Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0001709

Physical Location & Seq

Genomic Coordinates Reverse (-)

62960255 .. 62966528

Gene Structure 6274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG442800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGCACAGAGCTCTGGCCAGGATTCCATTGCGCTCCATTGCAGAATCATTTTCACACCTCCACCATGGACGAAGAATTGTTGTTGCTGAGAGACTGGACTATTCTCGAACTCTTACTATTTCAACTGGTCGAGATGTTTTATGGAATGGAGCAGAATCAACTACGATGAATTTGCAGATACAAATTGTTAAGGCTCTGAAATTGGGTAAAAGAGGCGAAGCCTCCAATCTTCTTTTGAGTCTAGGCCAGGGAAATGACGTTAAAGGAGCTGATGATTTCATGCATATTCTAAAGTACTGTGCCACGTCACCTGATCCTTTGTTTGTCATGGAAGCTTGGACAATAATGGATGAGAAAGAGATTAGTCTGAATAGCCTTTGCTCCGCACTAATGGTGGAAGCTCTATGTAATGGAGGATACTTGGAGGAGGCATTAAAGTTGATAAATTTTCTTAAAGAAAGTCATGGTATCTATCCGGTTCTACATGTCTACAACACTTTTTTGAAAGCTTGTACCAAAATGCAAAGTATGGTTTATGCCAATCAGTGTTTGGAATTGATGGATCGGCGAAAGGTGGGGAAGAATGAAGTTACATATGCACTGCTTCTCAAGCTTGCAGTTTGGCAACAAAACCTGTCTGTAGCCCATGAAGTTTGGAAGGACTATATCAAACACTACAGTCTGAGCATTATCCCTCTGCAAAAGTTTCTTTTGTCCTTTAGTAAGTTGGGAGATTTAAAATCTGCATGCAAGACATTGCAATATATGGTGGCTTTAGTCATCAGGGGAAAGGCTTCTGTTAATAAATCTATTAAGGGAAAGTTGTATTCTTCAGGATTGGACATTCCTATACCTTTGAACTGTGAATTAGGCTTGAAGAAACTTAATTTGAAGGAGAATGAACAGTCTGTCCCTTCCAGATACTGCGAGAATTTGGATGGCCATGTTGTTTTTGTGGATCAATGCACTAGTTTTGGCTTGGGTTTTGGAGAAACTAAGAGTGTTCCAGCGGATGGTCTTAATATTGATATAAGTACTCCTGTTATGGAGCTTTTGAGATGTTCGTTCACGAACTTGATATATGCTTGTGCAGAATTAAGAAATGGTGGCCTGGCTGAGCAGTTAGTCCTACAGATGCAAAAATTGGGGTTTCAAATAAATAGCCATGTGTACGATGGCTTAATCAGAGCAATTGTTCCAGAAAGAGGTTTCAGCAGTGGGATGGAAATTTTGAAAAGTATGCAGCAGAGAAATTTAAAGCCATATGATCGCACTCTTGCAACCCTTTCAATAGGTTGTAGCAAGGCATTAGAATTGGGTTTAGCTGAGACTCTACTGGATCAAATATCTGTGTATTCACATCCACATGCTTTTAATGCTTTTCTTGCAGCATGTGACATTATGGATCAACCTGAAAATGCCGTGCTGATGCTAGCTAAAATGAAACATCTACAAGTCACGCCAAATATATGGACATATGAGCAGCTGTTTTCCTTATTTGGTAACGTGAATGCCCCATATGAAGAGGGCAACATGTTGTCACAGGTAGATGCTGCTAAACGGATTAAAGCTATAGAAATGGATATGGCGAACTATGGCATTCAGCACAGTTTTTTGTCAATGAATAACTTGCTGAAAGCCCTTGGAGCAGAAGGGATGACGAGAGAGCTGATCCATTATTTACATGTGGCAGAGAATCTTTTTTGTCGTAATCACATTTATCTGGGAACACCTATCTATAATACGGTGTTGCATTCACTTGTTGAGAGTGAGGAAAGCCAAATGGCAATTAAGATGTTTAAAAACATGAAGTCATGTGGTGTCCCAGCAGATGCTGCAACTTATACTATAATGATCGAGTGTTGTAAAATTCTCAGATGTTACAGATCTGCTTGTGCATTGGTTTCTATGATGTTGCGAGATGGCTTTTACCCTGTAACAATAACTTACACTGCTCTCATAAAGACTTTGTTGGAAGATGATATCATTGATGAAGCACTGAATCTTTTGGATCAAGCCAGCTCAGAAGGGAATAAACTTGATACTTTAGTTTTCAATACCATTCTTCGAAAAGCCTGTGAAAAGGAACTGATTGATGTAGTTGAGTTTCTTGTTGAGTGGATGCACCAAGAAAAAATCCGGCCTGATTCAGGGACGTGCTCTTGTGTTTTCACTGCATATACGAACTGTGGTTTTTACAGCACAGCCATGGAAGCATTGCAGGTTTTGAGTATGCGTATAATATGTGACGAAGATGGAAGCTGTTCAGAAAAGAGAAAATTTGAGGACGACTATATCTTTGCTGAAGACAAGGGAGCTGAATCCCATATAATCCAGCATTTTAAAGATTCTAAAGAGGACTTGGCTGTTGCCCTACTGAATTTAAGATGGTGCGCGGTGCTTGGCTTCCCAATTTCTTGGTTGCCTGATCAAAGCCCGTGGGCAAAAAGACTCTCAACTAACTATACTGCCAGGATAGGAGCTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

829

Amino Acids

93.05

Weight (kDa)

6.22

Isoelectric Point (pI)

40.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	579 - 622	3e-11	PPR repeat family
TPR_24	PF23276	582 - 692	2e-06	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76280 AT1G76280 AT1G76280 AT1G76280 AT1G76280
fragaria_vesca	FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510
malus_domestica	MD08G1002500.v1.1
prunus_persica	Prupe.2G013700_v2.0.a1 Prupe.2G013700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0270441 RchiOBHm_Chr6g0304231
rosa_laevigata	RLG00000011004 RLG00000013792 RLG00000035378
rosa_multiflora	Rmu_sc0009479.1_g000010 Rmu_ssc0000218.1_g000015
rosa_roxburghii	Rroxscaffold_7G00163950 Rroxscaffold_7G00197930
rosa_rugosa	Rorug05G0331600 Rorug05G0331700 Rorug06G0329000
rosa_samantha	Rh5AG395800 Rh6AG173300 Rh6AG442800 Rh6BG177200 Rh6BG459900 Rh6CG173000 Rh6CG455200 Rh6DG165400 Rh6DG442200
rosa_wichuraiana	Rw0G006810 Rw5G037260 Rw6G014750 Rw6G038390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2212
AccB7I	CCANNNNNTGG	1 cut(s)	1013
AccI	GTMKAC	1 cut(s)	489
AccII	CGCG	1 cut(s)	2396
AciI	CCGC	3 cut(s)	384, 1010, 2396
AclWI	GGATC	7 cut(s)	308, 570, 966, 1347, 1413, 1666, 2019
AcoI	YGGCCR	2 cut(s)	15, 940
AcsI	RAATTY	8 cut(s)	169, 445, 931, 1227, 1252, 1869, 2279, 2380
AcuI	CTGAAG	2 cut(s)	816, 2325
AfaI	GTAC	4 cut(s)	296, 514, 1036, 1172
