Belongs to the peptidase A1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39710 |
| fragaria_vesca | FvH4_7g22840 |
| malus_domestica | MD01G1136600.v1.1 MD07G1201600.v1.1 |
| prunus_persica | Prupe.2G238200_v2.0.a1 |
| pyrus_communis | pycom01g15730 pycom07g18860 |
| rosa_chinensis | RchiOBHm_Chr1g0368001 |
| rosa_laevigata | RLG00000027248 |
| rosa_roxburghii | Rroxscaffold_4G00288960 |
| rosa_rugosa | Rorug01G0338400 |
| rosa_samantha | Rh1AG345100 Rh1BG307400 Rh1CG323000 Rh1DG339500 |
| rosa_wichuraiana | Rw1G030710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 117 |
| AccB1I | GGYRCC | 1 cut(s) | 117 |
| AccI | GTMKAC | 1 cut(s) | 846 |
| AccII | CGCG | 4 cut(s) | 567, 630, 743, 893 |
| AciI | CCGC | 9 cut(s) | 194, 197, 247, 565, 567, 830, 891, 1094, 1110 |
| AclWI | GGATC | 3 cut(s) | 633, 760, 773 |
| AcoI | YGGCCR | 1 cut(s) | 1004 |
| AcsI | RAATTY | 5 cut(s) | 605, 665, 905, 952, 1208 |
| AcyI | GRCGYC | 1 cut(s) | 534 |
| AfaI | GTAC | 5 cut(s) | 119, 484, 728, 746, 813 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 445, 760, 802, 826, 1002, 1204 |
| AgeI | ACCGGT | 1 cut(s) | 925 |
| AgsI | TTSAA | 3 cut(s) | 35, 271, 457 |
| AjnI | CCWGG | 1 cut(s) | 239 |
| AluBI | AGCT | 6 cut(s) | 142, 235, 260, 388, 757, 1273 |
| AluI | AGCT | 6 cut(s) | 142, 235, 260, 388, 757, 1273 |
| Alw21I | GWGCWC | 1 cut(s) | 237 |
| AlwI | GGATC | 3 cut(s) | 633, 760, 773 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1198 |
| Ama87I | CYCGRG | 3 cut(s) | 461, 850, 1016 |
| AoxI | GGCC | 3 cut(s) | 1004, 1050, 1276 |
| ApeKI | GCWGC | 4 cut(s) | 199, 228, 249, 1078 |
| ApoI | RAATTY | 5 cut(s) | 605, 665, 905, 952, 1208 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 938, 970 |
| AsiGI | ACCGGT | 1 cut(s) | 925 |
| Asp718I | GGTACC | 1 cut(s) | 117 |
| AspA2I | CCTAGG | 1 cut(s) | 1279 |
| AspLEI | GCGC | 1 cut(s) | 895 |
| AspS9I | GGNCC | 9 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878, 1050 |
| AsuC2I | CCSGG | 7 cut(s) | 343, 480, 508, 547, 737, 770, 826 |
| AsuHPI | GGTGA | 4 cut(s) | 34, 154, 199, 1114 |
| AsuII | TTCGAA | 1 cut(s) | 518 |
| AvaI | CYCGRG | 3 cut(s) | 461, 850, 1016 |
| AvaII | GGWCC | 8 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878 |
| AvrII | CCTAGG | 1 cut(s) | 1279 |
| BamHI | GGATCC | 1 cut(s) | 765 |
| BanI | GGYRCC | 1 cut(s) | 117 |
| BanII | GRGCYC | 1 cut(s) | 237 |
| Bbv12I | GWGCWC | 1 cut(s) | 237 |
| BbvCI | CCTCAGC | 1 cut(s) | 1242 |
| BbvI | GCAGC | 4 cut(s) | 211, 236, 240, 1065 |
| BccI | CCATC | 4 cut(s) | 434, 586, 967, 1198 |
| BciT130I | CCWGG | 1 cut(s) | 241 |
