Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0004664

Physical Location & Seq

Genomic Coordinates Forward (+)

6255183 .. 6258912

Gene Structure 3730 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1087200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGAGGAGGAGAGAGCGAGAAAGAAACTACTGATACTCTACGCCACCCAAACCGGAAACGCTTTAGACGTCGCCGAGCGAGTGGGCCGCGAAGCCGAGCGCAGAGGCTGCCCCGTCCACCTTCTCTCCCTGGACCAATACGACGCCAGATGCCTAGCTCAAGAGGGCACTGTAATTTTTGTTGTTTCAACCACTGGCCAGGGAGATACTCCTGATCCCATGAAGGGGTTTTGGAAAGATCTTCTGCAGAAAAATCTGACTAGGCAATGGCTGGAGGGACTCCGTTACGCTGTTTTCGGATTGGGTGATTCCGGATACCAGAAATTCAATTTTGTGGCAAAGAAGCTTGATAGGAGACTTTTGGACCTTGGGGCAACCCCGATTGTCCAAAGAGGTTTGGGAGACGATCAGCACCCGTCAGGGTACGAGGCTGCTCTGGATCCGTGGATGGCATCATTGTGGAATATGTTGTACAAAATTGATCCCAACTACTTCCCCAATGGCCCAGACTTTTTTATTCCATATGAAAATTTTATGGCGAAACCAAAGGTTCGGATTTTATATCACGACATTGACAAGGTGGATTCACAAGTTTCATCTAAATCAGACTTGAATCACATTGCGCTGCAGATTGAAAGGGCACACAGAATGTCTCCTGTGAAGTTTTCTCTTGACAAGCCTGACTGCATTCTTAAATTGGTAAAAAATGAACCACTGACTAAATCAGGTTTTAAAGACAAAGAGGTGCATCACTTCGAATTTGAATTTGCTACATTTCCTATTCCATATGAAGTTGGTGACGTCCTTGAAGTTCTCCCCAGTCAAAATCCTGCTGCAGTGGATGTTTTCATACGCCGTTGTAATTTGGACCCTGAATCATTCATCACAGTTCATCCTTCAGAAATGGAGAATCAACTCCTTGATACTTGTATCCCCATCAAACTAAAAACTTTTGTTGAATTGACAATGGATGTTGCATCAGCTTCTCCTCGACGCTATTTCTTTGAGGTCATGAGTATGTTTGCAACCGCTGAACATGAAAAAGAAAGACTTCAGTATTTTATCTCACCTGAAGGAAGAGATGATCTATACCAATACAATCAGAGGGAACAAAGGACTGTTCTGGAGGTTTTAGAGGATTTCCCCTCTGTTCAAATGCCATTCGAATGGCTGGTACAGTTGGTTCCTCCTTTGAAAAGGAGGGCTTTCTCCATCTCTTCGTCCCCTTCTGCCCACCTCAATCAAGTTCACTTAACAGTTAATGTAGTATCATGGACAACGCCGTTCAAAAGAATTCGAGCAGGTCTCTGCTCAAATTGGCTATCCAAGCTTGATCCTGAGCAAGGTGTTTATGTTCCAGTGTGGTTTCAGAAAGGTTCCCTACCTCCCCCACGACCATCACTTCCTCTCATTCTCATTGGACCTGGAACTGGCTGTGCGCCTTTTCGTGGATTTGTGGAGGAAAGAGCCATACAAAGCTTGACCGAATCAACTGCTCCAGTGCTGTTCTTCTTTGGATGCAGAAACGAGGACAATGATTTTTTGTACAAAGATTTTTGGTTATCCAATTCGCAAGATGGTGGGGTAGTTTCAGAATCAAAGGGCGGGGGCTTTTATGTTGCCTTCTCAAGAGACCAGCCACAGAAGGTCTACGTGCAGGATAAGATGAGGGAGCATAGCGAGAAGGTGTGGAAGCTGCTGATGGAGGGGGCGGCTATTTACGTTGCAGGTTCTTCTACAAAAATGCCAGCAGATGTATTATTAGCCTTTGAGGAGATTGTTTCCAAAGAAAGTGAGCTTCCACAGGAATCGGCAGCGAGATGGCTTAGAGAACTGGAAAAGGCTGGCAGATACCATGTTGAAGCGTGGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010154 GO:0016491 GO:0016651 GO:0022414 GO:0032501 GO:0032502 GO:0035690 GO:0036245 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0055114 GO:0061458 GO:0070887 GO:0071310 GO:1901654 GO:1901655 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

