Rh2BG578200

HEAT repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0002980
Physical Location & Seq
Reverse (-)
79527516 .. 79552705
25190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG578200.1

Sequence Viewer

Length: 5565 bp
ATGGCGAAGAAGCACGTCAAAGATAACCCCCTACCGCTTTCTCAGTTCGGCGTCTTGGTAGCTCAATTGGAGTCCATAGTCGCCTCCGCCGCCCAGAAGCCACCGGAGCCCCTCCTCTGCTTCGATCTCCTCTCCGATCTCATCTCCGCCATCGCCGAAGAGCCCAAGGAGTCGATTTTGTTATGGCAAAGGCGATGCGAGGAGGCACTTTATTCACTGCTTGTACTCGGAGCTCGGAGGCCGGTGCGGCATTTGGCTTCAGTTGCAATGGCGAGGGTTATATCCAAGGGAGATAGCATTTCAATATACTCCAGAGCCAGCAGTCTCCAAGGGTTTCTCTCTGATGGGAAGAAGAGCGACCCGCAAAAAGTAGCTGGAGCTGCTCAATGCTTAGGAGAATTGTATCGATATTTTGGGAGGCGAATCACTTCAGGTTTACTTGAAACGACTATGATTGCCACAAAACTCATCAAGTTTCATGAGGAATTTGTGAGACAAGAGGCTTTATATATGCTTCAAAATGCTTTGGAAGGGTCTGGTGGTAGTGCTGCTGCTTCAGCATACACGGAGGCATTTCGTCTCATCATGCGGTTTGCTGTTGGTGATAAATCATTTCTTGTCAGAATCGCTGCTGCAAGATGTTTGAAGGCATTTGCTATTATTGGAGGACCGGGTTTAGGGGTGGGAGAACTTGACAATTCAGCTTCTTTCTGTGTCAAGGCCCTTGAGGATCCTGTTTCATCTGTCCGTGATGCATTTGCTGAAGCATTGGGTTCGCTGCTTGCTCTTGGAATGAATCCTGATGCACAGGTTCAACCAAGAGGGAAGGGACCTTTTCCTCCAGCAAAGAAACTAGAAGGTGGTTTGCAAAGGCATTTAGCGTTGCCTTTCACAAAAGCAAGTGGCACTAGGTCAAAGGATGTGCGAGTTGGCATAACATTGTCTTGGGTGTTCTTCTTACAGGCAATTCGTTTGAAGTACTTGCATCCAGACAGTGAGCTTCAAAACTATGCAATTCAGGTTATGGACATGCTTCGTGCCGATACTTCTGTTGACGCCTATACTCTGGCTTGTGTTCTCTATATCCTTCGTGTTGGTGTTACCGATCAGATGACAGAACCTACTCAGAGGAGTTTTTTGGTTTTTCTTGGACAGCAGCTTATGTCTCCTGATGCCAGTCCTTCCATGAAAATTGCTGGTCTACGTACTGTCTCATATACCCTAAAAACTCTGGGAGAGGTTCCAGCTGAGTTCAAGGAAGTACTTGACAACACTGTTGTTGCAGCAGTATCTCATTCTTCTCAACTTGTACGGATTGAGGCTGCTTTGACATTGCGTGCACTGGCTGAGGTTGATCCCACCTGTGTTGGTGGTTTAATTTCATATGGGGTGACCATGTTGAATGCTCTGAGAGAAAATATATCGTTTGAAAAGGGGAGCACTTTGCAATTAGAGCTTGATTCTTTGCATGGGCAAGCTACTGTGTTAGCAACTCTGGTGTCCATTTCCCCAAAATTACCTCTTGGTTATCCCGCTAGGTTGCCCAAATCAGTTCTTGAAGTTTCAAAGAAAATGCTGACTGAATCTAGTCGGAATCCTCTGGCCGCTACAATTGAAAAAGAAGCTGGGTGGTTACTTTTGTCATCTCTCTTAGCATCCATGCCGAAGGAGGAGCTTGAAGACCAGGTTTTTGATATTCTTTCCTTGTGGGTGTCCCTTTTTACTGGAAACCCACAAAATGAAACTAACCAAACTGGGGATTTGATATCTAGGATTCGCATGTGGTCTGCTGCAATTGATGCACTTACGTCATTTTTAAGATGCTTTCTTTCCCATGATGCTAAGATTAATCGGATTTTGCTTCAACCTGTGCTTGTATACCTAAGTAGGGCTTTATCCTTTATATCACTGATAGCGGCCAAAGAACTGCCAAATGTGAAGCCTGCTCTGAATATATTTATTATCAGGACACTAATAGCTTATCAGTCTCTTCCTGATCCAATGGCATATAAGAATGAACACCCCCAAATTATTCAAATTTGCACTAGTCCATTCAGAGAGGCTTTTGGGTGTGAAGAAAGTTCATGCTTGAGGTTTCTGTTAGACAAAAGAGATGCATGGTTAGGTCCCTGGATCCCTGGAAGGGATTGGTTTGAAGATGAACTTCGTGCTTTTCAAGGTGGAAAAGATGGTATTATGCCCTGTGTCTGGGAGAACGAAGTTTCTAGCTTTCCTCAGCCGGAACCAGTAAACAAGATATTGGTGAACCAGATGCTTCTCTGCTTTGGAGTCATGTTTGCTTCTCAGGATAGTGGTGGGATGCTGTCACTTCTTGGAATGATTGAGCAATCTATGAAAGCTGGAAGAAAGCAACCATGGCATGCAGCTAGTGTAACCAATATATGTGTGGGGTTACTTTCGGGATTCAAGGCTTTGCTTTCCTTGCGTTCCCAGCCATTAGCAGTTGATGTATTAAATTCAGCACAGGCTATATTTCAGAGTATTCTAGCAGAGGGTGACATCTGTCCATCACAACGTAGGGCTGCATCAGAATGTCTTGGCCTTTTAGCTCGTCTTGGAAATGATATCTTTACAGCAAGAATGACAAGATCACTGCTTGGTGACCTAACTGGAGCAACAGATTCAAACTATGCAGGCTCAATTGCTTTTGCTCTGGGTTGCATTCATTGCAGTGCAGGAGGAATGGCATTGTCGACATTAGTGCCTTCAACTGTGAGCTCAATTTCTTTGCTTGCTAAAAGTTCAATAGCTGGTTTACAGATCTGGTCTTTACATGGACTTCTGTTAACCATAGAAGCTGCTGGCTTGTCCTATGTATCTCAAGTTCAGGCAACACTTGGCCTTGCTTTGGATATTCTTTTGTCTGAGGAGAATGGTTGGGTTGTACTTCAGCAAGGGGTTGGCCGTCTTATAAATGCTATTGTAGCTGTTCTTGGTCCTGAACTTGCCCCTGGAAGTATTTTCTTTTCACGTTGCAAGTCAGTTGTTTCAGAGATAAGCTCAGGCCAAGAAACAGCAACAATGCTCGAGAGTGTTCGCTTTACTCAACAACTTGTACTATTTGCACCACAAGCCGTTTCTGTGCACACCCATGTCCAAACTCTTCTTCCTACTTTGTCCTCAAGACAGCCAGTTTTGAGGCATCTTGCTGTTTCCACTCTTCGGCATCTTATTGAGAAAGATCCAGTGTCCGTTGTTAACGAGCAAATAGAAGATAAACTATTTCAAATGCTGGATGAAGAAACTGATTCCGAGATTGGTGATCTGGTGCGGGCCACAATTATGCGATTGCTCTATGCATCAAGCCCTTCACATCCATCTCATTGGATGTCAATATGTCGTAGTGTGGTTCTTTCCACATCAATGAGGAGAAATGCTGATAGTACAAACGGTTTAGAAAATGATCCGGTGGGTACAGAGGGTGATCCAAGTTTAAATTCTGGAGAAGATGATGATAACATGGTTTCTGGATCTAGAAGCTCTCCCCAGTTGATTCTCAGCAGGGAAAAGCACCTCAGATACCGAACCAGAGTGTTTGCTGCTGAGTGTTTGAGTTACCTACCTGGAGCTGTTGGAAAGAATCCAGCTCATTTTGATCTCTGTTTGGCTAGGGACCAATCTACTAATGGACGGGCCTCTGGTGATTGGCTTGTCCTCCATATCCAAGAGCTTATAGCACTTGCTTATCAGATAAGCACGATCCAGTTTGAAAACATGCAGCCAATTGGTGTAGTACTTCTGAGTACGATTACAGACAAGTTCGAGAGGACTCCTGACCCGGAGCTTCCAGGGCACCTCCTGCTGGAACAATATCAGGCGCAGCTAGTGTCTGCTGTCCGCACTGCCTTAGACTCGTCCTCTGGTCCTATTCTTTTGGAAGCAGGCTTCCAGTTGGCTACAAAGATATTCACAAGTGGAATAATTAAGGGTGATCAGATTGCTGTTAAGCGCATATATTCTTTGATTTTGCGACCATTGAATGACTTCAAGGACCTGTATTATCCTTCATTTGCAGAATGGGTCTCGTGCAAGATTAAGATAAGACTTCTTGCTGCCCATGCTTCTCTCAAATGTTATACATATGCATTCTTGAGGAGACACCAAAGTGCGGTTCCAGATGAATATTTAGCACTTTTACCATTATTTTCAAAGAGTTCAAACATGCTTGGGAAGTACTGGATTAGAGTCTTGAAGGACTACAGCTATATTTGCTTGTGCGTGCATCTTAAGGCAAAGTGGAATCCTTTTCTTGATGGAATTCAATCACCTCTGGTATCATCAAAGTTGGAGCCCTGCTTGGAAGAATCATGGCCAGTAATATTGCAGGCAATTGCATTGGATGCAGTTCCAGTGAATCTTGAAGAGAATGAATCTTCAAAATCCACTGATGAAACTACATCAAGTAATAGCTTATTGTCTGGATATAGTATGGTTCAATTGGAATCCGAAGATTATCAGTTTCTCTGGGGATTTGCTTTGCTAGTTTTATTTCAGGGGCAAAATTCGACCCCCAGTGGATTGAAAAATCCAGTTTCTTTTGTTAAAGCTTATAACAGGGTTGATCCATCCAGTGAAGAATTATCTTCCCCAGGAGTTAATTTATATGAGATTGTATTACCGGTCTTCCAGTTTTTGTCCACCAAAAGATTTGCCAGTGCAGGATTTCTCACTATGGACATATGCAGTGAATTGCTTCAGGTTTTCTCATATTCTATGTGCATGGATAATTCATGGGATACTCTTTCAGTGTCTGTTCTATCACAGATTGTGAAGAACTGCCCTGAAACATTTTATGAACCGGAAAACTTTGCTTATCTGGCAATGGAACTCTGTTTGGCATACCTCTGCAAAGTGTTTCTAAGTACCGACGTGACATCTCTGGACAAATCCTTGGAGGATTTGATATCCTCAATATTTGTCACAGCAAAAACCCTTGTGAACTGTTTTCAACCAAAGAAGCAACTAGTATCTGCGGCATTGGCGTTTGTTTTAATTGGTTACAAGGGAATCAGAGAAGTCTCAACTGACTTCTGCTTCTCCAAACTTGATGAATATTTCAAGTGCACGAGTCTCTTATTGAAAAGATTTATTGATGATACATGCAGTGTTGGTGATGATGGTATTCTTCAGATGAGAAAAATATTGGGAACTTGTCTGAATGTGATCACTGGTTTAACCAAGGACTGCATTGAGTGTATTCATATGCTGGAGAATAAGAGATCTGATTCACATACATTACTGCAAACAAAGCTTGCTTTCTCTCTTGAACAAACTATATCATTTGCCAAGCTGGGTTATGAAATGGATTATCTTGAAGATAATACAGATGGTGATTCAATTTATTATGGTATGTTTAAATATTGCACCAGACGTGTCCAAACTGTACTCACCGATTCAAGTTTACAGGTATGTCCTTGTGCATGTATCCCATTATGGTCACTTATACCGAGCATGTGGCAACTGATGATTTTGTTCACAGGTTCAAGAAATTGGGTTGCAAGTACTAAAAAACTTGATTCAGAAAGGCACAGATGCAGAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1854

Amino Acids

204.03

Weight (kDa)

5.93

Isoelectric Point (pI)

45.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Laa1_Sip1_HTR5 PF20210 1223 - 1408 3.7e-43 Laa1/Sip1/HEATR5 HEAT repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2933, 4572
AccB1I GGYRCC 1 cut(s) 3813
AccI GTMKAC 3 cut(s) 1201, 1878, 2714
AcoI YGGCCR 4 cut(s) 1602, 1917, 2923, 4331
AcsI RAATTY 6 cut(s) 485, 2037, 2476, 3457, 4278, 4522
AcuI CTGAAG 7 cut(s) 243, 414, 540, 783, 2894, 4700, 5132
AcyI GRCGYC 2 cut(s) 51, 1056
AfiI CCNNNNNNNGG 9 cut(s) 677, 1756, 1888, 2143, 2208, 2869, 3183, 3823, 4129
AflII CTTAAG 1 cut(s) 4247
AflIII ACRYGT 1 cut(s) 5392
AgeI ACCGGT 1 cut(s) 4639
AhlI ACTAGT 2 cut(s) 2045, 4984
AjiI CACGTC 3 cut(s) 16, 4891, 5393
AjnI CCWGG 7 cut(s) 1683, 2129, 2137, 2971, 3583, 3808, 4609
AjuI GAANNNNNNNTTGG 6 cut(s) 3111, 3143, 3442, 3474, 4116, 4148
AleI CACNNNNGTG 1 cut(s) 4125
Alw21I GWGCWC 6 cut(s) 235, 1342, 1442, 2741, 3108, 5087
Alw44I GTGCAC 3 cut(s) 1338, 3104, 5083
AlwNI CAGNNNCTG 1 cut(s) 4772
Ama87I CYCGRG 1 cut(s) 3047
ApaLI GTGCAC 3 cut(s) 1338, 3104, 5083
ApoI RAATTY 6 cut(s) 485, 2037, 2476, 3457, 4278, 4522
ArsI GACNNNNNNTTYG 2 cut(s) 1673, 1705
AseI ATTAAT 1 cut(s) 1848
AsiGI ACCGGT 1 cut(s) 4639
Asp700I GAANNNNTTC 3 cut(s) 427, 4004, 4713