AfiI	CCNNNNNNNGG	3 cut(s)	1013, 1205, 2150
AflIII	ACRYGT	3 cut(s)	484, 1533, 1684
AgsI	TTSAA	9 cut(s)	123, 505, 859, 877, 892, 1154, 1234, 1290, 2056
AhlI	ACTAGT	1 cut(s)	968
AjiI	CACGTC	2 cut(s)	306, 2157
AjnI	CCWGG	4 cut(s)	17, 246, 1110, 2471
AloI	GAACNNNNNNTCC	2 cut(s)	894, 926
Alw21I	GWGCWC	2 cut(s)	13, 2162
Alw26I	GTCTC	2 cut(s)	85, 1322
AlwI	GGATC	7 cut(s)	308, 570, 966, 1347, 1413, 1666, 2019
AlwNI	CAGNNNCTG	2 cut(s)	924, 1835
AoxI	GGCC	5 cut(s)	15, 244, 940, 1108, 2141
ApeKI	GCWGC	5 cut(s)	1243, 1388, 1483, 1553, 1835
ApoI	RAATTY	8 cut(s)	169, 445, 931, 1227, 1252, 1869, 2279, 2380
ArsI	GACNNNNNNTTYG	2 cut(s)	2282, 2314
Asp700I	GAANNNNTTC	2 cut(s)	793, 2263
AspLEI	GCGC	2 cut(s)	33, 2396
AsuHPI	GGTGA	1 cut(s)	300
AsuII	TTCGAA	1 cut(s)	2068
AsuNHI	GCTAGC	1 cut(s)	1432
BaeI	ACNNNNGTAYC	2 cut(s)	2034, 2067
BalI	TGGCCA	2 cut(s)	17, 942
BanII	GRGCYC	1 cut(s)	13
BbsI	GAAGAC	1 cut(s)	2313
Bbv12I	GWGCWC	2 cut(s)	13, 2162
BbvI	GCAGC	5 cut(s)	1255, 1400, 1495, 1540, 1822
BccI	CCATC	8 cut(s)	553, 932, 1007, 1169, 1216, 1916, 2249, 2382
BceAI	ACGGC	1 cut(s)	1406
BcgI	CGANNNNNNTGC	2 cut(s)	154, 188
BciT130I	CCWGG	4 cut(s)	19, 248, 1112, 2473
BciVI	GTATCC	1 cut(s)	410
BclI	TGATCA	1 cut(s)	2428
BcoDI	GTCTC	2 cut(s)	85, 1322
BcuI	ACTAGT	1 cut(s)	968
BfaI	CTAG	3 cut(s)	242, 969, 1433
BfmI	CTRYAG	4 cut(s)	639, 676, 1130, 1572
BfuAI	ACCTGC	1 cut(s)	2212
BfuI	GTATCC	1 cut(s)	410
BglII	AGATCT	1 cut(s)	1886
BisI	GCNGC	5 cut(s)	1244, 1389, 1484, 1554, 1836
BlpI	GCTNAGC	1 cut(s)	1116
BlsI	GCNGC	5 cut(s)	1245, 1390, 1485, 1555, 1837
BmcAI	AGTACT	2 cut(s)	296, 1036
Bme1390I	CCNGG	4 cut(s)	19, 248, 1112, 2473
BmgBI	CACGTC	2 cut(s)	306, 2157
BmrFI	CCNGG	4 cut(s)	19, 248, 1112, 2473
BmsI	GCATC	5 cut(s)	1125, 1419, 1540, 1822, 2112
BmtI	GCTAGC	1 cut(s)	1436
BpiI	GAAGAC	1 cut(s)	2313
Bpu1102I	GCTNAGC	1 cut(s)	1116
Bpu14I	TTCGAA	1 cut(s)	2068
BpuEI	CTTGAG	1 cut(s)	593
BsaJI	CCNNGG	5 cut(s)	64, 247, 1642, 2208, 2438
BsaWI	WCCGGW	1 cut(s)	475
Bsc4I	CCNNNNNNNGG	3 cut(s)	1013, 1205, 2150
Bse1I	ACTGG	3 cut(s)	99, 130, 1341
Bse3DI	GCAATG	4 cut(s)	26, 36, 755, 2216
BseBI	CCWGG	4 cut(s)	19, 248, 1112, 2473
