Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001709

Physical Location & Seq

Genomic Coordinates Reverse (-)

62523208 .. 62528834

Gene Structure 5627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G038390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGCACAGACCTCTGGCCAGGATTCCATTGCGCTCCATTGCAGAATCATTTTCACACCTCCACATAATTGTAGCTGAGAGACTGGACTATTCTCGAACTCTTACTATTTCAACTGGTCGAGATGTTTTATGGAATGGAGCAGAATCAACTACGATGAATTTGCAGATACAAATTGTTAAGGCTCTGAAATTGGGTAAAAGAGGCGAAGCCTCCAATCTTCTTTTGAGTCTAGGCCAGAGAAATGACGTTAAAGGAGCTGATGATTTCGTGCATATTCTAAAGTACTGTGCCACGTCACCTGATCCTTTGTTTGTCATGGAAGCTTGGACAATAATGGATGAGAAAGAGATTAGTCTGAATAGCCTTTGCTCCGCACTAATGGTGGAAGCTCTATGTAATGGAGGATACTTGGAGGAGGCATTAAAGTTGATAAATTTTCTTAAAGAAAGTCATGGTATCTATCCGGTTCTACATGTCTACAACACTTTTTTGAAAGCTTGTACCAAAATGCAAAGTATTGTTTATGCCAATCGGTGTTTGGAATTGATGGAGCGGCAAAAGGTGGGGAAGAATGAAGTCACATATGCACTGCTTCTCAAGCTTGCAGTTTGGCAACAAAACCTGTCTGTAGCCCGTGAACTTTGGAAGGACTATATCAAACACTACAGTCTGAGCATTATCCCTCTGCAAAAGTTTCTTTTGTTTAGTAAGTTGGGAGATTTAAAATCTGCATGCAAGACATTGCAATATATGGTGGCTTTAGTCATCAGGGGAAAGGCTTCTGTTAATAAATCTATTAAGGGAAAGTTGTATTCTTCAAGATTGGACATTCCTATACCTTTGAACTGTGAATTAGGCTTGAAGAAACTTAATTTGAAGGAGAATGAACAGTATGTCCCTTCCAGATACTGCGAGAATTTGGATGGCCATGTTGTTTTTGCGGATCAATGCACTATGTTCCAGCGGATGGTTTTAATATTGGAGCTTTTGAGATGTTCGTTCACGAACTTGATATATGCTTGTGCAGAATTAAGAAATGGTGGCCTGGCTGAGCAGTTAGTCCTACAGATGCAAAAATTGGGGTTTCAAATAAATAGCCATGTGTATGATGGCTTAATCAGAGCAATTGTTCCAGAAAGAGGTTTCAGCAGTGGGATGGAAATTTTGAAAAGTATGCAGCAGAGAAATTTAAAGCCATATGATCGCACTCTTGCAACTCTTTCAATAGGTTGTAGCAAGGCATTAGAATTGGGTTTAGCTGAGACTCTGCTGGATCAAATATCTGTGTATTCACATCCACATGCTTTTAATGCTTTTCTTGCAGCATGTGACATTATGGATCAACCTGAAAATGCCGTGCGGATGCTAGCTAAAATGAAACATCTACAAGTCACGCCAAATATATGGACATATGAGCAGCTGTTTTCCTTATTTGGTAACGTGAATGCCCCATATGAAGAGGGCAACATGTTGTCACAGGTAGATGCTGCTAAACGGATTAAAGCTATAGAAATGGATATGGCGAACTATGGCATTCAGCACAGTTTTTTGTCAATGAATAACTTGCTGAAAGCCCTTGGAGCAGAAGGGATGACGAGAGAGCTGATCCATTATTTACATGTGGCGGAGAATCTTTTTTGTCGTAATCACATTTATCTGGGAACACCTCTCTATAATACAGTGTTGCATTCACTTGTTGAGAGTGAGGAAAGCCAAATGGCAATTAAGATGTTTAAAAACATGAAGTCATGTGGTGTCCCGGCAGATGCTGCAACTTATACTATAATGATTGAGTGTTGTAAAATTCTCAGATGTTACAGATCTGCTTGTGCATTGGTTTCTATGATGTTGCGAGATGGCTTTTACCCTGTAACAGTAACTTACACTGCTCTCATAAAGACTTTGTTGGAAGATGATATCATTGATGAAGCACTGAATCTTTTGGATCAAGCCAGCTCAGAAGGGAATAAACTTGATACTTTAGTTTTCAATACCATTCTTCGAAAAGCCTGTGAAAAGGAACTGATTGATGTAGTTGAGTTTCTTGTTGAGTGGATGCACCAAGAAAAAATCCGGCCTGATTCGGGGACGTGCTCTTCTGTTTTCACTGCATATATGAACTGTGGTTTTTACAGCACAGCCATGGAAGCATTGCAGGTTTTGAGTATGCGTATAATATGTGACGAAGATGGAAGCTGTTCAGAAAAGACAAACGTTGAGGACGACTATATCTTTGCTGAAGACAAGGGAGCTGAATCCCGTATAATCCAGCATTTTAAAGATTCTAAAGAGGACTTGGCTGTTGCCCTACTGAATTTAAGATGGTGCGCGGTGCTTGGCTTCCCAATTTCTTGGTTGCCTGATCAAAGCCCGTGGGCAAAAAGACTCTCAGCTAACTATACTGCCAGGATAGGAGCTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

807

Amino Acids

91.15

Weight (kDa)

6.47

Isoelectric Point (pI)

40.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	557 - 600	4.7e-11	PPR repeat family
TPR_24	PF23276	560 - 670	1.8e-06	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76280 AT1G76280 AT1G76280 AT1G76280 AT1G76280
fragaria_vesca	FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510
malus_domestica	MD08G1002500.v1.1
prunus_persica	Prupe.2G013700_v2.0.a1 Prupe.2G013700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0270441 RchiOBHm_Chr6g0304231
rosa_laevigata	RLG00000011004 RLG00000013792 RLG00000035378
rosa_multiflora	Rmu_sc0009479.1_g000010 Rmu_ssc0000218.1_g000015
rosa_roxburghii	Rroxscaffold_7G00163950 Rroxscaffold_7G00197930
rosa_rugosa	Rorug05G0331600 Rorug05G0331700 Rorug06G0329000
rosa_samantha	Rh5AG395800 Rh6AG173300 Rh6AG442800 Rh6BG177200 Rh6BG459900 Rh6CG173000 Rh6CG455200 Rh6DG165400 Rh6DG442200
rosa_wichuraiana	Rw0G006810 Rw5G037260 Rw6G014750 Rw6G038390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2146
AccB7I	CCANNNNNTGG	1 cut(s)	967
AccBSI	CCGCTC	1 cut(s)	553
AccI	GTMKAC	1 cut(s)	477
AccII	CGCG	1 cut(s)	2330
AciI	CCGC	7 cut(s)	372, 553, 941, 964, 1360, 1625, 2330
AclI	AACGTT	1 cut(s)	2214
AclWI	GGATC	6 cut(s)	296, 951, 1281, 1347, 1600, 1953
AcoI	YGGCCR	2 cut(s)	15, 925
AcsI	RAATTY	7 cut(s)	157, 433, 916, 1161, 1186, 1803, 2314
AcuI	CTGAAG	1 cut(s)	2259
AfaI	GTAC	2 cut(s)	284, 502
AfiI	CCNNNNNNNGG	3 cut(s)	967, 1139, 2084
AflIII	ACRYGT	3 cut(s)	472, 1467, 1618
AjiI	CACGTC	2 cut(s)	294, 2091
AjnI	CCWGG	3 cut(s)	17, 1044, 2405
