Prupe.3G300200_v2.0.a1

Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
26531676 .. 26537007
5332 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G300200.1

Sequence Viewer

Length: 1551 bp
ATGGGATCGGGATCATGGCACATGGAGAAAAGAGAGAGTTTTAAAAATGAGCCGGTGAAAGATGTTGAGCATGTGCTTGAAAATGGGTCTCTCTCAATCATCGTGCTTGGCGCTTCTGGTGATCTTGCCAAGAAGAAGACTTTTCCAGCACTTTTCAACCTTTTTCAGCAGGGATTTCTGCAACCAAATGAAGTTCACATTTTTGGCTATGCAAGGACTAAGATTTCAGATGATGAGCTAAGAAACCGCATACGTGGATATCTTGTCCGGGACAAAGGAGCTTCACCAAAGGACTTGGAAGATGTAACCAAGTTTTTGCAACTGATCAAATATGTAAGTGGTTCTTACGACACTGAGGAGGGGTTTCGGCTGCTTGATAAAGAAATTTCAGAGACTGAAGTCTCAAGAAGTGGTGTGGGCGGATTATCCCGCAGGCTTTTTTATCTTGCACTTCCTCCATCAGTATATCCTTCTGTCTGCAGGATGATCAGGCATTGTTGCATGAATAAAACTGATCTTGGTGGATGGACTCGTATTGTTGTTGAGAAGCCTTTCGGCAAGGATTTGGAATCTGCAGAGCAACTCAGTACCCAGATTGGGGAGTTGTTTGAAGAATCACAAATTTACCGTATTGATCACTATTTGGGGAAGGAACTGGTGCAGAATCTGTTAGTACTTCGGTTTGCAAATCGATTTTTTTTGCCCCTCTGGAACCGAGACAACATTGAAAATGTACAGATTGTGTTTAGGGAGGATTTTGGAACTGAAGGTCGAGGTGGATATTTTGATGAATATGGAATTATCCGCGATATTATTCAAAATCATCTATTGCAGGTTCTTTGCTTAGTTGCCATGGAAAAGCCTATTTCCCTAAAACCTGAGCATATCAGGGATGAGAAAGTGAAGGTTCTTCAATCAGTACTACCAATTGAGGACGATGAAGTTGTTCTTGGACAATATGATGGCTATAGGGATGATCCAACTGTTCCTGACCACTCAAACACTCCAACTTTTTCAACCGTTGTTCTGCGGATCCACAATGAAAGATGGGAAGGTGTTCCTTTTATACTAAAGGCTGGGAAAGCATTAAATTCAAGAAAGGCGGAAATAAGAGTTCAATTTAAGGATGTGCCTGGTGACATATTCAAATGTAAGAAGCAAGGGAGAAATGAGTTTGTAATACGCTTGCAACCTTCAGAAGCCATGTACATGAAACTTACGGTCAAGCAGCCTGGACTGGAGATGTCTACTGTCCAAAGTGAATTAGACTTGTCATATGGGCAACGATATCAAGGGGTAACGATCCCGGAGGCTTATGAGCGTCTAATTCTTGATACAATAAGAGGAGATCAGCAACATTTTGTACGCAGAGATGAGTTGAAGGCGGCCTGGGAAATCTTCACGCCTCTTCTGCACAGAATTGACAATGGTGATTTAAAGCCGCTTCCATACAAACCAGGCAGTCGGGGTCCAGCAGAAGCCGATGCGCTGCTAGAAAAAGCCGGTTACGTACAAACACATGGCTACATCTGGATTCCTCCCACCTTGTAG

Protein Analysis

517

Amino Acids

59.11

Weight (kDa)

6.13

Isoelectric Point (pI)

