MD09G1017200.v1.1

Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
1070095 .. 1074473
4379 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1017200.v1.1.491

Sequence Viewer

Length: 1563 bp
ATGGGATCGGGATCGGGATCGGGATCATGGCACATGGAGAAAAGAAACAGCTTCCGAGTCGAACCCGTTAGAGACATTGATCATGTGCTCGAAAATGGGTCTCTCTCGATAATCGTGCTTGGCGCTTCTGGTGATCTTGCCAAGAAGAAGACTTTTCCGGCACTCTTCAACCTTTATAAGCAGGGATTTCTGCTACCTGAAGAGGTTCACATATTTGGATATGCAAGGACTAAGATTTCTGATGAAGAGCTAAGAAACCGCATACGTGGGTATCTTGTCCGTGACAAAGGAGCTTCACCCAAGGATGTGGAAGATGTAACCAATTTTTTGCAACTGATCAAATATGTAAGTGGTTCTTACGATGGTGTGGAAGGATTTCGCCTGCTTGATAAGGAAATTTCAGATAATGAAATCTCAAAGAATAGTGCGGAAGGATCTTCCCGCAGGCTCTTTTATCTTGCACTTCCTCCATCAGTATATCCCCCTGTCTGCAGGATGATCAGGCATTATTGCATGAATAGATCTGATCTTGGTGGATGGACTCGTATTGTTGTTGAGAAGCCTTTTGGCAAGGATTTGGACTCTGCAGAACAATTGAGTAATCAGATTGGGGAGTTGTTCGAGGAACCACAAATTTACCGTATCGATCACTATTTGGGGAAGGAATTGGTGCAGAATCTGTTAGTACTTCGTTTTGCAAATCGATTCTTTTTGCCCCTTTGGAACCGAGACAACATTGCGAATGTACAGATTGTGTTTAGGGAGGATTTTGGAACTGAAGGTCGTGGTGGATATTTTGATGAATATGGAATTATCCGCGATATTATTCAGAATCATCTCTTGCAGGTTCTATGCTTGGTTGCCATGGAAAAACCTATTTCCCTAAAACCTGAGCATATACGGGACGAGAAAGTAAAGGTTCTTCAATCAGTAATGCCAATTGAGGATGATGAAGTTGTTCTTGGACAATATGATGGCTACACAGACGATCCAACTGTTCCTGACCACTCAAACACTCCAACCTTTTCAACTGTGATTCTGCGAATCCACAATGAAAGATGGGAAGGCGTTCCTTTTATACTAAAGGCTGGAAAAGCATTAAATTCAAGAAAGGCAGAAATAAGAGTTCAATTTAAGGATGTTCCTGGTGACATATTCAAATGTAAGAGGCAAGGGAGGAATGAGTTTGTAATACGCTTGCAGCCTTCAGAAGCCATGTACATGAAACTTACGGTCAAGCAGCCTGGACTCGAGATGTCAACCGTCCAAAGTGAATTAGACTTGTCGTATGGGCAACGTTATCAAGGGGTAACTATCCCGGAGGCTTATGAACGTCTAATTCTTGACACAATTAGAGGCGATCAACAACATTTTGTGCGAAGAGATGAGTTGAAGGCGGCATGGGAAATCTTCACACCGCTTCTGCACAGAATTGACAACGGTGAGTTAAAGCCGCTTCCATACCAACCGGGCAGTCGGGGTCCTGCAGAAGCGGATGCACTGCTGGAAAAAGCTGGATACGTACAAACACATGGCTACATATGGATCCCTCCTACCTTGTAG

Protein Analysis

521

Amino Acids

59.47

Weight (kDa)

6.02

Isoelectric Point (pI)

