Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002980

Physical Location & Seq

Genomic Coordinates Reverse (-)

63174341 .. 63178259

Gene Structure 3919 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0499400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGGGGTTCCGGTGAATTTTCTGTCCCAGCTATGGAGTTTCATCTCCTTCCTACCTTTCTTCTTCTTGCTTCTCATCCTCGGCCTCGTCAAAGCTGCAATCATTGGGCCGGTGGCGCTATGCATTATTTTCATTGGAAATTCAGCTGTAATTGCTGGGCTTTGGATAGCACATTTTGTTTGGACGTACTACGGCGTAGCAAGAAGCAAGAGGCTTGGACTTGTGTTAAAGATTCTAGTGCTGGTATTACTTCCGGTGCCGCTTGTCCTTTGGCCGGTCGTTGGAGTTGTCGGGAGTCTTTTAGGTGGGATTGGATATGGGTTTTTTTCTCCCCTTCTTGCGACATTTGAGGCTGTTGGCGAGAATGTCCCTGACAAGTTCTACCACTGCTTTGTAGATGGTTCCTGGTCGACAATCAAAGGAAGCTGCATAATCGTCCAGGATCTCACAGATTTTTGCTTCCATTCTTACTTCTCCTACATGGATGAACTAATGGAACAGACACCTGCCGATGAAAAGCCCATGGATATAGAGTTGATGAAACTGCCAGGTTGTTTGTTGGTGAGTGTGATTGGAGTCCCAGCGGACGTGTCTTTGATTACAGCTGTTGCACTATGGAAAAGTCCATACATGCTGTTTAAAGGATGGAAGAGGCTATTAGAAGACTTGATAGGCAGAGAGGGACCATTCTTGGAAACAGAATGTGTTCCATTTGCTGGTCTTGCCATTCTTCTATGGCCTCTGGCAGTTGTTGGAGGTGTAGTAGCTTCTTTCTTCTGCAGCTTCTTTTTAGGACTATATAGTGGTGCTATTGTGTATCAGGAAGACTCAGTCCGCCTGGGACTTGCCTTCATCGTTTCAGTGGTTTCACTGTATGATGAATATGTAAATGATTTACTGTACTTGAGGGAGGGATCCTGCTTTCCCAGGCCGATATACCGTAGAAATATGAGCTTTTGCTCGGAGATGAAGAGCTCTGGTGACAATGATAATAATGATTCGAAGAACGGTAGAGAAGGCTTATATAGATCAAAACTTGTGTCGCAACAATCAAGAATTTGGAAGCAGGCACTCCACCGATATAAAGCAGTGCAGGTGTGGGGCTGGCTATTCAAATCTTGCGAGATTAATGGTAGAATTCTCCTTCGTGATGGTCTGATAGATGTCAAGGATGTAGAAGAATGTATCTTGAAGGGAAACTGTAAGAAGTTGGGAATCAAACTACCTGCTTGGTCGATATTTCAATGTCTTCTTGTGTCAGCCAAGTCTAGTTCGTCCGGGTTGGTAATATCTGATGATGTAGAGTTGACAAAGTCAAATGGGCCAAGGGATAAAGTGTTCGACTGGTTCATTGGACCATTGTTGATCATGAAAGAGCAAATAAGGAATATGCAACTGGACGCGAACGAAGAAATGGCTCTGAGATATGTGTTTATGAAATGCAAAATTGAAACACCTGAGGAGTGGGATGGCACTGAATTTCCATCTGCAGATCCTGTCCGAAGGGCACAGTTGCAAGCCATATTTAGAAGACTACAGGGTCTCATAGCTTCCATGTCTAGGGTGCCAACATTCAGACGCCGCTTTAGAAATTTGGTAAAGGTTCTGTATCTAGAAGCAGTTCAGTCTGCTGCTTCTGGTCATCACATAGGAGGAATATTAACTCCTGGAAAGGGCAACCAGAGTGTGATGGGAAGTGAGGACGAGAAAGAATCAAAGGAAGGAGACAAGATTGTTGTGGATGTAGCAGAACGGAATACTTGTGACAATGGGAACAACAGTTTGATGGTAAGTGAGAACGAGAAAGAATCAAAGGAAGGAGAAGTAATTGTTCTGGATGTAGCAGAACGGAATACTTATGACAATGGGAACAAGAGTTTGATGGGAAGTGAGAAGGAAGGAGAAGAAATTTTTGTGGACGTAGCAGAACAGAATACGTATGACAATGGGAAAAGGAGTTCAATGGGAAGTGAGAGACGGAAAGAATCGAAGGAAGGAGAAGAAATTGTTGTGGATGTAGCAGAACAGAATATTTATAACAATGGGAACATAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010154 GO:0016491 GO:0016651 GO:0022414 GO:0032501 GO:0032502 GO:0035690 GO:0036245 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0055114 GO:0061458 GO:0070887 GO:0071310 GO:1901654 GO:1901655 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