625

Amino Acids

71.22

Weight (kDa)

5.69

Isoelectric Point (pI)

44.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	12 - 149	1.4e-36	Flavodoxin
FAD_binding_1	PF00667	229 - 440	1e-44	FAD binding domain
NAD_binding_1	PF00175	472 - 583	6.4e-11	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004664)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02280 AT3G02280 AT3G02280
fragaria_vesca	FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220
malus_domestica	MD09G1086400.v1.1 MD09G1086700.v1.1 MD09G1087200.v1.1 MD12G1122800.v1.1
prunus_persica	Prupe.3G238300_v2.0.a1 Prupe.3G238300_v2.0.a1
pyrus_communis	pycom09g01200 pycom09g01250 pycom09g01260 pycom12g12160
rosa_chinensis	RchiOBHm_Chr2g0162931
rosa_laevigata	RLG00000021362
rosa_multiflora	Rmu_sc0006129.1_g000002 Rmu_sc0036821.1_g000001
rosa_roxburghii	Rroxscaffold_2G00087700
rosa_rugosa	Rorug02G0499400
rosa_samantha	Rh2AG565400 Rh2BG578100 Rh2CG547800 Rh2DG588300
rosa_wichuraiana	Rw2G046800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	72, 804
Acc36I	ACCTGC	2 cut(s)	1292, 1718
AccI	GTMKAC	1 cut(s)	1650
AccII	CGCG	1 cut(s)	90
AccIII	TCCGGA	1 cut(s)	311
AciI	CCGC	4 cut(s)	88, 1029, 1605, 1712
AclWI	GGATC	5 cut(s)	209, 434, 447, 476, 1328
AcoI	YGGCCR	1 cut(s)	196
AcsI	RAATTY	5 cut(s)	323, 529, 758, 764, 1293
AcuI	CTGAAG	3 cut(s)	882, 1037, 1092
AcyI	GRCGYC	3 cut(s)	69, 144, 801
AfaI	GTAC	4 cut(s)	425, 473, 1176, 1547
AfiI	CCNNNNNNNGG	5 cut(s)	224, 225, 1343, 1430, 1448
AjnI	CCWGG	3 cut(s)	129, 198, 1423
AluBI	AGCT	7 cut(s)	158, 346, 983, 1330, 1479, 1696, 1798
AluI	AGCT	7 cut(s)	158, 346, 983, 1330, 1479, 1696, 1798
Alw26I	GTCTC	5 cut(s)	349, 396, 657, 1310, 1626
AlwI	GGATC	5 cut(s)	209, 434, 447, 476, 1328
AlwNI	CAGNNNCTG	1 cut(s)	108
Aor13HI	TCCGGA	1 cut(s)	311
AoxI	GGCC	3 cut(s)	85, 196, 502
ApeKI	GCWGC	6 cut(s)	108, 431, 625, 833, 1696, 1814
ApoI	RAATTY	5 cut(s)	323, 529, 758, 764, 1293
