Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0001709

Physical Location & Seq

Genomic Coordinates Forward (+)

268751 .. 275468

Gene Structure 6718 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1002500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGATGCACAGGCGACCTCTAGCGAGTGTGAGAGCGAGGGTTTCGTTGCGCTCAATTTCAGATTGGCTTTGTAAATCTCAACCACACTACCATCACCATCACCATCATCATCATGGACCAAGACTTGCTTCTCAAAAACTGGACTCCCCTCGCACTCTTACAACATCTAATGGTCATCAAGTTATGTGGCACGGAGCAGAATCTATTACAAGGTCCGTGCAGATGCAAATTGTTGATGCACTACGCTTGGGTGAGAGGGGCAAAGCTTCAAATATGCTTTTGAATCTTAGCCACGTGAACCATTCCTTAGGAGCTGATGATTTCCTTCATATTCTTAAGTACTGTGCCAGGTCACCTGATCCATTGTTTGTAATGGAGACTTGGAGAGTAATGGATGAAAAGGAGATTACCCTGAATAACTTATGCTCCTTGCTCATGATGCAAGCTCTATGTAAAGGAGGATATTTAGAGGAGGCATTTAAGTTGATAAATTTCCTAGGAGAAAGTCAAGGCATCTATCCAGTTCTACCTATCTACAACAGTTTCTTAAGGGCTTGTGCTAAAATGCAAAGTATGATAAATGCCAACCAGTGTTTGGACTTGATGGAGCATCAAATGGCGGGGAAGAATGAAGTTACATATTCGGAGCTTCTCAAGTTTGCAGTTTGGCAACAAAACCTCCCTGCAGCACATGAAATTTGGGAGGACTATATCAAACACTACAGTCTGAGCATTATACCTCTACGGAAGTTTATTTGGTCCTTTACTAGGTTGGGAGATTTAAAATCTGCGTATGTGACGTTGCAACGTATGGTGGCTTTAATCACCAAGGGAAACACGAATGTTAATAGAACTTCTGATGGAAAGTTGTTTTCTTCAAGATTGGACATTCCTATACCTTCAAATTGTGAATTAAGCTTGGGGAAACTAGATTTGGAGGAGAATGAACTTTCTGTTCCTTCCATATACTGTAAACCTTTGGATGATCATGCTGTTAGTGCAGATCAGTCGACTACTTTTGGCTTGGGAGTTGGAGAACTTGAGAATAATCGGCTAGATATGCTTGATAAACATTTAAGCAAGCCTGTTAAGAAAATTTTGAGATGGTCATTCAATGATGTGATTCATGCTTGTGCACAGTTGAGAAATGATGGTCTGGCAGAGCAGTTAATCCTACAGATGCAAAATTTTGGGTTGCAACCATCCAGCCATACATATGATGGCTTTGTCAGAGCAGTTGCTTCTCAGAGAGGTTTCAGTATTGGAATGGAAATTTTACAAGATATGCAGCAGAGAAATCTGAAGCCATATGATTCCACTCTTGTCACCCTTTCTATAGGTTGCAGCAAAGTGCTAGAACTGAATTTAGCTGAGGCTCTGCTGGATCAAATATCTGAATGTTCATATCCACATCCTTTCAATGCTTTTTTTGCAGCATGTGATACAACGGATCAACCTGAGCGAGCAGTGCAGATGTTGGCTAAAATGAAACAATTAGAAGTTATGCCTAATATTAACACGTACGAGCTGCTGTTTTTATTATTTGGAAACGTGAATGCCCCATATGAAGAGGGCAACATGTTGTCACAGGTGGATGCTGCTAAACGTATCAATGCTATAGAAATGGATATGGCAAGATACGGTATTCAGCACAGTTACTTATCAATGAACAACTTGTTGAAAGCCCTTGGAACAGAGGGGATGATAAGAGAGCTGATCCAGTATTTGCATGTGGCAGAAAATCTTTTTTGTCGTAATAATGTTGATCTGGGAACACCCATCTATAATACGGTGTTGCATTCACTTGTTGAGGCTAAGGAAAGTCAAATGGCAATTAAGATATTTAAGAGTATGAAGTCATTTGGTTTCCCGGCAGATGCTGCGACGTATAATATAATGATTGATTGCTGTAGCATTCTGAAATGTTATAGATCTGCTTCTGCATTGATATCCATGATGTTGCGAGATGGCTTTTATCCGGTAACAGTGACTTACACTGCTCTCATAAAGATTCTGTTGGAAGATGATGACATTGATGAAGCATTGAATCTTTTGGATCAAGCCAGCTCAGAAGGGAACAAACTTGATTCTTTGTTATTCAATACCATTCTCCAAAAAGCCTGTGAAAAGGAATTGATTGAGGCAGTTGAATTAGTAGTTGAATGGATGCACCAAGAAAAGATCCAGCCTGATCCAGCGACCTGCCATTTTGTTTTCTCGGCATATGTGAACTGTGGCTTTCACAGCACAGCCATGGAAGCACTGCAGGTTTTGAGTATGCGTATGATATGCAATGAAGATGGAAGCTTTCCAGAAAAGGCAGAATATGAGGATGTCTTTATATTTGCTGAAGACATGGAAGCGGAATCACGAATAGTACAGCTTTTTGAAGATTCTGAAGAGAACCTTGCTGCTGCCCTTTTGAATTTAAGATGGTGTGCGGTGCTCGGCTTCCCAATTTCTTGGTCACCTAGTGAAAGCCCTTGGGCCAGAAGACTCTCATTTAACTACACTACCAGGAAAGGAGCCGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

845

Amino Acids

95.57

Weight (kDa)

5.7

Isoelectric Point (pI)

42.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	594 - 637	5e-11	PPR repeat family
TPR_24	PF23276	597 - 709	5e-07	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76280 AT1G76280 AT1G76280 AT1G76280 AT1G76280
fragaria_vesca	FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510
malus_domestica	MD08G1002500.v1.1
prunus_persica	Prupe.2G013700_v2.0.a1 Prupe.2G013700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0270441 RchiOBHm_Chr6g0304231
rosa_laevigata	RLG00000011004 RLG00000013792 RLG00000035378
rosa_multiflora	Rmu_sc0009479.1_g000010 Rmu_ssc0000218.1_g000015
rosa_roxburghii	Rroxscaffold_7G00163950 Rroxscaffold_7G00197930
rosa_rugosa	Rorug05G0331600 Rorug05G0331700 Rorug06G0329000
rosa_samantha	Rh5AG395800 Rh6AG173300 Rh6AG442800 Rh6BG177200 Rh6BG459900 Rh6CG173000 Rh6CG455200 Rh6DG165400 Rh6DG442200
rosa_wichuraiana	Rw0G006810 Rw5G037260 Rw6G014750 Rw6G038390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	2210, 2257
AccB7I	CCANNNNNTGG	1 cut(s)	595
AccI	GTMKAC	1 cut(s)	1010
AciI	CCGC	4 cut(s)	620, 2363, 2441, 2529
AclWI	GGATC	7 cut(s)	353, 1392, 1458, 1711, 2064, 2176, 2186
AcsI	RAATTY	7 cut(s)	490, 696, 1095, 1186, 1272, 1363, 2425
AcuI	CTGAAG	3 cut(s)	1322, 2370, 2418
AcvI	CACGTG	1 cut(s)	295