AloI	GAACNNNNNNTCC	2 cut(s)	879, 911
Alw21I	GWGCWC	1 cut(s)	2096
Alw26I	GTCTC	2 cut(s)	73, 1256
AlwI	GGATC	6 cut(s)	296, 951, 1281, 1347, 1600, 1953
AlwNI	CAGNNNCTG	2 cut(s)	909, 1769
AoxI	GGCC	5 cut(s)	15, 232, 925, 1042, 2075
ApeKI	GCWGC	5 cut(s)	1177, 1322, 1417, 1487, 1769
ApoI	RAATTY	7 cut(s)	157, 433, 916, 1161, 1186, 1803, 2314
ArsI	GACNNNNNNTTYG	2 cut(s)	2216, 2248
Asp700I	GAANNNNTTC	2 cut(s)	778, 2197
AspLEI	GCGC	2 cut(s)	33, 2330
AsuC2I	CCSGG	1 cut(s)	1760
AsuHPI	GGTGA	1 cut(s)	288
AsuII	TTCGAA	1 cut(s)	2002
AsuNHI	GCTAGC	1 cut(s)	1366
BaeI	ACNNNNGTAYC	2 cut(s)	1968, 2001
BalI	TGGCCA	2 cut(s)	17, 927
BbsI	GAAGAC	1 cut(s)	2247
Bbv12I	GWGCWC	1 cut(s)	2096
BbvI	GCAGC	5 cut(s)	1189, 1334, 1429, 1474, 1756
BccI	CCATC	8 cut(s)	541, 917, 961, 1103, 1150, 1850, 2183, 2316
BceAI	ACGGC	1 cut(s)	1340
BcgI	CGANNNNNNTGC	2 cut(s)	142, 176
BciT130I	CCWGG	3 cut(s)	19, 1046, 2407
BciVI	GTATCC	1 cut(s)	398
BclI	TGATCA	1 cut(s)	2362
BcnI	CCSGG	1 cut(s)	1760
BcoDI	GTCTC	2 cut(s)	73, 1256
BfaI	CTAG	2 cut(s)	230, 1367
BfmI	CTRYAG	4 cut(s)	627, 664, 1064, 1506
BfuAI	ACCTGC	1 cut(s)	2146
BfuI	GTATCC	1 cut(s)	398
BglII	AGATCT	1 cut(s)	1820
BisI	GCNGC	6 cut(s)	554, 1178, 1323, 1418, 1488, 1770
BlpI	GCTNAGC	1 cut(s)	1050
BlsI	GCNGC	6 cut(s)	555, 1179, 1324, 1419, 1489, 1771
BmcAI	AGTACT	1 cut(s)	284
Bme1390I	CCNGG	4 cut(s)	19, 1046, 1760, 2407
BmgBI	CACGTC	2 cut(s)	294, 2091
BmrFI	CCNGG	4 cut(s)	19, 1046, 1760, 2407
BmsI	GCATC	5 cut(s)	1059, 1353, 1474, 1756, 2046
BmtI	GCTAGC	1 cut(s)	1370
BpiI	GAAGAC	1 cut(s)	2247
Bpu1102I	GCTNAGC	1 cut(s)	1050
Bpu14I	TTCGAA	1 cut(s)	2002
BpuEI	CTTGAG	1 cut(s)	581
BpuMI	CCSGG	1 cut(s)	1760
BsaJI	CCNNGG	3 cut(s)	1576, 2142, 2372
BsaWI	WCCGGW	1 cut(s)	463
Bsc4I	CCNNNNNNNGG	3 cut(s)	967, 1139, 2084
Bse1I	ACTGG	2 cut(s)	87, 118
Bse3DI	GCAATG	4 cut(s)	26, 36, 740, 2150
BseBI	CCWGG	3 cut(s)	19, 1046, 2407
BseDI	CCNNGG	3 cut(s)	1576, 2142, 2372
BseGI	GGATG	8 cut(s)	343, 928, 972, 1161, 1294, 1368, 1596, 2061
BseLI	CCNNNNNNNGG	3 cut(s)	967, 1139, 2084
BseMI	GCAATG	4 cut(s)	26, 36, 740, 2150
BseMII	CTCAG	7 cut(s)	66, 662, 1041, 1251, 1822, 1971, 2403
BseNI	ACTGG	2 cut(s)	87, 118
BseRI	GAGGAG	1 cut(s)	428
