HEAT repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67140 AT1G67140 AT1G67140 |
| fragaria_vesca | FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 FvH4_6g45230 |
| malus_domestica | MD12G1002400.v1.1 MD14G1001900.v1.1 |
| prunus_persica | Prupe.7G002300_v2.0.a1 Prupe.7G002300_v2.0.a1 Prupe.7G002300_v2.0.a1 Prupe.7G002300_v2.0.a1 |
| pyrus_communis | pycom12g00210 pycom49g00150 pycom49g00160 |
| rosa_chinensis | RchiOBHm_Chr2g0162941 RchiOBHm_Chr2g0166391 |
| rosa_laevigata | RLG00000021363 |
| rosa_multiflora | Rmu_co8336279.1_g000001 Rmu_co8361777.1_g000001 Rmu_co8457597.1_g000001 Rmu_sc0000587.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00087690 |
| rosa_rugosa | Rorug02G0499400 |
| rosa_samantha | Rh2AG565500 Rh2AG588800 Rh2BG578200 Rh2CG547900 Rh2DG588400 Rh2DG611100 |
| rosa_wichuraiana | Rw2G046810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 2711, 3680, 5262 |
| AatII | GACGTC | 1 cut(s) | 5583 |
| AccB1I | GGYRCC | 1 cut(s) | 4503 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 156 |
| AccBSI | CCGCTC | 1 cut(s) | 895 |
| AccI | GTMKAC | 3 cut(s) | 1948, 2625, 6804 |
| AccII | CGCG | 2 cut(s) | 163, 4681 |
| AccIII | TCCGGA | 1 cut(s) | 7112 |
| AcoI | YGGCCR | 5 cut(s) | 189, 986, 2349, 3670, 5021 |
| AcuI | CTGAAG | 9 cut(s) | 990, 1161, 1287, 1530, 3641, 5390, 5822, 6381, 7215 |
| AcyI | GRCGYC | 3 cut(s) | 909, 1803, 5580 |
| AflII | CTTAAG | 1 cut(s) | 4937 |
| AgeI | ACCGGT | 1 cut(s) | 5329 |
| AhlI | ACTAGT | 2 cut(s) | 2792, 5674 |
| AjiI | CACGTC | 2 cut(s) | 874, 4025 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 3858, 3890, 4132, 4164, 4806, 4838 |
| AleI | CACNNNNGTG | 1 cut(s) | 4815 |
| Alw21I | GWGCWC | 4 cut(s) | 982, 2189, 3488, 3855 |
| Alw44I | GTGCAC | 1 cut(s) | 3851 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 5462, 6278 |
| Ama87I | CYCGRG | 3 cut(s) | 451, 3794, 6796 |
| Aor13HI | TCCGGA | 1 cut(s) | 7112 |
| ApaI | GGGCCC | 1 cut(s) | 4348 |
| ApaLI | GTGCAC | 1 cut(s) | 3851 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2420, 2452 |
| AsiGI | ACCGGT | 1 cut(s) | 5329 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1174, 4694, 5403, 6375, 7213 |
| AspLEI | GCGC | 6 cut(s) | 163, 1655, 2089, 4531, 4662, 5775 |
| AsuC2I | CCSGG | 5 cut(s) | 203, 511, 1419, 4490, 6977 |
| AvaI | CYCGRG | 3 cut(s) | 451, 3794, 6796 |