AdeI	CACNNNGTG	1 cut(s)	2474
AfaI	GTAC	3 cut(s)	341, 1523, 2379
AfiI	CCNNNNNNNGG	2 cut(s)	595, 768
AflII	CTTAAG	2 cut(s)	335, 547
AflIII	ACRYGT	2 cut(s)	1518, 1578
AjnI	CCWGG	2 cut(s)	347, 2516
AjuI	GAANNNNNNNTTGG	4 cut(s)	112, 144, 917, 949
Alw21I	GWGCWC	2 cut(s)	1138, 2448
Alw26I	GTCTC	1 cut(s)	371
Alw44I	GTGCAC	1 cut(s)	1134
AlwI	GGATC	7 cut(s)	353, 1392, 1458, 1711, 2064, 2176, 2186
AlwNI	CAGNNNCTG	1 cut(s)	1880
AoxI	GGCC	1 cut(s)	2487
ApaLI	GTGCAC	1 cut(s)	1134
ApeKI	GCWGC	9 cut(s)	686, 1288, 1344, 1433, 1528, 1598, 1880, 2411, 2414
ApoI	RAATTY	7 cut(s)	490, 696, 1095, 1186, 1272, 1363, 2425
AspA2I	CCTAGG	1 cut(s)	496
AspLEI	GCGC	1 cut(s)	51
AspS9I	GGNCC	4 cut(s)	116, 213, 759, 2487
AsuC2I	CCSGG	1 cut(s)	1871
AsuHPI	GGTGA	7 cut(s)	86, 92, 263, 345, 817, 1318, 2460
AvaII	GGWCC	3 cut(s)	116, 213, 759
AvrII	CCTAGG	1 cut(s)	496
AxyI	CCTNAGG	1 cut(s)	307
BaeGI	GKGCMC	1 cut(s)	1138
BbrPI	CACGTG	1 cut(s)	295
BbsI	GAAGAC	2 cut(s)	2358, 2500
Bbv12I	GWGCWC	2 cut(s)	1138, 2448
BbvCI	CCTCAGC	1 cut(s)	1371
BbvI	GCAGC	9 cut(s)	698, 1300, 1356, 1445, 1515, 1585, 1867, 2398, 2401
BcgI	CGANNNNNNTGC	2 cut(s)	990, 1024
BciT130I	CCWGG	2 cut(s)	349, 2518
BclI	TGATCA	1 cut(s)	985
BcnI	CCSGG	1 cut(s)	1871
BcoDI	GTCTC	1 cut(s)	371
BfaI	CTAG	7 cut(s)	20, 497, 768, 929, 1055, 1355, 2472
BfmI	CTRYAG	7 cut(s)	684, 721, 1175, 1335, 1617, 1909, 2264
BfrI	CTTAAG	2 cut(s)	335, 547
BfuAI	ACCTGC	2 cut(s)	2210, 2257
BglII	AGATCT	1 cut(s)	1931
BlnI	CCTAGG	1 cut(s)	496
BmcAI	AGTACT	1 cut(s)	341
Bme1390I	CCNGG	3 cut(s)	349, 1871, 2518
Bme18I	GGWCC	3 cut(s)	116, 213, 759
BmgT120I	GGNCC	4 cut(s)	116, 213, 759, 2487
BmiI	GGNNCC	1 cut(s)	2527
BmrFI	CCNGG	3 cut(s)	349, 1871, 2518
BmsI	GCATC	9 cut(s)	213, 226, 429, 522, 619, 1170, 1585, 1867, 2157
BpiI	GAAGAC	2 cut(s)	2358, 2500
Bpu10I	CCTNAGC	3 cut(s)	1371, 1458, 1815
BpuEI	CTTGAG	2 cut(s)	638, 1061
BpuMI	CCSGG	1 cut(s)	1871
BsaAI	YACGTR	2 cut(s)	295, 1521
BsaJI	CCNNGG	5 cut(s)	496, 828, 1687, 2253, 2483
BsaWI	WCCGGW	1 cut(s)	1978
BsaXI	ACNNNNNCTCC	4 cut(s)	410, 440, 663, 693
Bsc4I	CCNNNNNNNGG	2 cut(s)	595, 768
Bse1I	ACTGG	4 cut(s)	144, 521, 589, 1720