Asp700I	GAANNNNTTC	1 cut(s)	1050
AspLEI	GCGC	3 cut(s)	102, 625, 1441
AspS9I	GGNCC	6 cut(s)	85, 133, 364, 503, 868, 1421
AsuHPI	GGTGA	3 cut(s)	317, 809, 1059
AsuII	TTCGAA	2 cut(s)	756, 1164
AvaII	GGWCC	4 cut(s)	133, 364, 868, 1421
BaeGI	GKGCMC	2 cut(s)	170, 643
BalI	TGGCCA	1 cut(s)	198
BamHI	GGATCC	1 cut(s)	439
BbvI	GCAGC	6 cut(s)	95, 418, 612, 820, 1683, 1826
BccI	CCATC	7 cut(s)	442, 944, 1220, 1405, 1571, 1696, 1815
BceAI	ACGGC	2 cut(s)	840, 1267
BcgI	CGANNNNNNTGC	2 cut(s)	1475, 1509
BciT130I	CCWGG	3 cut(s)	131, 200, 1425
BciVI	GTATCC	2 cut(s)	308, 941
BcoDI	GTCTC	5 cut(s)	349, 396, 657, 1310, 1626
BfaI	CTAG	2 cut(s)	155, 261
BfmI	CTRYAG	3 cut(s)	245, 626, 834
BfuAI	ACCTGC	2 cut(s)	1292, 1718
BfuI	GTATCC	2 cut(s)	308, 941
BglII	AGATCT	1 cut(s)	238
BisI	GCNGC	8 cut(s)	88, 109, 432, 626, 834, 1697, 1713, 1815
BlsI	GCNGC	8 cut(s)	89, 110, 433, 627, 835, 1698, 1714, 1816
Bme1390I	CCNGG	3 cut(s)	131, 200, 1425
Bme18I	GGWCC	4 cut(s)	133, 364, 868, 1421
BmgT120I	GGNCC	6 cut(s)	85, 133, 364, 503, 868, 1421
BmiI	GGNNCC	4 cut(s)	441, 870, 1185, 1378
BmrFI	CCNGG	3 cut(s)	131, 200, 1425
BmrI	ACTGGG	1 cut(s)	813
BmsI	GCATC	5 cut(s)	140, 461, 757, 986, 1508
BmuI	ACTGGG	1 cut(s)	813
BplI	GAGNNNNNCTC	2 cut(s)	1290, 1322
BpmI	CTGGAG	3 cut(s)	293, 1145, 1482
Bpu10I	CCTNAGC	1 cut(s)	1338
Bpu14I	TTCGAA	2 cut(s)	756, 1164
BpuEI	CTTGAG	2 cut(s)	144, 1612
BsaAI	YACGTR	1 cut(s)	1654
BsaHI	GRCGYC	3 cut(s)	69, 144, 801
BsaI	GGTCTC	2 cut(s)	1310, 1626
BsaJI	CCNNGG	4 cut(s)	129, 199, 367, 443
BsaWI	WCCGGW	2 cut(s)	53, 311
BsaXI	ACNNNNNCTCC	2 cut(s)	110, 140
Bsc4I	CCNNNNNNNGG	5 cut(s)	224, 225, 1343, 1430, 1448
Bse1I	ACTGG	6 cut(s)	199, 819, 1358, 1435, 1499, 1839
Bse3DI	GCAATG	2 cut(s)	272, 618
BseAI	TCCGGA	1 cut(s)	311
BseBI	CCWGG	3 cut(s)	131, 200, 1425
BseDI	CCNNGG	4 cut(s)	129, 199, 367, 443
BseGI	GGATG	5 cut(s)	453, 847, 892, 976, 1523
BseLI	CCNNNNNNNGG	5 cut(s)	224, 225, 1343, 1430, 1448
BseMI	GCAATG	2 cut(s)	272, 618
BseMII	CTCAG	1 cut(s)	1329
BseNI	ACTGG	6 cut(s)	199, 819, 1358, 1435, 1499, 1839
BseRI	GAGGAG	4 cut(s)	20, 23, 978, 1787
BseSI	GKGCMC	2 cut(s)	170, 643
BseXI	GCAGC	6 cut(s)	95, 418, 612, 820, 1683, 1826
BsgI	GTGCAG	1 cut(s)	1676
Bsh1236I	CGCG	1 cut(s)	90
