Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001709

Physical Location & Seq

Genomic Coordinates Reverse (-)

63599467 .. 63605752

Gene Structure 6286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ27333

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

ATGCACAGAGCTCTGGCCAGGATTCCATTGCGCTCCATTGCAGAATCATTTTCACACCTCCACCATGGACGAAGAATTGTTGTTGCTGAGAGACTGGACTATTCTCGAACTCTTACTATTTCAACTGGTCGAGATGTTTTATGGAATGGAGCAGAATCAACTACGATGAATTTGCAGATACAAATTGTTAAGGCTCTGAAATTGGGTAAAAGAGGCGAAGCCTCCAATCTTCTTTTGAGTCTAGGCCAGGGAAATGACGTTAAAGGAGCTGATGATTTCATGCATATTCTAAAGTACTGTGCCACGTCACCTGATCCTTTGTTTGTCATGGAAGCTTGGACAATAATGGATGAGAAAGAGATTAGTCTGAATAGCCTTTGCTCCGCACTAATGGTGGAAGCTCTATGTAATGGAGGATACTTGGAGGAGGCATTAAAGTTGATAAATTTTCTTAAAGAAAGTCATGGTATCTATCCGGTTCTACATGTCTACAACACTTTTTTGAAAGCTTGTACCAAAATGCAAAGTATGGTTTATGCCAATCAGTGTTTGGAATTGATGGATCGGCGAAAGGTGGGGAAGAATGAAGTTACATATGCACTGCTTCTCAAGCTTGCAGTTTGGCAACAAAACCTGTCTGTAGCCCATGAAGTTTGGAAGGACTATATCAAACACTACAGTCTGAGCATTATCCCTCTGCAAAAGTTTCTTTTGTCCTTTAGTAAGTTGGGAGATTTAAAATCTGCATGCAAGACATTGCAATATATGGTGGCTTTAGTCATCAGGGGAAAGGCTTCTGTTAATAAATCTATTAAGGGAAAGTTGTATTCTTCAGGATTGGACATTCCTATACCTTTGAACTGTGAATTAGGCTTGAAGAAACTTAATTTGAAGGAGAATGAACAGTCTGTCCCTTCCAGATACTGCGAGAATTTGGATGGCCATGTTGTTTTTGTGGATCAATGCACTAGTTTTGGCTTGGGTTTTGGAGAAACTAAGAGTGTTCCAGCGGATGGTCTTAATATTGATATAAGTACTCCTGTTATGGAGCTTTTGAGATGTTCGTTCACGAACTTGATATATGCTTGTGCAGAATTAAGAAATGGTGGCCTGGCTGAGCAGTTAGTCCTACAGTTGAAAAGTATGCAGCAGAGAAATTTAAAGCCATATGATCGCACTCTTGCAACCCTTTCAATAGGTTGTAGCAAGGCATTAGAATTGGGTTTAGCTGAGACTCTACTGGATCAAATATCTGTGTATTCACATCCACATGCTTTTAATGCTTTTCTTGCAGCATGTGACATTATGGATCAACCTGAAAATGCCGTGCTGATGCTAGCTAAAATGAAACATCTACAAGTCACGCCAAATATATGGACATATGAGCAGCTGTTTTCCTTATTTGGTAACGTGAATGCCCCATATGAAGAGGGCAACATGTTGTCACAGGTAGATGCTGCTAAACGGATTAAAGCTATAGAAATGGATATGGCGAACTATGGCATTCAGCACAGTTTTTTGTCAATGAATAACTTGCTGAAAGCCCTTGGAGCAGAAGGGATGACGAGAGAGCTGATCCATTATTTACATGTGGCAGAGAATCTTTTTTGTCGTAATCACATTTATCTGGGAACACCTATCTATAATACGGTGTTGCATTCACTTGTTGAGAGTGAGGAAAGCCAAATGGCAATTAAGATGTTTAAAAACATGAAGTCATGTGGTGTCCCAGCAGATGCTGCAACTTATACTATAATGATCGAGTGTTGTAAAATTCTCAGATGTTACAGATCTGCTTGTGCATTGGTTTCTATGATGTTGCGAGATGGCTTTTACCCTGTAACAATAACTTACACTGCTCTCATAAAGACTTTGTTGGAAGATGATATCATTGATGAAGCACTGAATCTTTTGGATCAAGCCAGCTCAGAAGGGAATAAACTTGATACTTTAGTTTTCAATACCATTCTTCGAAAAGCCTGTGAAAAGGAACTGATTGATGTAGTTGAGTTTCTTGTTGAGTGGATGCACCAAGAAAAAATCCGGCCTGATTCAGGGACGTGCTCTTGTGTTTTCACTGCATATACGAACTGTGGTTTTTACAGCACAGCCATGGAAGCATTGCAGGTTTTGAGTATGCGTATAATATGTGACGAAGATGGAAGCTGTTCAGAAAAGAGAAAATTTGAGGACGACTATATCTTTGCTGAAGACAAGGGAGCTGAATCCCATATAATCCAGCATTTTAAAGATTCTAAAGAGGACTTGGCTGTTGCCCTACTGAATTTAAGATGGTGCGCGGTGCTTGGCTTCCCAATTTCTTGGTTGCCTGATCAAAGCCCGTGGGCAAAAAGACTCTCAACTAACTATACTGCCAGGATAGGAGCTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

