Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0004402

Physical Location & Seq

Genomic Coordinates Reverse (-)

2971352 .. 2974840

Gene Structure 3489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1040200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGGATGAGAGGCCCGAGACGGAGCTGATATCGATTCCGGCGACCCCACGCGGGGTGTCGACGCCGGAGATACAGACCCCATCTGGTCAGAGGTCCCCTCGTCTGCCGTCCAAGGAGGCGAAGTCGTCCACGGCCTGGACTCCGACGTCGTTCATCTCGCCGAGGTTCCTCAGCCCCATCGGCACGCCCATGAAGCGGGTGCTGGTCAACATGAAGGGATACTTGGAGGAGGTGGGCCACCTCACCAAGCTCAACCCGCAGGACGCGTGGCTTCCCATCACCGAATCCCGCAACGGCAACGCTCACTACGCTGCGTTTCATAACCTCAATGCCGGCGTTGGCTTCCAGGCCCTGGTGCTTCCCGTCGCCTTCTCTTTTCTCGGCTGGAGCTGGGGAACACTTTCCTTAACCATAGCCTACTTCTGGCAGCTGTACACATTGTGGATTCTAGTTCAGCTTCACGAAGCAGTCCCGGGAAAGCGGTACAACAGATATGTGGAGCTTGCACAAGCTGCATTTGGGGAAAGATTGGGAGTTTGGCTTGCTCTCTTCCCCACTGTCTATTTATCAGCAGGAACTGCAACAGCTTTAATTCTCATAGGAGGGGAGACCATGAAACTATTTTTCCAGATAGTTTGTGGACCGCTATGTTCGTCGAATCCCCTAACGACAGTTGAGTGGTACCTAGTGTTCACTTCGCTATGTATCGTTCTATCTCAGCTCCCAAACCTCAATTCGATTGCAGGACTTTCGCTCGTTGGGGCTGTGACCGCCATAACTTACTCTACAATGGTTTGGGTCCTCTCTGTTAGCCAGACAAGACCACCCACAATTTCGTATGAACCCATTTCGTTGCCAACCGCTTCGGCTTCTGTCTTTGCCGTCCTGAATGCTCTTGGTATTGTAGCCTTTGCTTTCAGGGGGCACAATTTAGTTCTCGAGATTCAGGCAACAATGCCATCGACCTTTAAGCACCCGGCTCATGTGCCAATGTGGAGGGGAGCCAAGGTTGCTTATTTCTTCATTGCCATGTGTTTGTTCCCTGTTGCAATTGGAGGCTTCTGGGCTTATGGAAACCTTATGCCTTCAGGAGGGATTCTCAATGCCCTGTACGGATTCCACAGCCATGACATTCCAAGAGGACTCCTTGCAATGTGTTTCCTACTAGTTGTGTTCAATTGCTTGAGCAGTTTCCAGATATACTCCATGCCAGTATTCGACAGTTTTGAAGCCGGTTACACCAGCCGCACCAATCGCCCTTGCTCAATTTGGGTCAGGTCTGGTTTCCGAGTTCTCTATGGATTCATCAACTTCTTCATAGGCGTGGCGCTCCCCTTCCTCTCCAGTCTTGCCGGTCTACTAGGAGGGCTCACGCTTCCGGTCACATTCGCCTATCCTTGCTTCATGTGGGTTCTTATTAAAAAACCCACAAAGTACAGCTTCAACTGGTATTTCCATTGGATCTTGGGCTGGTTGGGGATCGCCTTTAGCTTGGCATTTTCGATCGGAGGGGTATGGAGCATGGTGAACAGCGGACTTAAATTGAAGTTCTTCAAGCCGCCGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

523

Amino Acids

57.65

Weight (kDa)

9.36

Isoelectric Point (pI)

31.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aa_trans	PF01490	98 - 509	1.4e-58	Transmembrane amino acid transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47670
fragaria_vesca	FvH4_2g37660 FvH4_2g40670