BseDI	CCNNGG	5 cut(s)	64, 247, 1642, 2208, 2438
BseGI	GGATG	7 cut(s)	355, 943, 1018, 1227, 1360, 1662, 2127
BseLI	CCNNNNNNNGG	3 cut(s)	1013, 1205, 2150
BseMI	GCAATG	4 cut(s)	26, 36, 755, 2216
BseMII	CTCAG	6 cut(s)	78, 674, 1107, 1317, 1888, 2037
BseNI	ACTGG	3 cut(s)	99, 130, 1341
BseRI	GAGGAG	1 cut(s)	440
BseXI	GCAGC	5 cut(s)	1255, 1400, 1495, 1540, 1822
BseYI	CCCAGC	1 cut(s)	1825
BsgI	GTGCAG	1 cut(s)	1110
Bsh1236I	CGCG	1 cut(s)	2396
BshFI	GGCC	5 cut(s)	17, 246, 942, 1110, 2143
BsiHKAI	GWGCWC	2 cut(s)	13, 2162
BsiSI	CCGG	2 cut(s)	476, 2140
BslFI	GGGAC	3 cut(s)	896, 1808, 2167
BslI	CCNNNNNNNGG	3 cut(s)	1013, 1205, 2150
BsmAI	GTCTC	2 cut(s)	85, 1322
BsmFI	GGGAC	3 cut(s)	896, 1808, 2167
BsmI	GAATGC	3 cut(s)	1516, 1599, 1753
BsnI	GGCC	5 cut(s)	17, 246, 942, 1110, 2143
Bsp119I	TTCGAA	1 cut(s)	2068
Bsp1286I	GDGCHC	2 cut(s)	13, 2162
Bsp1720I	GCTNAGC	1 cut(s)	1116
Bsp19I	CCATGG	2 cut(s)	64, 2208
BspACI	CCGC	3 cut(s)	384, 1010, 2396
BspANI	GGCC	5 cut(s)	17, 246, 942, 1110, 2143
BspCNI	CTCAG	6 cut(s)	79, 675, 1108, 1318, 1887, 2036
BspFNI	CGCG	1 cut(s)	2396
BspMI	ACCTGC	1 cut(s)	2212
BspOI	GCTAGC	1 cut(s)	1436
BspPI	GGATC	7 cut(s)	308, 570, 966, 1347, 1413, 1666, 2019
BspT104I	TTCGAA	1 cut(s)	2068
BsrDI	GCAATG	4 cut(s)	26, 36, 755, 2216
BsrI	ACTGG	3 cut(s)	99, 130, 1341
BssECI	CCNNGG	5 cut(s)	64, 247, 1642, 2208, 2438
BssT1I	CCWWGG	3 cut(s)	64, 1642, 2208
Bst2UI	CCWGG	4 cut(s)	19, 248, 1112, 2473
Bst4CI	ACNGT	7 cut(s)	299, 680, 863, 906, 1610, 1747, 2189
Bst6I	CTCTTC	1 cut(s)	1518
BstAPI	GCANNNNNTGC	1 cut(s)	1835
BstBI	TTCGAA	1 cut(s)	2068
BstC8I	GCNNGC	4 cut(s)	615, 748, 1434, 2020
BstDEI	CTNAG	7 cut(s)	87, 683, 996, 1116, 1326, 1874, 2023
BstDSI	CCRYGG	3 cut(s)	64, 2208, 2438
BstENI	CCTNNNNNAGG	1 cut(s)	2148
BstF5I	GGATG	7 cut(s)	355, 943, 1018, 1227, 1360, 1662, 2127
BstFNI	CGCG	1 cut(s)	2396
BstHHI	GCGC	2 cut(s)	33, 2396
BstMAI	GTCTC	2 cut(s)	85, 1322
BstMWI	GCNNNNNNNGC	6 cut(s)	610, 1376, 1385, 1646, 1835, 2213
BstNI	CCWGG	4 cut(s)	19, 248, 1112, 2473
BstNSI	RCATGY	6 cut(s)	488, 750, 1370, 1395, 1537, 1688
BstSCI	CCNGG	4 cut(s)	17, 246, 1110, 2471