797

Amino Acids

89.47

Weight (kDa)

6.19

Isoelectric Point (pI)

41.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	547 - 590	2.9e-11	PPR repeat family
TPR_24	PF23276	550 - 660	1.9e-06	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76280 AT1G76280 AT1G76280 AT1G76280 AT1G76280
fragaria_vesca	FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510
malus_domestica	MD08G1002500.v1.1
prunus_persica	Prupe.2G013700_v2.0.a1 Prupe.2G013700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0270441 RchiOBHm_Chr6g0304231
rosa_laevigata	RLG00000011004 RLG00000013792 RLG00000035378
rosa_multiflora	Rmu_sc0009479.1_g000010 Rmu_ssc0000218.1_g000015
rosa_roxburghii	Rroxscaffold_7G00163950 Rroxscaffold_7G00197930
rosa_rugosa	Rorug05G0331600 Rorug05G0331700 Rorug06G0329000
rosa_samantha	Rh5AG395800 Rh6AG173300 Rh6AG442800 Rh6BG177200 Rh6BG459900 Rh6CG173000 Rh6CG455200 Rh6DG165400 Rh6DG442200
rosa_wichuraiana	Rw0G006810 Rw5G037260 Rw6G014750 Rw6G038390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2116
AccB7I	CCANNNNNTGG	1 cut(s)	1013
AccI	GTMKAC	1 cut(s)	489
AccII	CGCG	1 cut(s)	2300
AciI	CCGC	3 cut(s)	384, 1010, 2300
AclWI	GGATC	7 cut(s)	308, 570, 966, 1251, 1317, 1570, 1923
AcoI	YGGCCR	2 cut(s)	15, 940
AcsI	RAATTY	7 cut(s)	169, 445, 931, 1156, 1773, 2183, 2284
AcuI	CTGAAG	2 cut(s)	816, 2229
AfaI	GTAC	3 cut(s)	296, 514, 1036
AfiI	CCNNNNNNNGG	2 cut(s)	1013, 2054
AflIII	ACRYGT	3 cut(s)	484, 1437, 1588
AgsI	TTSAA	8 cut(s)	123, 505, 859, 877, 892, 1138, 1194, 1960
AhlI	ACTAGT	1 cut(s)	968
AjiI	CACGTC	2 cut(s)	306, 2061
AjnI	CCWGG	4 cut(s)	17, 246, 1110, 2375
AloI	GAACNNNNNNTCC	2 cut(s)	894, 926
Alw21I	GWGCWC	2 cut(s)	13, 2066
Alw26I	GTCTC	2 cut(s)	85, 1226
AlwI	GGATC	7 cut(s)	308, 570, 966, 1251, 1317, 1570, 1923
AlwNI	CAGNNNCTG	2 cut(s)	924, 1739
AoxI	GGCC	5 cut(s)	15, 244, 940, 1108, 2045
ApeKI	GCWGC	5 cut(s)	1147, 1292, 1387, 1457, 1739
ApoI	RAATTY	7 cut(s)	169, 445, 931, 1156, 1773, 2183, 2284
