Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001709

Physical Location & Seq

Genomic Coordinates Forward (+)

27543823 .. 27547923

Gene Structure 4101 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G014750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGCAAAGTATGGTTTATGCCAATCAGTGTTTGGAATTGATGGAGCGACAAAAGGTGGGGAAGAATGAAGTTACATATGCACTGCTTCTCAAGCTTGCAGTTTGGCAACAAAACCTGTCTGTAGCCCGTGAACTTTGGAAGGACTATATCAAACACTACAGTCTGAGCATTATCCCTCTGCAAAAGTTTCTTTTGTCCTTTAGTAAGTTGGGAGATTTAAAATCTGCATGCAAGACATTGCAATATATGGTGGCTTTAGTCATCAGGGGAAAGGCTTCTGTTAATAAATCTATTAAGGGAAAGTTGTATTCTTCAAGATTGGACATTCCTATACCTTTGAACTGCGAATTAGGCTTGAAGAAACTTAATTTGGAGGAGAATGAACAGTCTGTCCCTTCCAGATACTGCGAGAATTTGGATGGCCATGTTGTTAGTGCGGATCAATGCACTAGTTTTGGCTTGGGTATTGGAGAAACTAAGAGTGTTCCAGCGGATGGTTTTAATATTGATATAAGTACTCCTGTTATGGAGCTTTTGAGATGTTCGTACACGAACTTGATATATGCTTGTGCAGAATTAAGAAATGGTGGCCTGGCTGAGCAGTTAGTCCTACAGATGCAAAAATTGGGGTTTCAAATAAATAGCCATGTGTATGATGGCTTAATCAGAGCAATTGTTCCAGAAAGAGGTTTCAGCAGTGGGATGGAAATTTTGAAAAGTATGCAGCAGAGAAATTTGAAGCCATATGATCGCACTCTTGCAACCCTTTCAATAGGTTGTAGCAAGGCATTAGAATTGGGTTTAGCTGAGACTCTGCTGGATCAAATATCTGTGTATTCACATCCACATGCTTTTAATGCTTTTCTTGCAGCATGTGACATTAGGGATCAACCTGAAAATGCCGTGCGGTTGCTAGCTAAAATGAAACATCTACAAGTCACGCCAAATATATGGACATATGAGCAGCTGTTTTCCTTGTTTGGTAACGTGAATGCCCCATATGAAGAGGGCAACATGTTGTCACAGGTAGATGCTGCTAAACGGATTAAAGCTATAGAAATGGATATGGCGAACTATGGCATTCAGCACAGTTTTGTGTCAATGAATAACTTGCTGAAAGCCCTTGGAGCAGAAGGGATGACGAGAGAGCTGATCCATTATTTACATGTGGCGGAGAATCTTTTTTGTCGTAATCACATTTATCTGGGAACACCTATCTATAATACGGTGTTGCATTCACTTGTTGAGAGTGAGGAAAGCCAAATGGCAATTAAGATGTTTAAAAACATGAAGTCATGTGGTGTCCCGGCAGATGCTGCAACTTATACTATAATGATTAAGTGTTGTAAAATTCTCAGATGTTATAGATCTGCTTGTGCATTGGTTTCTATGATGTTGCGAGATGGCTTTTACCCTCTAACAATAACTTACACTGCTCTCATAAAGACTTTGTTGGAAGATGATATCATTGATGAAGCACTGAATCTTTTGGATCAAGCCAGCTCAGAAGGGAATAAACTTGATACTTTAGTTTTCAATACCATTCTTCGAAAAGCCTGTGAAAAGGAACTGATTGATGTAGTTGAGTTTCTTGTTGAGTGGATGCACCAAGAAAAAATCCGGCCTGATTCGGGGACGTGCTCTTCTGTTTTCACTGCATATACGAACTGTGGTTTTTACAGCACAGCCATGGAAGCATTGCAGGTTTTGAGTATGCGTATAATATGTGACGAAGATGGAAGCTGTTCAGAAAAGACAAAATTTGAGGACGACTATATCTTTGCTGAAGACGAGGGAGCTGAATCCCGTATAATCCTGCATTTTAAAGATTCTAAAGAGGACTTGGCTGTTGCCCTACTGAATTTAAGATGGTGCGCGGTGCTTGGCTTCCCAATTTCTTGGTTGCCTGATCAAAGCCGTGGGCAAAAAGACTCTCAACTAACTATACTGCCAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