BstSFI	CTRYAG	4 cut(s)	639, 676, 1130, 1572
BstUI	CGCG	1 cut(s)	2396
BstV1I	GCAGC	5 cut(s)	1255, 1400, 1495, 1540, 1822
BstV2I	GAAGAC	1 cut(s)	2313
BstX2I	RGATCY	1 cut(s)	1886
BstXI	CCANNNNNNTGG	2 cut(s)	1470, 2418
BstYI	RGATCY	1 cut(s)	1886
BsuI	GTATCC	1 cut(s)	410
BsuRI	GGCC	5 cut(s)	17, 246, 942, 1110, 2143
BtgI	CCRYGG	3 cut(s)	64, 2208, 2438
BtrI	CACGTC	2 cut(s)	306, 2157
BtsCI	GGATG	7 cut(s)	355, 943, 1018, 1227, 1360, 1662, 2127
BtsI	GCAGTG	4 cut(s)	599, 1222, 1950, 2172
BtsIMutI	CAGTG	6 cut(s)	551, 599, 1222, 1950, 1997, 2172
BveI	ACCTGC	1 cut(s)	2212
Cac8I	GCNNGC	4 cut(s)	615, 748, 1434, 2020
CaiI	CAGNNNCTG	2 cut(s)	924, 1835
CfoI	GCGC	2 cut(s)	33, 2396
Csp6I	GTAC	4 cut(s)	295, 513, 1035, 1171
CspCI	CAANNNNNGTGG	2 cut(s)	2420, 2455
CviQI	GTAC	4 cut(s)	295, 513, 1035, 1171
DdeI	CTNAG	7 cut(s)	87, 683, 996, 1116, 1326, 1874, 2023
DraI	TTTAAA	4 cut(s)	738, 1257, 1801, 2344
EaeI	YGGCCR	2 cut(s)	15, 940
Eam1104I	CTCTTC	1 cut(s)	1518
EarI	CTCTTC	1 cut(s)	1518
Ecl136II	GAGCTC	1 cut(s)	11
Eco130I	CCWWGG	3 cut(s)	64, 1642, 2208
Eco24I	GRGCYC	1 cut(s)	13
Eco32I	GATATC	1 cut(s)	1984
Eco53kI	GAGCTC	1 cut(s)	11
Eco57I	CTGAAG	2 cut(s)	816, 2325
EcoICRI	GAGCTC	1 cut(s)	11
EcoNI	CCTNNNNNAGG	1 cut(s)	2148
EcoRII	CCWGG	4 cut(s)	17, 246, 1110, 2471
EcoRV	GATATC	1 cut(s)	1984
EcoT14I	CCWWGG	3 cut(s)	64, 1642, 2208
EcoT22I	ATGCAT	1 cut(s)	285
EcoT38I	GRGCYC	1 cut(s)	13
ErhI	CCWWGG	3 cut(s)	64, 1642, 2208
FaqI	GGGAC	3 cut(s)	896, 1808, 2167
FauNDI	CATATG	4 cut(s)	595, 1264, 1477, 1519
FbaI	TGATCA	1 cut(s)	2428
FblI	GTMKAC	1 cut(s)	489
Fnu4HI	GCNGC	5 cut(s)	1244, 1389, 1484, 1554, 1836
FokI	GGATG	7 cut(s)	362, 950, 1025, 1234, 1347, 1669, 2134
FriOI	GRGCYC	1 cut(s)	13
Fsp4HI	GCNGC	5 cut(s)	1244, 1389, 1484, 1554, 1836
FspBI	CTAG	3 cut(s)	242, 969, 1433
GlaI	GCGC	2 cut(s)	32, 2395
GluI	GCNGC	5 cut(s)	1244, 1389, 1484, 1554, 1836
GsaI	CCCAGC	1 cut(s)	1829
HaeIII	GGCC	5 cut(s)	17, 246, 942, 1110, 2143
HapII	CCGG	2 cut(s)	476, 2140
HhaI	GCGC	2 cut(s)	33, 2396
Hin6I	GCGC	2 cut(s)	31, 2394
HinP1I	GCGC	2 cut(s)	31, 2394
HindIII	AAGCTT	3 cut(s)	333, 507, 611
HpaII	CCGG	2 cut(s)	476, 2140
HphI	GGTGA	1 cut(s)	300
Hpy166II	GTNNAC	3 cut(s)	490, 1068, 1171
Hpy188I	TCNGA	7 cut(s)	198, 369, 684, 1187, 1877, 2026, 2269
Hpy188III	TCNNGA	6 cut(s)	105, 131, 834, 918, 1069, 1199
Hpy8I	GTNNAC	3 cut(s)	490, 1068, 1171
HpyAV	CCTTC	5 cut(s)	652, 886, 924, 1646, 2021
HpyCH4III	ACNGT	7 cut(s)	299, 680, 863, 906, 1610, 1747, 2189
HpyCH4IV	ACGT	4 cut(s)	258, 305, 1506, 2156
HpyF10VI	GCNNNNNNNGC	6 cut(s)	610, 1376, 1385, 1646, 1835, 2213
HpyF3I	CTNAG	7 cut(s)	87, 683, 996, 1116, 1326, 1874, 2023
HpySE526I	ACGT	4 cut(s)	258, 305, 1506, 2156
HspAI	GCGC	2 cut(s)	31, 2394
Ksp22I	TGATCA	1 cut(s)	2428
LmnI	GCTCC	8 cut(s)	38, 149, 266, 386, 1048, 1646, 2315, 2480
Lsp1109I	GCAGC	5 cut(s)	1255, 1400, 1495, 1540, 1822
LweI	GCATC	5 cut(s)	1125, 1419, 1540, 1822, 2112
MaeI	CTAG	3 cut(s)	242, 969, 1433
MaeII	ACGT	4 cut(s)	258, 305, 1506, 2156
MaeIII	GTNAC	9 cut(s)	306, 589, 1394, 1456, 1502, 1539, 1880, 1936, 2246
MfeI	CAATTG	1 cut(s)	1191
MflI	RGATCY	1 cut(s)	1886
MhlI	GDGCHC	2 cut(s)	13, 2162
MlsI	TGGCCA	2 cut(s)	17, 942
MluNI	TGGCCA	2 cut(s)	17, 942
MlyI	GAGTC	3 cut(s)	247, 1324, 2445
MmeI	TCCRAC	1 cut(s)	1953
Mox20I	TGGCCA	2 cut(s)	17, 942
Mph1103I	ATGCAT	1 cut(s)	285
MroXI	GAANNNNTTC	2 cut(s)	793, 2263
MscI	TGGCCA	2 cut(s)	17, 942
MslI	CAYNNNNRTG	2 cut(s)	1365, 2207
Msp20I	TGGCCA	2 cut(s)	17, 942
MspA1I	CMGCKG	2 cut(s)	1010, 1486
MspI	CCGG	2 cut(s)	476, 2140
MspR9I	CCNGG	4 cut(s)	19, 248, 1112, 2473
MunI	CAATTG	1 cut(s)	1191
Mva1269I	GAATGC	3 cut(s)	1516, 1599, 1753
MvaI	CCWGG	4 cut(s)	19, 248, 1112, 2473
MvnI	CGCG	1 cut(s)	2396
MwoI	GCNNNNNNNGC	6 cut(s)	610, 1376, 1385, 1646, 1835, 2213
NcoI	CCATGG	2 cut(s)	64, 2208
NdeI	CATATG	4 cut(s)	595, 1264, 1477, 1519
NheI	GCTAGC	1 cut(s)	1432
NmuCI	GTSAC	5 cut(s)	306, 1394, 1456, 1539, 2246
NsiI	ATGCAT	1 cut(s)	285
NspI	RCATGY	6 cut(s)	488, 750, 1370, 1395, 1537, 1688
NspV	TTCGAA	1 cut(s)	2068
PaeI	GCATGC	1 cut(s)	750
PciI	ACATGT	3 cut(s)	484, 1533, 1684
PctI	GAATGC	3 cut(s)	1516, 1599, 1753
PdmI	GAANNNNTTC	2 cut(s)	793, 2263
PfeI	GAWTC	8 cut(s)	22, 44, 155, 1696, 2002, 2147, 2321, 2348
PflMI	CCANNNNNTGG	1 cut(s)	1013