AspLEI GCGC 2 cut(s) 3841, 3972
AsuC2I CCSGG 2 cut(s) 672, 3800
AvaI CYCGRG 1 cut(s) 3047
AvaII GGWCC 7 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012
BaeGI GKGCMC 4 cut(s) 1342, 3108, 3816, 5087
BaeI ACNNNNGTAYC 2 cut(s) 1035, 1068
BalI TGGCCA 1 cut(s) 4333
BamHI GGATCC 2 cut(s) 730, 2133
BanI GGYRCC 1 cut(s) 3813
BanII GRGCYC 5 cut(s) 111, 165, 235, 2741, 4314
BauI CACGAG 2 cut(s) 4045, 5086
BbsI GAAGAC 2 cut(s) 1686, 4636
Bbv12I GWGCWC 6 cut(s) 235, 1342, 1442, 2741, 3108, 5087
BbvCI CCTCAGC 2 cut(s) 1347, 2235
BccI CCATC 9 cut(s) 158, 338, 2183, 2536, 3346, 4268, 4594, 5132, 5342
BceAI ACGGC 2 cut(s) 2910, 3080
BcgI CGANNNNNNTGC 4 cut(s) 756, 790, 2704, 2738
BciT130I CCWGG 7 cut(s) 1685, 2131, 2139, 2973, 3585, 3810, 4611
BciVI GTATCC 2 cut(s) 4750, 5456
BclI TGATCA 2 cut(s) 3952, 5184
BcnI CCSGG 2 cut(s) 672, 3800
BcuI ACTAGT 2 cut(s) 2045, 4984
BfmI CTRYAG 1 cut(s) 4219
BfrI CTTAAG 1 cut(s) 4247
BfuI GTATCC 2 cut(s) 4750, 5456
BglI GCCNNNNNGGC 1 cut(s) 247
BglII AGATCT 2 cut(s) 2781, 5240
BmcAI AGTACT 5 cut(s) 980, 1263, 3756, 4196, 5524
Bme1390I CCNGG 9 cut(s) 672, 1685, 2131, 2139, 2973, 3585, 3800, 3810, 4611
Bme18I GGWCC 7 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012
BmeT110I CYCGRG 1 cut(s) 3047
BmgBI CACGTC 3 cut(s) 16, 4891, 5393
BmrFI CCNGG 9 cut(s) 672, 1685, 2131, 2139, 2973, 3585, 3800, 3810, 4611
BmrI ACTGGG 3 cut(s) 1764, 3502, 4527
BmuI ACTGGG 3 cut(s) 1764, 3502, 4527
BoxI GACNNNNGTC 1 cut(s) 2523
BpiI GAAGAC 2 cut(s) 1686, 4636
BplI GAGNNNNNCTC 2 cut(s) 3005, 3037
BpmI CTGGAG 7 cut(s) 295, 396, 825, 2652, 3483, 3606, 5249
Bpu10I CCTNAGC 4 cut(s) 391, 1347, 2235, 3022
BpuEI CTTGAG 5 cut(s) 746, 2110, 2826, 3127, 4132
BpuMI CCSGG 2 cut(s) 672, 3800
Bsa29I ATCGAT 1 cut(s) 406
BsaAI YACGTR 1 cut(s) 1205
BsaHI GRCGYC 2 cut(s) 51, 1056
BsaI GGTCTC 1 cut(s) 4048
BsaWI WCCGGW 4 cut(s) 103, 3427, 4639, 4819
Bsc4I CCNNNNNNNGG 9 cut(s) 677, 1756, 1888, 2143, 2208, 2869, 3183, 3823, 4129
Bse118I RCCGGY 2 cut(s) 241, 4639
Bse3DI GCAATG 4 cut(s) 273, 1331, 2686, 4848
BseBI CCWGG 7 cut(s) 1685, 2131, 2139, 2973, 3585, 3810, 4611
BseCI ATCGAT 1 cut(s) 406
BseGI GGATG 9 cut(s) 925, 985, 1655, 2325, 3262, 3334, 3354, 4366, 4586
BseLI CCNNNNNNNGG 9 cut(s) 677, 1756, 1888, 2143, 2208, 2869, 3183, 3823, 4129
BseMI GCAATG 4 cut(s) 273, 1331, 2686, 4848
BseRI GAGGAG 8 cut(s) 104, 119, 215, 1144, 1685, 2903, 3403, 4129
