCAGAGATCTGGTTCCATTGTCATGGATTTCCAAAGCTTGATGGAGGGTGCAGAGGGTTGGGGGTCTATGGAGAGTCATGCAGCACGTGCACTGGGTTTTTGGTGGCTCTGTCGGATCAGTGGTTGTGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

492

Amino Acids

53.77

Weight (kDa)

8.61

Isoelectric Point (pI)

32.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 71 - 233 6.4e-36 Xylanase inhibitor N-terminal
Asp PF00026 72 - 429 1e-13 Eukaryotic aspartyl protease
TAXi_C PF14541 261 - 425 9.4e-31 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015032)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39710
fragaria_vesca FvH4_7g22840
malus_domestica MD01G1136600.v1.1 MD07G1201600.v1.1
prunus_persica Prupe.2G238200_v2.0.a1
pyrus_communis pycom01g15730 pycom07g18860
rosa_chinensis RchiOBHm_Chr1g0368001
rosa_laevigata RLG00000027248
rosa_roxburghii Rroxscaffold_4G00288960
rosa_rugosa Rorug01G0338400
rosa_samantha Rh1AG345100 Rh1BG307400 Rh1CG323000 Rh1DG339500
rosa_wichuraiana Rw1G030710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 380
Acc36I ACCTGC 1 cut(s) 380
Acc65I GGTACC 1 cut(s) 1129
AccB1I GGYRCC 2 cut(s) 893, 1129
AccI GTMKAC 1 cut(s) 752
AccII CGCG 3 cut(s) 710, 782, 1010
AciI CCGC 3 cut(s) 376, 869, 930
AclI AACGTT 1 cut(s) 243
AclWI GGATC 4 cut(s) 154, 799, 812, 1469
AcoI YGGCCR 1 cut(s) 1278
AcuI CTGAAG 2 cut(s) 585, 992
AcvI CACGTG 1 cut(s) 1433
AcyI GRCGYC 5 cut(s) 456, 573, 681, 699, 755
AfaI GTAC 7 cut(s) 108, 653, 767, 785, 825, 852, 1131
AfiI CCNNNNNNNGG 5 cut(s) 387, 388, 531, 865, 1287
AflIII ACRYGT 1 cut(s) 1236
AgeI ACCGGT 1 cut(s) 964
AgsI TTSAA 2 cut(s) 937, 1004
AjnI CCWGG 3 cut(s) 278, 465, 978
AloI GAACNNNNNNTCC 4 cut(s) 533, 565, 593, 625
AluBI AGCT 7 cut(s) 181, 427, 555, 796, 976, 1067, 1383
AluI AGCT 7 cut(s) 181, 427, 555, 796, 976, 1067, 1383
Alw21I GWGCWC 1 cut(s) 1438
Alw26I GTCTC 2 cut(s) 53, 358
Alw44I GTGCAC 1 cut(s) 1434
AlwI GGATC 4 cut(s) 154, 799, 812, 1469
AlwNI CAGNNNCTG 1 cut(s) 51
Ama87I CYCGRG 5 cut(s) 387, 500, 518, 640, 914
AoxI GGCC 5 cut(s) 664, 719, 917, 1043, 1278
ApaLI GTGCAC 1 cut(s) 1434
ApeKI GCWGC 3 cut(s) 1117, 1345, 1427
ArsI GACNNNNNNTTYG 4 cut(s) 689, 721, 977, 1009
AsiGI ACCGGT 1 cut(s) 964
Asp718I GGTACC 1 cut(s) 1129
AspLEI GCGC 1 cut(s) 1010
AsuHPI GGTGA 5 cut(s) 193, 301, 1153, 1217, 1270
AvaI CYCGRG 5 cut(s) 387, 500, 518, 640, 914
AvaII GGWCC 6 cut(s) 253, 384, 391, 522, 790, 1328
BaeGI GKGCMC 1 cut(s) 1438
BamHI GGATCC 1 cut(s) 804
BanI GGYRCC 2 cut(s) 893, 1129