652

Amino Acids

73.27

Weight (kDa)

5.74

Isoelectric Point (pI)

42.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	406 - 449	7.6e-12	PPR repeat family
TPR_24	PF23276	409 - 520	7.6e-06	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76280 AT1G76280 AT1G76280 AT1G76280 AT1G76280
fragaria_vesca	FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510
malus_domestica	MD08G1002500.v1.1
prunus_persica	Prupe.2G013700_v2.0.a1 Prupe.2G013700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0270441 RchiOBHm_Chr6g0304231
rosa_laevigata	RLG00000011004 RLG00000013792 RLG00000035378
rosa_multiflora	Rmu_sc0009479.1_g000010 Rmu_ssc0000218.1_g000015
rosa_roxburghii	Rroxscaffold_7G00163950 Rroxscaffold_7G00197930
rosa_rugosa	Rorug05G0331600 Rorug05G0331700 Rorug06G0329000
rosa_samantha	Rh5AG395800 Rh6AG173300 Rh6AG442800 Rh6BG177200 Rh6BG459900 Rh6CG173000 Rh6CG455200 Rh6DG165400 Rh6DG442200
rosa_wichuraiana	Rw0G006810 Rw5G037260 Rw6G014750 Rw6G038390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1693
AccB7I	CCANNNNNTGG	1 cut(s)	494
AccII	CGCG	1 cut(s)	1877
AciI	CCGC	5 cut(s)	437, 491, 907, 1172, 1877
AclWI	GGATC	5 cut(s)	447, 828, 894, 1147, 1500
AcoI	YGGCCR	1 cut(s)	421
AcsI	RAATTY	6 cut(s)	412, 708, 733, 1350, 1760, 1861
AcuI	CTGAAG	1 cut(s)	1806
AfaI	GTAC	2 cut(s)	517, 548
AfiI	CCNNNNNNNGG	3 cut(s)	494, 686, 1631
AflIII	ACRYGT	2 cut(s)	1014, 1165
AgsI	TTSAA	8 cut(s)	315, 340, 358, 635, 715, 739, 771, 1537
AhlI	ACTAGT	1 cut(s)	449
AjiI	CACGTC	1 cut(s)	1638
AjnI	CCWGG	2 cut(s)	591, 1951
AjuI	GAANNNNNNNTTGG	2 cut(s)	353, 385
AloI	GAACNNNNNNTCC	2 cut(s)	375, 407
Alw21I	GWGCWC	1 cut(s)	1643
Alw26I	GTCTC	1 cut(s)	803
AlwI	GGATC	5 cut(s)	447, 828, 894, 1147, 1500
AlwNI	CAGNNNCTG	2 cut(s)	405, 1316
AoxI	GGCC	3 cut(s)	421, 589, 1622
ApeKI	GCWGC	5 cut(s)	724, 869, 964, 1034, 1316
ApoI	RAATTY	6 cut(s)	412, 708, 733, 1350, 1760, 1861
ArsI	GACNNNNNNTTYG	2 cut(s)	1763, 1795
Asp700I	GAANNNNTTC	2 cut(s)	274, 1744
AspLEI	GCGC	1 cut(s)	1877
AsuC2I	CCSGG	1 cut(s)	1307
AsuII	TTCGAA	1 cut(s)	1549
AsuNHI	GCTAGC	1 cut(s)	913
BaeI	ACNNNNGTAYC	2 cut(s)	1515, 1548
BalI	TGGCCA	1 cut(s)	423
BbsI	GAAGAC	1 cut(s)	1794
Bbv12I	GWGCWC	1 cut(s)	1643
BbvI	GCAGC	5 cut(s)	736, 881, 976, 1021, 1303