46.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G6PD_N PF00479 38 - 226 7.1e-59 Glucose-6-phosphate dehydrogenase, NAD binding domain
G6PD_C PF02781 228 - 507 6.9e-111 Glucose-6-phosphate dehydrogenase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 835
AccII CGCG 1 cut(s) 819
AciI CCGC 8 cut(s) 259, 428, 442, 817, 1397, 1418, 1454, 1493
AclI AACGTT 1 cut(s) 1297
AclWI GGATC 8 cut(s) 13, 19, 25, 31, 442, 983, 1540, 1553
AcsI RAATTY 3 cut(s) 396, 633, 1102
AcuI CTGAAG 3 cut(s) 219, 798, 1191
AfaI GTAC 4 cut(s) 687, 747, 1220, 1524
AgsI TTSAA 7 cut(s) 169, 926, 1029, 1107, 1130, 1159, 1393
AjnI CCWGG 2 cut(s) 1144, 1243
AjuI GAANNNNNNNTTGG 2 cut(s) 945, 977
AluBI AGCT 4 cut(s) 51, 250, 293, 1514
AluI AGCT 4 cut(s) 51, 250, 293, 1514
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 3 cut(s) 66, 105, 723
AlwI GGATC 8 cut(s) 13, 19, 25, 31, 442, 983, 1540, 1553
AlwNI CAGNNNCTG 1 cut(s) 679
Ama87I CYCGRG 1 cut(s) 1250
ApeKI GCWGC 2 cut(s) 1201, 1240
ApoI RAATTY 3 cut(s) 396, 633, 1102
Asp700I GAANNNNTTC 4 cut(s) 204, 375, 957, 1068
AspLEI GCGC 1 cut(s) 125
AspS9I GGNCC 1 cut(s) 1481
AsuC2I CCSGG 2 cut(s) 1319, 1470
AsuHPI GGTGA 4 cut(s) 143, 288, 1160, 1454
AvaI CYCGRG 1 cut(s) 1250
AvaII GGWCC 1 cut(s) 1481
BaeI ACNNNNGTAYC 2 cut(s) 254, 287
BamHI GGATCC 1 cut(s) 1545
BarI GAAGNNNNNNTAC 2 cut(s) 906, 938
BbsI GAAGAC 1 cut(s) 155
Bbv12I GWGCWC 1 cut(s) 90
BbvI GCAGC 2 cut(s) 1213, 1252
BccI CCATC 5 cut(s) 356, 478, 531, 968, 1053
BcgI CGANNNNNNTGC 2 cut(s) 97, 131
BciT130I CCWGG 2 cut(s) 1146, 1245
BciVI GTATCC 1 cut(s) 1511
BclI TGATCA 3 cut(s) 79, 336, 498
BcnI CCSGG 2 cut(s) 1319, 1470
BcoDI GTCTC 3 cut(s) 66, 105, 723
BfmI CTRYAG 3 cut(s) 490, 585, 1485
BfoI RGCGCY 1 cut(s) 126
BfuAI ACCTGC 1 cut(s) 835
BfuI GTATCC 1 cut(s) 1511
BglII AGATCT 1 cut(s) 521
BisI GCNGC 4 cut(s) 1202, 1241, 1398, 1454
BlsI GCNGC 4 cut(s) 1203, 1242, 1399, 1455
BmcAI AGTACT 1 cut(s) 687
Bme1390I CCNGG 4 cut(s) 1146, 1245, 1319, 1470
Bme18I GGWCC 1 cut(s) 1481
BmeT110I CYCGRG 1 cut(s) 1250
BmgT120I GGNCC 1 cut(s) 1481
BmiI GGNNCC 4 cut(s) 627, 725, 1482, 1547
BmrFI CCNGG 4 cut(s) 1146, 1245, 1319, 1470
BmsI GCATC 1 cut(s) 1486
BpiI GAAGAC 1 cut(s) 155
Bpu10I CCTNAGC 1 cut(s) 891
BpuMI CCSGG 2 cut(s) 1319, 1470
Bsa29I ATCGAT 2 cut(s) 645, 703
BsaAI YACGTR 2 cut(s) 266, 1522
BsaBI GATNNNNATC 3 cut(s) 10, 16, 22
BsaI GGTCTC 1 cut(s) 105
BsaJI CCNNGG 2 cut(s) 300, 864
Bse3DI GCAATG 1 cut(s) 735
Bse8I GATNNNNATC 3 cut(s) 10, 16, 22
BseBI CCWGG 2 cut(s) 1146, 1245
BseCI ATCGAT 2 cut(s) 645, 703