ArsI	GACNNNNNNTTYG	2 cut(s)	2186, 2218
Asp700I	GAANNNNTTC	2 cut(s)	793, 2167
AspLEI	GCGC	2 cut(s)	33, 2300
AsuHPI	GGTGA	1 cut(s)	300
AsuII	TTCGAA	1 cut(s)	1972
AsuNHI	GCTAGC	1 cut(s)	1336
BaeI	ACNNNNGTAYC	2 cut(s)	1938, 1971
BalI	TGGCCA	2 cut(s)	17, 942
BanII	GRGCYC	1 cut(s)	13
BbsI	GAAGAC	1 cut(s)	2217
Bbv12I	GWGCWC	2 cut(s)	13, 2066
BbvI	GCAGC	5 cut(s)	1159, 1304, 1399, 1444, 1726
BccI	CCATC	6 cut(s)	553, 932, 1007, 1820, 2153, 2286
BceAI	ACGGC	1 cut(s)	1310
BcgI	CGANNNNNNTGC	2 cut(s)	154, 188
BciT130I	CCWGG	4 cut(s)	19, 248, 1112, 2377
BciVI	GTATCC	1 cut(s)	410
BclI	TGATCA	1 cut(s)	2332
BcoDI	GTCTC	2 cut(s)	85, 1226
BcuI	ACTAGT	1 cut(s)	968
BfaI	CTAG	3 cut(s)	242, 969, 1337
BfmI	CTRYAG	4 cut(s)	639, 676, 1130, 1476
BfuAI	ACCTGC	1 cut(s)	2116
BfuI	GTATCC	1 cut(s)	410
BglII	AGATCT	1 cut(s)	1790
BisI	GCNGC	5 cut(s)	1148, 1293, 1388, 1458, 1740
BlpI	GCTNAGC	1 cut(s)	1116
BlsI	GCNGC	5 cut(s)	1149, 1294, 1389, 1459, 1741
BmcAI	AGTACT	2 cut(s)	296, 1036
Bme1390I	CCNGG	4 cut(s)	19, 248, 1112, 2377
BmgBI	CACGTC	2 cut(s)	306, 2061
BmrFI	CCNGG	4 cut(s)	19, 248, 1112, 2377
BmsI	GCATC	4 cut(s)	1323, 1444, 1726, 2016
BmtI	GCTAGC	1 cut(s)	1340
BpiI	GAAGAC	1 cut(s)	2217
Bpu1102I	GCTNAGC	1 cut(s)	1116
Bpu14I	TTCGAA	1 cut(s)	1972
BpuEI	CTTGAG	1 cut(s)	593
BsaJI	CCNNGG	5 cut(s)	64, 247, 1546, 2112, 2342
BsaWI	WCCGGW	1 cut(s)	475
Bsc4I	CCNNNNNNNGG	2 cut(s)	1013, 2054
Bse1I	ACTGG	3 cut(s)	99, 130, 1245
Bse3DI	GCAATG	4 cut(s)	26, 36, 755, 2120
BseBI	CCWGG	4 cut(s)	19, 248, 1112, 2377
BseDI	CCNNGG	5 cut(s)	64, 247, 1546, 2112, 2342
BseGI	GGATG	6 cut(s)	355, 943, 1018, 1264, 1566, 2031
BseLI	CCNNNNNNNGG	2 cut(s)	1013, 2054
BseMI	GCAATG	4 cut(s)	26, 36, 755, 2120
BseMII	CTCAG	6 cut(s)	78, 674, 1107, 1221, 1792, 1941
BseNI	ACTGG	3 cut(s)	99, 130, 1245
BseRI	GAGGAG	1 cut(s)	440
BseXI	GCAGC	5 cut(s)	1159, 1304, 1399, 1444, 1726
BseYI	CCCAGC	1 cut(s)	1729
BsgI	GTGCAG	1 cut(s)	1110
Bsh1236I	CGCG	1 cut(s)	2300
BshFI	GGCC	5 cut(s)	17, 246, 942, 1110, 2047