malus_domestica	MD08G1004200.v1.1 MD08G1040200.v1.1 MD15G1034600.v1.1
prunus_persica	Prupe.1G356100_v2.0.a1 Prupe.1G388700_v2.0.a1
pyrus_communis	pycom08g03240 pycom15g03190
rosa_chinensis	RchiOBHm_Chr6g0299981 RchiOBHm_Chr6g0304071
rosa_laevigata	RLG00000011020 RLG00000011374
rosa_multiflora	Rmu_co8464929.1_g000001 Rmu_sc0001370.1_g000004 Rmu_sc0003805.1_g000011 Rmu_sc0031199.1_g000003
rosa_roxburghii	Rroxscaffold_7G00164130 Rroxscaffold_7G00168220
rosa_rugosa	Rorug06G0293300 Rorug06G0327400
rosa_samantha	Rh6AG404900 Rh6AG441300 Rh6BG413300 Rh6BG461500 Rh6CG419300 Rh6CG453400 Rh6DG406000 Rh6DG440700
rosa_wichuraiana	Rw6G035430 Rw6G038240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	145
AatII	GACGTC	1 cut(s)	149
Acc65I	GGTACC	1 cut(s)	681
AccB1I	GGYRCC	1 cut(s)	681
AccB7I	CCANNNNNTGG	2 cut(s)	135, 352
AccI	GTMKAC	2 cut(s)	59, 1357
AccII	CGCG	2 cut(s)	51, 266
AclWI	GGATC	2 cut(s)	1469, 1487
AcuI	CTGAAG	1 cut(s)	1071
AcyI	GRCGYC	2 cut(s)	62, 146
AdeI	CACNNNGTG	1 cut(s)	441
AfaI	GTAC	5 cut(s)	434, 485, 683, 1112, 1436
AfiI	CCNNNNNNNGG	7 cut(s)	51, 52, 135, 195, 352, 423, 1091
AflIII	ACRYGT	1 cut(s)	264
AgsI	TTSAA	5 cut(s)	1177, 1229, 1444, 1546, 1555
AhlI	ACTAGT	1 cut(s)	1165
AjnI	CCWGG	3 cut(s)	134, 345, 351
AjuI	GAANNNNNNNTTGG	4 cut(s)	206, 238, 718, 750
Alw26I	GTCTC	2 cut(s)	11, 602
AlwI	GGATC	2 cut(s)	1469, 1487
AlwNI	CAGNNNCTG	2 cut(s)	352, 578
Ama87I	CYCGRG	3 cut(s)	14, 472, 938
AoxI	GGCC	4 cut(s)	11, 132, 235, 348
ApeKI	GCWGC	3 cut(s)	311, 427, 512
Asp700I	GAANNNNTTC	2 cut(s)	400, 1550
Asp718I	GGTACC	1 cut(s)	681
AspLEI	GCGC	1 cut(s)	1330
AspS9I	GGNCC	6 cut(s)	12, 93, 235, 349, 641, 799
AsuC2I	CCSGG	3 cut(s)	473, 474, 977
AsuHPI	GGTGA	3 cut(s)	235, 271, 1537
AvaI	CYCGRG	3 cut(s)	14, 472, 938
AvaII	GGWCC	3 cut(s)	93, 641, 799
BaeGI	GKGCMC	1 cut(s)	927
BanI	GGYRCC	1 cut(s)	681
BanII	GRGCYC	1 cut(s)	1371
BbvCI	CCTCAGC	1 cut(s)	170
BbvI	GCAGC	3 cut(s)	298, 439, 499
BccI	CCATC	4 cut(s)	88, 185, 284, 967
BceAI	ACGGC	4 cut(s)	91, 147, 310, 866
BcgI	CGANNNNNNTGC	2 cut(s)	732, 766
BciT130I	CCWGG	3 cut(s)	136, 347, 353
BciVI	GTATCC	1 cut(s)	212
BcnI	CCSGG	3 cut(s)	473, 474, 977
BcoDI	GTCTC	2 cut(s)	11, 602
BcuI	ACTAGT	1 cut(s)	1165