BccI	CCATC	8 cut(s)	34, 413, 488, 650, 697, 1397, 1730, 1863
BceAI	ACGGC	2 cut(s)	887, 1902
BciT130I	CCWGG	2 cut(s)	593, 1953
BclI	TGATCA	1 cut(s)	1909
BcnI	CCSGG	1 cut(s)	1307
BcoDI	GTCTC	1 cut(s)	803
BcuI	ACTAGT	1 cut(s)	449
BfaI	CTAG	2 cut(s)	450, 914
BfmI	CTRYAG	4 cut(s)	120, 157, 611, 1053
BfuAI	ACCTGC	1 cut(s)	1693
BglII	AGATCT	1 cut(s)	1367
BisI	GCNGC	5 cut(s)	725, 870, 965, 1035, 1317
BlpI	GCTNAGC	1 cut(s)	597
BlsI	GCNGC	5 cut(s)	726, 871, 966, 1036, 1318
BmcAI	AGTACT	1 cut(s)	517
Bme1390I	CCNGG	3 cut(s)	593, 1307, 1953
BmgBI	CACGTC	1 cut(s)	1638
BmrFI	CCNGG	3 cut(s)	593, 1307, 1953
BmsI	GCATC	4 cut(s)	606, 1021, 1303, 1593
BmtI	GCTAGC	1 cut(s)	917
BpiI	GAAGAC	1 cut(s)	1794
Bpu1102I	GCTNAGC	1 cut(s)	597
Bpu14I	TTCGAA	1 cut(s)	1549
BpuEI	CTTGAG	1 cut(s)	74
BpuMI	CCSGG	1 cut(s)	1307
BsaJI	CCNNGG	3 cut(s)	1123, 1689, 1918
Bsc4I	CCNNNNNNNGG	3 cut(s)	494, 686, 1631
Bse3DI	GCAATG	2 cut(s)	236, 1697
BseBI	CCWGG	2 cut(s)	593, 1953
BseDI	CCNNGG	3 cut(s)	1123, 1689, 1918
BseGI	GGATG	6 cut(s)	424, 499, 708, 841, 1143, 1608
BseLI	CCNNNNNNNGG	3 cut(s)	494, 686, 1631
BseMI	GCAATG	2 cut(s)	236, 1697
BseMII	CTCAG	5 cut(s)	155, 588, 798, 1369, 1518
BseRI	GAGGAG	1 cut(s)	389
BseXI	GCAGC	5 cut(s)	736, 881, 976, 1021, 1303
BsgI	GTGCAG	1 cut(s)	591
Bsh1236I	CGCG	1 cut(s)	1877
BshFI	GGCC	3 cut(s)	423, 591, 1624
BsiHKAI	GWGCWC	1 cut(s)	1643
BsiSI	CCGG	2 cut(s)	1307, 1621
BslFI	GGGAC	3 cut(s)	377, 1289, 1648
BslI	CCNNNNNNNGG	3 cut(s)	494, 686, 1631
BsmAI	GTCTC	1 cut(s)	803
BsmFI	GGGAC	3 cut(s)	377, 1289, 1648
BsmI	GAATGC	3 cut(s)	997, 1080, 1234
BsnI	GGCC	3 cut(s)	423, 591, 1624
Bsp119I	TTCGAA	1 cut(s)	1549
Bsp1286I	GDGCHC	1 cut(s)	1643
Bsp143I	GATC	8 cut(s)	439, 748, 820, 886, 1152, 1367, 1492, 1909
Bsp1720I	GCTNAGC	1 cut(s)	597
Bsp19I	CCATGG	1 cut(s)	1689
BspACI	CCGC	5 cut(s)	437, 491, 907, 1172, 1877
BspANI	GGCC	3 cut(s)	423, 591, 1624
BspCNI	CTCAG	5 cut(s)	156, 589, 799, 1368, 1517
BspFNI	CGCG	1 cut(s)	1877
BspMI	ACCTGC	1 cut(s)	1693
BspOI	GCTAGC	1 cut(s)	917
BspPI	GGATC	5 cut(s)	447, 828, 894, 1147, 1500
BspQI	GCTCTTC	1 cut(s)	1648
BspT104I	TTCGAA	1 cut(s)	1549
BsrDI	GCAATG	2 cut(s)	236, 1697
BssECI	CCNNGG	3 cut(s)	1123, 1689, 1918
BssMI	GATC	8 cut(s)	439, 748, 820, 886, 1152, 1367, 1492, 1909