| BcnI | CCSGG | 7 cut(s) | 343, 480, 508, 547, 737, 770, 826 |
| BfaI | CTAG | 2 cut(s) | 1227, 1280 |
| BisI | GCNGC | 6 cut(s) | 194, 197, 200, 229, 250, 1079 |
| BlnI | CCTAGG | 1 cut(s) | 1279 |
| BlpI | GCTNAGC | 1 cut(s) | 912 |
| BlsI | GCNGC | 6 cut(s) | 195, 198, 201, 230, 251, 1080 |
| Bme1390I | CCNGG | 8 cut(s) | 241, 343, 480, 508, 547, 737, 770, 826 |
| Bme18I | GGWCC | 8 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878 |
| BmeT110I | CYCGRG | 3 cut(s) | 461, 850, 1016 |
| BmgT120I | GGNCC | 9 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878, 1050 |
| BmiI | GGNNCC | 9 cut(s) | 119, 245, 341, 421, 511, 767, 856, 857, 1051 |
| BmrFI | CCNGG | 8 cut(s) | 241, 343, 480, 508, 547, 737, 770, 826 |
| BmrI | ACTGGG | 2 cut(s) | 305, 853 |
| BmsI | GCATC | 1 cut(s) | 302 |
| BmuI | ACTGGG | 2 cut(s) | 305, 853 |
| BpmI | CTGGAG | 2 cut(s) | 779, 1238 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1242 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 912 |
| Bpu14I | TTCGAA | 1 cut(s) | 518 |
| BpuEI | CTTGAG | 1 cut(s) | 96 |
| BpuMI | CCSGG | 7 cut(s) | 343, 480, 508, 547, 737, 770, 826 |
| BsaHI | GRCGYC | 1 cut(s) | 534 |
| BsaJI | CCNNGG | 5 cut(s) | 210, 565, 825, 964, 1279 |
| BsaWI | WCCGGW | 4 cut(s) | 638, 814, 880, 925 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 90, 120, 128, 158, 407, 437, 768, 798 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 445, 760, 802, 826, 1002, 1204 |
| Bse118I | RCCGGY | 3 cut(s) | 224, 925, 1002 |
| Bse1I | ACTGG | 3 cut(s) | 311, 513, 859 |
| BseBI | CCWGG | 1 cut(s) | 241 |
| BseDI | CCNNGG | 5 cut(s) | 210, 565, 825, 964, 1279 |
| BseGI | GGATG | 2 cut(s) | 293, 1209 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 445, 760, 802, 826, 1002, 1204 |
| BseMII | CTCAG | 2 cut(s) | 926, 1233 |
| BseNI | ACTGG | 3 cut(s) | 311, 513, 859 |
| BseRI | GAGGAG | 2 cut(s) | 29, 313 |
| BseX3I | CGGCCG | 1 cut(s) | 1004 |
| BseXI | GCAGC | 4 cut(s) | 211, 236, 240, 1065 |
| BseYI | CCCAGC | 1 cut(s) | 1153 |
| Bsh1236I | CGCG | 4 cut(s) | 567, 630, 743, 893 |
| Bsh1285I | CGRYCG | 3 cut(s) | 186, 736, 1007 |
| BshFI | GGCC | 3 cut(s) | 1006, 1052, 1278 |
| BshNI | GGYRCC | 1 cut(s) | 117 |
| BshTI | ACCGGT | 1 cut(s) | 925 |
| BsiEI | CGRYCG | 3 cut(s) | 186, 736, 1007 |
| BsiHKAI | GWGCWC | 1 cut(s) | 237 |
| BsiHKCI | CYCGRG | 3 cut(s) | 461, 850, 1016 |
| BslFI | GGGAC | 3 cut(s) | 299, 868, 977 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 445, 760, 802, 826, 1002, 1204 |
| BsmFI | GGGAC | 3 cut(s) | 299, 868, 977 |
| BsnI | GGCC | 3 cut(s) | 1006, 1052, 1278 |
| BsoBI | CYCGRG | 3 cut(s) | 461, 850, 1016 |