BanII GRGCYC 1 cut(s) 611
BbrPI CACGTG 1 cut(s) 1433
Bbv12I GWGCWC 1 cut(s) 1438
BbvI GCAGC 3 cut(s) 1104, 1357, 1439
BccI CCATC 4 cut(s) 1006, 1237, 1264, 1381
BceAI ACGGC 4 cut(s) 651, 706, 721, 742
BciT130I CCWGG 3 cut(s) 280, 467, 980
BcoDI GTCTC 2 cut(s) 53, 358
BfaI CTAG 2 cut(s) 1266, 1313
BfmI CTRYAG 2 cut(s) 43, 953
BfuAI ACCTGC 1 cut(s) 380
BglII AGATCT 1 cut(s) 1352
BisI GCNGC 4 cut(s) 376, 1118, 1346, 1428
BlsI GCNGC 4 cut(s) 377, 1119, 1347, 1429
BmcAI AGTACT 1 cut(s) 825
Bme18I GGWCC 6 cut(s) 253, 384, 391, 522, 790, 1328
BmeT110I CYCGRG 5 cut(s) 387, 500, 518, 640, 914
BmrI ACTGGG 3 cut(s) 344, 892, 1448
BmuI ACTGGG 3 cut(s) 344, 892, 1448
BpmI CTGGAG 1 cut(s) 87
BsaAI YACGTR 1 cut(s) 1433
BsaHI GRCGYC 5 cut(s) 456, 573, 681, 699, 755
BsaJI CCNNGG 7 cut(s) 249, 387, 465, 518, 604, 864, 1281
BsaWI WCCGGW 1 cut(s) 964
BsaXI ACNNNNNCTCC 8 cut(s) 446, 467, 476, 497, 593, 623, 816, 846
Bsc4I CCNNNNNNNGG 5 cut(s) 387, 388, 531, 865, 1287
Bse118I RCCGGY 4 cut(s) 919, 964, 1041, 1054
Bse1I ACTGG 4 cut(s) 104, 350, 898, 1443
BseBI CCWGG 3 cut(s) 280, 467, 980
BseDI CCNNGG 7 cut(s) 249, 387, 465, 518, 604, 864, 1281
BseGI GGATG 3 cut(s) 345, 1248, 1275
BseLI CCNNNNNNNGG 5 cut(s) 387, 388, 531, 865, 1287
BseNI ACTGG 4 cut(s) 104, 350, 898, 1443
BseRI GAGGAG 1 cut(s) 451
BseSI GKGCMC 1 cut(s) 1438
BseXI GCAGC 3 cut(s) 1104, 1357, 1439
BseYI CCCAGC 1 cut(s) 1192
BsgI GTGCAG 1 cut(s) 1416
Bsh1236I CGCG 3 cut(s) 710, 782, 1010
Bsh1285I CGRYCG 1 cut(s) 775
BshFI GGCC 5 cut(s) 666, 721, 919, 1045, 1280
BshNI GGYRCC 2 cut(s) 893, 1129
BshTI ACCGGT 1 cut(s) 964
BsiEI CGRYCG 1 cut(s) 775
BsiHKAI GWGCWC 1 cut(s) 1438
BsiHKCI CYCGRG 5 cut(s) 387, 500, 518, 640, 914
BslFI GGGAC 2 cut(s) 404, 535
BslI CCNNNNNNNGG 5 cut(s) 387, 388, 531, 865, 1287
BsmAI GTCTC 2 cut(s) 53, 358
BsmFI GGGAC 2 cut(s) 404, 535
BsnI GGCC 5 cut(s) 666, 721, 919, 1045, 1280
BsoBI CYCGRG 5 cut(s) 387, 500, 518, 640, 914
Bsp1286I GDGCHC 2 cut(s) 611, 1438
Bsp143I GATC 6 cut(s) 159, 804, 1252, 1294, 1352, 1461
Bsp19I CCATGG 1 cut(s) 249
BspACI CCGC 3 cut(s) 376, 869, 930
BspANI GGCC 5 cut(s) 666, 721, 919, 1045, 1280
BspFNI CGCG 3 cut(s) 710, 782, 1010
BspMAI CTGCAG 1 cut(s) 957
BspMI ACCTGC 1 cut(s) 380
BspPI GGATC 4 cut(s) 154, 799, 812, 1469
BspQI GCTCTTC 1 cut(s) 695
BspT107I GGYRCC 2 cut(s) 893, 1129
BsrFI RCCGGY 4 cut(s) 919, 964, 1041, 1054
BsrI ACTGG 4 cut(s) 104, 350, 898, 1443
BssAI RCCGGY 4 cut(s) 919, 964, 1041, 1054