| AvaII | GGWCC | 7 cut(s) | 1415, 1577, 2873, 3704, 4574, 4702, 7115 |
| BaeGI | GKGCMC | 3 cut(s) | 3855, 4348, 4506 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1782, 1815 |
| BalI | TGGCCA | 1 cut(s) | 5023 |
| BamHI | GGATCC | 1 cut(s) | 1477 |
| BanI | GGYRCC | 1 cut(s) | 4503 |
| BanII | GRGCYC | 3 cut(s) | 982, 3488, 4348 |
| BauI | CACGAG | 3 cut(s) | 4735, 5776, 6380 |
| BbsI | GAAGAC | 1 cut(s) | 2433 |
| Bbv12I | GWGCWC | 4 cut(s) | 982, 2189, 3488, 3855 |
| BbvCI | CCTCAGC | 5 cut(s) | 275, 2094, 2982, 6481, 6957 |
| BceAI | ACGGC | 2 cut(s) | 667, 3657 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1503, 1537 |
| BciVI | GTATCC | 2 cut(s) | 62, 5440 |
| BclI | TGATCA | 3 cut(s) | 4642, 5874, 6871 |
| BcnI | CCSGG | 5 cut(s) | 203, 511, 1419, 4490, 6977 |
| BcuI | ACTAGT | 2 cut(s) | 2792, 5674 |
| BfmI | CTRYAG | 2 cut(s) | 114, 4909 |
| BfoI | RGCGCY | 1 cut(s) | 1656 |
| BfrI | CTTAAG | 1 cut(s) | 4937 |
| BfuI | GTATCC | 2 cut(s) | 62, 5440 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 994 |
| BglII | AGATCT | 2 cut(s) | 3528, 5930 |
| BmcAI | AGTACT | 5 cut(s) | 1727, 2010, 4446, 4886, 6141 |
| Bme18I | GGWCC | 7 cut(s) | 1415, 1577, 2873, 3704, 4574, 4702, 7115 |
| BmeT110I | CYCGRG | 3 cut(s) | 451, 3794, 6796 |
| BmgBI | CACGTC | 2 cut(s) | 874, 4025 |
| BmrI | ACTGGG | 3 cut(s) | 2511, 4192, 5217 |
| BmuI | ACTGGG | 3 cut(s) | 2511, 4192, 5217 |
| BoxI | GACNNNNGTC | 2 cut(s) | 3270, 3898 |
| BpiI | GAAGAC | 1 cut(s) | 2433 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3752, 3784 |
| BpmI | CTGGAG | 7 cut(s) | 1042, 1143, 1572, 3399, 4173, 4296, 5939 |
| Bpu10I | CCTNAGC | 8 cut(s) | 275, 721, 1138, 2094, 2982, 3769, 6481, 6957 |
| BpuEI | CTTGAG | 6 cut(s) | 1493, 2857, 3573, 3874, 4822, 6453 |
| BpuMI | CCSGG | 5 cut(s) | 203, 511, 1419, 4490, 6977 |
| Bsa29I | ATCGAT | 1 cut(s) | 1153 |
| BsaAI | YACGTR | 3 cut(s) | 596, 1952, 7013 |
| BsaHI | GRCGYC | 3 cut(s) | 909, 1803, 5580 |
| BsaI | GGTCTC | 2 cut(s) | 693, 4738 |
| BsaWI | WCCGGW | 3 cut(s) | 4117, 5329, 7112 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 12, 42, 6876, 6906 |
| Bse118I | RCCGGY | 2 cut(s) | 988, 5329 |
| Bse3DI | GCAATG | 7 cut(s) | 542, 829, 1020, 2078, 3433, 5538, 6438 |
| BseAI | TCCGGA | 1 cut(s) | 7112 |
| BseCI | ATCGAT | 1 cut(s) | 1153 |
| BseMI | GCAATG | 7 cut(s) | 542, 829, 1020, 2078, 3433, 5538, 6438 |