| Bsp119I | TTCGAA | 1 cut(s) | 518 |
| Bsp1286I | GDGCHC | 1 cut(s) | 237 |
| Bsp143I | GATC | 5 cut(s) | 171, 625, 765, 1213, 1255 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 912 |
| Bsp19I | CCATGG | 1 cut(s) | 210 |
| Bsp68I | TCGCGA | 1 cut(s) | 630 |
| BspACI | CCGC | 9 cut(s) | 194, 197, 247, 565, 567, 830, 891, 1094, 1110 |
| BspANI | GGCC | 3 cut(s) | 1006, 1052, 1278 |
| BspCNI | CTCAG | 2 cut(s) | 925, 1234 |
| BspFNI | CGCG | 4 cut(s) | 567, 630, 743, 893 |
| BspLI | GGNNCC | 9 cut(s) | 119, 245, 341, 421, 511, 767, 856, 857, 1051 |
| BspPI | GGATC | 3 cut(s) | 633, 760, 773 |
| BspT104I | TTCGAA | 1 cut(s) | 518 |
| BspT107I | GGYRCC | 1 cut(s) | 117 |
| BsrFI | RCCGGY | 3 cut(s) | 224, 925, 1002 |
| BsrI | ACTGG | 3 cut(s) | 311, 513, 859 |
| BssAI | RCCGGY | 3 cut(s) | 224, 925, 1002 |
| BssECI | CCNNGG | 5 cut(s) | 210, 565, 825, 964, 1279 |
| BssMI | GATC | 5 cut(s) | 171, 625, 765, 1213, 1255 |
| BssNI | GRCGYC | 1 cut(s) | 534 |
| BssT1I | CCWWGG | 3 cut(s) | 210, 964, 1279 |
| Bst2UI | CCWGG | 1 cut(s) | 241 |
| Bst4CI | ACNGT | 4 cut(s) | 419, 684, 726, 1030 |
| BstACI | GRCGYC | 1 cut(s) | 534 |
| BstBI | TTCGAA | 1 cut(s) | 518 |
| BstC8I | GCNNGC | 3 cut(s) | 191, 233, 1013 |
| BstDEI | CTNAG | 2 cut(s) | 912, 1242 |
| BstDSI | CCRYGG | 2 cut(s) | 210, 565 |
| BstF5I | GGATG | 2 cut(s) | 293, 1209 |
| BstFNI | CGCG | 4 cut(s) | 567, 630, 743, 893 |
| BstHHI | GCGC | 1 cut(s) | 895 |
| BstKTI | GATC | 5 cut(s) | 174, 628, 768, 1216, 1258 |
| BstMBI | GATC | 5 cut(s) | 171, 625, 765, 1213, 1255 |
| BstMCI | CGRYCG | 3 cut(s) | 186, 736, 1007 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 199, 241, 564, 1012, 1021 |
| BstNI | CCWGG | 1 cut(s) | 241 |
| BstSCI | CCNGG | 8 cut(s) | 239, 341, 478, 506, 545, 735, 768, 824 |
| BstUI | CGCG | 4 cut(s) | 567, 630, 743, 893 |
| BstV1I | GCAGC | 4 cut(s) | 211, 236, 240, 1065 |
| BstX2I | RGATCY | 1 cut(s) | 765 |
| BstYI | RGATCY | 1 cut(s) | 765 |
| BstZI | CGGCCG | 1 cut(s) | 1004 |
| BsuRI | GGCC | 3 cut(s) | 1006, 1052, 1278 |
| BtgI | CCRYGG | 2 cut(s) | 210, 565 |
| BtgZI | GCGATG | 1 cut(s) | 986 |
| BtsCI | GGATG | 2 cut(s) | 293, 1209 |
| BtsIMutI | CAGTG | 1 cut(s) | 1035 |
| BtuMI | TCGCGA | 1 cut(s) | 630 |
| Cac8I | GCNNGC | 3 cut(s) | 191, 233, 1013 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1198 |
| CfoI | GCGC | 1 cut(s) | 895 |
| Cfr10I | RCCGGY | 3 cut(s) | 224, 925, 1002 |
| Cfr13I | GGNCC | 9 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878, 1050 |
| Cfr42I | CCGCGG | 1 cut(s) | 568 |
| CpoI | CGGWCCG | 1 cut(s) | 878 |
| CseI | GACGC | 2 cut(s) | 542, 1042 |