BssT1I	CCWWGG	2 cut(s)	1123, 1689
Bst2UI	CCWGG	2 cut(s)	593, 1953
Bst4CI	ACNGT	5 cut(s)	161, 387, 1091, 1228, 1670
Bst6I	CTCTTC	2 cut(s)	999, 1648
BstAPI	GCANNNNNTGC	1 cut(s)	1316
BstBI	TTCGAA	1 cut(s)	1549
BstC8I	GCNNGC	4 cut(s)	96, 229, 915, 1501
BstDEI	CTNAG	6 cut(s)	164, 477, 597, 807, 1355, 1504
BstDSI	CCRYGG	2 cut(s)	1689, 1918
BstF5I	GGATG	6 cut(s)	424, 499, 708, 841, 1143, 1608
BstFNI	CGCG	1 cut(s)	1877
BstHHI	GCGC	1 cut(s)	1877
BstKTI	GATC	8 cut(s)	442, 751, 823, 889, 1155, 1370, 1495, 1912
BstMAI	GTCTC	1 cut(s)	803
BstMBI	GATC	8 cut(s)	439, 748, 820, 886, 1152, 1367, 1492, 1909
BstMWI	GCNNNNNNNGC	7 cut(s)	91, 351, 857, 866, 1127, 1316, 1694
BstNI	CCWGG	2 cut(s)	593, 1953
BstNSI	RCATGY	5 cut(s)	231, 851, 876, 1018, 1169
BstSCI	CCNGG	3 cut(s)	591, 1305, 1951
BstSFI	CTRYAG	4 cut(s)	120, 157, 611, 1053
BstUI	CGCG	1 cut(s)	1877
BstV1I	GCAGC	5 cut(s)	736, 881, 976, 1021, 1303
BstV2I	GAAGAC	1 cut(s)	1794
BstX2I	RGATCY	1 cut(s)	1367
BstXI	CCANNNNNNTGG	2 cut(s)	951, 1899
BstYI	RGATCY	1 cut(s)	1367
BsuRI	GGCC	3 cut(s)	423, 591, 1624
BtgI	CCRYGG	2 cut(s)	1689, 1918
BtrI	CACGTC	1 cut(s)	1638
BtsCI	GGATG	6 cut(s)	424, 499, 708, 841, 1143, 1608
BtsI	GCAGTG	4 cut(s)	80, 703, 1431, 1653
BtsIMutI	CAGTG	6 cut(s)	32, 80, 703, 1431, 1478, 1653
BveI	ACCTGC	1 cut(s)	1693
Cac8I	GCNNGC	4 cut(s)	96, 229, 915, 1501
CaiI	CAGNNNCTG	2 cut(s)	405, 1316
CfoI	GCGC	1 cut(s)	1877
Csp6I	GTAC	2 cut(s)	516, 547
CviQI	GTAC	2 cut(s)	516, 547
DdeI	CTNAG	6 cut(s)	164, 477, 597, 807, 1355, 1504
DpnI	GATC	8 cut(s)	441, 750, 822, 888, 1154, 1369, 1494, 1911
DpnII	GATC	8 cut(s)	439, 748, 820, 886, 1152, 1367, 1492, 1909
DraI	TTTAAA	3 cut(s)	219, 1282, 1825
EaeI	YGGCCR	1 cut(s)	421
Eam1104I	CTCTTC	2 cut(s)	999, 1648
EarI	CTCTTC	2 cut(s)	999, 1648
EciI	GGCGGA	1 cut(s)	1187
Eco130I	CCWWGG	2 cut(s)	1123, 1689
Eco32I	GATATC	1 cut(s)	1465
Eco57I	CTGAAG	1 cut(s)	1806
EcoRII	CCWGG	2 cut(s)	591, 1951
EcoRV	GATATC	1 cut(s)	1465
EcoT14I	CCWWGG	2 cut(s)	1123, 1689
ErhI	CCWWGG	2 cut(s)	1123, 1689
FaqI	GGGAC	3 cut(s)	377, 1289, 1648
FauNDI	CATATG	4 cut(s)	76, 745, 958, 1000
FbaI	TGATCA	1 cut(s)	1909
Fnu4HI	GCNGC	5 cut(s)	725, 870, 965, 1035, 1317
FokI	GGATG	6 cut(s)	431, 506, 715, 828, 1150, 1615
Fsp4HI	GCNGC	5 cut(s)	725, 870, 965, 1035, 1317