| BseRI | GAGGAG | 7 cut(s) | 962, 1891, 2432, 3650, 4093, 4819, 6731 |
| BseSI | GKGCMC | 3 cut(s) | 3855, 4348, 4506 |
| BseX3I | CGGCCG | 1 cut(s) | 986 |
| BseYI | CCCAGC | 4 cut(s) | 176, 760, 2372, 6001 |
| BsgI | GTGCAG | 5 cut(s) | 498, 621, 1113, 3462, 5388 |
| Bsh1236I | CGCG | 2 cut(s) | 163, 4681 |
| Bsh1285I | CGRYCG | 2 cut(s) | 989, 7206 |
| BshNI | GGYRCC | 1 cut(s) | 4503 |
| BshTI | ACCGGT | 1 cut(s) | 5329 |
| BshVI | ATCGAT | 1 cut(s) | 1153 |
| BsiEI | CGRYCG | 2 cut(s) | 989, 7206 |
| BsiHKAI | GWGCWC | 4 cut(s) | 982, 2189, 3488, 3855 |
| BsiHKCI | CYCGRG | 3 cut(s) | 451, 3794, 6796 |
| BslFI | GGGAC | 4 cut(s) | 86, 1590, 2446, 2859 |
| BsmBI | CGTCTC | 6 cut(s) | 316, 350, 554, 1331, 6849, 7089 |
| BsmFI | GGGAC | 4 cut(s) | 86, 1590, 2446, 2859 |
| BsmI | GAATGC | 3 cut(s) | 2155, 3429, 4796 |
| Bso31I | GGTCTC | 2 cut(s) | 693, 4738 |
| BsoBI | CYCGRG | 3 cut(s) | 451, 3794, 6796 |
| Bsp120I | GGGCCC | 1 cut(s) | 4344 |
| Bsp1286I | GDGCHC | 6 cut(s) | 982, 2189, 3488, 3855, 4348, 4506 |
| Bsp13I | TCCGGA | 1 cut(s) | 7112 |
| Bsp19I | CCATGG | 1 cut(s) | 3122 |
| Bsp68I | TCGCGA | 1 cut(s) | 4681 |
| BspDI | ATCGAT | 1 cut(s) | 1153 |
| BspEI | TCCGGA | 1 cut(s) | 7112 |
| BspFNI | CGCG | 2 cut(s) | 163, 4681 |
| BspHI | TCATGA | 1 cut(s) | 1225 |
| BspMAI | CTGCAG | 1 cut(s) | 118 |
| BspT107I | GGYRCC | 1 cut(s) | 4503 |
| BspTI | CTTAAG | 1 cut(s) | 4937 |
| BspTNI | GGTCTC | 2 cut(s) | 693, 4738 |
| BsrBI | CCGCTC | 1 cut(s) | 895 |
| BsrDI | GCAATG | 7 cut(s) | 542, 829, 1020, 2078, 3433, 5538, 6438 |
| BsrFI | RCCGGY | 2 cut(s) | 988, 5329 |
| BssAI | RCCGGY | 2 cut(s) | 988, 5329 |
| BssNAI | GTATAC | 1 cut(s) | 2626 |
| BssNI | GRCGYC | 3 cut(s) | 909, 1803, 5580 |
| BssSI | CACGAG | 3 cut(s) | 4735, 5776, 6380 |
| BssT1I | CCWWGG | 7 cut(s) | 1032, 1075, 2667, 3122, 5601, 5889, 6813 |
| Bst1107I | GTATAC | 1 cut(s) | 2626 |
| Bst2BI | CACGAG | 3 cut(s) | 4735, 5776, 6380 |
| Bst6I | CTCTTC | 5 cut(s) | 2742, 5067, 6708, 6717, 7116 |
| BstACI | GRCGYC | 3 cut(s) | 909, 1803, 5580 |
| BstAFI | CTTAAG | 1 cut(s) | 4937 |
| BstAPI | GCANNNNNTGC | 7 cut(s) | 2546, 3435, 4510, 5051, 6081, 6244, 6281 |
| BstBAI | YACGTR | 3 cut(s) | 596, 1952, 7013 |
| BstDSI | CCRYGG | 2 cut(s) | 707, 3122 |
| BstEII | GGTNACC | 2 cut(s) | 2137, 3368 |
| BstFNI | CGCG | 2 cut(s) | 163, 4681 |