BfaI	CTAG	4 cut(s)	449, 686, 1166, 1361
BfoI	RGCGCY	1 cut(s)	1331
BfuI	GTATCC	1 cut(s)	212
BglI	GCCNNNNNGGC	1 cut(s)	180
BisI	GCNGC	5 cut(s)	312, 428, 513, 1246, 1559
BlsI	GCNGC	5 cut(s)	313, 429, 514, 1247, 1560
Bme1390I	CCNGG	6 cut(s)	136, 347, 353, 473, 474, 977
Bme18I	GGWCC	3 cut(s)	93, 641, 799
BmeT110I	CYCGRG	3 cut(s)	14, 472, 938
BmgT120I	GGNCC	6 cut(s)	12, 93, 235, 349, 641, 799
BmiI	GGNNCC	5 cut(s)	95, 167, 683, 800, 1003
BmrFI	CCNGG	6 cut(s)	136, 347, 353, 473, 474, 977
BplI	GAGNNNNNCTC	4 cut(s)	82, 114, 1083, 1115
BpmI	CTGGAG	2 cut(s)	406, 1327
Bpu10I	CCTNAGC	1 cut(s)	170
BpuEI	CTTGAG	1 cut(s)	1204
BpuMI	CCSGG	3 cut(s)	473, 474, 977
Bsa29I	ATCGAT	1 cut(s)	32
BsaHI	GRCGYC	2 cut(s)	62, 146
BsaI	GGTCTC	1 cut(s)	602
BsaJI	CCNNGG	6 cut(s)	111, 129, 161, 351, 472, 1005
BsaWI	WCCGGW	1 cut(s)	1378
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 137, 993, 1023
Bsc4I	CCNNNNNNNGG	7 cut(s)	51, 52, 135, 195, 352, 423, 1091
Bse118I	RCCGGY	3 cut(s)	332, 1232, 1352
Bse1I	ACTGG	3 cut(s)	1211, 1344, 1451
Bse3DI	GCAATG	2 cut(s)	1023, 1158
BseBI	CCWGG	3 cut(s)	136, 347, 353
BseCI	ATCGAT	1 cut(s)	32
BseDI	CCNNGG	6 cut(s)	111, 129, 161, 351, 472, 1005
BseGI	GGATG	1 cut(s)	10
BseLI	CCNNNNNNNGG	7 cut(s)	51, 52, 135, 195, 352, 423, 1091
BseMI	GCAATG	2 cut(s)	1023, 1158
BseMII	CTCAG	2 cut(s)	184, 731
BseNI	ACTGG	3 cut(s)	1211, 1344, 1451
BseRI	GAGGAG	1 cut(s)	242
BseSI	GKGCMC	1 cut(s)	927
BseXI	GCAGC	3 cut(s)	298, 439, 499
BseYI	CCCAGC	1 cut(s)	390
Bsh1236I	CGCG	2 cut(s)	51, 266
Bsh1285I	CGRYCG	1 cut(s)	1506
BshFI	GGCC	4 cut(s)	13, 134, 237, 350
BshNI	GGYRCC	1 cut(s)	681
BshVI	ATCGAT	1 cut(s)	32
BsiEI	CGRYCG	1 cut(s)	1506
BsiHKCI	CYCGRG	3 cut(s)	14, 472, 938
BsiSI	CCGG	8 cut(s)	38, 65, 333, 473, 977, 1233, 1353, 1379
BslFI	GGGAC	2 cut(s)	79, 455
BslI	CCNNNNNNNGG	7 cut(s)	51, 52, 135, 195, 352, 423, 1091
BsmAI	GTCTC	2 cut(s)	11, 602
BsmBI	CGTCTC	1 cut(s)	11
BsmFI	GGGAC	2 cut(s)	79, 455
BsmI	GAATGC	1 cut(s)	895
BsnI	GGCC	4 cut(s)	13, 134, 237, 350
Bso31I	GGTCTC	1 cut(s)	602
BsoBI	CYCGRG	3 cut(s)	14, 472, 938
Bsp1286I	GDGCHC	2 cut(s)	927, 1371
Bsp1407I	TGTACA	1 cut(s)	432
Bsp143I	GATC	3 cut(s)	1461, 1479, 1503
BspANI	GGCC	4 cut(s)	13, 134, 237, 350