| Csp6I | GTAC | 5 cut(s) | 118, 483, 727, 745, 812 |
| CspAI | ACCGGT | 1 cut(s) | 925 |
| CspI | CGGWCCG | 1 cut(s) | 878 |
| CviAII | CATG | 3 cut(s) | 211, 499, 559 |
| CviQI | GTAC | 5 cut(s) | 118, 483, 727, 745, 812 |
| DdeI | CTNAG | 2 cut(s) | 912, 1242 |
| DpnI | GATC | 5 cut(s) | 173, 627, 767, 1215, 1257 |
| DpnII | GATC | 5 cut(s) | 171, 625, 765, 1213, 1255 |
| EaeI | YGGCCR | 1 cut(s) | 1004 |
| EagI | CGGCCG | 1 cut(s) | 1004 |
| Ecl136II | GAGCTC | 1 cut(s) | 235 |
| EclXI | CGGCCG | 1 cut(s) | 1004 |
| Eco130I | CCWWGG | 3 cut(s) | 210, 964, 1279 |
| Eco24I | GRGCYC | 1 cut(s) | 237 |
| Eco32I | GATATC | 1 cut(s) | 711 |
| Eco47I | GGWCC | 8 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878 |
| Eco52I | CGGCCG | 1 cut(s) | 1004 |
| Eco53kI | GAGCTC | 1 cut(s) | 235 |
| Eco88I | CYCGRG | 3 cut(s) | 461, 850, 1016 |
| EcoICRI | GAGCTC | 1 cut(s) | 235 |
| EcoO109I | RGGNCCY | 1 cut(s) | 855 |
| EcoRI | GAATTC | 1 cut(s) | 905 |
| EcoRII | CCWGG | 1 cut(s) | 239 |
| EcoRV | GATATC | 1 cut(s) | 711 |
| EcoT14I | CCWWGG | 3 cut(s) | 210, 964, 1279 |
| EcoT38I | GRGCYC | 1 cut(s) | 237 |
| ErhI | CCWWGG | 3 cut(s) | 210, 964, 1279 |
| FaeI | CATG | 3 cut(s) | 214, 502, 562 |
| FaiI | YATR | 7 cut(s) | 212, 500, 560, 620, 822, 1135, 1160 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 131, 163, 423, 455 |
| FaqI | GGGAC | 3 cut(s) | 299, 868, 977 |
| FatI | CATG | 3 cut(s) | 210, 498, 558 |
| FauI | CCCGC | 4 cut(s) | 560, 823, 1087, 1103 |
| FblI | GTMKAC | 1 cut(s) | 846 |
| Fnu4HI | GCNGC | 6 cut(s) | 194, 197, 200, 229, 250, 1079 |
| FokI | GGATG | 2 cut(s) | 280, 1216 |
| FriOI | GRGCYC | 1 cut(s) | 237 |
| Fsp4HI | GCNGC | 6 cut(s) | 194, 197, 200, 229, 250, 1079 |
| FspBI | CTAG | 2 cut(s) | 1227, 1280 |
| GlaI | GCGC | 1 cut(s) | 894 |
| GluI | GCNGC | 6 cut(s) | 194, 197, 200, 229, 250, 1079 |
| GsaI | CCCAGC | 1 cut(s) | 1157 |
| GsuI | CTGGAG | 2 cut(s) | 779, 1238 |
| HaeIII | GGCC | 3 cut(s) | 1006, 1052, 1278 |
| HgaI | GACGC | 2 cut(s) | 542, 1042 |
| HhaI | GCGC | 1 cut(s) | 895 |
| Hin1I | GRCGYC | 1 cut(s) | 534 |
| Hin1II | CATG | 3 cut(s) | 214, 502, 562 |
| Hin6I | GCGC | 1 cut(s) | 893 |
| HinP1I | GCGC | 1 cut(s) | 893 |
| HincII | GTYRAC | 1 cut(s) | 847 |
| HindII | GTYRAC | 1 cut(s) | 847 |
| HindIII | AAGCTT | 1 cut(s) | 1271 |
| HinfI | GANTC | 4 cut(s) | 503, 632, 848, 1114 |
| HphI | GGTGA | 4 cut(s) | 34, 154, 199, 1114 |
| Hpy166II | GTNNAC | 3 cut(s) | 847, 864, 886 |
| Hpy188I | TCNGA | 5 cut(s) | 603, 625, 708, 933, 1147 |
| Hpy188III | TCNNGA | 4 cut(s) | 169, 629, 796, 1217 |
| Hpy8I | GTNNAC | 3 cut(s) | 847, 864, 886 |
| Hpy99I | CGWCG | 2 cut(s) | 419, 530 |