BsiHKAI	GWGCWC	2 cut(s)	13, 2066
BsiSI	CCGG	2 cut(s)	476, 2044
BslFI	GGGAC	3 cut(s)	896, 1712, 2071
BslI	CCNNNNNNNGG	2 cut(s)	1013, 2054
BsmAI	GTCTC	2 cut(s)	85, 1226
BsmFI	GGGAC	3 cut(s)	896, 1712, 2071
BsmI	GAATGC	3 cut(s)	1420, 1503, 1657
BsnI	GGCC	5 cut(s)	17, 246, 942, 1110, 2047
Bsp119I	TTCGAA	1 cut(s)	1972
Bsp1286I	GDGCHC	2 cut(s)	13, 2066
Bsp1720I	GCTNAGC	1 cut(s)	1116
Bsp19I	CCATGG	2 cut(s)	64, 2112
BspACI	CCGC	3 cut(s)	384, 1010, 2300
BspANI	GGCC	5 cut(s)	17, 246, 942, 1110, 2047
BspCNI	CTCAG	6 cut(s)	79, 675, 1108, 1222, 1791, 1940
BspFNI	CGCG	1 cut(s)	2300
BspMI	ACCTGC	1 cut(s)	2116
BspOI	GCTAGC	1 cut(s)	1340
BspPI	GGATC	7 cut(s)	308, 570, 966, 1251, 1317, 1570, 1923
BspT104I	TTCGAA	1 cut(s)	1972
BsrDI	GCAATG	4 cut(s)	26, 36, 755, 2120
BsrI	ACTGG	3 cut(s)	99, 130, 1245
BssECI	CCNNGG	5 cut(s)	64, 247, 1546, 2112, 2342
BssT1I	CCWWGG	3 cut(s)	64, 1546, 2112
Bst2UI	CCWGG	4 cut(s)	19, 248, 1112, 2377
Bst4CI	ACNGT	8 cut(s)	299, 680, 863, 906, 1134, 1514, 1651, 2093
Bst6I	CTCTTC	1 cut(s)	1422
BstAPI	GCANNNNNTGC	1 cut(s)	1739
BstBI	TTCGAA	1 cut(s)	1972
BstC8I	GCNNGC	4 cut(s)	615, 748, 1338, 1924
BstDEI	CTNAG	7 cut(s)	87, 683, 996, 1116, 1230, 1778, 1927
BstDSI	CCRYGG	3 cut(s)	64, 2112, 2342
BstENI	CCTNNNNNAGG	1 cut(s)	2052
BstF5I	GGATG	6 cut(s)	355, 943, 1018, 1264, 1566, 2031
BstFNI	CGCG	1 cut(s)	2300
BstHHI	GCGC	2 cut(s)	33, 2300
BstMAI	GTCTC	2 cut(s)	85, 1226
BstMWI	GCNNNNNNNGC	6 cut(s)	610, 1280, 1289, 1550, 1739, 2117
BstNI	CCWGG	4 cut(s)	19, 248, 1112, 2377
BstNSI	RCATGY	6 cut(s)	488, 750, 1274, 1299, 1441, 1592
BstSCI	CCNGG	4 cut(s)	17, 246, 1110, 2375
BstSFI	CTRYAG	4 cut(s)	639, 676, 1130, 1476
BstUI	CGCG	1 cut(s)	2300
BstV1I	GCAGC	5 cut(s)	1159, 1304, 1399, 1444, 1726
BstV2I	GAAGAC	1 cut(s)	2217
BstX2I	RGATCY	1 cut(s)	1790
BstXI	CCANNNNNNTGG	2 cut(s)	1374, 2322
BstYI	RGATCY	1 cut(s)	1790
BsuI	GTATCC	1 cut(s)	410
BsuRI	GGCC	5 cut(s)	17, 246, 942, 1110, 2047