FspBI	CTAG	2 cut(s)	450, 914
GlaI	GCGC	1 cut(s)	1876
GluI	GCNGC	5 cut(s)	725, 870, 965, 1035, 1317
HaeIII	GGCC	3 cut(s)	423, 591, 1624
HapII	CCGG	2 cut(s)	1307, 1621
HhaI	GCGC	1 cut(s)	1877
Hin6I	GCGC	1 cut(s)	1875
HinP1I	GCGC	1 cut(s)	1875
HindIII	AAGCTT	1 cut(s)	92
HinfI	GANTC	7 cut(s)	811, 1177, 1483, 1628, 1802, 1829, 1931
HpaII	CCGG	2 cut(s)	1307, 1621
Hpy166II	GTNNAC	2 cut(s)	131, 549
Hpy188I	TCNGA	5 cut(s)	165, 668, 1358, 1507, 1750
Hpy188III	TCNNGA	3 cut(s)	315, 399, 680
Hpy8I	GTNNAC	2 cut(s)	131, 549
HpyAV	CCTTC	4 cut(s)	133, 405, 1127, 1502
HpyCH4III	ACNGT	5 cut(s)	161, 387, 1091, 1228, 1670
HpyCH4IV	ACGT	2 cut(s)	987, 1637
HpyF10VI	GCNNNNNNNGC	7 cut(s)	91, 351, 857, 866, 1127, 1316, 1694
HpyF3I	CTNAG	6 cut(s)	164, 477, 597, 807, 1355, 1504
HpySE526I	ACGT	2 cut(s)	987, 1637
HspAI	GCGC	1 cut(s)	1875
Ksp22I	TGATCA	1 cut(s)	1909
Kzo9I	GATC	8 cut(s)	439, 748, 820, 886, 1152, 1367, 1492, 1909
LguI	GCTCTTC	1 cut(s)	1648
LmnI	GCTCC	4 cut(s)	43, 529, 1127, 1796
Lsp1109I	GCAGC	5 cut(s)	736, 881, 976, 1021, 1303
LweI	GCATC	4 cut(s)	606, 1021, 1303, 1593
MaeI	CTAG	2 cut(s)	450, 914
MaeII	ACGT	2 cut(s)	987, 1637
MaeIII	GTNAC	6 cut(s)	70, 875, 937, 983, 1020, 1727
MalI	GATC	8 cut(s)	441, 750, 822, 888, 1154, 1369, 1494, 1911
MboI	GATC	8 cut(s)	439, 748, 820, 886, 1152, 1367, 1492, 1909
MboII	GAAGA	9 cut(s)	73, 303, 370, 1016, 1469, 1538, 1635, 1745, 1799
MfeI	CAATTG	1 cut(s)	672
MflI	RGATCY	1 cut(s)	1367
MhlI	GDGCHC	1 cut(s)	1643
MlsI	TGGCCA	1 cut(s)	423
MluNI	TGGCCA	1 cut(s)	423
MlyI	GAGTC	2 cut(s)	805, 1925
MmeI	TCCRAC	1 cut(s)	1434
MnlI	CCTC	9 cut(s)	186, 367, 680, 1000, 1246, 1425, 1759, 1786, 1831
Mox20I	TGGCCA	1 cut(s)	423
MroXI	GAANNNNTTC	2 cut(s)	274, 1744
MscI	TGGCCA	1 cut(s)	423
MslI	CAYNNNNRTG	3 cut(s)	651, 846, 1688
Msp20I	TGGCCA	1 cut(s)	423
MspA1I	CMGCKG	2 cut(s)	491, 967
MspI	CCGG	2 cut(s)	1307, 1621
MspR9I	CCNGG	3 cut(s)	593, 1307, 1953
MunI	CAATTG	1 cut(s)	672
Mva1269I	GAATGC	3 cut(s)	997, 1080, 1234
MvaI	CCWGG	2 cut(s)	593, 1953
MvnI	CGCG	1 cut(s)	1877
MwoI	GCNNNNNNNGC	7 cut(s)	91, 351, 857, 866, 1127, 1316, 1694
NciI	CCSGG	1 cut(s)	1307
NcoI	CCATGG	1 cut(s)	1689
NdeI	CATATG	4 cut(s)	76, 745, 958, 1000
NdeII	GATC	8 cut(s)	439, 748, 820, 886, 1152, 1367, 1492, 1909
NheI	GCTAGC	1 cut(s)	913