Bse21I	CCTNAGG	1 cut(s)	307
Bse3DI	GCAATG	1 cut(s)	2299
BseBI	CCWGG	2 cut(s)	349, 2518
BseDI	CCNNGG	5 cut(s)	496, 828, 1687, 2253, 2483
BseGI	GGATG	8 cut(s)	400, 988, 1202, 1411, 1600, 1707, 2172, 2338
BseLI	CCNNNNNNNGG	2 cut(s)	595, 768
BseMI	GCAATG	1 cut(s)	2299
BseMII	CTCAG	5 cut(s)	719, 1259, 1362, 1449, 2082
BseNI	ACTGG	4 cut(s)	144, 521, 589, 1720
BseRI	GAGGAG	2 cut(s)	485, 953
BseSI	GKGCMC	1 cut(s)	1138
BseXI	GCAGC	9 cut(s)	698, 1300, 1356, 1445, 1515, 1585, 1867, 2398, 2401
BsgI	GTGCAG	3 cut(s)	239, 1020, 1490
BshFI	GGCC	1 cut(s)	2489
BsiHKAI	GWGCWC	2 cut(s)	1138, 2448
BsiSI	CCGG	2 cut(s)	1871, 1979
BsiWI	CGTACG	1 cut(s)	1521
BslI	CCNNNNNNNGG	2 cut(s)	595, 768
BsmAI	GTCTC	1 cut(s)	371
BsmI	GAATGC	3 cut(s)	1561, 1798, 1914
BsnI	GGCC	1 cut(s)	2489
Bsp1286I	GDGCHC	2 cut(s)	1138, 2448
Bsp19I	CCATGG	1 cut(s)	2253
BspACI	CCGC	4 cut(s)	620, 2363, 2441, 2529
BspANI	GGCC	1 cut(s)	2489
BspCNI	CTCAG	5 cut(s)	720, 1258, 1363, 1450, 2081
BspHI	TCATGA	1 cut(s)	435
BspLI	GGNNCC	1 cut(s)	2527
BspMAI	CTGCAG	2 cut(s)	688, 2268
BspMI	ACCTGC	2 cut(s)	2210, 2257
BspPI	GGATC	7 cut(s)	353, 1392, 1458, 1711, 2064, 2176, 2186
BspTI	CTTAAG	2 cut(s)	335, 547
BsrDI	GCAATG	1 cut(s)	2299
BsrI	ACTGG	4 cut(s)	144, 521, 589, 1720
BssECI	CCNNGG	5 cut(s)	496, 828, 1687, 2253, 2483
BssT1I	CCWWGG	5 cut(s)	496, 828, 1687, 2253, 2483
Bst2UI	CCWGG	2 cut(s)	349, 2518
Bst6I	CTCTTC	2 cut(s)	1563, 2394
BstAFI	CTTAAG	2 cut(s)	335, 547
BstAPI	GCANNNNNTGC	1 cut(s)	1880
BstBAI	YACGTR	2 cut(s)	295, 1521
BstC8I	GCNNGC	4 cut(s)	444, 1082, 1464, 2065
BstDEI	CTNAG	8 cut(s)	287, 307, 728, 1245, 1371, 1458, 1815, 2068
BstDSI	CCRYGG	1 cut(s)	2253
BstEII	GGTNACC	2 cut(s)	351, 2466
BstENI	CCTNNNNNAGG	1 cut(s)	766
BstF5I	GGATG	8 cut(s)	400, 988, 1202, 1411, 1600, 1707, 2172, 2338
BstHHI	GCGC	1 cut(s)	51
BstMAI	GTCTC	1 cut(s)	371
BstMWI	GCNNNNNNNGC	8 cut(s)	439, 998, 1060, 1430, 1468, 1880, 2244, 2258
BstNI	CCWGG	2 cut(s)	349, 2518
BstNSI	RCATGY	3 cut(s)	1440, 1582, 1733
BstPI	GGTNACC	2 cut(s)	351, 2466
BstSCI	CCNGG	3 cut(s)	347, 1869, 2516
BstSFI	CTRYAG	7 cut(s)	684, 721, 1175, 1335, 1617, 1909, 2264
