Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001709

Physical Location & Seq

Genomic Coordinates Reverse (-)

65587475 .. 65595277

Gene Structure 7803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G037260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGATTAACGTTTTGGGTACAATTCGGCCACCGCCAAGGCCACTAGCCAGGATTCCATTGCGCTCCATTGCAGAATCTTTTTCACACCTCCACCATGGACGAAGAATTGTTGCTGAGAGACTGGACTATTCTCGAACTCTTACTATTTCAACCGGTCGAGATGTTTTATGGAATGGAGCAGAATCAACTACGATGAATTTGCAGATACAAATTGTTAAGGCTCTGAAATTGGGTAAAAGAGGCGAAGCCTCCAATCTTCTTTTGAGTCTAGGCCAGGGAAATGACGTTAAAGGAGCTGATGATTTCTTGCATATTCTAAAGTACTGTGCCACGTCACCTGATCCTTTGTTTGTCATGGAAGCTTGGGCAATAATGGATGAGAAAGAGATTAGTCTGAATAGCCTTTGCTCCGCGCTTATGGTGGAAGCTCTATGTAATGGAGGATACTTGGAGGAGGCATTAAAATTGATAAATTTTCTTAAACAAAGTCATGGTATCTATCCGGTTCTACATGTCTACAACACTTTTTTGAAAGCTTGTACCAAAATGCAAAGTATGGTTTATGCCGATCAGTGTTTGGAATTGATGGAGCGACAAAAGGTGGGGAAGAATGAAGTTACATATGCACTGCTTCTCAAGCTTGCAGTTTGGCAACAAAACCTGTATGTAGCCCGTGAACTTTGGAAGGACTATATCAAACACTACAGTCTGAGCATTATCCCTCTGCAAAAGTTTCTTTTGTCCTTTAGTAAGTTGGGAGATTTAAAATCTGCATGCAAGACATTGCAATATATGGTGGCTTTAGTCATCAGGGGAAAGGCTTCTGTTAATAAATCTATTAAGGGAAAGTTGTATTCTTCAAGATTGGACATTCCTATACCTTTGAACTGCGAATTAGGCTTGAAGAAACTTAATTTGGAGGAGAATGAACAGTCTGTCCCTTCCAGATACTGCGAGAATTTGGATGGCCATGATGTTAGTGCGGATCAATGCACTAGTTTTGGCTTGGGTTTTGGAGAAACTAAGAGTGTTCCAGCGGATGGTTTTAATATTGATATAAGTACTCCTGTTATGGAGCTTTTGAGATGTTCGTTCACGAACTTGATATATGCTTGTGCAGAATTAAGAAATGGTGGCCTGGCTGAGCAGTTAGTCCTACAGATGCAAAAATTGGGGTTTCAAATAAATAGCCATGTGTATGATGGCTTAATCAGAGCAATTGTTCCAGAAAGAGGTTTCAGCAGTGGGATGGAAATTTTGAAAAGTATGCAGCAGAGAAATTTGAAGCCATATGATCGCACTCTTGCAACCCTTTCAATAGGTTGTAGCAAGGCATTAGAATTGGGTTTAGCTGAGACTCTGCTGGATCAAATATCTGTGTATTCACATCCACATGCTTTTAATGCTTTTCTTGTAGCATGTGACATTAGGGATCAACCTGAAAATGCGGTGCGGATGCTAGCTAAAATGAAACATCTACAAGTCACGCCAAATATATGGACATATGAGCAGCTGTTTTCCTTGTTTGGTAACGTGAATGCCCCATATGAAGAGGGCAACATGTTGTCACAGGTAGATGCTGCTAAACGGATTAAAGCTATAGAAATGGATATGGCGAACTATGGCATTCAGCACAGTTTTGTGTCAATGAATAACTTGCTGAAAGCCCTTGGAGCAGAAGGGTTGACGAGAGAGCTGATCCATTATTTACATGTGGCGGAGAATCTTTTTTGTCGTAATCACATTTATCTGGGAACACCTATCTATAATACGGTGTTGCATTCACTTGTTGAGAGTGAGGAAAGCCAAATGGCAATTAAGATGTTTAAAAACATGAAGTCATGTGGTGTACCAGCAGATGCTGCAACTTATACTATAATGATTAAGTGTTGTAAAATTCTCAGATGTTATAGATCTGCTTGTGCATTGGTTTCTATGATGTTGCGAGATGGCTTTTACCCTCTCACAATAACCTACACTGCTCTCATAAAGACTTTGTTGGAAGATGATATCATTGATGAAGCACTGAATCTTTTGGATCAAGCCAGCTCAGAAGGGAATAAACTTGATACTTTAGTTTTCAATACCATTCTTCGAAAAGCCTGGGAAAAAGGTATATCATGTGAACTGATTGATGTAGTTGAGTTTCTTGTTGAGTGGATGCACCAAGAAAAAATCCGGCCTGATTCGGGGACGTGCTCTTCTGTTTTCACTGCATATACGAACTGTGGTTTTTACAGCACAGCCATGGAAGCATTGCAGATTTTGAGTATGCGTATAATATGTGACGAAGATGGAAGCTACGAGGGAGCTGAATCCCGTATAATCCAGCATTTTAAAGATTCTAAAGAGGACTTGGCTGTCGCCCTACTGAATTTAAGATGGTGTGCGGTGCTTGGCTTCCCAATTTCTTGGTTGCCTGATCAAAGCCCGTGGGCAAAAAGACTCTCAACTAACTATACTGCCAGGAGGAATGGAGCTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

828

Amino Acids

92.99

Weight (kDa)

6.69

Isoelectric Point (pI)

39.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	588 - 631	1e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76280 AT1G76280 AT1G76280 AT1G76280 AT1G76280
fragaria_vesca	FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510 FvH4_2g37510
malus_domestica	MD08G1002500.v1.1
prunus_persica	Prupe.2G013700_v2.0.a1 Prupe.2G013700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0270441 RchiOBHm_Chr6g0304231
rosa_laevigata	RLG00000011004 RLG00000013792 RLG00000035378
rosa_multiflora	Rmu_sc0009479.1_g000010 Rmu_ssc0000218.1_g000015
rosa_roxburghii	Rroxscaffold_7G00163950 Rroxscaffold_7G00197930
rosa_rugosa	Rorug05G0331600 Rorug05G0331700 Rorug06G0329000
rosa_samantha	Rh5AG395800 Rh6AG173300 Rh6AG442800 Rh6BG177200 Rh6BG459900 Rh6CG173000 Rh6CG455200 Rh6DG165400 Rh6DG442200
rosa_wichuraiana	Rw0G006810 Rw5G037260 Rw6G014750 Rw6G038390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2360
AccB7I	CCANNNNNTGG	1 cut(s)	1040
AccI	GTMKAC	1 cut(s)	516
AccII	CGCG	1 cut(s)	413
AciI	CCGC	8 cut(s)	32, 411, 983, 1037, 1448, 1453, 1718, 2390
AclI	AACGTT	1 cut(s)	9
AclWI	GGATC	6 cut(s)	335, 993, 1374, 1440, 1693, 2046
AcoI	YGGCCR	2 cut(s)	26, 967
AcsI	RAATTY	7 cut(s)	196, 472, 958, 1254, 1279, 1896, 2374
AfaI	GTAC	5 cut(s)	19, 323, 541, 1063, 1851