685

Amino Acids

76.5

Weight (kDa)

5.35

Isoelectric Point (pI)

47.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67140 AT1G67140 AT1G67140
fragaria_vesca	FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230
malus_domestica	MD12G1002400.v1.1 MD14G1001900.v1.1
prunus_persica	Prupe.7G002300_v2.0.a1 Prupe.7G002300_v2.0.a1 Prupe.7G002300_v2.0.a1 Prupe.7G002300_v2.0.a1
pyrus_communis	pycom12g00210 pycom49g00150 pycom49g00160
rosa_chinensis	RchiOBHm_Chr2g0162941 RchiOBHm_Chr2g0166391
rosa_laevigata	RLG00000021363
rosa_multiflora	Rmu_co8336279.1_g000001 Rmu_co8361777.1_g000001 Rmu_co8457597.1_g000001 Rmu_sc0000587.1_g000001
rosa_roxburghii	Rroxscaffold_2G00087690
rosa_rugosa	Rorug02G0499400
rosa_samantha	Rh2AG565500 Rh2AG588800 Rh2BG578200 Rh2CG547900 Rh2DG588400 Rh2DG611100
rosa_wichuraiana	Rw2G046810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2037
AarI	CACCTGC	2 cut(s)	514, 1084
AasI	GACNNNNNNGTC	1 cut(s)	1539
Acc36I	ACCTGC	3 cut(s)	514, 1084, 1234
AccB1I	GGYRCC	2 cut(s)	256, 1564
AccB7I	CCANNNNNTGG	1 cut(s)	716
AccI	GTMKAC	1 cut(s)	410
AccII	CGCG	1 cut(s)	1403
AciI	CCGC	4 cut(s)	260, 584, 835, 1582
AclWI	GGATC	4 cut(s)	450, 909, 922, 1487
AcoI	YGGCCR	1 cut(s)	272
AcsI	RAATTY	7 cut(s)	16, 139, 1056, 1137, 1478, 1591, 1908
AcyI	GRCGYC	1 cut(s)	1579
AfaI	GTAC	2 cut(s)	188, 902
AfiI	CCNNNNNNNGG	6 cut(s)	33, 274, 281, 716, 1560, 1673
AflIII	ACRYGT	1 cut(s)	588
AgsI	TTSAA	5 cut(s)	1114, 1192, 1244, 1451, 1962
AjiI	CACGTC	1 cut(s)	589
AjnI	CCWGG	6 cut(s)	404, 438, 547, 837, 926, 1666
AloI	GAACNNNNNNTCC	4 cut(s)	1322, 1354, 1942, 1974
Alw21I	GWGCWC	1 cut(s)	977
Alw26I	GTCTC	3 cut(s)	1547, 1719, 1969
AlwI	GGATC	4 cut(s)	450, 909, 922, 1487
AlwNI	CAGNNNCTG	1 cut(s)	1496
AoxI	GGCC	6 cut(s)	82, 107, 272, 737, 929, 1322
ApeKI	GCWGC	4 cut(s)	95, 426, 780, 1631
ApoI	RAATTY	7 cut(s)	16, 139, 1056, 1137, 1478, 1591, 1908
ArsI	GACNNNNNNTTYG	2 cut(s)	1025, 1057
AseI	ATTAAT	1 cut(s)	1128
Asp700I	GAANNNNTTC	2 cut(s)	705, 1620
AspLEI	GCGC	1 cut(s)	118