BshFI	GGCC	3 cut(s)	87, 198, 504
BsiSI	CCGG	2 cut(s)	54, 312
BslFI	GGGAC	2 cut(s)	291, 1207
BslI	CCNNNNNNNGG	5 cut(s)	224, 225, 1343, 1430, 1448
BsmAI	GTCTC	5 cut(s)	349, 396, 657, 1310, 1626
BsmBI	CGTCTC	1 cut(s)	396
BsmFI	GGGAC	2 cut(s)	291, 1207
BsmI	GAATGC	1 cut(s)	687
BsnI	GGCC	3 cut(s)	87, 198, 504
Bso31I	GGTCTC	2 cut(s)	1310, 1626
Bsp119I	TTCGAA	2 cut(s)	756, 1164
Bsp1286I	GDGCHC	2 cut(s)	170, 643
Bsp13I	TCCGGA	1 cut(s)	311
Bsp1407I	TGTACA	2 cut(s)	471, 1545
Bsp143I	GATC	7 cut(s)	214, 238, 406, 439, 481, 1084, 1333
BspACI	CCGC	4 cut(s)	88, 1029, 1605, 1712
BspANI	GGCC	3 cut(s)	87, 198, 504
BspCNI	CTCAG	1 cut(s)	1330
BspEI	TCCGGA	1 cut(s)	311
BspFNI	CGCG	1 cut(s)	90
BspHI	TCATGA	1 cut(s)	1011
BspLI	GGNNCC	4 cut(s)	441, 870, 1185, 1378
BspMAI	CTGCAG	3 cut(s)	249, 630, 838
BspMI	ACCTGC	2 cut(s)	1292, 1718
BspPI	GGATC	5 cut(s)	209, 434, 447, 476, 1328
BspT104I	TTCGAA	2 cut(s)	756, 1164
BspTNI	GGTCTC	2 cut(s)	1310, 1626
BsrDI	GCAATG	2 cut(s)	272, 618
BsrGI	TGTACA	2 cut(s)	471, 1545
BsrI	ACTGG	6 cut(s)	199, 819, 1358, 1435, 1499, 1839
BssECI	CCNNGG	4 cut(s)	129, 199, 367, 443
BssMI	GATC	7 cut(s)	214, 238, 406, 439, 481, 1084, 1333
BssNI	GRCGYC	3 cut(s)	69, 144, 801
BssT1I	CCWWGG	1 cut(s)	367
Bst2UI	CCWGG	3 cut(s)	131, 200, 1425
Bst4CI	ACNGT	5 cut(s)	172, 889, 1120, 1179, 1258
Bst6I	CTCTTC	2 cut(s)	1072, 1222
BstACI	GRCGYC	3 cut(s)	69, 144, 801
BstAPI	GCANNNNNTGC	1 cut(s)	108
BstAUI	TGTACA	2 cut(s)	471, 1545
BstBAI	YACGTR	1 cut(s)	1654
BstBI	TTCGAA	2 cut(s)	756, 1164
BstC8I	GCNNGC	2 cut(s)	1749, 1846
BstDEI	CTNAG	2 cut(s)	1338, 1826
BstDSI	CCRYGG	1 cut(s)	443
BstENI	CCTNNNNNAGG	1 cut(s)	1341
BstF5I	GGATG	5 cut(s)	453, 847, 892, 976, 1523
BstFNI	CGCG	1 cut(s)	90
BstHHI	GCGC	3 cut(s)	102, 625, 1441
BstKTI	GATC	7 cut(s)	217, 241, 409, 442, 484, 1087, 1336
BstMAI	GTCTC	5 cut(s)	349, 396, 657, 1310, 1626
BstMBI	GATC	7 cut(s)	214, 238, 406, 439, 481, 1084, 1333
BstMWI	GCNNNNNNNGC	2 cut(s)	108, 1327
BstNI	CCWGG	3 cut(s)	131, 200, 1425
BstSCI	CCNGG	3 cut(s)	129, 198, 1423
BstSFI	CTRYAG	3 cut(s)	245, 626, 834
BstSLI	GKGCMC	2 cut(s)	170, 643
BstUI	CGCG	1 cut(s)	90
BstV1I	GCAGC	6 cut(s)	95, 418, 612, 820, 1683, 1826
BstX2I	RGATCY	2 cut(s)	238, 439