BstSLI	GKGCMC	1 cut(s)	1138
BstV1I	GCAGC	9 cut(s)	698, 1300, 1356, 1445, 1515, 1585, 1867, 2398, 2401
BstV2I	GAAGAC	2 cut(s)	2358, 2500
BstX2I	RGATCY	2 cut(s)	1931, 2181
BstXI	CCANNNNNNTGG	1 cut(s)	2463
BstYI	RGATCY	2 cut(s)	1931, 2181
Bsu36I	CCTNAGG	1 cut(s)	307
BsuRI	GGCC	1 cut(s)	2489
BtgI	CCRYGG	1 cut(s)	2253
BtsCI	GGATG	8 cut(s)	400, 988, 1202, 1411, 1600, 1707, 2172, 2338
BtsI	GCAGTG	3 cut(s)	1473, 1995, 2261
BtsIMutI	CAGTG	5 cut(s)	596, 1473, 1992, 1995, 2261
BveI	ACCTGC	2 cut(s)	2210, 2257
Cac8I	GCNNGC	4 cut(s)	444, 1082, 1464, 2065
CaiI	CAGNNNCTG	1 cut(s)	1880
CciI	TCATGA	1 cut(s)	435
CfoI	GCGC	1 cut(s)	51
Cfr13I	GGNCC	4 cut(s)	116, 213, 759, 2487
Csp6I	GTAC	3 cut(s)	340, 1522, 2378
CspCI	CAANNNNNGTGG	2 cut(s)	167, 202
CviQI	GTAC	3 cut(s)	340, 1522, 2378
DdeI	CTNAG	8 cut(s)	287, 307, 728, 1245, 1371, 1458, 1815, 2068
DraI	TTTAAA	1 cut(s)	783
DraIII	CACNNNGTG	1 cut(s)	2474
Eam1104I	CTCTTC	2 cut(s)	1563, 2394
EarI	CTCTTC	2 cut(s)	1563, 2394
Eco130I	CCWWGG	5 cut(s)	496, 828, 1687, 2253, 2483
Eco32I	GATATC	1 cut(s)	1950
Eco47I	GGWCC	3 cut(s)	116, 213, 759
Eco57I	CTGAAG	3 cut(s)	1322, 2370, 2418
Eco72I	CACGTG	1 cut(s)	295
Eco81I	CCTNAGG	1 cut(s)	307
Eco91I	GGTNACC	2 cut(s)	351, 2466
EcoNI	CCTNNNNNAGG	1 cut(s)	766
EcoO65I	GGTNACC	2 cut(s)	351, 2466
EcoRII	CCWGG	2 cut(s)	347, 2516
EcoRV	GATATC	1 cut(s)	1950
EcoT14I	CCWWGG	5 cut(s)	496, 828, 1687, 2253, 2483
ErhI	CCWWGG	5 cut(s)	496, 828, 1687, 2253, 2483
FalI	AAGNNNNNCTT	4 cut(s)	112, 144, 2391, 2423
FauI	CCCGC	1 cut(s)	613
FauNDI	CATATG	4 cut(s)	1216, 1309, 1564, 2224
FbaI	TGATCA	1 cut(s)	985
FblI	GTMKAC	1 cut(s)	1010
FokI	GGATG	8 cut(s)	407, 995, 1189, 1398, 1607, 1714, 2179, 2345
FspBI	CTAG	7 cut(s)	20, 497, 768, 929, 1055, 1355, 2472
GlaI	GCGC	1 cut(s)	50
HaeIII	GGCC	1 cut(s)	2489
HapII	CCGG	2 cut(s)	1871, 1979
HhaI	GCGC	1 cut(s)	51
Hin6I	GCGC	1 cut(s)	49
HinP1I	GCGC	1 cut(s)	49
HincII	GTYRAC	1 cut(s)	1011
HindII	GTYRAC	1 cut(s)	1011
HindIII	AAGCTT	3 cut(s)	264, 916, 2305
HpaII	CCGG	2 cut(s)	1871, 1979
HphI	GGTGA	7 cut(s)	86, 92, 263, 345, 817, 1318, 2460