BseDI CCNNGG 2 cut(s) 300, 864
BseGI GGATG 6 cut(s) 310, 501, 542, 952, 1144, 1501
BseJI GATNNNNATC 3 cut(s) 10, 16, 22
BseMI GCAATG 1 cut(s) 735
BseMII CTCAG 1 cut(s) 882
BseXI GCAGC 2 cut(s) 1213, 1252
BsgI GTGCAG 2 cut(s) 692, 1409
Bsh1236I CGCG 1 cut(s) 819
BshVI ATCGAT 2 cut(s) 645, 703
BsiHKAI GWGCWC 1 cut(s) 90
BsiHKCI CYCGRG 1 cut(s) 1250
BsiSI CCGG 3 cut(s) 158, 1319, 1469
BslFI GGGAC 1 cut(s) 917
BsmAI GTCTC 3 cut(s) 66, 105, 723
BsmFI GGGAC 1 cut(s) 917
Bso31I GGTCTC 1 cut(s) 105
BsoBI CYCGRG 1 cut(s) 1250
Bsp1286I GDGCHC 1 cut(s) 90
Bsp1407I TGTACA 2 cut(s) 745, 1218
Bsp19I CCATGG 1 cut(s) 864
BspACI CCGC 8 cut(s) 259, 428, 442, 817, 1397, 1418, 1454, 1493
BspCNI CTCAG 1 cut(s) 883
BspDI ATCGAT 2 cut(s) 645, 703
BspFNI CGCG 1 cut(s) 819
BspLI GGNNCC 4 cut(s) 627, 725, 1482, 1547
BspMAI CTGCAG 3 cut(s) 494, 589, 1489
BspMI ACCTGC 1 cut(s) 835
BspPI GGATC 8 cut(s) 13, 19, 25, 31, 442, 983, 1540, 1553
BspQI GCTCTTC 1 cut(s) 240
BspTNI GGTCTC 1 cut(s) 105
BsrDI GCAATG 1 cut(s) 735
BsrGI TGTACA 2 cut(s) 745, 1218
BssECI CCNNGG 2 cut(s) 300, 864
BssT1I CCWWGG 2 cut(s) 300, 864
Bst2UI CCWGG 2 cut(s) 1146, 1245
Bst4CI ACNGT 6 cut(s) 641, 997, 1033, 1234, 1264, 1442
Bst6I CTCTTC 4 cut(s) 170, 195, 240, 1375
BstAUI TGTACA 2 cut(s) 745, 1218
BstBAI YACGTR 2 cut(s) 266, 1522
BstC8I GCNNGC 3 cut(s) 383, 446, 1199
BstDEI CTNAG 3 cut(s) 231, 251, 891
BstDSI CCRYGG 1 cut(s) 864
BstF5I GGATG 6 cut(s) 310, 501, 542, 952, 1144, 1501
BstFNI CGCG 1 cut(s) 819
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 1 cut(s) 125
BstMAI GTCTC 3 cut(s) 66, 105, 723
BstMWI GCNNNNNNNGC 1 cut(s) 1094
BstNI CCWGG 2 cut(s) 1146, 1245
BstSCI CCNGG 4 cut(s) 1144, 1243, 1317, 1468
BstSFI CTRYAG 3 cut(s) 490, 585, 1485
BstSNI TACGTA 1 cut(s) 1522
BstUI CGCG 1 cut(s) 819
BstV1I GCAGC 2 cut(s) 1213, 1252
BstV2I GAAGAC 1 cut(s) 155
BstX2I RGATCY 3 cut(s) 434, 521, 1545
BstXI CCANNNNNNTGG 1 cut(s) 307
BstYI RGATCY 3 cut(s) 434, 521, 1545
Bsu15I ATCGAT 2 cut(s) 645, 703
BsuI GTATCC 1 cut(s) 1511
BsuTUI ATCGAT 2 cut(s) 645, 703
BtgI CCRYGG 1 cut(s) 864
BtsCI GGATG 6 cut(s) 310, 501, 542, 952, 1144, 1501
BtsI GCAGTG 1 cut(s) 1499
BtsIMutI CAGTG 1 cut(s) 1499
BveI ACCTGC 1 cut(s) 835
Cac8I GCNNGC 3 cut(s) 383, 446, 1199
CaiI CAGNNNCTG 1 cut(s) 679
CfoI GCGC 1 cut(s) 125
Cfr13I GGNCC 1 cut(s) 1481
ClaI ATCGAT 2 cut(s) 645, 703
Csp6I GTAC 4 cut(s) 686, 746, 1219, 1523
CviAII CATG 9 cut(s) 27, 34, 83, 514, 865, 1216, 1222, 1401, 1532
CviQI GTAC 4 cut(s) 686, 746, 1219, 1523
DdeI CTNAG 3 cut(s) 231, 251, 891