44.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 823
AccI GTMKAC 1 cut(s) 1247
AccII CGCG 1 cut(s) 807
AciI CCGC 8 cut(s) 247, 420, 430, 805, 1030, 1103, 1385, 1442
AclWI GGATC 6 cut(s) 13, 19, 971, 1027, 1040, 1297
AcsI RAATTY 3 cut(s) 384, 621, 1090
AcuI CTGAAG 3 cut(s) 417, 786, 1179
AfaI GTAC 7 cut(s) 589, 675, 735, 921, 1208, 1365, 1512
AfiI CCNNNNNNNGG 2 cut(s) 597, 598
AjnI CCWGG 4 cut(s) 1132, 1231, 1388, 1456
AjuI GAANNNNNNNTTGG 2 cut(s) 933, 965
AluBI AGCT 2 cut(s) 238, 281
AluI AGCT 2 cut(s) 238, 281
Alw26I GTCTC 4 cut(s) 93, 386, 406, 711
AlwI GGATC 6 cut(s) 13, 19, 971, 1027, 1040, 1297
AlwNI CAGNNNCTG 2 cut(s) 395, 667
AoxI GGCC 1 cut(s) 1386
ApeKI GCWGC 3 cut(s) 370, 1228, 1489
ApoI RAATTY 3 cut(s) 384, 621, 1090
Asp700I GAANNNNTTC 3 cut(s) 551, 945, 1056
AspLEI GCGC 2 cut(s) 113, 1489
AspS9I GGNCC 1 cut(s) 1469
AsuC2I CCSGG 2 cut(s) 269, 1307
AsuHPI GGTGA 5 cut(s) 67, 131, 276, 1148, 1442
AvaII GGWCC 1 cut(s) 1469
BamHI GGATCC 1 cut(s) 1032
BbsI GAAGAC 1 cut(s) 143
BbvI GCAGC 3 cut(s) 357, 1240, 1476
BccI CCATC 4 cut(s) 466, 519, 956, 1041
BciT130I CCWGG 4 cut(s) 1134, 1233, 1390, 1458
BclI TGATCA 3 cut(s) 324, 486, 634
BcnI CCSGG 2 cut(s) 269, 1307
BcoDI GTCTC 4 cut(s) 93, 386, 406, 711
BfaI CTAG 1 cut(s) 1493
BfmI CTRYAG 3 cut(s) 478, 573, 967
BfoI RGCGCY 1 cut(s) 114
BfuAI ACCTGC 1 cut(s) 823
BisI GCNGC 5 cut(s) 371, 1229, 1386, 1442, 1490
BlsI GCNGC 5 cut(s) 372, 1230, 1387, 1443, 1491
BmcAI AGTACT 2 cut(s) 675, 921
Bme1390I CCNGG 6 cut(s) 269, 1134, 1233, 1307, 1390, 1458
Bme18I GGWCC 1 cut(s) 1469
BmgT120I GGNCC 1 cut(s) 1469
BmiI GGNNCC 3 cut(s) 713, 1034, 1470
BmrFI CCNGG 6 cut(s) 269, 1134, 1233, 1307, 1390, 1458
BmsI GCATC 1 cut(s) 1474
BoxI GACNNNNGTC 1 cut(s) 398
BpiI GAAGAC 1 cut(s) 143
BpmI CTGGAG 1 cut(s) 1259
Bpu10I CCTNAGC 1 cut(s) 879
BpuEI CTTGAG 1 cut(s) 388
BpuMI CCSGG 2 cut(s) 269, 1307
Bsa29I ATCGAT 1 cut(s) 691
BsaAI YACGTR 2 cut(s) 254, 1510
BsaBI GATNNNNATC 1 cut(s) 10
BsaI GGTCTC 1 cut(s) 93
BsaJI CCNNGG 2 cut(s) 852, 1389
Bsc4I CCNNNNNNNGG 2 cut(s) 597, 598
Bse118I RCCGGY 2 cut(s) 52, 1502
Bse1I ACTGG 2 cut(s) 660, 1242
Bse8I GATNNNNATC 1 cut(s) 10
BseBI CCWGG 4 cut(s) 1134, 1233, 1390, 1458
BseCI ATCGAT 1 cut(s) 691
BseDI CCNNGG 2 cut(s) 852, 1389
BseGI GGATG 5 cut(s) 489, 530, 898, 979, 1132
BseJI GATNNNNATC 1 cut(s) 10
BseLI CCNNNNNNNGG 2 cut(s) 597, 598
BseMII CTCAG 3 cut(s) 345, 598, 870
BseNI ACTGG 2 cut(s) 660, 1242
BseRI GAGGAG 2 cut(s) 371, 1359
BseXI GCAGC 3 cut(s) 357, 1240, 1476
BseYI CCCAGC 1 cut(s) 1076