BtgI	CCRYGG	3 cut(s)	64, 2112, 2342
BtrI	CACGTC	2 cut(s)	306, 2061
BtsCI	GGATG	6 cut(s)	355, 943, 1018, 1264, 1566, 2031
BtsI	GCAGTG	3 cut(s)	599, 1854, 2076
BtsIMutI	CAGTG	5 cut(s)	551, 599, 1854, 1901, 2076
BveI	ACCTGC	1 cut(s)	2116
Cac8I	GCNNGC	4 cut(s)	615, 748, 1338, 1924
CaiI	CAGNNNCTG	2 cut(s)	924, 1739
CfoI	GCGC	2 cut(s)	33, 2300
Csp6I	GTAC	3 cut(s)	295, 513, 1035
CspCI	CAANNNNNGTGG	2 cut(s)	2324, 2359
CviQI	GTAC	3 cut(s)	295, 513, 1035
DdeI	CTNAG	7 cut(s)	87, 683, 996, 1116, 1230, 1778, 1927
DraI	TTTAAA	4 cut(s)	738, 1161, 1705, 2248
EaeI	YGGCCR	2 cut(s)	15, 940
Eam1104I	CTCTTC	1 cut(s)	1422
EarI	CTCTTC	1 cut(s)	1422
Ecl136II	GAGCTC	1 cut(s)	11
Eco130I	CCWWGG	3 cut(s)	64, 1546, 2112
Eco24I	GRGCYC	1 cut(s)	13
Eco32I	GATATC	1 cut(s)	1888
Eco53kI	GAGCTC	1 cut(s)	11
Eco57I	CTGAAG	2 cut(s)	816, 2229
EcoICRI	GAGCTC	1 cut(s)	11
EcoNI	CCTNNNNNAGG	1 cut(s)	2052
EcoRII	CCWGG	4 cut(s)	17, 246, 1110, 2375
EcoRV	GATATC	1 cut(s)	1888
EcoT14I	CCWWGG	3 cut(s)	64, 1546, 2112
EcoT22I	ATGCAT	1 cut(s)	285
EcoT38I	GRGCYC	1 cut(s)	13
ErhI	CCWWGG	3 cut(s)	64, 1546, 2112
FaqI	GGGAC	3 cut(s)	896, 1712, 2071
FauNDI	CATATG	4 cut(s)	595, 1168, 1381, 1423
FbaI	TGATCA	1 cut(s)	2332
FblI	GTMKAC	1 cut(s)	489
Fnu4HI	GCNGC	5 cut(s)	1148, 1293, 1388, 1458, 1740
FokI	GGATG	6 cut(s)	362, 950, 1025, 1251, 1573, 2038
FriOI	GRGCYC	1 cut(s)	13
Fsp4HI	GCNGC	5 cut(s)	1148, 1293, 1388, 1458, 1740
FspBI	CTAG	3 cut(s)	242, 969, 1337
GlaI	GCGC	2 cut(s)	32, 2299
GluI	GCNGC	5 cut(s)	1148, 1293, 1388, 1458, 1740
GsaI	CCCAGC	1 cut(s)	1733
HaeIII	GGCC	5 cut(s)	17, 246, 942, 1110, 2047
HapII	CCGG	2 cut(s)	476, 2044
HhaI	GCGC	2 cut(s)	33, 2300
Hin6I	GCGC	2 cut(s)	31, 2298
HinP1I	GCGC	2 cut(s)	31, 2298
HindIII	AAGCTT	3 cut(s)	333, 507, 611
HpaII	CCGG	2 cut(s)	476, 2044
HphI	GGTGA	1 cut(s)	300
Hpy166II	GTNNAC	2 cut(s)	490, 1068
Hpy188I	TCNGA	6 cut(s)	198, 369, 684, 1781, 1930, 2173
Hpy188III	TCNNGA	5 cut(s)	105, 131, 834, 918, 1069
Hpy8I	GTNNAC	2 cut(s)	490, 1068