| BstH2I | RGCGCY | 1 cut(s) | 1656 |
| BstHHI | GCGC | 6 cut(s) | 163, 1655, 2089, 4531, 4662, 5775 |
| BstMCI | CGRYCG | 2 cut(s) | 989, 7206 |
| BstNSI | RCATGY | 7 cut(s) | 617, 1780, 2530, 3131, 4429, 4876, 5814 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 3270, 3898 |
| BstPI | GGTNACC | 2 cut(s) | 2137, 3368 |
| BstSFI | CTRYAG | 2 cut(s) | 114, 4909 |
| BstSLI | GKGCMC | 3 cut(s) | 3855, 4348, 4506 |
| BstSNI | TACGTA | 1 cut(s) | 1952 |
| BstUI | CGCG | 2 cut(s) | 163, 4681 |
| BstV2I | GAAGAC | 1 cut(s) | 2433 |
| BstX2I | RGATCY | 5 cut(s) | 1477, 3528, 5090, 5272, 5930 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 65, 4035 |
| BstYI | RGATCY | 5 cut(s) | 1477, 3528, 5090, 5272, 5930 |
| BstZ17I | GTATAC | 1 cut(s) | 2626 |
| BstZI | CGGCCG | 1 cut(s) | 986 |
| Bsu15I | ATCGAT | 1 cut(s) | 1153 |
| BsuI | GTATCC | 2 cut(s) | 62, 5440 |
| BsuTUI | ATCGAT | 1 cut(s) | 1153 |
| BtgI | CCRYGG | 2 cut(s) | 707, 3122 |
| BtrI | CACGTC | 2 cut(s) | 874, 4025 |
| BtsI | GCAGTG | 7 cut(s) | 677, 962, 3359, 3445, 4551, 5401, 5821 |
| BtuMI | TCGCGA | 1 cut(s) | 4681 |
| CaiI | CAGNNNCTG | 2 cut(s) | 5462, 6278 |
| CciI | TCATGA | 1 cut(s) | 1225 |
| CfoI | GCGC | 6 cut(s) | 163, 1655, 2089, 4531, 4662, 5775 |
| Cfr10I | RCCGGY | 2 cut(s) | 988, 5329 |
| ClaI | ATCGAT | 1 cut(s) | 1153 |
| CseI | GACGC | 4 cut(s) | 536, 898, 1811, 6073 |
| CsiI | ACCWGGT | 2 cut(s) | 2430, 6828 |
| CspAI | ACCGGT | 1 cut(s) | 5329 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 410, 445, 714, 749, 2095, 2130 |
| DraI | TTTAAA | 3 cut(s) | 537, 4146, 6067 |
| EaeI | YGGCCR | 5 cut(s) | 189, 986, 2349, 3670, 5021 |
| EagI | CGGCCG | 1 cut(s) | 986 |
| Eam1104I | CTCTTC | 5 cut(s) | 2742, 5067, 6708, 6717, 7116 |
| EarI | CTCTTC | 5 cut(s) | 2742, 5067, 6708, 6717, 7116 |
| Ecl136II | GAGCTC | 2 cut(s) | 980, 3486 |
| EclXI | CGGCCG | 1 cut(s) | 986 |
| Eco105I | TACGTA | 1 cut(s) | 1952 |
| Eco130I | CCWWGG | 7 cut(s) | 1032, 1075, 2667, 3122, 5601, 5889, 6813 |
| Eco147I | AGGCCT | 2 cut(s) | 45, 82 |
| Eco24I | GRGCYC | 3 cut(s) | 982, 3488, 4348 |
| Eco31I | GGTCTC | 2 cut(s) | 693, 4738 |
| Eco32I | GATATC | 4 cut(s) | 3334, 4232, 5616, 6966 |
| Eco47I | GGWCC | 7 cut(s) | 1415, 1577, 2873, 3704, 4574, 4702, 7115 |
| Eco52I | CGGCCG | 1 cut(s) | 986 |
| Eco53kI | GAGCTC | 2 cut(s) | 980, 3486 |
| Eco57I | CTGAAG | 9 cut(s) | 990, 1161, 1287, 1530, 3641, 5390, 5822, 6381, 7215 |