AfiI	CCNNNNNNNGG	3 cut(s)	1040, 1232, 2189
AflIII	ACRYGT	3 cut(s)	511, 1560, 1711
AgeI	ACCGGT	1 cut(s)	152
AhlI	ACTAGT	1 cut(s)	995
AjiI	CACGTC	2 cut(s)	333, 2196
AjnI	CCWGG	5 cut(s)	47, 273, 1137, 2102, 2465
AjuI	GAANNNNNNNTTGG	2 cut(s)	899, 931
AloI	GAACNNNNNNTCC	2 cut(s)	921, 953
Alw21I	GWGCWC	1 cut(s)	2201
Alw26I	GTCTC	2 cut(s)	112, 1349
AlwI	GGATC	6 cut(s)	335, 993, 1374, 1440, 1693, 2046
AlwNI	CAGNNNCTG	2 cut(s)	951, 1862
AoxI	GGCC	6 cut(s)	26, 38, 271, 967, 1135, 2180
ApeKI	GCWGC	4 cut(s)	1270, 1510, 1580, 1862
ApoI	RAATTY	7 cut(s)	196, 472, 958, 1254, 1279, 1896, 2374
AsiGI	ACCGGT	1 cut(s)	152
Asp700I	GAANNNNTTC	1 cut(s)	820
AspLEI	GCGC	2 cut(s)	63, 415
AsuHPI	GGTGA	1 cut(s)	327
AsuII	TTCGAA	1 cut(s)	2095
AsuNHI	GCTAGC	1 cut(s)	1459
BaeI	ACNNNNGTAYC	2 cut(s)	2061, 2094
BalI	TGGCCA	1 cut(s)	969
Bbv12I	GWGCWC	1 cut(s)	2201
BbvI	GCAGC	4 cut(s)	1282, 1522, 1567, 1849
BccI	CCATC	8 cut(s)	580, 959, 1034, 1196, 1243, 1943, 2288, 2376
BcgI	CGANNNNNNTGC	2 cut(s)	181, 215
BciT130I	CCWGG	5 cut(s)	49, 275, 1139, 2104, 2467
BciVI	GTATCC	1 cut(s)	437
BclI	TGATCA	1 cut(s)	2422
BcoDI	GTCTC	2 cut(s)	112, 1349
BcuI	ACTAGT	1 cut(s)	995
BfaI	CTAG	4 cut(s)	44, 269, 996, 1460
BfmI	CTRYAG	3 cut(s)	703, 1157, 1599
BfuI	GTATCC	1 cut(s)	437
BglII	AGATCT	1 cut(s)	1913
BisI	GCNGC	4 cut(s)	1271, 1511, 1581, 1863
BlpI	GCTNAGC	1 cut(s)	1143
BlsI	GCNGC	4 cut(s)	1272, 1512, 1582, 1864
BmcAI	AGTACT	2 cut(s)	323, 1063
Bme1390I	CCNGG	5 cut(s)	49, 275, 1139, 2104, 2467
BmgBI	CACGTC	2 cut(s)	333, 2196
BmrFI	CCNGG	5 cut(s)	49, 275, 1139, 2104, 2467
BmsI	GCATC	5 cut(s)	1152, 1446, 1567, 1849, 2151
BmtI	GCTAGC	1 cut(s)	1463
Bpu1102I	GCTNAGC	1 cut(s)	1143
Bpu14I	TTCGAA	1 cut(s)	2095
BpuEI	CTTGAG	1 cut(s)	620
BsaJI	CCNNGG	7 cut(s)	35, 94, 274, 1669, 2103, 2247, 2432
BsaWI	WCCGGW	2 cut(s)	152, 502
Bsc4I	CCNNNNNNNGG	3 cut(s)	1040, 1232, 2189
Bse118I	RCCGGY	1 cut(s)	152
Bse1I	ACTGG	1 cut(s)	126
Bse3DI	GCAATG	4 cut(s)	56, 66, 782, 2255
BseBI	CCWGG	5 cut(s)	49, 275, 1139, 2104, 2467
BseDI	CCNNGG	7 cut(s)	35, 94, 274, 1669, 2103, 2247, 2432
BseGI	GGATG	7 cut(s)	382, 970, 1045, 1254, 1387, 1461, 2166