NmuCI	GTSAC	4 cut(s)	875, 937, 1020, 1727
NspI	RCATGY	5 cut(s)	231, 851, 876, 1018, 1169
NspV	TTCGAA	1 cut(s)	1549
PaeI	GCATGC	1 cut(s)	231
PciI	ACATGT	2 cut(s)	1014, 1165
PciSI	GCTCTTC	1 cut(s)	1648
PctI	GAATGC	3 cut(s)	997, 1080, 1234
PdmI	GAANNNNTTC	2 cut(s)	274, 1744
PfeI	GAWTC	5 cut(s)	1177, 1483, 1628, 1802, 1829
PflMI	CCANNNNNTGG	1 cut(s)	494
PkrI	GCNGC	5 cut(s)	726, 871, 966, 1036, 1318
PleI	GAGTC	2 cut(s)	805, 1925
PpsI	GAGTC	2 cut(s)	805, 1925
PscI	ACATGT	2 cut(s)	1014, 1165
Psp6I	CCWGG	2 cut(s)	591, 1951
PspGI	CCWGG	2 cut(s)	591, 1951
PstNI	CAGNNNCTG	2 cut(s)	405, 1316
PsuI	RGATCY	1 cut(s)	1367
PvuII	CAGCTG	1 cut(s)	967
RsaI	GTAC	2 cut(s)	517, 548
RsaNI	GTAC	2 cut(s)	516, 547
RseI	CAYNNNNRTG	3 cut(s)	651, 846, 1688
SapI	GCTCTTC	1 cut(s)	1648
SatI	GCNGC	5 cut(s)	725, 870, 965, 1035, 1317
Sau3AI	GATC	8 cut(s)	439, 748, 820, 886, 1152, 1367, 1492, 1909
ScaI	AGTACT	1 cut(s)	517
SchI	GAGTC	2 cut(s)	805, 1925
ScrFI	CCNGG	3 cut(s)	593, 1307, 1953
SduI	GDGCHC	1 cut(s)	1643
SfaNI	GCATC	4 cut(s)	606, 1021, 1303, 1593
SfcI	CTRYAG	4 cut(s)	120, 157, 611, 1053
SfuI	TTCGAA	1 cut(s)	1549
SmiMI	CAYNNNNRTG	3 cut(s)	651, 846, 1688
SmlI	CTYRAG	1 cut(s)	89
SmoI	CTYRAG	1 cut(s)	89
SpeI	ACTAGT	1 cut(s)	449
SphI	GCATGC	1 cut(s)	231
SsiI	CCGC	5 cut(s)	437, 491, 907, 1172, 1877
SspI	AATATT	1 cut(s)	505
SspMI	CTAG	2 cut(s)	450, 914
StyD4I	CCNGG	3 cut(s)	591, 1305, 1951
StyI	CCWWGG	2 cut(s)	1123, 1689
TaaI	ACNGT	5 cut(s)	161, 387, 1091, 1228, 1670
TaiI	ACGT	2 cut(s)	990, 1640
TaqI	TCGA	1 cut(s)	1549
TatI	WGTACW	1 cut(s)	515
TfiI	GAWTC	5 cut(s)	1177, 1483, 1628, 1802, 1829
TscAI	CASTG	6 cut(s)	32, 87, 703, 1438, 1485, 1660
TseFI	GTSAC	4 cut(s)	875, 937, 1020, 1727
TseI	GCWGC	5 cut(s)	724, 869, 964, 1034, 1316
Tsp45I	GTSAC	4 cut(s)	875, 937, 1020, 1727
TspDTI	ATGAA	7 cut(s)	81, 396, 938, 1017, 1118, 1304, 1488
TspGWI	ACGGA	1 cut(s)	1057
TspRI	CASTG	6 cut(s)	32, 87, 703, 1438, 1485, 1660
Van91I	CCANNNNNTGG	1 cut(s)	494
XapI	RAATTY	6 cut(s)	412, 708, 733, 1350, 1760, 1861
XceI	RCATGY	5 cut(s)	231, 851, 876, 1018, 1169
XcmI	CCANNNNNNNNNTGG	2 cut(s)	28, 653
XmnI	GAANNNNTTC	2 cut(s)	274, 1744
XspI	CTAG	2 cut(s)	450, 914
ZrmI	AGTACT	1 cut(s)	517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.