| Eco88I | CYCGRG | 3 cut(s) | 451, 3794, 6796 |
| Eco91I | GGTNACC | 2 cut(s) | 2137, 3368 |
| EcoICRI | GAGCTC | 2 cut(s) | 980, 3486 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1468, 1577, 2873, 4345, 4702 |
| EcoO65I | GGTNACC | 2 cut(s) | 2137, 3368 |
| EcoRI | GAATTC | 2 cut(s) | 4968, 7213 |
| EcoRV | GATATC | 4 cut(s) | 3334, 4232, 5616, 6966 |
| EcoT14I | CCWWGG | 7 cut(s) | 1032, 1075, 2667, 3122, 5601, 5889, 6813 |
| EcoT22I | ATGCAT | 5 cut(s) | 6, 1504, 2866, 4012, 4798 |
| EcoT38I | GRGCYC | 3 cut(s) | 982, 3488, 4348 |
| ErhI | CCWWGG | 7 cut(s) | 1032, 1075, 2667, 3122, 5601, 5889, 6813 |
| Esp3I | CGTCTC | 6 cut(s) | 316, 350, 554, 1331, 6849, 7089 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1068, 1100, 2623, 2655, 2895, 2927 |
| FaqI | GGGAC | 4 cut(s) | 86, 1590, 2446, 2859 |
| FauI | CCCGC | 2 cut(s) | 2287, 3975 |
| FauNDI | CATATG | 4 cut(s) | 2131, 4792, 5390, 5913 |
| FbaI | TGATCA | 3 cut(s) | 4642, 5874, 6871 |
| FblI | GTMKAC | 3 cut(s) | 1948, 2625, 6804 |
| FriOI | GRGCYC | 3 cut(s) | 982, 3488, 4348 |
| GlaI | GCGC | 6 cut(s) | 162, 1654, 2088, 4530, 4661, 5774 |
| GsaI | CCCAGC | 4 cut(s) | 180, 764, 2376, 6005 |
| GsuI | CTGGAG | 7 cut(s) | 1042, 1143, 1572, 3399, 4173, 4296, 5939 |
| HaeII | RGCGCY | 1 cut(s) | 1656 |
| HgaI | GACGC | 4 cut(s) | 536, 898, 1811, 6073 |
| HhaI | GCGC | 6 cut(s) | 163, 1655, 2089, 4531, 4662, 5775 |
| Hin1I | GRCGYC | 3 cut(s) | 909, 1803, 5580 |
| Hin6I | GCGC | 6 cut(s) | 161, 1653, 2087, 4529, 4660, 5773 |
| HinP1I | GCGC | 6 cut(s) | 161, 1653, 2087, 4529, 4660, 5773 |
| HincII | GTYRAC | 5 cut(s) | 373, 1801, 3462, 3555, 3910 |
| HindII | GTYRAC | 5 cut(s) | 373, 1801, 3462, 3555, 3910 |
| HindIII | AAGCTT | 2 cut(s) | 5256, 5960 |
| HpaI | GTTAAC | 2 cut(s) | 3555, 3910 |
| Hpy99I | CGWCG | 1 cut(s) | 5582 |
| HpyCH4IV | ACGT | 9 cut(s) | 595, 873, 1951, 2555, 3283, 3739, 4024, 5580, 7012 |
| HpySE526I | ACGT | 9 cut(s) | 595, 873, 1951, 2555, 3283, 3739, 4024, 5580, 7012 |
| Hsp92I | GRCGYC | 3 cut(s) | 909, 1803, 5580 |
| HspAI | GCGC | 6 cut(s) | 161, 1653, 2087, 4529, 4660, 5773 |
| Kpn2I | TCCGGA | 1 cut(s) | 7112 |
| Ksp22I | TGATCA | 3 cut(s) | 4642, 5874, 6871 |
| KspAI | GTTAAC | 2 cut(s) | 3555, 3910 |
| MabI | ACCWGGT | 2 cut(s) | 2430, 6828 |
| MaeII | ACGT | 9 cut(s) | 595, 873, 1951, 2555, 3283, 3739, 4024, 5580, 7012 |