BspCNI	CTCAG	2 cut(s)	183, 730
BspDI	ATCGAT	1 cut(s)	32
BspFNI	CGCG	2 cut(s)	51, 266
BspLI	GGNNCC	5 cut(s)	95, 167, 683, 800, 1003
BspPI	GGATC	2 cut(s)	1469, 1487
BspT107I	GGYRCC	1 cut(s)	681
BspTNI	GGTCTC	1 cut(s)	602
BsrDI	GCAATG	2 cut(s)	1023, 1158
BsrFI	RCCGGY	3 cut(s)	332, 1232, 1352
BsrGI	TGTACA	1 cut(s)	432
BsrI	ACTGG	3 cut(s)	1211, 1344, 1451
BssAI	RCCGGY	3 cut(s)	332, 1232, 1352
BssECI	CCNNGG	6 cut(s)	111, 129, 161, 351, 472, 1005
BssMI	GATC	3 cut(s)	1461, 1479, 1503
BssNI	GRCGYC	2 cut(s)	62, 146
BssT1I	CCWWGG	2 cut(s)	111, 1005
Bst2UI	CCWGG	3 cut(s)	136, 347, 353
Bst4CI	ACNGT	3 cut(s)	559, 673, 1223
Bst6I	CTCTTC	1 cut(s)	554
BstACI	GRCGYC	2 cut(s)	62, 146
BstAPI	GCANNNNNTGC	2 cut(s)	512, 578
BstAUI	TGTACA	1 cut(s)	432
BstC8I	GCNNGC	4 cut(s)	185, 334, 504, 543
BstDEI	CTNAG	2 cut(s)	170, 717
BstDSI	CCRYGG	1 cut(s)	129
BstENI	CCTNNNNNAGG	1 cut(s)	1089
BstF5I	GGATG	1 cut(s)	10
BstFNI	CGCG	2 cut(s)	51, 266
BstH2I	RGCGCY	1 cut(s)	1331
BstHHI	GCGC	1 cut(s)	1330
BstKTI	GATC	3 cut(s)	1464, 1482, 1506
BstMAI	GTCTC	2 cut(s)	11, 602
BstMBI	GATC	3 cut(s)	1461, 1479, 1503
BstMCI	CGRYCG	1 cut(s)	1506
BstMWI	GCNNNNNNNGC	9 cut(s)	180, 193, 256, 308, 512, 578, 770, 1010, 1254
BstNI	CCWGG	3 cut(s)	136, 347, 353
BstSCI	CCNGG	6 cut(s)	134, 345, 351, 471, 472, 975
BstSLI	GKGCMC	1 cut(s)	927
BstUI	CGCG	2 cut(s)	51, 266
BstV1I	GCAGC	3 cut(s)	298, 439, 499
BstX2I	RGATCY	1 cut(s)	1461
BstYI	RGATCY	1 cut(s)	1461
Bsu15I	ATCGAT	1 cut(s)	32
BsuI	GTATCC	1 cut(s)	212
BsuRI	GGCC	4 cut(s)	13, 134, 237, 350
BsuTUI	ATCGAT	1 cut(s)	32
BtgI	CCRYGG	1 cut(s)	129
BtsCI	GGATG	1 cut(s)	10
BtsIMutI	CAGTG	1 cut(s)	555
Cac8I	GCNNGC	4 cut(s)	185, 334, 504, 543
CaiI	CAGNNNCTG	2 cut(s)	352, 578
CfoI	GCGC	1 cut(s)	1330
Cfr10I	RCCGGY	3 cut(s)	332, 1232, 1352
Cfr13I	GGNCC	6 cut(s)	12, 93, 235, 349, 641, 799
Cfr9I	CCCGGG	1 cut(s)	472
ClaI	ATCGAT	1 cut(s)	32
CseI	GACGC	2 cut(s)	70, 272
Csp6I	GTAC	5 cut(s)	433, 484, 682, 1111, 1435
CviAII	CATG	9 cut(s)	190, 211, 613, 983, 1030, 1127, 1207, 1405, 1522
CviQI	GTAC	5 cut(s)	433, 484, 682, 1111, 1435
DdeI	CTNAG	2 cut(s)	170, 717
DpnI	GATC	3 cut(s)	1463, 1481, 1505
DpnII	GATC	3 cut(s)	1461, 1479, 1503