BstXI	CCANNNNNNTGG	1 cut(s)	1167
BstYI	RGATCY	2 cut(s)	238, 439
BsuI	GTATCC	2 cut(s)	308, 941
BsuRI	GGCC	3 cut(s)	87, 198, 504
BtgI	CCRYGG	1 cut(s)	443
BtsCI	GGATG	5 cut(s)	453, 847, 892, 976, 1523
BtsI	GCAGTG	1 cut(s)	843
BtsIMutI	CAGTG	6 cut(s)	168, 192, 713, 843, 1365, 1506
BveI	ACCTGC	2 cut(s)	1292, 1718
Cac8I	GCNNGC	2 cut(s)	1749, 1846
CaiI	CAGNNNCTG	1 cut(s)	108
CciI	TCATGA	1 cut(s)	1011
CfoI	GCGC	3 cut(s)	102, 625, 1441
Cfr13I	GGNCC	6 cut(s)	85, 133, 364, 503, 868, 1421
CseI	GACGC	2 cut(s)	152, 1002
Csp6I	GTAC	4 cut(s)	424, 472, 1175, 1546
CviAII	CATG	5 cut(s)	220, 1012, 1037, 1272, 1856
CviQI	GTAC	4 cut(s)	424, 472, 1175, 1546
DdeI	CTNAG	2 cut(s)	1338, 1826
DpnI	GATC	7 cut(s)	216, 240, 408, 441, 483, 1086, 1335
DpnII	GATC	7 cut(s)	214, 238, 406, 439, 481, 1084, 1333
DraI	TTTAAA	1 cut(s)	733
EaeI	YGGCCR	1 cut(s)	196
Eam1104I	CTCTTC	2 cut(s)	1072, 1222
EarI	CTCTTC	2 cut(s)	1072, 1222
Eco130I	CCWWGG	1 cut(s)	367
Eco31I	GGTCTC	2 cut(s)	1310, 1626
Eco47I	GGWCC	4 cut(s)	133, 364, 868, 1421
Eco57I	CTGAAG	3 cut(s)	882, 1037, 1092
EcoNI	CCTNNNNNAGG	1 cut(s)	1341
EcoRI	GAATTC	1 cut(s)	1293
EcoRII	CCWGG	3 cut(s)	129, 198, 1423
EcoT14I	CCWWGG	1 cut(s)	367
ErhI	CCWWGG	1 cut(s)	367
Esp3I	CGTCTC	1 cut(s)	396
FaeI	CATG	5 cut(s)	223, 1015, 1040, 1275, 1859
FalI	AAGNNNNNCTT	4 cut(s)	1035, 1067, 1189, 1221
FaqI	GGGAC	2 cut(s)	291, 1207
FatI	CATG	5 cut(s)	219, 1011, 1036, 1271, 1855
FauI	CCCGC	1 cut(s)	1598
FauNDI	CATATG	2 cut(s)	523, 787
FblI	GTMKAC	1 cut(s)	1650
Fnu4HI	GCNGC	8 cut(s)	88, 109, 432, 626, 834, 1697, 1713, 1815
FokI	GGATG	5 cut(s)	460, 854, 879, 983, 1530
Fsp4HI	GCNGC	8 cut(s)	88, 109, 432, 626, 834, 1697, 1713, 1815
FspBI	CTAG	2 cut(s)	155, 261
GlaI	GCGC	3 cut(s)	101, 624, 1440
GluI	GCNGC	8 cut(s)	88, 109, 432, 626, 834, 1697, 1713, 1815
GsuI	CTGGAG	3 cut(s)	293, 1145, 1482
HaeIII	GGCC	3 cut(s)	87, 198, 504
HapII	CCGG	2 cut(s)	54, 312
HgaI	GACGC	2 cut(s)	152, 1002
HhaI	GCGC	3 cut(s)	102, 625, 1441
Hin1I	GRCGYC	3 cut(s)	69, 144, 801
Hin1II	CATG	5 cut(s)	223, 1015, 1040, 1275, 1859
Hin6I	GCGC	3 cut(s)	100, 623, 1439
HinP1I	GCGC	3 cut(s)	100, 623, 1439
HindIII	AAGCTT	3 cut(s)	344, 1328, 1477