BseLI	CCNNNNNNNGG	3 cut(s)	1040, 1232, 2189
BseMI	GCAATG	4 cut(s)	56, 66, 782, 2255
BseMII	CTCAG	6 cut(s)	105, 701, 1134, 1344, 1915, 2064
BseNI	ACTGG	1 cut(s)	126
BseRI	GAGGAG	2 cut(s)	467, 935
BseXI	GCAGC	4 cut(s)	1282, 1522, 1567, 1849
BsgI	GTGCAG	1 cut(s)	1137
Bsh1236I	CGCG	1 cut(s)	413
Bsh1285I	CGRYCG	1 cut(s)	157
BshFI	GGCC	6 cut(s)	28, 40, 273, 969, 1137, 2182
BshTI	ACCGGT	1 cut(s)	152
BsiEI	CGRYCG	1 cut(s)	157
BsiHKAI	GWGCWC	1 cut(s)	2201
BsiSI	CCGG	3 cut(s)	153, 503, 2179
BslFI	GGGAC	2 cut(s)	923, 2206
BslI	CCNNNNNNNGG	3 cut(s)	1040, 1232, 2189
BsmAI	GTCTC	2 cut(s)	112, 1349
BsmFI	GGGAC	2 cut(s)	923, 2206
BsmI	GAATGC	3 cut(s)	1543, 1626, 1780
BsnI	GGCC	6 cut(s)	28, 40, 273, 969, 1137, 2182
Bsp119I	TTCGAA	1 cut(s)	2095
Bsp1286I	GDGCHC	1 cut(s)	2201
Bsp1720I	GCTNAGC	1 cut(s)	1143
Bsp19I	CCATGG	2 cut(s)	94, 2247
BspACI	CCGC	8 cut(s)	32, 411, 983, 1037, 1448, 1453, 1718, 2390
BspANI	GGCC	6 cut(s)	28, 40, 273, 969, 1137, 2182
BspCNI	CTCAG	6 cut(s)	106, 702, 1135, 1345, 1914, 2063
BspFNI	CGCG	1 cut(s)	413
BspOI	GCTAGC	1 cut(s)	1463
BspPI	GGATC	6 cut(s)	335, 993, 1374, 1440, 1693, 2046
BspQI	GCTCTTC	1 cut(s)	2206
BspT104I	TTCGAA	1 cut(s)	2095
BsrDI	GCAATG	4 cut(s)	56, 66, 782, 2255
BsrFI	RCCGGY	1 cut(s)	152
BsrI	ACTGG	1 cut(s)	126
BssAI	RCCGGY	1 cut(s)	152
BssECI	CCNNGG	7 cut(s)	35, 94, 274, 1669, 2103, 2247, 2432
BssT1I	CCWWGG	4 cut(s)	35, 94, 1669, 2247
Bst2UI	CCWGG	5 cut(s)	49, 275, 1139, 2104, 2467
Bst4CI	ACNGT	6 cut(s)	326, 707, 933, 1637, 1774, 2228
Bst6I	CTCTTC	2 cut(s)	1545, 2206
BstAPI	GCANNNNNTGC	1 cut(s)	1862
BstBI	TTCGAA	1 cut(s)	2095
BstC8I	GCNNGC	4 cut(s)	642, 775, 1461, 2047
BstDEI	CTNAG	7 cut(s)	114, 710, 1023, 1143, 1353, 1901, 2050
BstDSI	CCRYGG	3 cut(s)	94, 2247, 2432
BstF5I	GGATG	7 cut(s)	382, 970, 1045, 1254, 1387, 1461, 2166
BstFNI	CGCG	1 cut(s)	413
BstHHI	GCGC	2 cut(s)	63, 415
BstMAI	GTCTC	2 cut(s)	112, 1349
BstMCI	CGRYCG	1 cut(s)	157
BstMWI	GCNNNNNNNGC	6 cut(s)	637, 897, 1403, 1673, 1862, 2252
BstNI	CCWGG	5 cut(s)	49, 275, 1139, 2104, 2467
BstNSI	RCATGY	6 cut(s)	515, 777, 1397, 1422, 1564, 1715
BstSCI	CCNGG	5 cut(s)	47, 273, 1137, 2102, 2465