DraIII	CACNNNGTG	1 cut(s)	441
DrdI	GACNNNNNNGTC	1 cut(s)	145
DseDI	GACNNNNNNGTC	1 cut(s)	145
Eam1104I	CTCTTC	1 cut(s)	554
EarI	CTCTTC	1 cut(s)	554
Eco130I	CCWWGG	2 cut(s)	111, 1005
Eco24I	GRGCYC	1 cut(s)	1371
Eco31I	GGTCTC	1 cut(s)	602
Eco32I	GATATC	1 cut(s)	30
Eco47I	GGWCC	3 cut(s)	93, 641, 799
Eco57I	CTGAAG	1 cut(s)	1071
Eco88I	CYCGRG	3 cut(s)	14, 472, 938
EcoNI	CCTNNNNNAGG	1 cut(s)	1089
EcoO109I	RGGNCCY	3 cut(s)	93, 349, 799
EcoRII	CCWGG	3 cut(s)	134, 345, 351
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	2 cut(s)	111, 1005
EcoT38I	GRGCYC	1 cut(s)	1371
ErhI	CCWWGG	2 cut(s)	111, 1005
Esp3I	CGTCTC	1 cut(s)	11
FaeI	CATG	9 cut(s)	193, 214, 616, 986, 1033, 1130, 1210, 1408, 1525
FalI	AAGNNNNNCTT	4 cut(s)	206, 238, 1424, 1456
FaqI	GGGAC	2 cut(s)	79, 455
FatI	CATG	9 cut(s)	189, 210, 612, 982, 1029, 1126, 1206, 1404, 1521
FauI	CCCGC	4 cut(s)	44, 189, 264, 296
FblI	GTMKAC	2 cut(s)	59, 1357
Fnu4HI	GCNGC	5 cut(s)	312, 428, 513, 1246, 1559
FokI	GGATG	1 cut(s)	17
FriOI	GRGCYC	1 cut(s)	1371
Fsp4HI	GCNGC	5 cut(s)	312, 428, 513, 1246, 1559
FspBI	CTAG	4 cut(s)	449, 686, 1166, 1361
GlaI	GCGC	1 cut(s)	1329
GluI	GCNGC	5 cut(s)	312, 428, 513, 1246, 1559
GsaI	CCCAGC	1 cut(s)	394
GsuI	CTGGAG	2 cut(s)	406, 1327
HaeII	RGCGCY	1 cut(s)	1331
HaeIII	GGCC	4 cut(s)	13, 134, 237, 350
HapII	CCGG	8 cut(s)	38, 65, 333, 473, 977, 1233, 1353, 1379
HgaI	GACGC	2 cut(s)	70, 272
HhaI	GCGC	1 cut(s)	1330
Hin1I	GRCGYC	2 cut(s)	62, 146
Hin1II	CATG	9 cut(s)	193, 214, 616, 986, 1033, 1130, 1210, 1408, 1525
Hin6I	GCGC	1 cut(s)	1328
HinP1I	GCGC	1 cut(s)	1328
HincII	GTYRAC	2 cut(s)	60, 208
HindII	GTYRAC	2 cut(s)	60, 208
HpaII	CCGG	8 cut(s)	38, 65, 333, 473, 977, 1233, 1353, 1379
HphI	GGTGA	3 cut(s)	235, 271, 1537
Hpy166II	GTNNAC	8 cut(s)	60, 129, 208, 435, 641, 693, 1358, 1528
Hpy188I	TCNGA	4 cut(s)	90, 144, 1289, 1508
Hpy188III	TCNNGA	7 cut(s)	461, 628, 886, 938, 940, 1089, 1195
Hpy8I	GTNNAC	8 cut(s)	60, 129, 208, 435, 641, 693, 1358, 1528
Hpy99I	CGWCG	5 cut(s)	64, 148, 151, 368, 658
HpyAV	CCTTC	4 cut(s)	208, 379, 1095, 1345
HpyCH4III	ACNGT	3 cut(s)	559, 673, 1223
HpyCH4IV	ACGT	1 cut(s)	146
HpyCH4V	TGCA	6 cut(s)	506, 515, 581, 743, 1049, 1151