BseXI	GCAGC	5 cut(s)	1189, 1334, 1429, 1474, 1756
BsgI	GTGCAG	1 cut(s)	1044
Bsh1236I	CGCG	1 cut(s)	2330
BshFI	GGCC	5 cut(s)	17, 234, 927, 1044, 2077
BsiHKAI	GWGCWC	1 cut(s)	2096
BsiSI	CCGG	3 cut(s)	464, 1760, 2074
BslFI	GGGAC	3 cut(s)	881, 1742, 2101
BslI	CCNNNNNNNGG	3 cut(s)	967, 1139, 2084
BsmAI	GTCTC	2 cut(s)	73, 1256
BsmFI	GGGAC	3 cut(s)	881, 1742, 2101
BsmI	GAATGC	3 cut(s)	1450, 1533, 1687
BsnI	GGCC	5 cut(s)	17, 234, 927, 1044, 2077
Bsp119I	TTCGAA	1 cut(s)	2002
Bsp1286I	GDGCHC	1 cut(s)	2096
Bsp143I	GATC	9 cut(s)	301, 943, 1201, 1273, 1339, 1605, 1820, 1945, 2362
Bsp1720I	GCTNAGC	1 cut(s)	1050
Bsp19I	CCATGG	1 cut(s)	2142
BspACI	CCGC	7 cut(s)	372, 553, 941, 964, 1360, 1625, 2330
BspANI	GGCC	5 cut(s)	17, 234, 927, 1044, 2077
BspCNI	CTCAG	7 cut(s)	67, 663, 1042, 1252, 1821, 1970, 2402
BspFNI	CGCG	1 cut(s)	2330
BspMI	ACCTGC	1 cut(s)	2146
BspOI	GCTAGC	1 cut(s)	1370
BspPI	GGATC	6 cut(s)	296, 951, 1281, 1347, 1600, 1953
BspQI	GCTCTTC	1 cut(s)	2101
BspT104I	TTCGAA	1 cut(s)	2002
BsrBI	CCGCTC	1 cut(s)	553
BsrDI	GCAATG	4 cut(s)	26, 36, 740, 2150
BsrI	ACTGG	2 cut(s)	87, 118
BssECI	CCNNGG	3 cut(s)	1576, 2142, 2372
BssMI	GATC	9 cut(s)	301, 943, 1201, 1273, 1339, 1605, 1820, 1945, 2362
BssT1I	CCWWGG	2 cut(s)	1576, 2142
Bst2UI	CCWGG	3 cut(s)	19, 1046, 2407
Bst4CI	ACNGT	8 cut(s)	287, 668, 848, 891, 1544, 1681, 1876, 2123
Bst6I	CTCTTC	2 cut(s)	1452, 2101
BstAPI	GCANNNNNTGC	1 cut(s)	1769
BstBI	TTCGAA	1 cut(s)	2002
BstC8I	GCNNGC	4 cut(s)	603, 733, 1368, 1954
BstDEI	CTNAG	7 cut(s)	75, 671, 1050, 1260, 1808, 1957, 2389
BstDSI	CCRYGG	2 cut(s)	2142, 2372
BstF5I	GGATG	8 cut(s)	343, 928, 972, 1161, 1294, 1368, 1596, 2061
BstFNI	CGCG	1 cut(s)	2330
BstHHI	GCGC	2 cut(s)	33, 2330
BstKTI	GATC	9 cut(s)	304, 946, 1204, 1276, 1342, 1608, 1823, 1948, 2365
BstMAI	GTCTC	2 cut(s)	73, 1256
BstMBI	GATC	9 cut(s)	301, 943, 1201, 1273, 1339, 1605, 1820, 1945, 2362
BstMWI	GCNNNNNNNGC	6 cut(s)	598, 1310, 1319, 1580, 1769, 2147
BstNI	CCWGG	3 cut(s)	19, 1046, 2407
BstNSI	RCATGY	6 cut(s)	476, 735, 1304, 1329, 1471, 1622
BstSCI	CCNGG	4 cut(s)	17, 1044, 1758, 2405
BstSFI	CTRYAG	4 cut(s)	627, 664, 1064, 1506
BstUI	CGCG	1 cut(s)	2330
BstV1I	GCAGC	5 cut(s)	1189, 1334, 1429, 1474, 1756