| MbiI | CCGCTC | 1 cut(s) | 895 |
| MfeI | CAATTG | 6 cut(s) | 2358, 2541, 3408, 4434, 5040, 5147 |
| MflI | RGATCY | 5 cut(s) | 1477, 3528, 5090, 5272, 5930 |
| MhlI | GDGCHC | 6 cut(s) | 982, 2189, 3488, 3855, 4348, 4506 |
| MlsI | TGGCCA | 1 cut(s) | 5023 |
| MluNI | TGGCCA | 1 cut(s) | 5023 |
| MlyI | GAGTC | 9 cut(s) | 63, 750, 926, 3045, 4556, 4905, 5788, 6517, 6788 |
| MmeI | TCCRAC | 5 cut(s) | 595, 768, 2318, 4264, 7186 |
| Mox20I | TGGCCA | 1 cut(s) | 5023 |
| Mph1103I | ATGCAT | 5 cut(s) | 6, 1504, 2866, 4012, 4798 |
| MroI | TCCGGA | 1 cut(s) | 7112 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1174, 4694, 5403, 6375, 7213 |
| MscI | TGGCCA | 1 cut(s) | 5023 |
| Msp20I | TGGCCA | 1 cut(s) | 5023 |
| MspA1I | CMGCKG | 2 cut(s) | 1994, 6785 |
| MspCI | CTTAAG | 1 cut(s) | 4937 |
| MunI | CAATTG | 6 cut(s) | 2358, 2541, 3408, 4434, 5040, 5147 |
| Mva1269I | GAATGC | 3 cut(s) | 2155, 3429, 4796 |
| MvnI | CGCG | 2 cut(s) | 163, 4681 |
| NciI | CCSGG | 5 cut(s) | 203, 511, 1419, 4490, 6977 |
| NcoI | CCATGG | 1 cut(s) | 3122 |
| NdeI | CATATG | 4 cut(s) | 2131, 4792, 5390, 5913 |
| NmeAIII | GCCGAG | 1 cut(s) | 961 |
| NruI | TCGCGA | 1 cut(s) | 4681 |
| NsiI | ATGCAT | 5 cut(s) | 6, 1504, 2866, 4012, 4798 |
| NspI | RCATGY | 7 cut(s) | 617, 1780, 2530, 3131, 4429, 4876, 5814 |
| OliI | CACNNNNGTG | 1 cut(s) | 4815 |
| PaeI | GCATGC | 1 cut(s) | 3131 |
| PaeR7I | CTCGAG | 3 cut(s) | 451, 3794, 6796 |
| PagI | TCATGA | 1 cut(s) | 1225 |
| PceI | AGGCCT | 2 cut(s) | 45, 82 |
| PctI | GAATGC | 3 cut(s) | 2155, 3429, 4796 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1174, 4694, 5403, 6375, 7213 |
| PflFI | GACNNNGTC | 1 cut(s) | 7019 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 156 |
| PfoI | TCCNGGA | 2 cut(s) | 2884, 6366 |
| PinAI | ACCGGT | 1 cut(s) | 5329 |
| PleI | GAGTC | 9 cut(s) | 62, 750, 925, 3044, 4556, 4904, 5787, 6517, 6788 |
| PpsI | GAGTC | 9 cut(s) | 62, 750, 925, 3044, 4556, 4904, 5787, 6517, 6788 |
| Ppu21I | YACGTR | 3 cut(s) | 596, 1952, 7013 |
| PpuMI | RGGWCCY | 3 cut(s) | 1577, 2873, 4702 |
| PshAI | GACNNNNGTC | 2 cut(s) | 3270, 3898 |
| PsiI | TTATAA | 3 cut(s) | 2711, 3680, 5262 |
| Psp124BI | GAGCTC | 2 cut(s) | 982, 3488 |
| Psp5II | RGGWCCY | 3 cut(s) | 1577, 2873, 4702 |
| PspEI | GGTNACC | 2 cut(s) | 2137, 3368 |
| PspFI | CCCAGC | 4 cut(s) | 176, 760, 2372, 6001 |