BseSI GKGCMC 4 cut(s) 1342, 3108, 3816, 5087
BseYI CCCAGC 3 cut(s) 1625, 2451, 5311
BsgI GTGCAG 2 cut(s) 2715, 4698
BshNI GGYRCC 1 cut(s) 3813
BshTI ACCGGT 1 cut(s) 4639
BshVI ATCGAT 1 cut(s) 406
BsiHKAI GWGCWC 6 cut(s) 235, 1342, 1442, 2741, 3108, 5087
BsiHKCI CYCGRG 1 cut(s) 3047
BsiSI CCGG 8 cut(s) 104, 242, 671, 2240, 3428, 3800, 4640, 4820
BslFI GGGAC 4 cut(s) 843, 1699, 2112, 3647
BslI CCNNNNNNNGG 9 cut(s) 677, 1756, 1888, 2143, 2208, 2869, 3183, 3823, 4129
BsmBI CGTCTC 1 cut(s) 584
BsmFI GGGAC 4 cut(s) 843, 1699, 2112, 3647
BsmI GAATGC 3 cut(s) 1408, 2682, 4106
Bso31I GGTCTC 1 cut(s) 4048
BsoBI CYCGRG 1 cut(s) 3047
Bsp19I CCATGG 1 cut(s) 2375
BspDI ATCGAT 1 cut(s) 406
BspHI TCATGA 1 cut(s) 478
BspQI GCTCTTC 2 cut(s) 153, 347
BspT107I GGYRCC 1 cut(s) 3813
BspTI CTTAAG 1 cut(s) 4247
BspTNI GGTCTC 1 cut(s) 4048
BsrDI GCAATG 4 cut(s) 273, 1331, 2686, 4848
BsrFI RCCGGY 2 cut(s) 241, 4639
BssAI RCCGGY 2 cut(s) 241, 4639
BssNAI GTATAC 1 cut(s) 1879
BssNI GRCGYC 2 cut(s) 51, 1056
BssSI CACGAG 2 cut(s) 4045, 5086
BssT1I CCWWGG 6 cut(s) 165, 285, 328, 2375, 4911, 5199
Bst1107I GTATAC 1 cut(s) 1879
Bst2BI CACGAG 2 cut(s) 4045, 5086
Bst2UI CCWGG 7 cut(s) 1685, 2131, 2139, 2973, 3585, 3810, 4611
Bst4CI ACNGT 8 cut(s) 995, 1210, 1276, 1483, 2734, 3413, 4964, 5404
Bst6I CTCTTC 6 cut(s) 153, 347, 1995, 3129, 3186, 4377
BstACI GRCGYC 2 cut(s) 51, 1056
BstAFI CTTAAG 1 cut(s) 4247
BstAPI GCANNNNNTGC 4 cut(s) 1799, 2688, 3820, 4361
BstBAI YACGTR 1 cut(s) 1205
BstDSI CCRYGG 1 cut(s) 2375
BstEII GGTNACC 2 cut(s) 1390, 2621
BstF5I GGATG 9 cut(s) 925, 985, 1655, 2325, 3262, 3334, 3354, 4366, 4586
BstHHI GCGC 2 cut(s) 3841, 3972
BstNI CCWGG 7 cut(s) 1685, 2131, 2139, 2973, 3585, 3810, 4611
BstNSI RCATGY 8 cut(s) 1033, 1783, 2384, 3739, 4186, 5124, 5445, 5476
BstPAI GACNNNNGTC 1 cut(s) 2523
BstPI GGTNACC 2 cut(s) 1390, 2621
BstSCI CCNGG 9 cut(s) 670, 1683, 2129, 2137, 2971, 3583, 3798, 3808, 4609
BstSFI CTRYAG 1 cut(s) 4219
BstSLI GKGCMC 4 cut(s) 1342, 3108, 3816, 5087
BstSNI TACGTA 1 cut(s) 1205
BstV2I GAAGAC 2 cut(s) 1686, 4636
BstX2I RGATCY 6 cut(s) 730, 2133, 2781, 3202, 3491, 5240
BstXI CCANNNNNNTGG 1 cut(s) 3345
BstYI RGATCY 6 cut(s) 730, 2133, 2781, 3202, 3491, 5240
BstZ17I GTATAC 1 cut(s) 1879
Bsu15I ATCGAT 1 cut(s) 406
BsuI GTATCC 2 cut(s) 4750, 5456
BsuTUI ATCGAT 1 cut(s) 406
BtgI CCRYGG 1 cut(s) 2375
BtgZI GCGATG 2 cut(s) 136, 208