AspS9I	GGNCC	4 cut(s)	107, 683, 1322, 1355
AsuC2I	CCSGG	1 cut(s)	1279
AsuHPI	GGTGA	3 cut(s)	25, 574, 992
AsuII	TTCGAA	1 cut(s)	1001
AvaII	GGWCC	2 cut(s)	683, 1355
AxyI	CCTNAGG	1 cut(s)	1458
BaeGI	GKGCMC	1 cut(s)	1510
BamHI	GGATCC	1 cut(s)	914
BanI	GGYRCC	2 cut(s)	256, 1564
BanII	GRGCYC	1 cut(s)	977
BbsI	GAAGAC	4 cut(s)	669, 831, 1241, 1537
Bbv12I	GWGCWC	1 cut(s)	977
BbvI	GCAGC	4 cut(s)	82, 413, 792, 1618
BccI	CCATC	8 cut(s)	392, 639, 1145, 1463, 1492, 1684, 1780, 1876
BceAI	ACGGC	1 cut(s)	208
BciT130I	CCWGG	6 cut(s)	406, 440, 549, 839, 928, 1668
BclI	TGATCA	1 cut(s)	1365
BcnI	CCSGG	1 cut(s)	1279
BcoDI	GTCTC	3 cut(s)	1547, 1719, 1969
BfaI	CTAG	4 cut(s)	236, 1269, 1560, 1613
BfmI	CTRYAG	3 cut(s)	778, 1488, 1535
BfoI	RGCGCY	1 cut(s)	119
BfuAI	ACCTGC	3 cut(s)	514, 1084, 1234
BisI	GCNGC	6 cut(s)	96, 260, 427, 781, 1582, 1632
BlsI	GCNGC	6 cut(s)	97, 261, 428, 782, 1583, 1633
Bme1390I	CCNGG	7 cut(s)	406, 440, 549, 839, 928, 1279, 1668
Bme18I	GGWCC	2 cut(s)	683, 1355
BmgBI	CACGTC	1 cut(s)	589
BmgT120I	GGNCC	4 cut(s)	107, 683, 1322, 1355
BmiI	GGNNCC	6 cut(s)	9, 258, 403, 684, 916, 1566
BmrFI	CCNGG	7 cut(s)	406, 440, 549, 839, 928, 1279, 1668
BpiI	GAAGAC	4 cut(s)	669, 831, 1241, 1537
Bpu14I	TTCGAA	1 cut(s)	1001
BpuEI	CTTGAG	1 cut(s)	925
BpuMI	CCSGG	1 cut(s)	1279
BsaAI	YACGTR	1 cut(s)	1938
BsaHI	GRCGYC	1 cut(s)	1579
BsaI	GGTCTC	1 cut(s)	1547
BsaJI	CCNNGG	5 cut(s)	79, 522, 838, 926, 1325
BsaWI	WCCGGW	2 cut(s)	10, 253
BsaXI	ACNNNNNCTCC	2 cut(s)	747, 777
Bsc4I	CCNNNNNNNGG	6 cut(s)	33, 274, 281, 716, 1560, 1673
Bse118I	RCCGGY	2 cut(s)	109, 274
Bse1I	ACTGG	2 cut(s)	1349, 1401
Bse21I	CCTNAGG	1 cut(s)	1458
BseBI	CCWGG	6 cut(s)	406, 440, 549, 839, 928, 1668
BseDI	CCNNGG	5 cut(s)	79, 522, 838, 926, 1325
BseGI	GGATG	8 cut(s)	75, 490, 650, 1177, 1474, 1747, 1843, 2020
BseLI	CCNNNNNNNGG	6 cut(s)	33, 274, 281, 716, 1560, 1673
BseMII	CTCAG	3 cut(s)	843, 1412, 1449
BseNI	ACTGG	2 cut(s)	1349, 1401
BseRI	GAGGAG	1 cut(s)	1475
BseSI	GKGCMC	1 cut(s)	1510
BseXI	GCAGC	4 cut(s)	82, 413, 792, 1618
BseYI	CCCAGC	3 cut(s)	27, 155, 580
BsgI	GTGCAG	1 cut(s)	1112
Bsh1236I	CGCG	1 cut(s)	1403
Bsh1285I	CGRYCG	1 cut(s)	279
BshFI	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
BshNI	GGYRCC	2 cut(s)	256, 1564
BsiEI	CGRYCG	1 cut(s)	279
BsiHKAI	GWGCWC	1 cut(s)	977
BsiSI	CCGG	5 cut(s)	11, 110, 254, 275, 1278