BsgI GTGCAG 2 cut(s) 680, 1397
Bsh1236I CGCG 1 cut(s) 807
BshFI GGCC 1 cut(s) 1388
BshVI ATCGAT 1 cut(s) 691
BsiSI CCGG 4 cut(s) 53, 268, 1307, 1503
BslFI GGGAC 1 cut(s) 284
BslI CCNNNNNNNGG 2 cut(s) 597, 598
BsmAI GTCTC 4 cut(s) 93, 386, 406, 711
BsmFI GGGAC 1 cut(s) 284
BsnI GGCC 1 cut(s) 1388
Bso31I GGTCTC 1 cut(s) 93
Bsp1407I TGTACA 2 cut(s) 733, 1206
Bsp19I CCATGG 1 cut(s) 852
BspACI CCGC 8 cut(s) 247, 420, 430, 805, 1030, 1103, 1385, 1442
BspANI GGCC 1 cut(s) 1388
BspCNI CTCAG 3 cut(s) 346, 597, 871
BspDI ATCGAT 1 cut(s) 691
BspFNI CGCG 1 cut(s) 807
BspLI GGNNCC 3 cut(s) 713, 1034, 1470
BspMAI CTGCAG 2 cut(s) 482, 577
BspMI ACCTGC 1 cut(s) 823
BspPI GGATC 6 cut(s) 13, 19, 971, 1027, 1040, 1297
BspTNI GGTCTC 1 cut(s) 93
BsrFI RCCGGY 2 cut(s) 52, 1502
BsrGI TGTACA 2 cut(s) 733, 1206
BsrI ACTGG 2 cut(s) 660, 1242
BssAI RCCGGY 2 cut(s) 52, 1502
BssECI CCNNGG 2 cut(s) 852, 1389
BssT1I CCWWGG 1 cut(s) 852
Bst2UI CCWGG 4 cut(s) 1134, 1233, 1390, 1458
Bst4CI ACNGT 5 cut(s) 629, 985, 1021, 1222, 1252
Bst6I CTCTTC 1 cut(s) 1413
BstAUI TGTACA 2 cut(s) 733, 1206
BstBAI YACGTR 2 cut(s) 254, 1510
BstC8I GCNNGC 2 cut(s) 434, 1187
BstDEI CTNAG 6 cut(s) 219, 239, 354, 584, 844, 879
BstDSI CCRYGG 1 cut(s) 852
BstF5I GGATG 5 cut(s) 489, 530, 898, 979, 1132
BstFNI CGCG 1 cut(s) 807
BstH2I RGCGCY 1 cut(s) 114
BstHHI GCGC 2 cut(s) 113, 1489
BstMAI GTCTC 4 cut(s) 93, 386, 406, 711
BstMWI GCNNNNNNNGC 2 cut(s) 1082, 1411
BstNI CCWGG 4 cut(s) 1134, 1233, 1390, 1458
BstNSI RCATGY 1 cut(s) 74
BstPAI GACNNNNGTC 1 cut(s) 398
BstSCI CCNGG 6 cut(s) 267, 1132, 1231, 1305, 1388, 1456
BstSFI CTRYAG 3 cut(s) 478, 573, 967
BstSNI TACGTA 1 cut(s) 1510
BstUI CGCG 1 cut(s) 807
BstV1I GCAGC 3 cut(s) 357, 1240, 1476
BstV2I GAAGAC 1 cut(s) 143
BstX2I RGATCY 1 cut(s) 1032
BstYI RGATCY 1 cut(s) 1032
Bsu15I ATCGAT 1 cut(s) 691
BsuRI GGCC 1 cut(s) 1388
BsuTUI ATCGAT 1 cut(s) 691
BtgI CCRYGG 1 cut(s) 852
BtsCI GGATG 5 cut(s) 489, 530, 898, 979, 1132
BtsIMutI CAGTG 1 cut(s) 351
BveI ACCTGC 1 cut(s) 823
Cac8I GCNNGC 2 cut(s) 434, 1187
CaiI CAGNNNCTG 2 cut(s) 395, 667
CfoI GCGC 2 cut(s) 113, 1489
Cfr10I RCCGGY 2 cut(s) 52, 1502
Cfr13I GGNCC 1 cut(s) 1469
ClaI ATCGAT 1 cut(s) 691
CseI GACGC 1 cut(s) 1310
Csp6I GTAC 7 cut(s) 588, 674, 734, 920, 1207, 1364, 1511
CviAII CATG 8 cut(s) 15, 22, 71, 502, 853, 1204, 1210, 1520
CviQI GTAC 7 cut(s) 588, 674, 734, 920, 1207, 1364, 1511
DdeI CTNAG 6 cut(s) 219, 239, 354, 584, 844, 879
DraI TTTAAA 2 cut(s) 43, 1437
Eam1104I CTCTTC 1 cut(s) 1413
EarI CTCTTC 1 cut(s) 1413