BstV2I	GAAGAC	1 cut(s)	2247
BstX2I	RGATCY	1 cut(s)	1820
BstXI	CCANNNNNNTGG	2 cut(s)	1404, 2352
BstYI	RGATCY	1 cut(s)	1820
BsuI	GTATCC	1 cut(s)	398
BsuRI	GGCC	5 cut(s)	17, 234, 927, 1044, 2077
BtgI	CCRYGG	2 cut(s)	2142, 2372
BtrI	CACGTC	2 cut(s)	294, 2091
BtsCI	GGATG	8 cut(s)	343, 928, 972, 1161, 1294, 1368, 1596, 2061
BtsI	GCAGTG	4 cut(s)	587, 1156, 1884, 2106
BtsIMutI	CAGTG	6 cut(s)	587, 1156, 1686, 1884, 1931, 2106
BveI	ACCTGC	1 cut(s)	2146
Cac8I	GCNNGC	4 cut(s)	603, 733, 1368, 1954
CaiI	CAGNNNCTG	2 cut(s)	909, 1769
CfoI	GCGC	2 cut(s)	33, 2330
Csp6I	GTAC	2 cut(s)	283, 501
CspCI	CAANNNNNGTGG	2 cut(s)	2354, 2389
CviQI	GTAC	2 cut(s)	283, 501
DdeI	CTNAG	7 cut(s)	75, 671, 1050, 1260, 1808, 1957, 2389
DpnI	GATC	9 cut(s)	303, 945, 1203, 1275, 1341, 1607, 1822, 1947, 2364
DpnII	GATC	9 cut(s)	301, 943, 1201, 1273, 1339, 1605, 1820, 1945, 2362
DraI	TTTAAA	4 cut(s)	723, 1191, 1735, 2278
EaeI	YGGCCR	2 cut(s)	15, 925
Eam1104I	CTCTTC	2 cut(s)	1452, 2101
EarI	CTCTTC	2 cut(s)	1452, 2101
EciI	GGCGGA	1 cut(s)	1640
Eco130I	CCWWGG	2 cut(s)	1576, 2142
Eco32I	GATATC	1 cut(s)	1918
Eco57I	CTGAAG	1 cut(s)	2259
EcoRII	CCWGG	3 cut(s)	17, 1044, 2405
EcoRV	GATATC	1 cut(s)	1918
EcoT14I	CCWWGG	2 cut(s)	1576, 2142
ErhI	CCWWGG	2 cut(s)	1576, 2142
FaqI	GGGAC	3 cut(s)	881, 1742, 2101
FauNDI	CATATG	4 cut(s)	583, 1198, 1411, 1453
FbaI	TGATCA	1 cut(s)	2362
FblI	GTMKAC	1 cut(s)	477
Fnu4HI	GCNGC	6 cut(s)	554, 1178, 1323, 1418, 1488, 1770
FokI	GGATG	8 cut(s)	350, 935, 979, 1168, 1281, 1375, 1603, 2068
Fsp4HI	GCNGC	6 cut(s)	554, 1178, 1323, 1418, 1488, 1770
FspBI	CTAG	2 cut(s)	230, 1367
GlaI	GCGC	2 cut(s)	32, 2329
GluI	GCNGC	6 cut(s)	554, 1178, 1323, 1418, 1488, 1770
HaeIII	GGCC	5 cut(s)	17, 234, 927, 1044, 2077
HapII	CCGG	3 cut(s)	464, 1760, 2074
HhaI	GCGC	2 cut(s)	33, 2330
Hin6I	GCGC	2 cut(s)	31, 2328
HinP1I	GCGC	2 cut(s)	31, 2328
HindIII	AAGCTT	3 cut(s)	321, 495, 599
HpaII	CCGG	3 cut(s)	464, 1760, 2074
HphI	GGTGA	1 cut(s)	288
Hpy166II	GTNNAC	3 cut(s)	478, 638, 1002
Hpy188I	TCNGA	7 cut(s)	186, 357, 672, 1121, 1811, 1960, 2203
Hpy188III	TCNNGA	6 cut(s)	93, 119, 819, 903, 1003, 1133
Hpy8I	GTNNAC	3 cut(s)	478, 638, 1002