BstSFI	CTRYAG	3 cut(s)	703, 1157, 1599
BstUI	CGCG	1 cut(s)	413
BstV1I	GCAGC	4 cut(s)	1282, 1522, 1567, 1849
BstX2I	RGATCY	1 cut(s)	1913
BstXI	CCANNNNNNTGG	2 cut(s)	1497, 2412
BstYI	RGATCY	1 cut(s)	1913
BsuI	GTATCC	1 cut(s)	437
BsuRI	GGCC	6 cut(s)	28, 40, 273, 969, 1137, 2182
BtgI	CCRYGG	3 cut(s)	94, 2247, 2432
BtrI	CACGTC	2 cut(s)	333, 2196
BtsCI	GGATG	7 cut(s)	382, 970, 1045, 1254, 1387, 1461, 2166
BtsI	GCAGTG	4 cut(s)	626, 1249, 1977, 2211
BtsIMutI	CAGTG	6 cut(s)	578, 626, 1249, 1977, 2024, 2211
Cac8I	GCNNGC	4 cut(s)	642, 775, 1461, 2047
CaiI	CAGNNNCTG	2 cut(s)	951, 1862
CfoI	GCGC	2 cut(s)	63, 415
Cfr10I	RCCGGY	1 cut(s)	152
Csp6I	GTAC	5 cut(s)	18, 322, 540, 1062, 1850
CspAI	ACCGGT	1 cut(s)	152
CspCI	CAANNNNNGTGG	2 cut(s)	2414, 2449
CviQI	GTAC	5 cut(s)	18, 322, 540, 1062, 1850
DdeI	CTNAG	7 cut(s)	114, 710, 1023, 1143, 1353, 1901, 2050
DraI	TTTAAA	3 cut(s)	765, 1828, 2338
DrdI	GACNNNNNNGTC	1 cut(s)	2360
DseDI	GACNNNNNNGTC	1 cut(s)	2360
EaeI	YGGCCR	2 cut(s)	26, 967
Eam1104I	CTCTTC	2 cut(s)	1545, 2206
EarI	CTCTTC	2 cut(s)	1545, 2206
EciI	GGCGGA	1 cut(s)	1733
Eco130I	CCWWGG	4 cut(s)	35, 94, 1669, 2247
Eco32I	GATATC	1 cut(s)	2011
EcoRII	CCWGG	5 cut(s)	47, 273, 1137, 2102, 2465
EcoRV	GATATC	1 cut(s)	2011
EcoT14I	CCWWGG	4 cut(s)	35, 94, 1669, 2247
ErhI	CCWWGG	4 cut(s)	35, 94, 1669, 2247
FaqI	GGGAC	2 cut(s)	923, 2206
FauNDI	CATATG	4 cut(s)	622, 1291, 1504, 1546
FbaI	TGATCA	1 cut(s)	2422
FblI	GTMKAC	1 cut(s)	516
Fnu4HI	GCNGC	4 cut(s)	1271, 1511, 1581, 1863
FokI	GGATG	7 cut(s)	389, 977, 1052, 1261, 1374, 1468, 2173
Fsp4HI	GCNGC	4 cut(s)	1271, 1511, 1581, 1863
FspBI	CTAG	4 cut(s)	44, 269, 996, 1460
GlaI	GCGC	2 cut(s)	62, 414
GluI	GCNGC	4 cut(s)	1271, 1511, 1581, 1863
HaeIII	GGCC	6 cut(s)	28, 40, 273, 969, 1137, 2182
HapII	CCGG	3 cut(s)	153, 503, 2179
HhaI	GCGC	2 cut(s)	63, 415
Hin6I	GCGC	2 cut(s)	61, 413
HinP1I	GCGC	2 cut(s)	61, 413
HincII	GTYRAC	1 cut(s)	1686
HindII	GTYRAC	1 cut(s)	1686
HindIII	AAGCTT	3 cut(s)	360, 534, 638
HpaII	CCGG	3 cut(s)	153, 503, 2179
HphI	GGTGA	1 cut(s)	327
Hpy166II	GTNNAC	6 cut(s)	517, 677, 1095, 1686, 1850, 2126