EciI GGCGGA 2 cut(s) 435, 1118
Eco105I TACGTA 1 cut(s) 1510
Eco130I CCWWGG 1 cut(s) 852
Eco31I GGTCTC 1 cut(s) 93
Eco32I GATATC 2 cut(s) 260, 1289
Eco47I GGWCC 1 cut(s) 1469
Eco57I CTGAAG 3 cut(s) 417, 786, 1179
EcoRII CCWGG 4 cut(s) 1132, 1231, 1388, 1456
EcoRV GATATC 2 cut(s) 260, 1289
EcoT14I CCWWGG 1 cut(s) 852
ErhI CCWWGG 1 cut(s) 852
FaeI CATG 8 cut(s) 18, 25, 74, 505, 856, 1207, 1213, 1523
FalI AAGNNNNNCTT 4 cut(s) 328, 360, 933, 965
FaqI GGGAC 1 cut(s) 284
FatI CATG 8 cut(s) 14, 21, 70, 501, 852, 1203, 1209, 1519
FauI CCCGC 1 cut(s) 437
FauNDI CATATG 1 cut(s) 1276
FbaI TGATCA 3 cut(s) 324, 486, 634
FblI GTMKAC 1 cut(s) 1247
Fnu4HI GCNGC 5 cut(s) 371, 1229, 1386, 1442, 1490
FokI GGATG 5 cut(s) 496, 537, 905, 986, 1139
Fsp4HI GCNGC 5 cut(s) 371, 1229, 1386, 1442, 1490
FspBI CTAG 1 cut(s) 1493
GlaI GCGC 2 cut(s) 112, 1488
GluI GCNGC 5 cut(s) 371, 1229, 1386, 1442, 1490
GsaI CCCAGC 1 cut(s) 1080
GsuI CTGGAG 1 cut(s) 1259
HaeII RGCGCY 1 cut(s) 114
HaeIII GGCC 1 cut(s) 1388
HapII CCGG 4 cut(s) 53, 268, 1307, 1503
HgaI GACGC 1 cut(s) 1310
HhaI GCGC 2 cut(s) 113, 1489
Hin1II CATG 8 cut(s) 18, 25, 74, 505, 856, 1207, 1213, 1523
Hin6I GCGC 2 cut(s) 111, 1487
HinP1I GCGC 2 cut(s) 111, 1487
HinfI GANTC 5 cut(s) 529, 569, 614, 664, 1534
HpaII CCGG 4 cut(s) 53, 268, 1307, 1503
HphI GGTGA 5 cut(s) 67, 131, 276, 1148, 1442
Hpy166II GTNNAC 2 cut(s) 196, 1248
Hpy188I TCNGA 3 cut(s) 229, 391, 1198
Hpy188III TCNNGA 7 cut(s) 9, 405, 709, 989, 1095, 1331, 1531
Hpy8I GTNNAC 2 cut(s) 196, 1248
HpyAV CCTTC 7 cut(s) 480, 643, 761, 898, 1046, 1203, 1375
HpyCH4III ACNGT 5 cut(s) 629, 985, 1021, 1222, 1252
HpyCH4IV ACGT 2 cut(s) 253, 1509
HpyF10VI GCNNNNNNNGC 2 cut(s) 1082, 1411
HpyF3I CTNAG 6 cut(s) 219, 239, 354, 584, 844, 879
HpySE526I ACGT 2 cut(s) 253, 1509
Hsp92II CATG 8 cut(s) 18, 25, 74, 505, 856, 1207, 1213, 1523
HspAI GCGC 2 cut(s) 111, 1487
Ksp22I TGATCA 3 cut(s) 324, 486, 634
LmnI GCTCC 1 cut(s) 278
Lsp1109I GCAGC 3 cut(s) 357, 1240, 1476
LweI GCATC 1 cut(s) 1474
MaeI CTAG 1 cut(s) 1493
MaeII ACGT 2 cut(s) 253, 1509
MaeIII GTNAC 4 cut(s) 304, 1136, 1297, 1505
MboII GAAGA 7 cut(s) 145, 148, 311, 623, 902, 1390, 1400
MfeI CAATTG 1 cut(s) 927
MflI RGATCY 1 cut(s) 1032
MluCI AATT 9 cut(s) 384, 621, 798, 927, 1090, 1118, 1262, 1326, 1419
MlyI GAGTC 1 cut(s) 523
MmeI TCCRAC 2 cut(s) 1004, 1031
MroXI GAANNNNTTC 3 cut(s) 551, 945, 1056
MseI TTAA 4 cut(s) 42, 1088, 1122, 1436
MslI CAYNNNNRTG 1 cut(s) 1208
MspI CCGG 4 cut(s) 53, 268, 1307, 1503
MspR9I CCNGG 6 cut(s) 269, 1134, 1233, 1307, 1390, 1458