HpyF10VI	GCNNNNNNNGC	9 cut(s)	180, 193, 256, 308, 512, 578, 770, 1010, 1254
HpyF3I	CTNAG	2 cut(s)	170, 717
HpySE526I	ACGT	1 cut(s)	146
Hsp92I	GRCGYC	2 cut(s)	62, 146
Hsp92II	CATG	9 cut(s)	193, 214, 616, 986, 1033, 1130, 1210, 1408, 1525
HspAI	GCGC	1 cut(s)	1328
KpnI	GGTACC	1 cut(s)	685
KroI	GCCGGC	1 cut(s)	332
KroNI	GCCGGC	1 cut(s)	334
Kzo9I	GATC	3 cut(s)	1461, 1479, 1503
LmnI	GCTCC	7 cut(s)	22, 387, 499, 726, 1001, 1335, 1518
Lsp1109I	GCAGC	3 cut(s)	298, 439, 499
MaeI	CTAG	4 cut(s)	449, 686, 1166, 1361
MaeII	ACGT	1 cut(s)	146
MaeIII	GTNAC	3 cut(s)	766, 1235, 1381
MalI	GATC	3 cut(s)	1463, 1481, 1505
MboI	GATC	3 cut(s)	1461, 1479, 1503
MboII	GAAGA	4 cut(s)	541, 1012, 1306, 1543
MfeI	CAATTG	2 cut(s)	1050, 1177
MflI	RGATCY	1 cut(s)	1461
MhlI	GDGCHC	2 cut(s)	927, 1371
MluCI	AATT	8 cut(s)	591, 733, 831, 928, 1050, 1177, 1266, 1541
MluI	ACGCGT	1 cut(s)	264
MlyI	GAGTC	2 cut(s)	133, 1137
MmeI	TCCRAC	1 cut(s)	167
MroNI	GCCGGC	1 cut(s)	332
MroXI	GAANNNNTTC	2 cut(s)	400, 1550
MseI	TTAA	5 cut(s)	407, 590, 969, 1419, 1539
MslI	CAYNNNNRTG	4 cut(s)	188, 1028, 1125, 1322
MspA1I	CMGCKG	2 cut(s)	430, 1533
MspI	CCGG	8 cut(s)	38, 65, 333, 473, 977, 1233, 1353, 1379
MspR9I	CCNGG	6 cut(s)	136, 347, 353, 473, 474, 977
MunI	CAATTG	2 cut(s)	1050, 1177
Mva1269I	GAATGC	1 cut(s)	895
MvaI	CCWGG	3 cut(s)	136, 347, 353
MvnI	CGCG	2 cut(s)	51, 266
MwoI	GCNNNNNNNGC	9 cut(s)	180, 193, 256, 308, 512, 578, 770, 1010, 1254
NaeI	GCCGGC	1 cut(s)	334
NciI	CCSGG	3 cut(s)	473, 474, 977
NdeII	GATC	3 cut(s)	1461, 1479, 1503
NgoMIV	GCCGGC	1 cut(s)	332
NlaIII	CATG	9 cut(s)	193, 214, 616, 986, 1033, 1130, 1210, 1408, 1525
NlaIV	GGNNCC	5 cut(s)	95, 167, 683, 800, 1003
NmeAIII	GCCGAG	2 cut(s)	186, 360
NmuCI	GTSAC	2 cut(s)	766, 1381
PaeR7I	CTCGAG	1 cut(s)	938
PcsI	WCGNNNNNNNCGW	1 cut(s)	38
PctI	GAATGC	1 cut(s)	895
PdiI	GCCGGC	1 cut(s)	334
PdmI	GAANNNNTTC	2 cut(s)	400, 1550
PfeI	GAWTC	8 cut(s)	34, 284, 445, 658, 943, 1096, 1116, 1302
PflMI	CCANNNNNTGG	2 cut(s)	135, 352
PkrI	GCNGC	5 cut(s)	313, 429, 514, 1247, 1560
Ple19I	CGATCG	1 cut(s)	1506
PleI	GAGTC	2 cut(s)	133, 1137
PpsI	GAGTC	2 cut(s)	133, 1137
PpuMI	RGGWCCY	2 cut(s)	93, 799
Psp5II	RGGWCCY	2 cut(s)	93, 799
Psp6I	CCWGG	3 cut(s)	134, 345, 351
PspFI	CCCAGC	1 cut(s)	390