Hpy188I	TCNGA	6 cut(s)	225, 396, 711, 1214, 1904, 2053
Hpy188III	TCNNGA	6 cut(s)	132, 158, 861, 945, 1096, 1226
Hpy8I	GTNNAC	6 cut(s)	517, 677, 1095, 1686, 1850, 2126
HpyAV	CCTTC	4 cut(s)	679, 951, 1673, 2048
HpyCH4III	ACNGT	6 cut(s)	326, 707, 933, 1637, 1774, 2228
HpyCH4IV	ACGT	5 cut(s)	9, 285, 332, 1533, 2195
HpyF10VI	GCNNNNNNNGC	6 cut(s)	637, 897, 1403, 1673, 1862, 2252
HpyF3I	CTNAG	7 cut(s)	114, 710, 1023, 1143, 1353, 1901, 2050
HpySE526I	ACGT	5 cut(s)	9, 285, 332, 1533, 2195
HspAI	GCGC	2 cut(s)	61, 413
Ksp22I	TGATCA	1 cut(s)	2422
LguI	GCTCTTC	1 cut(s)	2206
LmnI	GCTCC	9 cut(s)	68, 176, 293, 413, 589, 1075, 1673, 2309, 2477
Lsp1109I	GCAGC	4 cut(s)	1282, 1522, 1567, 1849
LweI	GCATC	5 cut(s)	1152, 1446, 1567, 1849, 2151
MaeI	CTAG	4 cut(s)	44, 269, 996, 1460
MaeII	ACGT	5 cut(s)	9, 285, 332, 1533, 2195
MaeIII	GTNAC	7 cut(s)	333, 616, 1421, 1483, 1529, 1566, 2285
MfeI	CAATTG	1 cut(s)	1218
MflI	RGATCY	1 cut(s)	1913
MhlI	GDGCHC	1 cut(s)	2201
MlsI	TGGCCA	1 cut(s)	969
MluNI	TGGCCA	1 cut(s)	969
MlyI	GAGTC	3 cut(s)	274, 1351, 2439
MmeI	TCCRAC	1 cut(s)	1980
Mox20I	TGGCCA	1 cut(s)	969
MroXI	GAANNNNTTC	1 cut(s)	820
MscI	TGGCCA	1 cut(s)	969
MslI	CAYNNNNRTG	3 cut(s)	1197, 1392, 2246
Msp20I	TGGCCA	1 cut(s)	969
MspA1I	CMGCKG	2 cut(s)	1037, 1513
MspI	CCGG	3 cut(s)	153, 503, 2179
MspR9I	CCNGG	5 cut(s)	49, 275, 1139, 2104, 2467
MunI	CAATTG	1 cut(s)	1218
Mva1269I	GAATGC	3 cut(s)	1543, 1626, 1780
MvaI	CCWGG	5 cut(s)	49, 275, 1139, 2104, 2467
MvnI	CGCG	1 cut(s)	413
MwoI	GCNNNNNNNGC	6 cut(s)	637, 897, 1403, 1673, 1862, 2252
NcoI	CCATGG	2 cut(s)	94, 2247
NdeI	CATATG	4 cut(s)	622, 1291, 1504, 1546
NheI	GCTAGC	1 cut(s)	1459
NmuCI	GTSAC	5 cut(s)	333, 1421, 1483, 1566, 2285
NspI	RCATGY	6 cut(s)	515, 777, 1397, 1422, 1564, 1715
NspV	TTCGAA	1 cut(s)	2095
PaeI	GCATGC	1 cut(s)	777
PciI	ACATGT	3 cut(s)	511, 1560, 1711
PciSI	GCTCTTC	1 cut(s)	2206
PctI	GAATGC	3 cut(s)	1543, 1626, 1780
PdmI	GAANNNNTTC	1 cut(s)	820
PfeI	GAWTC	8 cut(s)	52, 74, 182, 1723, 2029, 2186, 2315, 2342
PflMI	CCANNNNNTGG	1 cut(s)	1040
PinAI	ACCGGT	1 cut(s)	152
PkrI	GCNGC	4 cut(s)	1272, 1512, 1582, 1864