BtrI CACGTC 3 cut(s) 16, 4891, 5393
BtsCI GGATG 9 cut(s) 925, 985, 1655, 2325, 3262, 3334, 3354, 4366, 4586
BtsI GCAGTG 6 cut(s) 215, 2612, 2698, 3861, 4711, 5131
CaiI CAGNNNCTG 1 cut(s) 4772
CciI TCATGA 1 cut(s) 478
CfoI GCGC 2 cut(s) 3841, 3972
Cfr10I RCCGGY 2 cut(s) 241, 4639
ClaI ATCGAT 1 cut(s) 406
CseI GACGC 2 cut(s) 40, 1064
CsiI ACCWGGT 1 cut(s) 1683
CspAI ACCGGT 1 cut(s) 4639
CspCI CAANNNNNGTGG 2 cut(s) 1348, 1383
DraI TTTAAA 2 cut(s) 3456, 5377
EaeI YGGCCR 4 cut(s) 1602, 1917, 2923, 4331
Eam1104I CTCTTC 6 cut(s) 153, 347, 1995, 3129, 3186, 4377
EarI CTCTTC 6 cut(s) 153, 347, 1995, 3129, 3186, 4377
EciI GGCGGA 2 cut(s) 76, 136
Ecl136II GAGCTC 2 cut(s) 233, 2739
Eco105I TACGTA 1 cut(s) 1205
Eco130I CCWWGG 6 cut(s) 165, 285, 328, 2375, 4911, 5199
Eco24I GRGCYC 5 cut(s) 111, 165, 235, 2741, 4314
Eco31I GGTCTC 1 cut(s) 4048
Eco32I GATATC 3 cut(s) 1767, 2587, 4926
Eco47I GGWCC 7 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012
Eco53kI GAGCTC 2 cut(s) 233, 2739
Eco57I CTGAAG 7 cut(s) 243, 414, 540, 783, 2894, 4700, 5132
Eco88I CYCGRG 1 cut(s) 3047
Eco91I GGTNACC 2 cut(s) 1390, 2621
EcoICRI GAGCTC 2 cut(s) 233, 2739
EcoO109I RGGNCCY 4 cut(s) 721, 830, 2126, 4012
EcoO65I GGTNACC 2 cut(s) 1390, 2621
EcoRI GAATTC 1 cut(s) 4278
EcoRII CCWGG 7 cut(s) 1683, 2129, 2137, 2971, 3583, 3808, 4609
EcoRV GATATC 3 cut(s) 1767, 2587, 4926
EcoT14I CCWWGG 6 cut(s) 165, 285, 328, 2375, 4911, 5199
EcoT22I ATGCAT 4 cut(s) 757, 2119, 3322, 4108
EcoT38I GRGCYC 5 cut(s) 111, 165, 235, 2741, 4314
ErhI CCWWGG 6 cut(s) 165, 285, 328, 2375, 4911, 5199
Esp3I CGTCTC 1 cut(s) 584
FalI AAGNNNNNCTT 4 cut(s) 1876, 1908, 2148, 2180
FaqI GGGAC 4 cut(s) 843, 1699, 2112, 3647
FauI CCCGC 3 cut(s) 369, 1540, 3285
FauNDI CATATG 4 cut(s) 1384, 4102, 4700, 5223
FbaI TGATCA 2 cut(s) 3952, 5184
FblI GTMKAC 3 cut(s) 1201, 1878, 2714
FokI GGATG 9 cut(s) 932, 972, 1642, 2332, 3269, 3321, 3361, 4373, 4573
FriOI GRGCYC 5 cut(s) 111, 165, 235, 2741, 4314
GlaI GCGC 2 cut(s) 3840, 3971
GsaI CCCAGC 3 cut(s) 1629, 2455, 5315
GsuI CTGGAG 7 cut(s) 295, 396, 825, 2652, 3483, 3606, 5249
HapII CCGG 8 cut(s) 104, 242, 671, 2240, 3428, 3800, 4640, 4820
HgaI GACGC 2 cut(s) 40, 1064
HhaI GCGC 2 cut(s) 3841, 3972
Hin1I GRCGYC 2 cut(s) 51, 1056
Hin6I GCGC 2 cut(s) 3839, 3970
HinP1I GCGC 2 cut(s) 3839, 3970
HincII GTYRAC 4 cut(s) 1054, 2715, 2808, 3220
HindII GTYRAC 4 cut(s) 1054, 2715, 2808, 3220