Eam1104I CTCTTC 4 cut(s) 170, 195, 240, 1375
EarI CTCTTC 4 cut(s) 170, 195, 240, 1375
Eco105I TACGTA 1 cut(s) 1522
Eco130I CCWWGG 2 cut(s) 300, 864
Eco31I GGTCTC 1 cut(s) 105
Eco47I GGWCC 1 cut(s) 1481
Eco57I CTGAAG 3 cut(s) 219, 798, 1191
Eco88I CYCGRG 1 cut(s) 1250
EcoO109I RGGNCCY 1 cut(s) 1481
EcoRII CCWGG 2 cut(s) 1144, 1243
EcoT14I CCWWGG 2 cut(s) 300, 864
ErhI CCWWGG 2 cut(s) 300, 864
FaeI CATG 9 cut(s) 30, 37, 86, 517, 868, 1219, 1225, 1404, 1535
FalI AAGNNNNNCTT 4 cut(s) 340, 372, 945, 977
FaqI GGGAC 1 cut(s) 917
FatI CATG 9 cut(s) 26, 33, 82, 513, 864, 1215, 1221, 1400, 1531
FauI CCCGC 1 cut(s) 449
FauNDI CATATG 1 cut(s) 1541
FbaI TGATCA 3 cut(s) 79, 336, 498
Fnu4HI GCNGC 4 cut(s) 1202, 1241, 1398, 1454
FokI GGATG 6 cut(s) 317, 508, 549, 959, 1151, 1508
Fsp4HI GCNGC 4 cut(s) 1202, 1241, 1398, 1454
GlaI GCGC 1 cut(s) 124
GluI GCNGC 4 cut(s) 1202, 1241, 1398, 1454
HaeII RGCGCY 1 cut(s) 126
HapII CCGG 3 cut(s) 158, 1319, 1469
HhaI GCGC 1 cut(s) 125
Hin1II CATG 9 cut(s) 30, 37, 86, 517, 868, 1219, 1225, 1404, 1535
Hin6I GCGC 1 cut(s) 123
HinP1I GCGC 1 cut(s) 123
HincII GTYRAC 1 cut(s) 1260
HindII GTYRAC 1 cut(s) 1260
HinfI GANTC 9 cut(s) 57, 541, 581, 676, 705, 832, 1036, 1044, 1248
HpaII CCGG 3 cut(s) 158, 1319, 1469
HphI GGTGA 4 cut(s) 143, 288, 1160, 1454
Hpy166II GTNNAC 2 cut(s) 208, 1260
Hpy188I TCNGA 7 cut(s) 56, 241, 403, 526, 606, 831, 1210
Hpy188III TCNNGA 8 cut(s) 9, 15, 21, 106, 1001, 1107, 1252, 1343
Hpy8I GTNNAC 2 cut(s) 208, 1260
HpyAV CCTTC 7 cut(s) 365, 425, 655, 773, 1058, 1215, 1387
HpyCH4III ACNGT 6 cut(s) 641, 997, 1033, 1234, 1264, 1442
HpyCH4IV ACGT 4 cut(s) 265, 1297, 1333, 1521
HpyF10VI GCNNNNNNNGC 1 cut(s) 1094
HpyF3I CTNAG 3 cut(s) 231, 251, 891
HpySE526I ACGT 4 cut(s) 265, 1297, 1333, 1521
Hsp92II CATG 9 cut(s) 30, 37, 86, 517, 868, 1219, 1225, 1404, 1535
HspAI GCGC 1 cut(s) 123
Ksp22I TGATCA 3 cut(s) 79, 336, 498
LguI GCTCTTC 1 cut(s) 240
LmnI GCTCC 1 cut(s) 290
Lsp1109I GCAGC 2 cut(s) 1213, 1252
LweI GCATC 1 cut(s) 1486
MaeII ACGT 4 cut(s) 265, 1297, 1333, 1521
MaeIII GTNAC 4 cut(s) 281, 316, 1148, 1309
MfeI CAATTG 2 cut(s) 593, 939
MflI RGATCY 3 cut(s) 434, 521, 1545
MhlI GDGCHC 1 cut(s) 90
MlyI GAGTC 4 cut(s) 66, 535, 575, 1242
MmeI TCCRAC 2 cut(s) 1016, 1043
MroXI GAANNNNTTC 4 cut(s) 204, 375, 957, 1068
MseI TTAA 3 cut(s) 1100, 1134, 1448
MslI CAYNNNNRTG 1 cut(s) 1220
MspI CCGG 3 cut(s) 158, 1319, 1469
MspR9I CCNGG 4 cut(s) 1146, 1245, 1319, 1470
MunI CAATTG 2 cut(s) 593, 939
MvaI CCWGG 2 cut(s) 1146, 1245