PkrI	GCNGC	5 cut(s)	1245, 1390, 1485, 1555, 1837
PleI	GAGTC	3 cut(s)	246, 1324, 2445
PpsI	GAGTC	3 cut(s)	246, 1324, 2445
PscI	ACATGT	3 cut(s)	484, 1533, 1684
Psp124BI	GAGCTC	1 cut(s)	13
Psp6I	CCWGG	4 cut(s)	17, 246, 1110, 2471
PspFI	CCCAGC	1 cut(s)	1825
PspGI	CCWGG	4 cut(s)	17, 246, 1110, 2471
PstNI	CAGNNNCTG	2 cut(s)	924, 1835
PsuI	RGATCY	1 cut(s)	1886
PvuII	CAGCTG	1 cut(s)	1486
RsaI	GTAC	4 cut(s)	296, 514, 1036, 1172
RsaNI	GTAC	4 cut(s)	295, 513, 1035, 1171
RseI	CAYNNNNRTG	2 cut(s)	1365, 2207
SacI	GAGCTC	1 cut(s)	13
SatI	GCNGC	5 cut(s)	1244, 1389, 1484, 1554, 1836
ScaI	AGTACT	2 cut(s)	296, 1036
SchI	GAGTC	3 cut(s)	247, 1324, 2445
ScrFI	CCNGG	4 cut(s)	19, 248, 1112, 2473
SduI	GDGCHC	2 cut(s)	13, 2162
SfaNI	GCATC	5 cut(s)	1125, 1419, 1540, 1822, 2112
SfcI	CTRYAG	4 cut(s)	639, 676, 1130, 1572
SfuI	TTCGAA	1 cut(s)	2068
SmiMI	CAYNNNNRTG	2 cut(s)	1365, 2207
SmlI	CTYRAG	1 cut(s)	608
SmoI	CTYRAG	1 cut(s)	608
SpeI	ACTAGT	1 cut(s)	968
SphI	GCATGC	1 cut(s)	750
SsiI	CCGC	3 cut(s)	384, 1010, 2396
SspI	AATATT	1 cut(s)	1024
SspMI	CTAG	3 cut(s)	242, 969, 1433
SstI	GAGCTC	1 cut(s)	13
StyD4I	CCNGG	4 cut(s)	17, 246, 1110, 2471
StyI	CCWWGG	3 cut(s)	64, 1642, 2208
TaaI	ACNGT	7 cut(s)	299, 680, 863, 906, 1610, 1747, 2189
TaiI	ACGT	4 cut(s)	261, 308, 1509, 2159
TaqI	TCGA	4 cut(s)	106, 130, 1857, 2068
TatI	WGTACW	2 cut(s)	294, 1034
TfiI	GAWTC	8 cut(s)	22, 44, 155, 1696, 2002, 2147, 2321, 2348
TscAI	CASTG	6 cut(s)	551, 606, 1222, 1957, 2004, 2179
TseFI	GTSAC	5 cut(s)	306, 1394, 1456, 1539, 2246
TseI	GCWGC	5 cut(s)	1243, 1388, 1483, 1553, 1835
Tsp45I	GTSAC	5 cut(s)	306, 1394, 1456, 1539, 2246
TspGWI	ACGGA	1 cut(s)	1576
TspRI	CASTG	6 cut(s)	551, 606, 1222, 1957, 2004, 2179
Van91I	CCANNNNNTGG	1 cut(s)	1013
XagI	CCTNNNNNAGG	1 cut(s)	2148
XapI	RAATTY	8 cut(s)	169, 445, 931, 1227, 1252, 1869, 2279, 2380
XceI	RCATGY	6 cut(s)	488, 750, 1370, 1395, 1537, 1688
XcmI	CCANNNNNNNNNTGG	2 cut(s)	547, 1172
XmiI	GTMKAC	1 cut(s)	489
XmnI	GAANNNNTTC	2 cut(s)	793, 2263
XspI	CTAG	3 cut(s)	242, 969, 1433
ZrmI	AGTACT	2 cut(s)	296, 1036
Zsp2I	ATGCAT	1 cut(s)	285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.