| HpyAV | CCTTC | 5 cut(s) | 28, 32, 157, 425, 589 |
| HpyCH4III | ACNGT | 4 cut(s) | 419, 684, 726, 1030 |
| HpyCH4IV | ACGT | 1 cut(s) | 159 |
| HpyCH4V | TGCA | 4 cut(s) | 252, 443, 498, 618 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 199, 241, 564, 1012, 1021 |
| HpyF3I | CTNAG | 2 cut(s) | 912, 1242 |
| HpySE526I | ACGT | 1 cut(s) | 159 |
| Hsp92I | GRCGYC | 1 cut(s) | 534 |
| Hsp92II | CATG | 3 cut(s) | 214, 502, 562 |
| HspAI | GCGC | 1 cut(s) | 893 |
| KflI | GGGWCCC | 1 cut(s) | 855 |
| KpnI | GGTACC | 1 cut(s) | 121 |
| KspI | CCGCGG | 1 cut(s) | 568 |
| Kzo9I | GATC | 5 cut(s) | 171, 625, 765, 1213, 1255 |
| LmnI | GCTCC | 5 cut(s) | 67, 249, 265, 326, 968 |
| Lsp1109I | GCAGC | 4 cut(s) | 211, 236, 240, 1065 |
| LweI | GCATC | 1 cut(s) | 302 |
| MaeI | CTAG | 2 cut(s) | 1227, 1280 |
| MaeII | ACGT | 1 cut(s) | 159 |
| MaeIII | GTNAC | 6 cut(s) | 160, 205, 583, 786, 1030, 1178 |
| MalI | GATC | 5 cut(s) | 173, 627, 767, 1215, 1257 |
| MboI | GATC | 5 cut(s) | 171, 625, 765, 1213, 1255 |
| MboII | GAAGA | 3 cut(s) | 17, 20, 23 |
| MflI | RGATCY | 1 cut(s) | 765 |
| MhlI | GDGCHC | 1 cut(s) | 237 |
| MluCI | AATT | 6 cut(s) | 605, 665, 688, 905, 952, 1208 |
| MlyI | GAGTC | 2 cut(s) | 626, 842 |
| MmeI | TCCRAC | 1 cut(s) | 754 |
| MseI | TTAA | 4 cut(s) | 282, 551, 686, 1288 |
| MspA1I | CMGCKG | 3 cut(s) | 249, 567, 757 |
| MspR9I | CCNGG | 8 cut(s) | 241, 343, 480, 508, 547, 737, 770, 826 |
| MvaI | CCWGG | 1 cut(s) | 241 |
| MvnI | CGCG | 4 cut(s) | 567, 630, 743, 893 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 199, 241, 564, 1012, 1021 |
| NciI | CCSGG | 7 cut(s) | 343, 480, 508, 547, 737, 770, 826 |
| NcoI | CCATGG | 1 cut(s) | 210 |
| NdeII | GATC | 5 cut(s) | 171, 625, 765, 1213, 1255 |
| NlaIII | CATG | 3 cut(s) | 214, 502, 562 |
| NlaIV | GGNNCC | 9 cut(s) | 119, 245, 341, 421, 511, 767, 856, 857, 1051 |
| NmeAIII | GCCGAG | 2 cut(s) | 1032, 1078 |
| NmuCI | GTSAC | 4 cut(s) | 160, 205, 1030, 1178 |
| NruI | TCGCGA | 1 cut(s) | 630 |
| NspV | TTCGAA | 1 cut(s) | 518 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1004 |
| PfeI | GAWTC | 2 cut(s) | 503, 1114 |
| PflFI | GACNNNGTC | 1 cut(s) | 737 |
| PinAI | ACCGGT | 1 cut(s) | 925 |
| PkrI | GCNGC | 6 cut(s) | 195, 198, 201, 230, 251, 1080 |
| PleI | GAGTC | 2 cut(s) | 626, 842 |
| PpsI | GAGTC | 2 cut(s) | 626, 842 |
| PpuMI | RGGWCCY | 1 cut(s) | 855 |
| Psp124BI | GAGCTC | 1 cut(s) | 237 |
| Psp5II | RGGWCCY | 1 cut(s) | 855 |
| Psp6I | CCWGG | 1 cut(s) | 239 |
| PspFI | CCCAGC | 1 cut(s) | 1153 |
| PspGI | CCWGG | 1 cut(s) | 239 |
| PspN4I | GGNNCC | 9 cut(s) | 119, 245, 341, 421, 511, 767, 856, 857, 1051 |