BssECI CCNNGG 7 cut(s) 249, 387, 465, 518, 604, 864, 1281
BssMI GATC 6 cut(s) 159, 804, 1252, 1294, 1352, 1461
BssNI GRCGYC 5 cut(s) 456, 573, 681, 699, 755
BssT1I CCWWGG 1 cut(s) 249
Bst2UI CCWGG 3 cut(s) 280, 467, 980
Bst4CI ACNGT 6 cut(s) 47, 223, 290, 526, 765, 790
Bst6I CTCTTC 3 cut(s) 64, 561, 695
BstACI GRCGYC 5 cut(s) 456, 573, 681, 699, 755
BstAPI GCANNNNNTGC 1 cut(s) 1433
BstBAI YACGTR 1 cut(s) 1433
BstC8I GCNNGC 1 cut(s) 1065
BstDSI CCRYGG 1 cut(s) 249
BstF5I GGATG 3 cut(s) 345, 1248, 1275
BstFNI CGCG 3 cut(s) 710, 782, 1010
BstHHI GCGC 1 cut(s) 1010
BstKTI GATC 6 cut(s) 162, 807, 1255, 1297, 1355, 1464
BstMAI GTCTC 2 cut(s) 53, 358
BstMBI GATC 6 cut(s) 159, 804, 1252, 1294, 1352, 1461
BstMCI CGRYCG 1 cut(s) 775
BstMWI GCNNNNNNNGC 5 cut(s) 663, 707, 1051, 1060, 1433
BstNI CCWGG 3 cut(s) 280, 467, 980
BstSFI CTRYAG 2 cut(s) 43, 953
BstSLI GKGCMC 1 cut(s) 1438
BstUI CGCG 3 cut(s) 710, 782, 1010
BstV1I GCAGC 3 cut(s) 1104, 1357, 1439
BstX2I RGATCY 2 cut(s) 804, 1352
BstXI CCANNNNNNTGG 1 cut(s) 1369
BstYI RGATCY 2 cut(s) 804, 1352
BsuRI GGCC 5 cut(s) 666, 721, 919, 1045, 1280
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 1025
BtsCI GGATG 3 cut(s) 345, 1248, 1275
BtsI GCAGTG 1 cut(s) 274
BtsIMutI CAGTG 4 cut(s) 274, 286, 1436, 1471
BveI ACCTGC 1 cut(s) 380
Cac8I GCNNGC 1 cut(s) 1065
CaiI CAGNNNCTG 1 cut(s) 51
CfoI GCGC 1 cut(s) 1010
Cfr10I RCCGGY 4 cut(s) 919, 964, 1041, 1054
Cfr9I CCCGGG 2 cut(s) 387, 518
CseI GACGC 5 cut(s) 464, 581, 670, 707, 763
Csp6I GTAC 7 cut(s) 107, 652, 766, 784, 824, 851, 1130
CspAI ACCGGT 1 cut(s) 964
CviAII CATG 6 cut(s) 152, 250, 538, 598, 1369, 1424
CviQI GTAC 7 cut(s) 107, 652, 766, 784, 824, 851, 1130
DpnI GATC 6 cut(s) 161, 806, 1254, 1296, 1354, 1463
DpnII GATC 6 cut(s) 159, 804, 1252, 1294, 1352, 1461
EaeI YGGCCR 1 cut(s) 1278
Eam1104I CTCTTC 3 cut(s) 64, 561, 695
EarI CTCTTC 3 cut(s) 64, 561, 695
Eco130I CCWWGG 1 cut(s) 249
Eco24I GRGCYC 1 cut(s) 611
Eco47I GGWCC 6 cut(s) 253, 384, 391, 522, 790, 1328
Eco57I CTGAAG 2 cut(s) 585, 992
Eco72I CACGTG 1 cut(s) 1433
Eco88I CYCGRG 5 cut(s) 387, 500, 518, 640, 914
EcoO109I RGGNCCY 1 cut(s) 391
EcoRII CCWGG 3 cut(s) 278, 465, 978
EcoT14I CCWWGG 1 cut(s) 249
EcoT38I GRGCYC 1 cut(s) 611
ErhI CCWWGG 1 cut(s) 249
FaeI CATG 6 cut(s) 155, 253, 541, 601, 1372, 1427
FaiI YATR 9 cut(s) 153, 251, 401, 539, 599, 659, 1370, 1415, 1425
FaqI GGGAC 2 cut(s) 404, 535
FatI CATG 6 cut(s) 151, 249, 537, 597, 1368, 1423