BslFI	GGGAC	5 cut(s)	10, 353, 563, 696, 855
BslI	CCNNNNNNNGG	6 cut(s)	33, 274, 281, 716, 1560, 1673
BsmAI	GTCTC	3 cut(s)	1547, 1719, 1969
BsmBI	CGTCTC	1 cut(s)	1969
BsmFI	GGGAC	5 cut(s)	10, 353, 563, 696, 855
BsnI	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
Bso31I	GGTCTC	1 cut(s)	1547
Bsp119I	TTCGAA	1 cut(s)	1001
Bsp1286I	GDGCHC	2 cut(s)	977, 1510
Bsp143I	GATC	5 cut(s)	442, 914, 1028, 1365, 1492
Bsp19I	CCATGG	1 cut(s)	522
BspACI	CCGC	4 cut(s)	260, 584, 835, 1582
BspANI	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
BspCNI	CTCAG	3 cut(s)	842, 1413, 1450
BspFNI	CGCG	1 cut(s)	1403
BspHI	TCATGA	1 cut(s)	1368
BspLI	GGNNCC	6 cut(s)	9, 258, 403, 684, 916, 1566
BspMAI	CTGCAG	2 cut(s)	782, 1492
BspMI	ACCTGC	3 cut(s)	514, 1084, 1234
BspPI	GGATC	4 cut(s)	450, 909, 922, 1487
BspQI	GCTCTTC	1 cut(s)	965
BspT104I	TTCGAA	1 cut(s)	1001
BspT107I	GGYRCC	2 cut(s)	256, 1564
BspTNI	GGTCTC	1 cut(s)	1547
BsrFI	RCCGGY	2 cut(s)	109, 274
BsrI	ACTGG	2 cut(s)	1349, 1401
BssAI	RCCGGY	2 cut(s)	109, 274
BssECI	CCNNGG	5 cut(s)	79, 522, 838, 926, 1325
BssMI	GATC	5 cut(s)	442, 914, 1028, 1365, 1492
BssNI	GRCGYC	1 cut(s)	1579
BssT1I	CCWWGG	2 cut(s)	522, 1325
Bst2UI	CCWGG	6 cut(s)	406, 440, 549, 839, 928, 1668
Bst4CI	ACNGT	7 cut(s)	873, 900, 941, 1010, 1202, 1512, 1781
Bst6I	CTCTTC	2 cut(s)	644, 965
BstACI	GRCGYC	1 cut(s)	1579
BstBAI	YACGTR	1 cut(s)	1938
BstBI	TTCGAA	1 cut(s)	1001
BstC8I	GCNNGC	3 cut(s)	1068, 1106, 1518
BstDEI	CTNAG	3 cut(s)	829, 1421, 1458
BstDSI	CCRYGG	1 cut(s)	522
BstF5I	GGATG	8 cut(s)	75, 490, 650, 1177, 1474, 1747, 1843, 2020
BstFNI	CGCG	1 cut(s)	1403
BstH2I	RGCGCY	1 cut(s)	119
BstHHI	GCGC	1 cut(s)	118
BstKTI	GATC	5 cut(s)	445, 917, 1031, 1368, 1495
BstMAI	GTCTC	3 cut(s)	1547, 1719, 1969
BstMBI	GATC	5 cut(s)	442, 914, 1028, 1365, 1492
BstMCI	CGRYCG	1 cut(s)	279
BstMWI	GCNNNNNNNGC	3 cut(s)	115, 152, 722
BstNI	CCWGG	6 cut(s)	406, 440, 549, 839, 928, 1668
BstNSI	RCATGY	1 cut(s)	634
BstSCI	CCNGG	7 cut(s)	404, 438, 547, 837, 926, 1277, 1666
BstSFI	CTRYAG	3 cut(s)	778, 1488, 1535
BstSLI	GKGCMC	1 cut(s)	1510
BstSNI	TACGTA	1 cut(s)	1938
BstUI	CGCG	1 cut(s)	1403
BstV1I	GCAGC	4 cut(s)	82, 413, 792, 1618
BstV2I	GAAGAC	4 cut(s)	669, 831, 1241, 1537
BstX2I	RGATCY	3 cut(s)	442, 914, 1492
BstYI	RGATCY	3 cut(s)	442, 914, 1492
Bsu36I	CCTNAGG	1 cut(s)	1458