HindIII AAGCTT 2 cut(s) 4566, 5270
HpaI GTTAAC 2 cut(s) 2808, 3220
HpaII CCGG 8 cut(s) 104, 242, 671, 2240, 3428, 3800, 4640, 4820
Hpy99I CGWCG 1 cut(s) 4892
HpyCH4III ACNGT 8 cut(s) 995, 1210, 1276, 1483, 2734, 3413, 4964, 5404
HpyCH4IV ACGT 7 cut(s) 15, 1204, 1808, 2536, 2992, 4890, 5392
HpySE526I ACGT 7 cut(s) 15, 1204, 1808, 2536, 2992, 4890, 5392
Hsp92I GRCGYC 2 cut(s) 51, 1056
HspAI GCGC 2 cut(s) 3839, 3970
Ksp22I TGATCA 2 cut(s) 3952, 5184
KspAI GTTAAC 2 cut(s) 2808, 3220
LguI GCTCTTC 2 cut(s) 153, 347
LmnI GCTCC 9 cut(s) 106, 230, 377, 1437, 1672, 2633, 3587, 3802, 4309
MabI ACCWGGT 1 cut(s) 1683
MaeII ACGT 7 cut(s) 15, 1204, 1808, 2536, 2992, 4890, 5392
MfeI CAATTG 7 cut(s) 65, 1611, 1794, 2661, 3744, 4350, 4457
MflI RGATCY 6 cut(s) 730, 2133, 2781, 3202, 3491, 5240
MlsI TGGCCA 1 cut(s) 4333
MluNI TGGCCA 1 cut(s) 4333
MlyI GAGTC 7 cut(s) 80, 179, 2298, 3784, 3866, 4215, 5098
MmeI TCCRAC 3 cut(s) 1571, 3574, 4287
Mox20I TGGCCA 1 cut(s) 4333
Mph1103I ATGCAT 4 cut(s) 757, 2119, 3322, 4108
MroXI GAANNNNTTC 3 cut(s) 427, 4004, 4713
MscI TGGCCA 1 cut(s) 4333
MslI CAYNNNNRTG 6 cut(s) 2551, 2691, 3111, 3302, 3383, 4125
Msp20I TGGCCA 1 cut(s) 4333
MspA1I CMGCKG 1 cut(s) 1247
MspCI CTTAAG 1 cut(s) 4247
MspI CCGG 8 cut(s) 104, 242, 671, 2240, 3428, 3800, 4640, 4820
MspR9I CCNGG 9 cut(s) 672, 1685, 2131, 2139, 2973, 3585, 3800, 3810, 4611
MunI CAATTG 7 cut(s) 65, 1611, 1794, 2661, 3744, 4350, 4457
Mva1269I GAATGC 3 cut(s) 1408, 2682, 4106
MvaI CCWGG 7 cut(s) 1685, 2131, 2139, 2973, 3585, 3810, 4611
NciI CCSGG 2 cut(s) 672, 3800
NcoI CCATGG 1 cut(s) 2375
NdeI CATATG 4 cut(s) 1384, 4102, 4700, 5223
NmuCI GTSAC 7 cut(s) 1390, 2325, 2516, 2621, 4891, 4939, 5457
NsiI ATGCAT 4 cut(s) 757, 2119, 3322, 4108
NspI RCATGY 8 cut(s) 1033, 1783, 2384, 3739, 4186, 5124, 5445, 5476
OliI CACNNNNGTG 1 cut(s) 4125
PaeI GCATGC 1 cut(s) 2384
PaeR7I CTCGAG 1 cut(s) 3047
PagI TCATGA 1 cut(s) 478
PciSI GCTCTTC 2 cut(s) 153, 347
PctI GAATGC 3 cut(s) 1408, 2682, 4106
PdmI GAANNNNTTC 3 cut(s) 427, 4004, 4713
PinAI ACCGGT 1 cut(s) 4639
PleI GAGTC 7 cut(s) 79, 178, 2297, 3784, 3866, 4214, 5097
PpsI GAGTC 7 cut(s) 79, 178, 2297, 3784, 3866, 4214, 5097
Ppu21I YACGTR 1 cut(s) 1205
PpuMI RGGWCCY 3 cut(s) 830, 2126, 4012
PshAI GACNNNNGTC 1 cut(s) 2523
PshBI ATTAAT 1 cut(s) 1848
PsiI TTATAA 2 cut(s) 2933, 4572
Psp124BI GAGCTC 2 cut(s) 235, 2741
Psp5II RGGWCCY 3 cut(s) 830, 2126, 4012