FauI CCCGC 1 cut(s) 862
FblI GTMKAC 1 cut(s) 752
Fnu4HI GCNGC 4 cut(s) 376, 1118, 1346, 1428
FokI GGATG 3 cut(s) 332, 1255, 1282
FriOI GRGCYC 1 cut(s) 611
Fsp4HI GCNGC 4 cut(s) 376, 1118, 1346, 1428
FspBI CTAG 2 cut(s) 1266, 1313
GlaI GCGC 1 cut(s) 1009
GluI GCNGC 4 cut(s) 376, 1118, 1346, 1428
GsaI CCCAGC 1 cut(s) 1196
GsuI CTGGAG 1 cut(s) 87
HaeIII GGCC 5 cut(s) 666, 721, 919, 1045, 1280
HgaI GACGC 5 cut(s) 464, 581, 670, 707, 763
HhaI GCGC 1 cut(s) 1010
Hin1I GRCGYC 5 cut(s) 456, 573, 681, 699, 755
Hin1II CATG 6 cut(s) 155, 253, 541, 601, 1372, 1427
Hin6I GCGC 1 cut(s) 1008
HinP1I GCGC 1 cut(s) 1008
HincII GTYRAC 2 cut(s) 515, 753
HindII GTYRAC 2 cut(s) 515, 753
HindIII AAGCTT 1 cut(s) 1381
HinfI GANTC 4 cut(s) 542, 645, 887, 1420
HphI GGTGA 5 cut(s) 193, 301, 1153, 1217, 1270
Hpy166II GTNNAC 8 cut(s) 272, 515, 753, 786, 886, 903, 925, 1436
Hpy188I TCNGA 7 cut(s) 487, 565, 876, 972, 1035, 1186, 1461
Hpy188III TCNNGA 3 cut(s) 640, 835, 1177
Hpy8I GTNNAC 8 cut(s) 272, 515, 753, 786, 886, 903, 925, 1436
Hpy99I CGWCG 4 cut(s) 511, 701, 757, 803
HpyAV CCTTC 3 cut(s) 35, 464, 628
HpyCH4III ACNGT 6 cut(s) 47, 223, 290, 526, 765, 790
HpyCH4IV ACGT 7 cut(s) 198, 243, 315, 905, 1172, 1236, 1432
HpyCH4V TGCA 6 cut(s) 537, 657, 955, 1397, 1427, 1436
HpyF10VI GCNNNNNNNGC 5 cut(s) 663, 707, 1051, 1060, 1433
HpySE526I ACGT 7 cut(s) 198, 243, 315, 905, 1172, 1236, 1432
Hsp92I GRCGYC 5 cut(s) 456, 573, 681, 699, 755
Hsp92II CATG 6 cut(s) 155, 253, 541, 601, 1372, 1427
HspAI GCGC 1 cut(s) 1008
KpnI GGTACC 1 cut(s) 1133
Kzo9I GATC 6 cut(s) 159, 804, 1252, 1294, 1352, 1461
LguI GCTCTTC 1 cut(s) 695
LmnI GCTCC 6 cut(s) 288, 365, 560, 614, 981, 1088
Lsp1109I GCAGC 3 cut(s) 1104, 1357, 1439
MaeI CTAG 2 cut(s) 1266, 1313
MaeII ACGT 7 cut(s) 198, 243, 315, 905, 1172, 1236, 1432
MaeIII GTNAC 8 cut(s) 199, 244, 622, 668, 759, 1069, 1102, 1217
MalI GATC 6 cut(s) 161, 806, 1254, 1296, 1354, 1463
MboI GATC 6 cut(s) 159, 804, 1252, 1294, 1352, 1461
MboII GAAGA 7 cut(s) 5, 11, 51, 90, 578, 682, 902
MflI RGATCY 2 cut(s) 804, 1352
MhlI GDGCHC 2 cut(s) 611, 1438
MlyI GAGTC 3 cut(s) 536, 881, 1429
MmeI TCCRAC 5 cut(s) 510, 520, 582, 1209, 1439
MseI TTAA 4 cut(s) 321, 590, 725, 1083
MslI CAYNNNNRTG 1 cut(s) 1367
MspA1I CMGCKG 1 cut(s) 1067
MvaI CCWGG 3 cut(s) 280, 467, 980
MvnI CGCG 3 cut(s) 710, 782, 1010
MwoI GCNNNNNNNGC 5 cut(s) 663, 707, 1051, 1060, 1433
NcoI CCATGG 1 cut(s) 249
NdeII GATC 6 cut(s) 159, 804, 1252, 1294, 1352, 1461