PleI	GAGTC	3 cut(s)	273, 1351, 2439
PpsI	GAGTC	3 cut(s)	273, 1351, 2439
PscI	ACATGT	3 cut(s)	511, 1560, 1711
Psp1406I	AACGTT	1 cut(s)	9
Psp6I	CCWGG	5 cut(s)	47, 273, 1137, 2102, 2465
PspGI	CCWGG	5 cut(s)	47, 273, 1137, 2102, 2465
PstNI	CAGNNNCTG	2 cut(s)	951, 1862
PsuI	RGATCY	1 cut(s)	1913
PvuII	CAGCTG	1 cut(s)	1513
RsaI	GTAC	5 cut(s)	19, 323, 541, 1063, 1851
RsaNI	GTAC	5 cut(s)	18, 322, 540, 1062, 1850
RseI	CAYNNNNRTG	3 cut(s)	1197, 1392, 2246
SapI	GCTCTTC	1 cut(s)	2206
SatI	GCNGC	4 cut(s)	1271, 1511, 1581, 1863
ScaI	AGTACT	2 cut(s)	323, 1063
SchI	GAGTC	3 cut(s)	274, 1351, 2439
ScrFI	CCNGG	5 cut(s)	49, 275, 1139, 2104, 2467
SduI	GDGCHC	1 cut(s)	2201
SfaNI	GCATC	5 cut(s)	1152, 1446, 1567, 1849, 2151
SfcI	CTRYAG	3 cut(s)	703, 1157, 1599
SfuI	TTCGAA	1 cut(s)	2095
SmiMI	CAYNNNNRTG	3 cut(s)	1197, 1392, 2246
SmlI	CTYRAG	1 cut(s)	635
SmoI	CTYRAG	1 cut(s)	635
SpeI	ACTAGT	1 cut(s)	995
SphI	GCATGC	1 cut(s)	777
SsiI	CCGC	8 cut(s)	32, 411, 983, 1037, 1448, 1453, 1718, 2390
SspI	AATATT	1 cut(s)	1051
SspMI	CTAG	4 cut(s)	44, 269, 996, 1460
StyD4I	CCNGG	5 cut(s)	47, 273, 1137, 2102, 2465
StyI	CCWWGG	4 cut(s)	35, 94, 1669, 2247
TaaI	ACNGT	6 cut(s)	326, 707, 933, 1637, 1774, 2228
TaiI	ACGT	5 cut(s)	12, 288, 335, 1536, 2198
TaqI	TCGA	3 cut(s)	133, 157, 2095
TatI	WGTACW	2 cut(s)	321, 1061
TfiI	GAWTC	8 cut(s)	52, 74, 182, 1723, 2029, 2186, 2315, 2342
TscAI	CASTG	6 cut(s)	578, 633, 1249, 1984, 2031, 2218
TseFI	GTSAC	5 cut(s)	333, 1421, 1483, 1566, 2285
TseI	GCWGC	4 cut(s)	1270, 1510, 1580, 1862
Tsp45I	GTSAC	5 cut(s)	333, 1421, 1483, 1566, 2285
TspDTI	ATGAA	8 cut(s)	209, 627, 942, 1484, 1563, 1664, 1850, 2034
TspGWI	ACGGA	1 cut(s)	1603
TspRI	CASTG	6 cut(s)	578, 633, 1249, 1984, 2031, 2218
Van91I	CCANNNNNTGG	1 cut(s)	1040
XapI	RAATTY	7 cut(s)	196, 472, 958, 1254, 1279, 1896, 2374
XceI	RCATGY	6 cut(s)	515, 777, 1397, 1422, 1564, 1715
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1199
XmiI	GTMKAC	1 cut(s)	516
XmnI	GAANNNNTTC	1 cut(s)	820
XspI	CTAG	4 cut(s)	44, 269, 996, 1460
ZrmI	AGTACT	2 cut(s)	323, 1063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.