BsuRI	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
BtgI	CCRYGG	1 cut(s)	522
BtrI	CACGTC	1 cut(s)	589
BtsCI	GGATG	8 cut(s)	75, 490, 650, 1177, 1474, 1747, 1843, 2020
BtsI	GCAGTG	2 cut(s)	385, 1095
BtsIMutI	CAGTG	5 cut(s)	385, 867, 869, 1095, 1473
BveI	ACCTGC	3 cut(s)	514, 1084, 1234
Cac8I	GCNNGC	3 cut(s)	1068, 1106, 1518
CaiI	CAGNNNCTG	1 cut(s)	1496
CciI	TCATGA	1 cut(s)	1368
CfoI	GCGC	1 cut(s)	118
Cfr10I	RCCGGY	2 cut(s)	109, 274
Cfr13I	GGNCC	4 cut(s)	107, 683, 1322, 1355
CseI	GACGC	2 cut(s)	1409, 1587
Csp6I	GTAC	2 cut(s)	187, 901
CviAII	CATG	5 cut(s)	481, 523, 631, 1369, 1555
CviQI	GTAC	2 cut(s)	187, 901
DdeI	CTNAG	3 cut(s)	829, 1421, 1458
DpnI	GATC	5 cut(s)	444, 916, 1030, 1367, 1494
DpnII	GATC	5 cut(s)	442, 914, 1028, 1365, 1492
DraI	TTTAAA	1 cut(s)	640
DrdI	GACNNNNNNGTC	1 cut(s)	1539
DseDI	GACNNNNNNGTC	1 cut(s)	1539
EaeI	YGGCCR	1 cut(s)	272
Eam1104I	CTCTTC	2 cut(s)	644, 965
EarI	CTCTTC	2 cut(s)	644, 965
EciI	GGCGGA	1 cut(s)	824
Ecl136II	GAGCTC	1 cut(s)	975
Eco105I	TACGTA	1 cut(s)	1938
Eco130I	CCWWGG	2 cut(s)	522, 1325
Eco24I	GRGCYC	1 cut(s)	977
Eco31I	GGTCTC	1 cut(s)	1547
Eco47I	GGWCC	2 cut(s)	683, 1355
Eco53kI	GAGCTC	1 cut(s)	975
Eco81I	CCTNAGG	1 cut(s)	1458
EcoICRI	GAGCTC	1 cut(s)	975
EcoRI	GAATTC	1 cut(s)	1137
EcoRII	CCWGG	6 cut(s)	404, 438, 547, 837, 926, 1666
EcoT14I	CCWWGG	2 cut(s)	522, 1325
EcoT22I	ATGCAT	1 cut(s)	125
EcoT38I	GRGCYC	1 cut(s)	977
ErhI	CCWWGG	2 cut(s)	522, 1325
Esp3I	CGTCTC	1 cut(s)	1969
FaeI	CATG	5 cut(s)	484, 526, 634, 1372, 1558
FaqI	GGGAC	5 cut(s)	10, 353, 563, 696, 855
FatI	CATG	5 cut(s)	480, 522, 630, 1368, 1554
FbaI	TGATCA	1 cut(s)	1365
FblI	GTMKAC	1 cut(s)	410
Fnu4HI	GCNGC	6 cut(s)	96, 260, 427, 781, 1582, 1632
FokI	GGATG	8 cut(s)	62, 497, 657, 1184, 1481, 1754, 1850, 2027
FriOI	GRGCYC	1 cut(s)	977
Fsp4HI	GCNGC	6 cut(s)	96, 260, 427, 781, 1582, 1632
FspBI	CTAG	4 cut(s)	236, 1269, 1560, 1613
GlaI	GCGC	1 cut(s)	117
GluI	GCNGC	6 cut(s)	96, 260, 427, 781, 1582, 1632
GsaI	CCCAGC	3 cut(s)	31, 159, 584
HaeII	RGCGCY	1 cut(s)	119
HaeIII	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
HapII	CCGG	5 cut(s)	11, 110, 254, 275, 1278
HgaI	GACGC	2 cut(s)	1409, 1587
HhaI	GCGC	1 cut(s)	118
Hin1I	GRCGYC	1 cut(s)	1579
Hin1II	CATG	5 cut(s)	484, 526, 634, 1372, 1558
Hin6I	GCGC	1 cut(s)	116
HinP1I	GCGC	1 cut(s)	116
HincII	GTYRAC	2 cut(s)	411, 1308