Hpy166II	GTNNAC	5 cut(s)	298, 974, 1011, 1136, 2230
Hpy188III	TCNNGA	4 cut(s)	436, 879, 2312, 2370
Hpy8I	GTNNAC	5 cut(s)	298, 974, 1011, 1136, 2230
Hpy99I	CGWCG	1 cut(s)	1888
HpyAV	CCTTC	4 cut(s)	335, 909, 969, 2066
HpyCH4IV	ACGT	7 cut(s)	294, 800, 808, 1520, 1551, 1606, 1886
HpyF10VI	GCNNNNNNNGC	8 cut(s)	439, 998, 1060, 1430, 1468, 1880, 2244, 2258
HpyF3I	CTNAG	8 cut(s)	287, 307, 728, 1245, 1371, 1458, 1815, 2068
HpySE526I	ACGT	7 cut(s)	294, 800, 808, 1520, 1551, 1606, 1886
HspAI	GCGC	1 cut(s)	49
Ksp22I	TGATCA	1 cut(s)	985
LmnI	GCTCC	6 cut(s)	194, 311, 431, 607, 646, 2525
Lsp1109I	GCAGC	9 cut(s)	698, 1300, 1356, 1445, 1515, 1585, 1867, 2398, 2401
LweI	GCATC	9 cut(s)	213, 226, 429, 522, 619, 1170, 1585, 1867, 2157
MaeI	CTAG	7 cut(s)	20, 497, 768, 929, 1055, 1355, 2472
MaeII	ACGT	7 cut(s)	294, 800, 808, 1520, 1551, 1606, 1886
MaeIII	GTNAC	9 cut(s)	351, 634, 796, 1324, 1584, 1655, 1981, 1987, 2466
MboII	GAAGA	9 cut(s)	637, 867, 1580, 2033, 2309, 2363, 2402, 2411, 2505
MflI	RGATCY	2 cut(s)	1931, 2181
MhlI	GDGCHC	2 cut(s)	1138, 2448
MlyI	GAGTC	2 cut(s)	137, 2490
MmeI	TCCRAC	2 cut(s)	1012, 1998
MslI	CAYNNNNRTG	4 cut(s)	111, 1131, 1215, 2252
MspCI	CTTAAG	2 cut(s)	335, 547
MspI	CCGG	2 cut(s)	1871, 1979
MspR9I	CCNGG	3 cut(s)	349, 1871, 2518
Mva1269I	GAATGC	3 cut(s)	1561, 1798, 1914
MvaI	CCWGG	2 cut(s)	349, 2518
MwoI	GCNNNNNNNGC	8 cut(s)	439, 998, 1060, 1430, 1468, 1880, 2244, 2258
NciI	CCSGG	1 cut(s)	1871
NcoI	CCATGG	1 cut(s)	2253
NdeI	CATATG	4 cut(s)	1216, 1309, 1564, 2224
NlaIV	GGNNCC	1 cut(s)	2527
NmeAIII	GCCGAG	2 cut(s)	2198, 2427
NmuCI	GTSAC	6 cut(s)	351, 796, 1324, 1584, 1987, 2466
NspI	RCATGY	3 cut(s)	1440, 1582, 1733
PagI	TCATGA	1 cut(s)	435
PciI	ACATGT	1 cut(s)	1578
PctI	GAATGC	3 cut(s)	1561, 1798, 1914
PfeI	GAWTC	9 cut(s)	200, 283, 1123, 1313, 2011, 2047, 2087, 2366, 2393
Pfl23II	CGTACG	1 cut(s)	1521
PflMI	CCANNNNNTGG	1 cut(s)	595
PleI	GAGTC	2 cut(s)	137, 2490
PmaCI	CACGTG	1 cut(s)	295
PmlI	CACGTG	1 cut(s)	295
PpsI	GAGTC	2 cut(s)	137, 2490
Ppu21I	YACGTR	2 cut(s)	295, 1521
PscI	ACATGT	1 cut(s)	1578
Psp6I	CCWGG	2 cut(s)	347, 2516
PspCI	CACGTG	1 cut(s)	295