PspGI	CCWGG	3 cut(s)	134, 345, 351
PspN4I	GGNNCC	5 cut(s)	95, 167, 683, 800, 1003
PspPI	GGNCC	6 cut(s)	12, 93, 235, 349, 641, 799
PspPPI	RGGWCCY	2 cut(s)	93, 799
PsrI	GAACNNNNNNTAC	2 cut(s)	674, 706
PstNI	CAGNNNCTG	2 cut(s)	352, 578
PsuI	RGATCY	1 cut(s)	1461
PvuI	CGATCG	1 cut(s)	1506
PvuII	CAGCTG	1 cut(s)	430
RsaI	GTAC	5 cut(s)	434, 485, 683, 1112, 1436
RsaNI	GTAC	5 cut(s)	433, 484, 682, 1111, 1435
RseI	CAYNNNNRTG	4 cut(s)	188, 1028, 1125, 1322
SalI	GTCGAC	1 cut(s)	58
SaqAI	TTAA	5 cut(s)	407, 590, 969, 1419, 1539
SatI	GCNGC	5 cut(s)	312, 428, 513, 1246, 1559
Sau3AI	GATC	3 cut(s)	1461, 1479, 1503
Sau96I	GGNCC	6 cut(s)	12, 93, 235, 349, 641, 799
SchI	GAGTC	2 cut(s)	133, 1137
ScrFI	CCNGG	6 cut(s)	136, 347, 353, 473, 474, 977
SduI	GDGCHC	2 cut(s)	927, 1371
Sfr274I	CTCGAG	1 cut(s)	938
SinI	GGWCC	3 cut(s)	93, 641, 799
SlaI	CTCGAG	1 cut(s)	938
SmaI	CCCGGG	1 cut(s)	474
SmiMI	CAYNNNNRTG	4 cut(s)	188, 1028, 1125, 1322
SmlI	CTYRAG	2 cut(s)	938, 1183
SmoI	CTYRAG	2 cut(s)	938, 1183
SpeI	ACTAGT	1 cut(s)	1165
Sse9I	AATT	8 cut(s)	591, 733, 831, 928, 1050, 1177, 1266, 1541
SspMI	CTAG	4 cut(s)	449, 686, 1166, 1361
StyD4I	CCNGG	6 cut(s)	134, 345, 351, 471, 472, 975
StyI	CCWWGG	2 cut(s)	111, 1005
TaaI	ACNGT	3 cut(s)	559, 673, 1223
TaiI	ACGT	1 cut(s)	149
TaqI	TCGA	8 cut(s)	32, 59, 656, 737, 939, 962, 1218, 1502
TasI	AATT	8 cut(s)	591, 733, 831, 928, 1050, 1177, 1266, 1541
TatI	WGTACW	2 cut(s)	432, 1434
TauI	GCSGC	2 cut(s)	1248, 1561
TfiI	GAWTC	8 cut(s)	34, 284, 445, 658, 943, 1096, 1116, 1302
Tru1I	TTAA	5 cut(s)	407, 590, 969, 1419, 1539
Tru9I	TTAA	5 cut(s)	407, 590, 969, 1419, 1539
TscAI	CASTG	1 cut(s)	562
TseFI	GTSAC	2 cut(s)	766, 1381
TseI	GCWGC	3 cut(s)	311, 427, 512
Tsp45I	GTSAC	2 cut(s)	766, 1381
TspGWI	ACGGA	2 cut(s)	35, 1128
TspMI	CCCGGG	1 cut(s)	472
TspRI	CASTG	1 cut(s)	562
Van91I	CCANNNNNTGG	2 cut(s)	135, 352
VpaK11BI	GGWCC	3 cut(s)	93, 641, 799
XagI	CCTNNNNNAGG	1 cut(s)	1089
XcmI	CCANNNNNNNNNTGG	1 cut(s)	635
XhoI	CTCGAG	1 cut(s)	938
XmaI	CCCGGG	1 cut(s)	472
XmiI	GTMKAC	2 cut(s)	59, 1357
XmnI	GAANNNNTTC	2 cut(s)	400, 1550
XspI	CTAG	4 cut(s)	449, 686, 1166, 1361
ZraI	GACGTC	1 cut(s)	147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.