HpyAV	CCTTC	5 cut(s)	652, 886, 924, 1550, 1925
HpyCH4III	ACNGT	8 cut(s)	299, 680, 863, 906, 1134, 1514, 1651, 2093
HpyCH4IV	ACGT	4 cut(s)	258, 305, 1410, 2060
HpyF10VI	GCNNNNNNNGC	6 cut(s)	610, 1280, 1289, 1550, 1739, 2117
HpyF3I	CTNAG	7 cut(s)	87, 683, 996, 1116, 1230, 1778, 1927
HpySE526I	ACGT	4 cut(s)	258, 305, 1410, 2060
HspAI	GCGC	2 cut(s)	31, 2298
Ksp22I	TGATCA	1 cut(s)	2332
LmnI	GCTCC	8 cut(s)	38, 149, 266, 386, 1048, 1550, 2219, 2384
Lsp1109I	GCAGC	5 cut(s)	1159, 1304, 1399, 1444, 1726
LweI	GCATC	4 cut(s)	1323, 1444, 1726, 2016
MaeI	CTAG	3 cut(s)	242, 969, 1337
MaeII	ACGT	4 cut(s)	258, 305, 1410, 2060
MaeIII	GTNAC	9 cut(s)	306, 589, 1298, 1360, 1406, 1443, 1784, 1840, 2150
MflI	RGATCY	1 cut(s)	1790
MhlI	GDGCHC	2 cut(s)	13, 2066
MlsI	TGGCCA	2 cut(s)	17, 942
MluNI	TGGCCA	2 cut(s)	17, 942
MlyI	GAGTC	3 cut(s)	247, 1228, 2349
MmeI	TCCRAC	1 cut(s)	1857
Mox20I	TGGCCA	2 cut(s)	17, 942
Mph1103I	ATGCAT	1 cut(s)	285
MroXI	GAANNNNTTC	2 cut(s)	793, 2167
MscI	TGGCCA	2 cut(s)	17, 942
MslI	CAYNNNNRTG	2 cut(s)	1269, 2111
Msp20I	TGGCCA	2 cut(s)	17, 942
MspA1I	CMGCKG	2 cut(s)	1010, 1390
MspI	CCGG	2 cut(s)	476, 2044
MspR9I	CCNGG	4 cut(s)	19, 248, 1112, 2377
Mva1269I	GAATGC	3 cut(s)	1420, 1503, 1657
MvaI	CCWGG	4 cut(s)	19, 248, 1112, 2377
MvnI	CGCG	1 cut(s)	2300
MwoI	GCNNNNNNNGC	6 cut(s)	610, 1280, 1289, 1550, 1739, 2117
NcoI	CCATGG	2 cut(s)	64, 2112
NdeI	CATATG	4 cut(s)	595, 1168, 1381, 1423
NheI	GCTAGC	1 cut(s)	1336
NmuCI	GTSAC	5 cut(s)	306, 1298, 1360, 1443, 2150
NsiI	ATGCAT	1 cut(s)	285
NspI	RCATGY	6 cut(s)	488, 750, 1274, 1299, 1441, 1592
NspV	TTCGAA	1 cut(s)	1972
PaeI	GCATGC	1 cut(s)	750
PciI	ACATGT	3 cut(s)	484, 1437, 1588
PctI	GAATGC	3 cut(s)	1420, 1503, 1657
PdmI	GAANNNNTTC	2 cut(s)	793, 2167
PfeI	GAWTC	8 cut(s)	22, 44, 155, 1600, 1906, 2051, 2225, 2252
PflMI	CCANNNNNTGG	1 cut(s)	1013
PkrI	GCNGC	5 cut(s)	1149, 1294, 1389, 1459, 1741
PleI	GAGTC	3 cut(s)	246, 1228, 2349
PpsI	GAGTC	3 cut(s)	246, 1228, 2349