Psp6I CCWGG 7 cut(s) 1683, 2129, 2137, 2971, 3583, 3808, 4609
PspEI GGTNACC 2 cut(s) 1390, 2621
PspFI CCCAGC 3 cut(s) 1625, 2451, 5311
PspGI CCWGG 7 cut(s) 1683, 2129, 2137, 2971, 3583, 3808, 4609
PspPPI RGGWCCY 3 cut(s) 830, 2126, 4012
PsrI GAACNNNNNNTAC 2 cut(s) 2829, 2861
PstNI CAGNNNCTG 1 cut(s) 4772
PsuI RGATCY 6 cut(s) 730, 2133, 2781, 3202, 3491, 5240
PvuII CAGCTG 1 cut(s) 1247
RseI CAYNNNNRTG 6 cut(s) 2551, 2691, 3111, 3302, 3383, 4125
SacI GAGCTC 2 cut(s) 235, 2741
SalI GTCGAC 1 cut(s) 2713
SapI GCTCTTC 2 cut(s) 153, 347
ScaI AGTACT 5 cut(s) 980, 1263, 3756, 4196, 5524
SchI GAGTC 7 cut(s) 80, 179, 2298, 3784, 3866, 4215, 5098
ScrFI CCNGG 9 cut(s) 672, 1685, 2131, 2139, 2973, 3585, 3800, 3810, 4611
SexAI ACCWGGT 1 cut(s) 1683
SfcI CTRYAG 1 cut(s) 4219
Sfr274I CTCGAG 1 cut(s) 3047
SinI GGWCC 7 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012
SlaI CTCGAG 1 cut(s) 3047
SmiMI CAYNNNNRTG 6 cut(s) 2551, 2691, 3111, 3302, 3383, 4125
SmlI CTYRAG 7 cut(s) 725, 2089, 2841, 3047, 3142, 4111, 4247
SmoI CTYRAG 7 cut(s) 725, 2089, 2841, 3047, 3142, 4111, 4247
SnaBI TACGTA 1 cut(s) 1205
SpeI ACTAGT 2 cut(s) 2045, 4984
SphI GCATGC 1 cut(s) 2384
SspI AATATT 6 cut(s) 4145, 4341, 4935, 5075, 5163, 5381
SstI GAGCTC 2 cut(s) 235, 2741
StyD4I CCNGG 9 cut(s) 670, 1683, 2129, 2137, 2971, 3583, 3798, 3808, 4609
StyI CCWWGG 6 cut(s) 165, 285, 328, 2375, 4911, 5199
TaaI ACNGT 8 cut(s) 995, 1210, 1276, 1483, 2734, 3413, 4964, 5404
TaiI ACGT 7 cut(s) 18, 1207, 1811, 2539, 2995, 4893, 5395
TaqI TCGA 7 cut(s) 123, 173, 406, 2714, 3048, 3783, 4526
TauI GCSGC 5 cut(s) 92, 250, 1607, 1919, 4997
TseFI GTSAC 7 cut(s) 1390, 2325, 2516, 2621, 4891, 4939, 5457
Tsp45I GTSAC 7 cut(s) 1390, 2325, 2516, 2621, 4891, 4939, 5457
TspGWI ACGGA 4 cut(s) 581, 737, 1327, 3202
Vha464I CTTAAG 1 cut(s) 4247
VneI GTGCAC 3 cut(s) 1338, 3104, 5083
VpaK11BI GGWCC 7 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012
VspI ATTAAT 1 cut(s) 1848
XapI RAATTY 6 cut(s) 485, 2037, 2476, 3457, 4278, 4522
XbaI TCTAGA 1 cut(s) 3494
XceI RCATGY 8 cut(s) 1033, 1783, 2384, 3739, 4186, 5124, 5445, 5476
XcmI CCANNNNNNNNNTGG 2 cut(s) 2404, 3644
XhoI CTCGAG 1 cut(s) 3047
XmiI GTMKAC 3 cut(s) 1201, 1878, 2714
XmnI GAANNNNTTC 3 cut(s) 427, 4004, 4713
ZrmI AGTACT 5 cut(s) 980, 1263, 3756, 4196, 5524
Zsp2I ATGCAT 4 cut(s) 757, 2119, 3322, 4108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.