| PspOMI | GGGCCC | 1 cut(s) | 4344 |
| PspPPI | RGGWCCY | 3 cut(s) | 1577, 2873, 4702 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3576, 3608 |
| PstI | CTGCAG | 1 cut(s) | 118 |
| PstNI | CAGNNNCTG | 2 cut(s) | 5462, 6278 |
| PsuI | RGATCY | 5 cut(s) | 1477, 3528, 5090, 5272, 5930 |
| PsyI | GACNNNGTC | 1 cut(s) | 7019 |
| PvuII | CAGCTG | 2 cut(s) | 1994, 6785 |
| RruI | TCGCGA | 1 cut(s) | 4681 |
| SacI | GAGCTC | 2 cut(s) | 982, 3488 |
| ScaI | AGTACT | 5 cut(s) | 1727, 2010, 4446, 4886, 6141 |
| SchI | GAGTC | 9 cut(s) | 63, 750, 926, 3045, 4556, 4905, 5788, 6517, 6788 |
| SduI | GDGCHC | 6 cut(s) | 982, 2189, 3488, 3855, 4348, 4506 |
| SexAI | ACCWGGT | 2 cut(s) | 2430, 6828 |
| SfcI | CTRYAG | 2 cut(s) | 114, 4909 |
| Sfr274I | CTCGAG | 3 cut(s) | 451, 3794, 6796 |
| SinI | GGWCC | 7 cut(s) | 1415, 1577, 2873, 3704, 4574, 4702, 7115 |
| SlaI | CTCGAG | 3 cut(s) | 451, 3794, 6796 |
| SnaBI | TACGTA | 1 cut(s) | 1952 |
| SpeI | ACTAGT | 2 cut(s) | 2792, 5674 |
| SphI | GCATGC | 1 cut(s) | 3131 |
| SseBI | AGGCCT | 2 cut(s) | 45, 82 |
| SspI | AATATT | 6 cut(s) | 4835, 5031, 5625, 5765, 5853, 6071 |
| SstI | GAGCTC | 2 cut(s) | 982, 3488 |
| StuI | AGGCCT | 2 cut(s) | 45, 82 |
| StyI | CCWWGG | 7 cut(s) | 1032, 1075, 2667, 3122, 5601, 5889, 6813 |
| TaiI | ACGT | 9 cut(s) | 598, 876, 1954, 2558, 3286, 3742, 4027, 5583, 7015 |
| TaqII | GACCGA | 1 cut(s) | 1647 |
| TatI | WGTACW | 8 cut(s) | 1725, 2008, 3652, 3823, 4444, 4884, 6094, 6139 |
| TauI | GCSGC | 6 cut(s) | 191, 895, 988, 997, 2354, 4766 |
| TspGWI | ACGGA | 4 cut(s) | 696, 1484, 2787, 3892 |
| Tth111I | GACNNNGTC | 1 cut(s) | 7019 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 156 |
| Vha464I | CTTAAG | 1 cut(s) | 4937 |
| VneI | GTGCAC | 1 cut(s) | 3851 |
| VpaK11BI | GGWCC | 7 cut(s) | 1415, 1577, 2873, 3704, 4574, 4702, 7115 |
| XbaI | TCTAGA | 1 cut(s) | 4184 |
| XceI | RCATGY | 7 cut(s) | 617, 1780, 2530, 3131, 4429, 4876, 5814 |
| XcmI | CCANNNNNNNNNTGG | 5 cut(s) | 578, 3151, 4334, 6944, 7055 |
| XhoI | CTCGAG | 3 cut(s) | 451, 3794, 6796 |
| XmiI | GTMKAC | 3 cut(s) | 1948, 2625, 6804 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1174, 4694, 5403, 6375, 7213 |
| ZraI | GACGTC | 1 cut(s) | 5581 |
| ZrmI | AGTACT | 5 cut(s) | 1727, 2010, 4446, 4886, 6141 |
| Zsp2I | ATGCAT | 5 cut(s) | 6, 1504, 2866, 4012, 4798 |