HindII	GTYRAC	2 cut(s)	411, 1308
HinfI	GANTC	9 cut(s)	232, 295, 576, 827, 998, 1215, 1712, 1808, 1985
HpaII	CCGG	5 cut(s)	11, 110, 254, 275, 1278
HphI	GGTGA	3 cut(s)	25, 574, 992
Hpy166II	GTNNAC	3 cut(s)	411, 1308, 1918
Hpy188I	TCNGA	6 cut(s)	964, 1158, 1294, 1422, 1502, 1577
Hpy188III	TCNNGA	8 cut(s)	292, 821, 1053, 1148, 1189, 1369, 1613, 1835
Hpy8I	GTNNAC	3 cut(s)	411, 1308, 1918
HpyCH4III	ACNGT	7 cut(s)	873, 900, 941, 1010, 1202, 1512, 1781
HpyCH4IV	ACGT	4 cut(s)	185, 588, 1920, 1937
HpyF10VI	GCNNNNNNNGC	3 cut(s)	115, 152, 722
HpyF3I	CTNAG	3 cut(s)	829, 1421, 1458
HpySE526I	ACGT	4 cut(s)	185, 588, 1920, 1937
Hsp92I	GRCGYC	1 cut(s)	1579
Hsp92II	CATG	5 cut(s)	484, 526, 634, 1372, 1558
HspAI	GCGC	1 cut(s)	116
Ksp22I	TGATCA	1 cut(s)	1365
Kzo9I	GATC	5 cut(s)	442, 914, 1028, 1365, 1492
LguI	GCTCTTC	1 cut(s)	965
Lsp1109I	GCAGC	4 cut(s)	82, 413, 792, 1618
MaeI	CTAG	4 cut(s)	236, 1269, 1560, 1613
MaeII	ACGT	4 cut(s)	185, 588, 1920, 1937
MaeIII	GTNAC	2 cut(s)	980, 1763
MalI	GATC	5 cut(s)	444, 916, 1030, 1367, 1494
MboI	GATC	5 cut(s)	442, 914, 1028, 1365, 1492
MflI	RGATCY	3 cut(s)	442, 914, 1492
MhlI	GDGCHC	2 cut(s)	977, 1510
MlyI	GAGTC	3 cut(s)	304, 585, 821
MmeI	TCCRAC	2 cut(s)	262, 733
Mph1103I	ATGCAT	1 cut(s)	125
MroXI	GAANNNNTTC	2 cut(s)	705, 1620
MseI	TTAA	4 cut(s)	227, 639, 1128, 1661
MspA1I	CMGCKG	3 cut(s)	146, 584, 605
MspI	CCGG	5 cut(s)	11, 110, 254, 275, 1278
MspR9I	CCNGG	7 cut(s)	406, 440, 549, 839, 928, 1279, 1668
MvaI	CCWGG	6 cut(s)	406, 440, 549, 839, 928, 1668
MvnI	CGCG	1 cut(s)	1403
MwoI	GCNNNNNNNGC	3 cut(s)	115, 152, 722
NciI	CCSGG	1 cut(s)	1279
NcoI	CCATGG	1 cut(s)	522
NdeII	GATC	5 cut(s)	442, 914, 1028, 1365, 1492
NlaIII	CATG	5 cut(s)	484, 526, 634, 1372, 1558
NlaIV	GGNNCC	6 cut(s)	9, 258, 403, 684, 916, 1566
NmeAIII	GCCGAG	1 cut(s)	60
NmuCI	GTSAC	2 cut(s)	980, 1763
NsiI	ATGCAT	1 cut(s)	125
NspI	RCATGY	1 cut(s)	634
NspV	TTCGAA	1 cut(s)	1001
PagI	TCATGA	1 cut(s)	1368
PaqCI	CACCTGC	2 cut(s)	514, 1084
PciSI	GCTCTTC	1 cut(s)	965
PdmI	GAANNNNTTC	2 cut(s)	705, 1620
PfeI	GAWTC	6 cut(s)	232, 998, 1215, 1712, 1808, 1985
PflFI	GACNNNGTC	2 cut(s)	830, 1312
PflMI	CCANNNNNTGG	1 cut(s)	716
PfoI	TCCNGGA	2 cut(s)	438, 1666
PkrI	GCNGC	6 cut(s)	97, 261, 428, 782, 1583, 1633
PleI	GAGTC	3 cut(s)	303, 584, 821
PpsI	GAGTC	3 cut(s)	303, 584, 821
Ppu21I	YACGTR	1 cut(s)	1938