HpyAV	CCTTC	5 cut(s)	640, 871, 909, 1580, 1955
HpyCH4III	ACNGT	8 cut(s)	287, 668, 848, 891, 1544, 1681, 1876, 2123
HpyCH4IV	ACGT	5 cut(s)	246, 293, 1440, 2090, 2214
HpyF10VI	GCNNNNNNNGC	6 cut(s)	598, 1310, 1319, 1580, 1769, 2147
HpyF3I	CTNAG	7 cut(s)	75, 671, 1050, 1260, 1808, 1957, 2389
HpySE526I	ACGT	5 cut(s)	246, 293, 1440, 2090, 2214
HspAI	GCGC	2 cut(s)	31, 2328
Ksp22I	TGATCA	1 cut(s)	2362
Kzo9I	GATC	9 cut(s)	301, 943, 1201, 1273, 1339, 1605, 1820, 1945, 2362
LguI	GCTCTTC	1 cut(s)	2101
LmnI	GCTCC	9 cut(s)	38, 137, 254, 374, 550, 982, 1580, 2249, 2414
Lsp1109I	GCAGC	5 cut(s)	1189, 1334, 1429, 1474, 1756
LweI	GCATC	5 cut(s)	1059, 1353, 1474, 1756, 2046
MaeI	CTAG	2 cut(s)	230, 1367
MaeII	ACGT	5 cut(s)	246, 293, 1440, 2090, 2214
MalI	GATC	9 cut(s)	303, 945, 1203, 1275, 1341, 1607, 1822, 1947, 2364
MbiI	CCGCTC	1 cut(s)	553
MboI	GATC	9 cut(s)	301, 943, 1201, 1273, 1339, 1605, 1820, 1945, 2362
MfeI	CAATTG	1 cut(s)	1125
MflI	RGATCY	1 cut(s)	1820
MhlI	GDGCHC	1 cut(s)	2096
MlsI	TGGCCA	2 cut(s)	17, 927
MluNI	TGGCCA	2 cut(s)	17, 927
MlyI	GAGTC	3 cut(s)	235, 1258, 2379
MmeI	TCCRAC	1 cut(s)	1887
Mox20I	TGGCCA	2 cut(s)	17, 927
MroXI	GAANNNNTTC	2 cut(s)	778, 2197
MscI	TGGCCA	2 cut(s)	17, 927
MslI	CAYNNNNRTG	3 cut(s)	1104, 1299, 2141
Msp20I	TGGCCA	2 cut(s)	17, 927
MspA1I	CMGCKG	2 cut(s)	964, 1420
MspI	CCGG	3 cut(s)	464, 1760, 2074
MspR9I	CCNGG	4 cut(s)	19, 1046, 1760, 2407
MunI	CAATTG	1 cut(s)	1125
Mva1269I	GAATGC	3 cut(s)	1450, 1533, 1687
MvaI	CCWGG	3 cut(s)	19, 1046, 2407
MvnI	CGCG	1 cut(s)	2330
MwoI	GCNNNNNNNGC	6 cut(s)	598, 1310, 1319, 1580, 1769, 2147
NciI	CCSGG	1 cut(s)	1760
NcoI	CCATGG	1 cut(s)	2142
NdeI	CATATG	4 cut(s)	583, 1198, 1411, 1453
NdeII	GATC	9 cut(s)	301, 943, 1201, 1273, 1339, 1605, 1820, 1945, 2362
NheI	GCTAGC	1 cut(s)	1366
NmuCI	GTSAC	6 cut(s)	294, 577, 1328, 1390, 1473, 2180
NspI	RCATGY	6 cut(s)	476, 735, 1304, 1329, 1471, 1622
NspV	TTCGAA	1 cut(s)	2002
PaeI	GCATGC	1 cut(s)	735
PciI	ACATGT	3 cut(s)	472, 1467, 1618
PciSI	GCTCTTC	1 cut(s)	2101
PcsI	WCGNNNNNNNCGW	1 cut(s)	2220
PctI	GAATGC	3 cut(s)	1450, 1533, 1687
PdmI	GAANNNNTTC	2 cut(s)	778, 2197
PfeI	GAWTC	8 cut(s)	22, 44, 143, 1630, 1936, 2081, 2255, 2282