HinfI	GANTC	9 cut(s)	279, 308, 584, 613, 875, 910, 1487, 1595, 1808
HpaII	CCGG	2 cut(s)	54, 312
HphI	GGTGA	3 cut(s)	317, 809, 1059
Hpy166II	GTNNAC	3 cut(s)	118, 1249, 1651
Hpy188I	TCNGA	8 cut(s)	258, 299, 555, 607, 901, 1104, 1371, 1594
Hpy8I	GTNNAC	3 cut(s)	118, 1249, 1651
Hpy99I	CGWCG	3 cut(s)	74, 146, 996
HpyAV	CCTTC	8 cut(s)	131, 217, 906, 1067, 1236, 1633, 1639, 1678
HpyCH4III	ACNGT	5 cut(s)	172, 889, 1120, 1179, 1258
HpyCH4IV	ACGT	4 cut(s)	69, 801, 1653, 1722
HpyF10VI	GCNNNNNNNGC	2 cut(s)	108, 1327
HpyF3I	CTNAG	2 cut(s)	1338, 1826
HpySE526I	ACGT	4 cut(s)	69, 801, 1653, 1722
Hsp92I	GRCGYC	3 cut(s)	69, 144, 801
Hsp92II	CATG	5 cut(s)	223, 1015, 1040, 1275, 1859
HspAI	GCGC	3 cut(s)	100, 623, 1439
Kpn2I	TCCGGA	1 cut(s)	311
Kzo9I	GATC	7 cut(s)	214, 238, 406, 439, 481, 1084, 1333
LmnI	GCTCC	2 cut(s)	1501, 1672
Lsp1109I	GCAGC	6 cut(s)	95, 418, 612, 820, 1683, 1826
LweI	GCATC	5 cut(s)	140, 461, 757, 986, 1508
MaeI	CTAG	2 cut(s)	155, 261
MaeII	ACGT	4 cut(s)	69, 801, 1653, 1722
MaeIII	GTNAC	2 cut(s)	284, 797
MalI	GATC	7 cut(s)	216, 240, 408, 441, 483, 1086, 1335
MboI	GATC	7 cut(s)	214, 238, 406, 439, 481, 1084, 1333
MboII	GAAGA	5 cut(s)	233, 1089, 1209, 1501, 1725
MflI	RGATCY	2 cut(s)	238, 439
MhlI	GDGCHC	2 cut(s)	170, 643
MlsI	TGGCCA	1 cut(s)	198
MluNI	TGGCCA	1 cut(s)	198
MlyI	GAGTC	1 cut(s)	273
Mox20I	TGGCCA	1 cut(s)	198
MroI	TCCGGA	1 cut(s)	311
MroXI	GAANNNNTTC	1 cut(s)	1050
MscI	TGGCCA	1 cut(s)	198
MseI	TTAA	4 cut(s)	693, 732, 1253, 1260
MslI	CAYNNNNRTG	3 cut(s)	457, 1016, 1165
Msp20I	TGGCCA	1 cut(s)	198
MspA1I	CMGCKG	1 cut(s)	1031
MspI	CCGG	2 cut(s)	54, 312
MspR9I	CCNGG	3 cut(s)	131, 200, 1425
Mva1269I	GAATGC	1 cut(s)	687
MvaI	CCWGG	3 cut(s)	131, 200, 1425
MvnI	CGCG	1 cut(s)	90
MwoI	GCNNNNNNNGC	2 cut(s)	108, 1327
NdeI	CATATG	2 cut(s)	523, 787
NdeII	GATC	7 cut(s)	214, 238, 406, 439, 481, 1084, 1333
NlaIII	CATG	5 cut(s)	223, 1015, 1040, 1275, 1859
NlaIV	GGNNCC	4 cut(s)	441, 870, 1185, 1378
NmeAIII	GCCGAG	2 cut(s)	100, 121
NmuCI	GTSAC	1 cut(s)	797
NspV	TTCGAA	2 cut(s)	756, 1164
PagI	TCATGA	1 cut(s)	1011
PcsI	WCGNNNNNNNCGW	1 cut(s)	66
PctI	GAATGC	1 cut(s)	687
PdmI	GAANNNNTTC	1 cut(s)	1050
PfeI	GAWTC	8 cut(s)	308, 584, 613, 875, 910, 1487, 1595, 1808