NlaIII CATG 6 cut(s) 155, 253, 541, 601, 1372, 1427
NmeAIII GCCGAG 1 cut(s) 1306
NmuCI GTSAC 4 cut(s) 199, 668, 1069, 1217
PaqCI CACCTGC 1 cut(s) 380
PciSI GCTCTTC 1 cut(s) 695
PcsI WCGNNNNNNNCGW 2 cut(s) 761, 1182
PfeI GAWTC 1 cut(s) 645
PflFI GACNNNGTC 1 cut(s) 776
PfoI TCCNGGA 1 cut(s) 978
PinAI ACCGGT 1 cut(s) 964
PkrI GCNGC 4 cut(s) 377, 1119, 1347, 1429
PleI GAGTC 3 cut(s) 536, 881, 1428
PmaCI CACGTG 1 cut(s) 1433
PmlI CACGTG 1 cut(s) 1433
PpsI GAGTC 3 cut(s) 536, 881, 1428
Ppu21I YACGTR 1 cut(s) 1433
PpuMI RGGWCCY 1 cut(s) 391
Psp1406I AACGTT 1 cut(s) 243
Psp5II RGGWCCY 1 cut(s) 391
Psp6I CCWGG 3 cut(s) 278, 465, 978
PspCI CACGTG 1 cut(s) 1433
PspFI CCCAGC 1 cut(s) 1192
PspGI CCWGG 3 cut(s) 278, 465, 978
PspPPI RGGWCCY 1 cut(s) 391
PstI CTGCAG 1 cut(s) 957
PstNI CAGNNNCTG 1 cut(s) 51
PsuI RGATCY 2 cut(s) 804, 1352
PsyI GACNNNGTC 1 cut(s) 776
PvuII CAGCTG 1 cut(s) 1067
RsaI GTAC 7 cut(s) 108, 653, 767, 785, 825, 852, 1131
RsaNI GTAC 7 cut(s) 107, 652, 766, 784, 824, 851, 1130
RseI CAYNNNNRTG 1 cut(s) 1367
SalI GTCGAC 1 cut(s) 751
SapI GCTCTTC 1 cut(s) 695
SaqAI TTAA 4 cut(s) 321, 590, 725, 1083
SatI GCNGC 4 cut(s) 376, 1118, 1346, 1428
Sau3AI GATC 6 cut(s) 159, 804, 1252, 1294, 1352, 1461
ScaI AGTACT 1 cut(s) 825
SchI GAGTC 3 cut(s) 536, 881, 1429
SduI GDGCHC 2 cut(s) 611, 1438
SfcI CTRYAG 2 cut(s) 43, 953
SinI GGWCC 6 cut(s) 253, 384, 391, 522, 790, 1328
SmaI CCCGGG 2 cut(s) 389, 520
SmiMI CAYNNNNRTG 1 cut(s) 1367
SsiI CCGC 3 cut(s) 376, 869, 930
SspMI CTAG 2 cut(s) 1266, 1313
StyI CCWWGG 1 cut(s) 249
TaaI ACNGT 6 cut(s) 47, 223, 290, 526, 765, 790
TaiI ACGT 7 cut(s) 201, 246, 318, 908, 1175, 1239, 1435
TaqI TCGA 5 cut(s) 158, 258, 752, 771, 798
TatI WGTACW 1 cut(s) 823
TauI GCSGC 1 cut(s) 378
TfiI GAWTC 1 cut(s) 645
Tru1I TTAA 4 cut(s) 321, 590, 725, 1083
Tru9I TTAA 4 cut(s) 321, 590, 725, 1083
TscAI CASTG 4 cut(s) 274, 293, 1443, 1471
TseFI GTSAC 4 cut(s) 199, 668, 1069, 1217
TseI GCWGC 3 cut(s) 1117, 1345, 1427
Tsp45I GTSAC 4 cut(s) 199, 668, 1069, 1217
TspDTI ATGAA 5 cut(s) 5, 17, 614, 1052, 1355
TspGWI ACGGA 1 cut(s) 832
TspMI CCCGGG 2 cut(s) 387, 518
TspRI CASTG 4 cut(s) 274, 293, 1443, 1471
Tth111I GACNNNGTC 1 cut(s) 776
VneI GTGCAC 1 cut(s) 1434
VpaK11BI GGWCC 6 cut(s) 253, 384, 391, 522, 790, 1328
XmaI CCCGGG 2 cut(s) 387, 518
XmiI GTMKAC 1 cut(s) 752
XspI CTAG 2 cut(s) 1266, 1313
ZrmI AGTACT 1 cut(s) 825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.