MvnI CGCG 1 cut(s) 819
MwoI GCNNNNNNNGC 1 cut(s) 1094
NciI CCSGG 2 cut(s) 1319, 1470
NcoI CCATGG 1 cut(s) 864
NdeI CATATG 1 cut(s) 1541
NlaIII CATG 9 cut(s) 30, 37, 86, 517, 868, 1219, 1225, 1404, 1535
NlaIV GGNNCC 4 cut(s) 627, 725, 1482, 1547
NmuCI GTSAC 2 cut(s) 281, 1148
PaeR7I CTCGAG 1 cut(s) 1250
PciSI GCTCTTC 1 cut(s) 240
PdmI GAANNNNTTC 4 cut(s) 204, 375, 957, 1068
PfeI GAWTC 5 cut(s) 676, 705, 832, 1036, 1044
PfoI TCCNGGA 1 cut(s) 1317
PkrI GCNGC 4 cut(s) 1203, 1242, 1399, 1455
PleI GAGTC 4 cut(s) 65, 535, 575, 1242
PpsI GAGTC 4 cut(s) 65, 535, 575, 1242
Ppu21I YACGTR 2 cut(s) 266, 1522
PpuMI RGGWCCY 1 cut(s) 1481
PsiI TTATAA 1 cut(s) 177
Psp1406I AACGTT 1 cut(s) 1297
Psp5II RGGWCCY 1 cut(s) 1481
Psp6I CCWGG 2 cut(s) 1144, 1243
PspGI CCWGG 2 cut(s) 1144, 1243
PspN4I GGNNCC 4 cut(s) 627, 725, 1482, 1547
PspPI GGNCC 1 cut(s) 1481
PspPPI RGGWCCY 1 cut(s) 1481
PstI CTGCAG 3 cut(s) 494, 589, 1489
PstNI CAGNNNCTG 1 cut(s) 679
PsuI RGATCY 3 cut(s) 434, 521, 1545
RsaI GTAC 4 cut(s) 687, 747, 1220, 1524
RsaNI GTAC 4 cut(s) 686, 746, 1219, 1523
RseI CAYNNNNRTG 1 cut(s) 1220
SapI GCTCTTC 1 cut(s) 240
SaqAI TTAA 3 cut(s) 1100, 1134, 1448
SatI GCNGC 4 cut(s) 1202, 1241, 1398, 1454
Sau96I GGNCC 1 cut(s) 1481
ScaI AGTACT 1 cut(s) 687
SchI GAGTC 4 cut(s) 66, 535, 575, 1242
ScrFI CCNGG 4 cut(s) 1146, 1245, 1319, 1470
SduI GDGCHC 1 cut(s) 90
SfaNI GCATC 1 cut(s) 1486
SfcI CTRYAG 3 cut(s) 490, 585, 1485
Sfr274I CTCGAG 1 cut(s) 1250
SinI GGWCC 1 cut(s) 1481
SlaI CTCGAG 1 cut(s) 1250
SmiMI CAYNNNNRTG 1 cut(s) 1220
SmlI CTYRAG 1 cut(s) 1250
SmoI CTYRAG 1 cut(s) 1250
SnaBI TACGTA 1 cut(s) 1522
SsiI CCGC 8 cut(s) 259, 428, 442, 817, 1397, 1418, 1454, 1493
StyD4I CCNGG 4 cut(s) 1144, 1243, 1317, 1468
StyI CCWWGG 2 cut(s) 300, 864
TaaI ACNGT 6 cut(s) 641, 997, 1033, 1234, 1264, 1442
TaiI ACGT 4 cut(s) 268, 1300, 1336, 1524
TaqI TCGA 7 cut(s) 60, 90, 107, 621, 645, 703, 1251
TatI WGTACW 3 cut(s) 685, 745, 1218
TauI GCSGC 2 cut(s) 1400, 1456
TfiI GAWTC 5 cut(s) 676, 705, 832, 1036, 1044
Tru1I TTAA 3 cut(s) 1100, 1134, 1448
Tru9I TTAA 3 cut(s) 1100, 1134, 1448
TscAI CASTG 1 cut(s) 1506
TseFI GTSAC 2 cut(s) 281, 1148
TseI GCWGC 2 cut(s) 1201, 1240
Tsp45I GTSAC 2 cut(s) 281, 1148
TspDTI ATGAA 8 cut(s) 258, 423, 530, 816, 966, 1068, 1238, 1344
TspGWI ACGGA 1 cut(s) 269
TspRI CASTG 1 cut(s) 1506
VpaK11BI GGWCC 1 cut(s) 1481
XapI RAATTY 3 cut(s) 396, 633, 1102
XhoI CTCGAG 1 cut(s) 1250
XmnI GAANNNNTTC 4 cut(s) 204, 375, 957, 1068
ZrmI AGTACT 1 cut(s) 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.