PkrI	GCNGC	8 cut(s)	89, 110, 433, 627, 835, 1698, 1714, 1816
PleI	GAGTC	1 cut(s)	273
PpsI	GAGTC	1 cut(s)	273
Ppu21I	YACGTR	1 cut(s)	1654
Psp6I	CCWGG	3 cut(s)	129, 198, 1423
PspGI	CCWGG	3 cut(s)	129, 198, 1423
PspN4I	GGNNCC	4 cut(s)	441, 870, 1185, 1378
PspPI	GGNCC	6 cut(s)	85, 133, 364, 503, 868, 1421
PsrI	GAACNNNNNNTAC	2 cut(s)	1167, 1199
PstI	CTGCAG	3 cut(s)	249, 630, 838
PstNI	CAGNNNCTG	1 cut(s)	108
PsuI	RGATCY	2 cut(s)	238, 439
RsaI	GTAC	4 cut(s)	425, 473, 1176, 1547
RsaNI	GTAC	4 cut(s)	424, 472, 1175, 1546
RseI	CAYNNNNRTG	3 cut(s)	457, 1016, 1165
SaqAI	TTAA	4 cut(s)	693, 732, 1253, 1260
SatI	GCNGC	8 cut(s)	88, 109, 432, 626, 834, 1697, 1713, 1815
Sau3AI	GATC	7 cut(s)	214, 238, 406, 439, 481, 1084, 1333
Sau96I	GGNCC	6 cut(s)	85, 133, 364, 503, 868, 1421
SchI	GAGTC	1 cut(s)	273
ScrFI	CCNGG	3 cut(s)	131, 200, 1425
SduI	GDGCHC	2 cut(s)	170, 643
SfaNI	GCATC	5 cut(s)	140, 461, 757, 986, 1508
SfcI	CTRYAG	3 cut(s)	245, 626, 834
SfuI	TTCGAA	2 cut(s)	756, 1164
SinI	GGWCC	4 cut(s)	133, 364, 868, 1421
SmiMI	CAYNNNNRTG	3 cut(s)	457, 1016, 1165
SmlI	CTYRAG	2 cut(s)	159, 1627
SmoI	CTYRAG	2 cut(s)	159, 1627
SsiI	CCGC	4 cut(s)	88, 1029, 1605, 1712
SspMI	CTAG	2 cut(s)	155, 261
StyD4I	CCNGG	3 cut(s)	129, 198, 1423
StyI	CCWWGG	1 cut(s)	367
TaaI	ACNGT	5 cut(s)	172, 889, 1120, 1179, 1258
TaiI	ACGT	4 cut(s)	72, 804, 1656, 1725
TaqI	TCGA	4 cut(s)	756, 991, 1164, 1297
TaqII	GACCGA	1 cut(s)	1499
TatI	WGTACW	2 cut(s)	471, 1545
TauI	GCSGC	2 cut(s)	90, 1715
TfiI	GAWTC	8 cut(s)	308, 584, 613, 875, 910, 1487, 1595, 1808
Tru1I	TTAA	4 cut(s)	693, 732, 1253, 1260
Tru9I	TTAA	4 cut(s)	693, 732, 1253, 1260
TscAI	CASTG	6 cut(s)	175, 199, 720, 843, 1365, 1506
TseFI	GTSAC	1 cut(s)	797
TseI	GCWGC	6 cut(s)	108, 431, 625, 833, 1696, 1814
Tsp45I	GTSAC	1 cut(s)	797
TspDTI	ATGAA	9 cut(s)	236, 540, 585, 723, 804, 838, 871, 881, 1053
TspGWI	ACGGA	2 cut(s)	272, 432
TspRI	CASTG	6 cut(s)	175, 199, 720, 843, 1365, 1506
VpaK11BI	GGWCC	4 cut(s)	133, 364, 868, 1421
XagI	CCTNNNNNAGG	1 cut(s)	1341
XapI	RAATTY	5 cut(s)	323, 529, 758, 764, 1293
XmiI	GTMKAC	1 cut(s)	1650
XmnI	GAANNNNTTC	1 cut(s)	1050
XspI	CTAG	2 cut(s)	155, 261
ZraI	GACGTC	2 cut(s)	70, 802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.