PspEI	GGTNACC	2 cut(s)	351, 2466
PspGI	CCWGG	2 cut(s)	347, 2516
PspLI	CGTACG	1 cut(s)	1521
PspN4I	GGNNCC	1 cut(s)	2527
PspPI	GGNCC	4 cut(s)	116, 213, 759, 2487
PstI	CTGCAG	2 cut(s)	688, 2268
PstNI	CAGNNNCTG	1 cut(s)	1880
PsuI	RGATCY	2 cut(s)	1931, 2181
RsaI	GTAC	3 cut(s)	341, 1523, 2379
RsaNI	GTAC	3 cut(s)	340, 1522, 2378
RseI	CAYNNNNRTG	4 cut(s)	111, 1131, 1215, 2252
SalI	GTCGAC	1 cut(s)	1009
Sau96I	GGNCC	4 cut(s)	116, 213, 759, 2487
ScaI	AGTACT	1 cut(s)	341
SchI	GAGTC	2 cut(s)	137, 2490
ScrFI	CCNGG	3 cut(s)	349, 1871, 2518
SduI	GDGCHC	2 cut(s)	1138, 2448
SfaNI	GCATC	9 cut(s)	213, 226, 429, 522, 619, 1170, 1585, 1867, 2157
SfcI	CTRYAG	7 cut(s)	684, 721, 1175, 1335, 1617, 1909, 2264
SinI	GGWCC	3 cut(s)	116, 213, 759
SmiMI	CAYNNNNRTG	4 cut(s)	111, 1131, 1215, 2252
SmlI	CTYRAG	4 cut(s)	335, 547, 653, 1040
SmoI	CTYRAG	4 cut(s)	335, 547, 653, 1040
SsiI	CCGC	4 cut(s)	620, 2363, 2441, 2529
SspI	AATATT	1 cut(s)	1513
SspMI	CTAG	7 cut(s)	20, 497, 768, 929, 1055, 1355, 2472
StyD4I	CCNGG	3 cut(s)	347, 1869, 2516
StyI	CCWWGG	5 cut(s)	496, 828, 1687, 2253, 2483
TaiI	ACGT	7 cut(s)	297, 803, 811, 1523, 1554, 1609, 1889
TaqI	TCGA	1 cut(s)	1010
TatI	WGTACW	2 cut(s)	339, 2377
TauI	GCSGC	1 cut(s)	2531
TfiI	GAWTC	9 cut(s)	200, 283, 1123, 1313, 2011, 2047, 2087, 2366, 2393
TscAI	CASTG	5 cut(s)	596, 1473, 1992, 2002, 2268
TseFI	GTSAC	6 cut(s)	351, 796, 1324, 1584, 1987, 2466
TseI	GCWGC	9 cut(s)	686, 1288, 1344, 1433, 1528, 1598, 1880, 2411, 2414
Tsp45I	GTSAC	6 cut(s)	351, 796, 1324, 1584, 1987, 2466
TspGWI	ACGGA	4 cut(s)	205, 207, 760, 1463
TspRI	CASTG	5 cut(s)	596, 1473, 1992, 2002, 2268
Van91I	CCANNNNNTGG	1 cut(s)	595
Vha464I	CTTAAG	2 cut(s)	335, 547
VneI	GTGCAC	1 cut(s)	1134
VpaK11BI	GGWCC	3 cut(s)	116, 213, 759
XagI	CCTNNNNNAGG	1 cut(s)	766
XapI	RAATTY	7 cut(s)	490, 696, 1095, 1186, 1272, 1363, 2425
XceI	RCATGY	3 cut(s)	1440, 1582, 1733
XcmI	CCANNNNNNNNNTGG	3 cut(s)	110, 592, 1217
XmaJI	CCTAGG	1 cut(s)	496
XmiI	GTMKAC	1 cut(s)	1010
XspI	CTAG	7 cut(s)	20, 497, 768, 929, 1055, 1355, 2472
ZrmI	AGTACT	1 cut(s)	341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.