PflMI	CCANNNNNTGG	1 cut(s)	967
PkrI	GCNGC	6 cut(s)	555, 1179, 1324, 1419, 1489, 1771
PleI	GAGTC	3 cut(s)	234, 1258, 2379
PpsI	GAGTC	3 cut(s)	234, 1258, 2379
PscI	ACATGT	3 cut(s)	472, 1467, 1618
Psp1406I	AACGTT	1 cut(s)	2214
Psp6I	CCWGG	3 cut(s)	17, 1044, 2405
PspGI	CCWGG	3 cut(s)	17, 1044, 2405
PstNI	CAGNNNCTG	2 cut(s)	909, 1769
PsuI	RGATCY	1 cut(s)	1820
PvuII	CAGCTG	1 cut(s)	1420
RsaI	GTAC	2 cut(s)	284, 502
RsaNI	GTAC	2 cut(s)	283, 501
RseI	CAYNNNNRTG	3 cut(s)	1104, 1299, 2141
SapI	GCTCTTC	1 cut(s)	2101
SatI	GCNGC	6 cut(s)	554, 1178, 1323, 1418, 1488, 1770
Sau3AI	GATC	9 cut(s)	301, 943, 1201, 1273, 1339, 1605, 1820, 1945, 2362
ScaI	AGTACT	1 cut(s)	284
SchI	GAGTC	3 cut(s)	235, 1258, 2379
ScrFI	CCNGG	4 cut(s)	19, 1046, 1760, 2407
SduI	GDGCHC	1 cut(s)	2096
SfaNI	GCATC	5 cut(s)	1059, 1353, 1474, 1756, 2046
SfcI	CTRYAG	4 cut(s)	627, 664, 1064, 1506
SfuI	TTCGAA	1 cut(s)	2002
SmiMI	CAYNNNNRTG	3 cut(s)	1104, 1299, 2141
SmlI	CTYRAG	1 cut(s)	596
SmoI	CTYRAG	1 cut(s)	596
SphI	GCATGC	1 cut(s)	735
SsiI	CCGC	7 cut(s)	372, 553, 941, 964, 1360, 1625, 2330
SspI	AATATT	1 cut(s)	978
SspMI	CTAG	2 cut(s)	230, 1367
StyD4I	CCNGG	4 cut(s)	17, 1044, 1758, 2405
StyI	CCWWGG	2 cut(s)	1576, 2142
TaaI	ACNGT	8 cut(s)	287, 668, 848, 891, 1544, 1681, 1876, 2123
TaiI	ACGT	5 cut(s)	249, 296, 1443, 2093, 2217
TaqI	TCGA	3 cut(s)	94, 118, 2002
TatI	WGTACW	1 cut(s)	282
TauI	GCSGC	1 cut(s)	556
TfiI	GAWTC	8 cut(s)	22, 44, 143, 1630, 1936, 2081, 2255, 2282
TscAI	CASTG	6 cut(s)	594, 1156, 1686, 1891, 1938, 2113
TseFI	GTSAC	6 cut(s)	294, 577, 1328, 1390, 1473, 2180
TseI	GCWGC	5 cut(s)	1177, 1322, 1417, 1487, 1769
Tsp45I	GTSAC	6 cut(s)	294, 577, 1328, 1390, 1473, 2180
TspDTI	ATGAA	9 cut(s)	170, 588, 900, 1391, 1470, 1571, 1757, 1941, 2132
TspGWI	ACGGA	1 cut(s)	1510
TspRI	CASTG	6 cut(s)	594, 1156, 1686, 1891, 1938, 2113
Van91I	CCANNNNNTGG	1 cut(s)	967
XapI	RAATTY	7 cut(s)	157, 433, 916, 1161, 1186, 1803, 2314
XceI	RCATGY	6 cut(s)	476, 735, 1304, 1329, 1471, 1622
XcmI	CCANNNNNNNNNTGG	2 cut(s)	535, 1106
XmiI	GTMKAC	1 cut(s)	477
XmnI	GAANNNNTTC	2 cut(s)	778, 2197
XspI	CTAG	2 cut(s)	230, 1367
ZrmI	AGTACT	1 cut(s)	284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.