PscI	ACATGT	3 cut(s)	484, 1437, 1588
Psp124BI	GAGCTC	1 cut(s)	13
Psp6I	CCWGG	4 cut(s)	17, 246, 1110, 2375
PspFI	CCCAGC	1 cut(s)	1729
PspGI	CCWGG	4 cut(s)	17, 246, 1110, 2375
PstNI	CAGNNNCTG	2 cut(s)	924, 1739
PsuI	RGATCY	1 cut(s)	1790
PvuII	CAGCTG	1 cut(s)	1390
RsaI	GTAC	3 cut(s)	296, 514, 1036
RsaNI	GTAC	3 cut(s)	295, 513, 1035
RseI	CAYNNNNRTG	2 cut(s)	1269, 2111
SacI	GAGCTC	1 cut(s)	13
SatI	GCNGC	5 cut(s)	1148, 1293, 1388, 1458, 1740
ScaI	AGTACT	2 cut(s)	296, 1036
SchI	GAGTC	3 cut(s)	247, 1228, 2349
ScrFI	CCNGG	4 cut(s)	19, 248, 1112, 2377
SduI	GDGCHC	2 cut(s)	13, 2066
SfaNI	GCATC	4 cut(s)	1323, 1444, 1726, 2016
SfcI	CTRYAG	4 cut(s)	639, 676, 1130, 1476
SfuI	TTCGAA	1 cut(s)	1972
SmiMI	CAYNNNNRTG	2 cut(s)	1269, 2111
SmlI	CTYRAG	1 cut(s)	608
SmoI	CTYRAG	1 cut(s)	608
SpeI	ACTAGT	1 cut(s)	968
SphI	GCATGC	1 cut(s)	750
SsiI	CCGC	3 cut(s)	384, 1010, 2300
SspI	AATATT	1 cut(s)	1024
SspMI	CTAG	3 cut(s)	242, 969, 1337
SstI	GAGCTC	1 cut(s)	13
StyD4I	CCNGG	4 cut(s)	17, 246, 1110, 2375
StyI	CCWWGG	3 cut(s)	64, 1546, 2112
TaaI	ACNGT	8 cut(s)	299, 680, 863, 906, 1134, 1514, 1651, 2093
TaiI	ACGT	4 cut(s)	261, 308, 1413, 2063
TaqI	TCGA	4 cut(s)	106, 130, 1761, 1972
TatI	WGTACW	2 cut(s)	294, 1034
TfiI	GAWTC	8 cut(s)	22, 44, 155, 1600, 1906, 2051, 2225, 2252
TscAI	CASTG	5 cut(s)	551, 606, 1861, 1908, 2083
TseFI	GTSAC	5 cut(s)	306, 1298, 1360, 1443, 2150
TseI	GCWGC	5 cut(s)	1147, 1292, 1387, 1457, 1739
Tsp45I	GTSAC	5 cut(s)	306, 1298, 1360, 1443, 2150
TspGWI	ACGGA	1 cut(s)	1480
TspRI	CASTG	5 cut(s)	551, 606, 1861, 1908, 2083
Van91I	CCANNNNNTGG	1 cut(s)	1013
XagI	CCTNNNNNAGG	1 cut(s)	2052
XapI	RAATTY	7 cut(s)	169, 445, 931, 1156, 1773, 2183, 2284
XceI	RCATGY	6 cut(s)	488, 750, 1274, 1299, 1441, 1592
XcmI	CCANNNNNNNNNTGG	1 cut(s)	547
XmiI	GTMKAC	1 cut(s)	489
XmnI	GAANNNNTTC	2 cut(s)	793, 2167
XspI	CTAG	3 cut(s)	242, 969, 1337
ZrmI	AGTACT	2 cut(s)	296, 1036
Zsp2I	ATGCAT	1 cut(s)	285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.