MunI CAATTG 1 cut(s) 927
MvaI CCWGG 4 cut(s) 1134, 1233, 1390, 1458
MvnI CGCG 1 cut(s) 807
MwoI GCNNNNNNNGC 2 cut(s) 1082, 1411
NciI CCSGG 2 cut(s) 269, 1307
NcoI CCATGG 1 cut(s) 852
NdeI CATATG 1 cut(s) 1276
NlaIII CATG 8 cut(s) 18, 25, 74, 505, 856, 1207, 1213, 1523
NlaIV GGNNCC 3 cut(s) 713, 1034, 1470
NmuCI GTSAC 1 cut(s) 1136
NspI RCATGY 1 cut(s) 74
PdmI GAANNNNTTC 3 cut(s) 551, 945, 1056
PfeI GAWTC 4 cut(s) 569, 614, 664, 1534
PfoI TCCNGGA 2 cut(s) 267, 1305
PkrI GCNGC 5 cut(s) 372, 1230, 1387, 1443, 1491
PleI GAGTC 1 cut(s) 523
PpsI GAGTC 1 cut(s) 523
Ppu21I YACGTR 2 cut(s) 254, 1510
PshAI GACNNNNGTC 1 cut(s) 398
Psp6I CCWGG 4 cut(s) 1132, 1231, 1388, 1456
PspFI CCCAGC 1 cut(s) 1076
PspGI CCWGG 4 cut(s) 1132, 1231, 1388, 1456
PspN4I GGNNCC 3 cut(s) 713, 1034, 1470
PspPI GGNCC 1 cut(s) 1469
PstI CTGCAG 2 cut(s) 482, 577
PstNI CAGNNNCTG 2 cut(s) 395, 667
PsuI RGATCY 1 cut(s) 1032
RsaI GTAC 7 cut(s) 589, 675, 735, 921, 1208, 1365, 1512
RsaNI GTAC 7 cut(s) 588, 674, 734, 920, 1207, 1364, 1511
RseI CAYNNNNRTG 1 cut(s) 1208
SaqAI TTAA 4 cut(s) 42, 1088, 1122, 1436
SatI GCNGC 5 cut(s) 371, 1229, 1386, 1442, 1490
Sau96I GGNCC 1 cut(s) 1469
ScaI AGTACT 2 cut(s) 675, 921
SchI GAGTC 1 cut(s) 523
ScrFI CCNGG 6 cut(s) 269, 1134, 1233, 1307, 1390, 1458
SfaNI GCATC 1 cut(s) 1474
SfcI CTRYAG 3 cut(s) 478, 573, 967
SinI GGWCC 1 cut(s) 1469
SmiMI CAYNNNNRTG 1 cut(s) 1208
SmlI CTYRAG 1 cut(s) 403
SmoI CTYRAG 1 cut(s) 403
SnaBI TACGTA 1 cut(s) 1510
Sse9I AATT 9 cut(s) 384, 621, 798, 927, 1090, 1118, 1262, 1326, 1419
SsiI CCGC 8 cut(s) 247, 420, 430, 805, 1030, 1103, 1385, 1442
SspMI CTAG 1 cut(s) 1493
StyD4I CCNGG 6 cut(s) 267, 1132, 1231, 1305, 1388, 1456
StyI CCWWGG 1 cut(s) 852
TaaI ACNGT 5 cut(s) 629, 985, 1021, 1222, 1252
TaiI ACGT 2 cut(s) 256, 1512
TaqI TCGA 2 cut(s) 691, 772
TasI AATT 9 cut(s) 384, 621, 798, 927, 1090, 1118, 1262, 1326, 1419
TatI WGTACW 4 cut(s) 673, 733, 919, 1206
TauI GCSGC 2 cut(s) 1388, 1444
TfiI GAWTC 4 cut(s) 569, 614, 664, 1534
Tru1I TTAA 4 cut(s) 42, 1088, 1122, 1436
Tru9I TTAA 4 cut(s) 42, 1088, 1122, 1436
TscAI CASTG 1 cut(s) 358
TseFI GTSAC 1 cut(s) 1136
TseI GCWGC 3 cut(s) 370, 1228, 1489
Tsp45I GTSAC 1 cut(s) 1136
TspDTI ATGAA 6 cut(s) 204, 518, 804, 954, 1056, 1226
TspRI CASTG 1 cut(s) 358
VpaK11BI GGWCC 1 cut(s) 1469
XapI RAATTY 3 cut(s) 384, 621, 1090
XceI RCATGY 1 cut(s) 74
XmiI GTMKAC 1 cut(s) 1247
XmnI GAANNNNTTC 3 cut(s) 551, 945, 1056
XspI CTAG 1 cut(s) 1493
ZrmI AGTACT 2 cut(s) 675, 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.