| PspPI | GGNCC | 9 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878, 1050 |
| PspPPI | RGGWCCY | 1 cut(s) | 855 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1198 |
| PsuI | RGATCY | 1 cut(s) | 765 |
| PsyI | GACNNNGTC | 1 cut(s) | 737 |
| PvuII | CAGCTG | 1 cut(s) | 757 |
| RruI | TCGCGA | 1 cut(s) | 630 |
| RsaI | GTAC | 5 cut(s) | 119, 484, 728, 746, 813 |
| RsaNI | GTAC | 5 cut(s) | 118, 483, 727, 745, 812 |
| Rsr2I | CGGWCCG | 1 cut(s) | 878 |
| RsrII | CGGWCCG | 1 cut(s) | 878 |
| SacI | GAGCTC | 1 cut(s) | 237 |
| SacII | CCGCGG | 1 cut(s) | 568 |
| SalI | GTCGAC | 1 cut(s) | 845 |
| SaqAI | TTAA | 4 cut(s) | 282, 551, 686, 1288 |
| SatI | GCNGC | 6 cut(s) | 194, 197, 200, 229, 250, 1079 |
| Sau3AI | GATC | 5 cut(s) | 171, 625, 765, 1213, 1255 |
| Sau96I | GGNCC | 9 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878, 1050 |
| SchI | GAGTC | 2 cut(s) | 626, 842 |
| ScrFI | CCNGG | 8 cut(s) | 241, 343, 480, 508, 547, 737, 770, 826 |
| SduI | GDGCHC | 1 cut(s) | 237 |
| SfaNI | GCATC | 1 cut(s) | 302 |
| Sfr303I | CCGCGG | 1 cut(s) | 568 |
| SfuI | TTCGAA | 1 cut(s) | 518 |
| SgrBI | CCGCGG | 1 cut(s) | 568 |
| SinI | GGWCC | 8 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878 |
| SmlI | CTYRAG | 1 cut(s) | 111 |
| SmoI | CTYRAG | 1 cut(s) | 111 |
| Sse9I | AATT | 6 cut(s) | 605, 665, 688, 905, 952, 1208 |
| SsiI | CCGC | 9 cut(s) | 194, 197, 247, 565, 567, 830, 891, 1094, 1110 |
| SspMI | CTAG | 2 cut(s) | 1227, 1280 |
| SstI | GAGCTC | 1 cut(s) | 237 |
| StyD4I | CCNGG | 8 cut(s) | 239, 341, 478, 506, 545, 735, 768, 824 |
| StyI | CCWWGG | 3 cut(s) | 210, 964, 1279 |
| TaaI | ACNGT | 4 cut(s) | 419, 684, 726, 1030 |
| TaiI | ACGT | 1 cut(s) | 162 |
| TaqI | TCGA | 5 cut(s) | 429, 518, 713, 732, 846 |
| TaqII | GACCGA | 3 cut(s) | 172, 739, 866 |
| TasI | AATT | 6 cut(s) | 605, 665, 688, 905, 952, 1208 |
| TauI | GCSGC | 2 cut(s) | 196, 199 |
| TfiI | GAWTC | 2 cut(s) | 503, 1114 |
| Tru1I | TTAA | 4 cut(s) | 282, 551, 686, 1288 |
| Tru9I | TTAA | 4 cut(s) | 282, 551, 686, 1288 |
| TscAI | CASTG | 1 cut(s) | 1035 |
| TseFI | GTSAC | 4 cut(s) | 160, 205, 1030, 1178 |
| TseI | GCWGC | 4 cut(s) | 199, 228, 249, 1078 |
| Tsp45I | GTSAC | 4 cut(s) | 160, 205, 1030, 1178 |
| TspDTI | ATGAA | 1 cut(s) | 575 |
| TspRI | CASTG | 1 cut(s) | 1035 |
| Tth111I | GACNNNGTC | 1 cut(s) | 737 |
| VpaK11BI | GGWCC | 8 cut(s) | 214, 339, 345, 510, 751, 817, 855, 878 |
| XapI | RAATTY | 5 cut(s) | 605, 665, 905, 952, 1208 |
| XmaJI | CCTAGG | 1 cut(s) | 1279 |
| XmiI | GTMKAC | 1 cut(s) | 846 |
| XspI | CTAG | 2 cut(s) | 1227, 1280 |