PshBI	ATTAAT	1 cut(s)	1128
PsiI	TTATAA	1 cut(s)	2037
Psp124BI	GAGCTC	1 cut(s)	977
Psp6I	CCWGG	6 cut(s)	404, 438, 547, 837, 926, 1666
PspFI	CCCAGC	3 cut(s)	27, 155, 580
PspGI	CCWGG	6 cut(s)	404, 438, 547, 837, 926, 1666
PspN4I	GGNNCC	6 cut(s)	9, 258, 403, 684, 916, 1566
PspPI	GGNCC	4 cut(s)	107, 683, 1322, 1355
PstI	CTGCAG	2 cut(s)	782, 1492
PstNI	CAGNNNCTG	1 cut(s)	1496
PsuI	RGATCY	3 cut(s)	442, 914, 1492
PsyI	GACNNNGTC	2 cut(s)	830, 1312
PvuII	CAGCTG	2 cut(s)	146, 605
RsaI	GTAC	2 cut(s)	188, 902
RsaNI	GTAC	2 cut(s)	187, 901
SacI	GAGCTC	1 cut(s)	977
SalI	GTCGAC	1 cut(s)	409
SapI	GCTCTTC	1 cut(s)	965
SaqAI	TTAA	4 cut(s)	227, 639, 1128, 1661
SatI	GCNGC	6 cut(s)	96, 260, 427, 781, 1582, 1632
Sau3AI	GATC	5 cut(s)	442, 914, 1028, 1365, 1492
Sau96I	GGNCC	4 cut(s)	107, 683, 1322, 1355
SchI	GAGTC	3 cut(s)	304, 585, 821
ScrFI	CCNGG	7 cut(s)	406, 440, 549, 839, 928, 1279, 1668
SduI	GDGCHC	2 cut(s)	977, 1510
SfcI	CTRYAG	3 cut(s)	778, 1488, 1535
SfuI	TTCGAA	1 cut(s)	1001
SinI	GGWCC	2 cut(s)	683, 1355
SmlI	CTYRAG	1 cut(s)	904
SmoI	CTYRAG	1 cut(s)	904
SnaBI	TACGTA	1 cut(s)	1938
SsiI	CCGC	4 cut(s)	260, 584, 835, 1582
SspI	AATATT	2 cut(s)	1659, 2032
SspMI	CTAG	4 cut(s)	236, 1269, 1560, 1613
SstI	GAGCTC	1 cut(s)	977
StyD4I	CCNGG	7 cut(s)	404, 438, 547, 837, 926, 1277, 1666
StyI	CCWWGG	2 cut(s)	522, 1325
TaaI	ACNGT	7 cut(s)	873, 900, 941, 1010, 1202, 1512, 1781
TaiI	ACGT	4 cut(s)	188, 591, 1923, 1940
TaqI	TCGA	5 cut(s)	410, 1001, 1235, 1341, 1988
TatI	WGTACW	1 cut(s)	900
TauI	GCSGC	2 cut(s)	262, 1584
TfiI	GAWTC	6 cut(s)	232, 998, 1215, 1712, 1808, 1985
Tru1I	TTAA	4 cut(s)	227, 639, 1128, 1661
Tru9I	TTAA	4 cut(s)	227, 639, 1128, 1661
TscAI	CASTG	5 cut(s)	392, 867, 876, 1095, 1480
TseFI	GTSAC	2 cut(s)	980, 1763
TseI	GCWGC	4 cut(s)	95, 426, 780, 1631
Tsp45I	GTSAC	2 cut(s)	980, 1763
TspGWI	ACGGA	3 cut(s)	1768, 1864, 1993
TspRI	CASTG	5 cut(s)	392, 867, 876, 1095, 1480
Tth111I	GACNNNGTC	2 cut(s)	830, 1312
Van91I	CCANNNNNTGG	1 cut(s)	716
VpaK11BI	GGWCC	2 cut(s)	683, 1355
VspI	ATTAAT	1 cut(s)	1128
XapI	RAATTY	7 cut(s)	16, 139, 1056, 1137, 1478, 1591, 1908
XbaI	TCTAGA	1 cut(s)	1612
XceI	RCATGY	1 cut(s)	634
XmiI	GTMKAC	1 cut(s)	410
XmnI	GAANNNNTTC	2 cut(s)	705, 1620
XspI	CTAG	4 cut(s)	236, 1269, 1560, 1613
Zsp2I	ATGCAT	1 cut(s)	125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.