Rh2CG547900

HEAT repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0002980
Physical Location & Seq
Reverse (-)
72751328 .. 72780949
29622 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG547900.1

Sequence Viewer

Length: 6906 bp
ATGGCGAAGAAGCACGTCAAAGATAACCCCCTACCGCTTTCTCAGTTCGGCGTCTTGGTAGCTCAATTGGAGTCCATAGTCGCCTCCGCCGCCCAGAAGCCACCGGAGCCCCTCCTCTGCTTCGATCTCCTCTCCGATCTCATCTCCGCCATCGCCGAAGAGCCCAAGGAGTCGATTTTGTTATGGCAAAGACGATGCGAGGAGGCACTTTATTCACTGCTTGTACTCGGAGCTCGGAGGCCGGTGCGGCATTTGGCTTCAGTTGCAATGGCGAGGGTTATATCCAAGGGAGATAGCATTTCAATATACTCCAGAGCCAGCAGTCTCCAAGGGTTTCTCTCTGATGGGAAGAAGAGCGACCCGCAAAAAGTAGCTGGAGCTGCTCAATGCTTAGGAGAATTGTATCGATATTTTGGGAGGCGAATCACTTCAGGTTTACTTGAAACGACTATGATTGCCACAAAACTCATCAAGTTTCATGAGGAATTTGTGAGACAAGAGGCTTTATATATGCTTCAAAATGCTTTGGAAGGGTCTGGTGGTAGTGCTGCTGCTTCAGCATACACGGAGGCATTTCGTCTCATCATGCGGTTTGCTGTTGGTGATAAATCATTTCTTGTCAGAATCGCTGCTGCAAGATGTTTGAAGGCATTTGCTATTATTGGAGGACCGGGTTTAGGGGTGGGAGAACTTGACAATTCAGCTTCTTTCTGTGTTAAGGCCCTTGAGGATCCTGTTTCATCTGTCCGTGATGCATTTGCTGAAGCATTGGGTTCGCTGCTTGCTCTTGGAATGAATCCTGATGCACAGGTTCAACCAAGAGGGAAGGGACCTTTTCCTCCAGCAAAGAAACTAGAAGGTGGTTTGCAAAGGCATTTAGCGTTGCCTTTCACAAAAGCAAGTGGCACTAGGTCAAAGGATGTGCGAGTTGGCATAACATTGTCTTGGGTGTTCTTCTTACAGGCAATTCGTTTGAAGTACTTGCATCCAGACAGTGAGCTTCAAAACTATGCAATTCAGGTTATGGACATGCTTCGTGCCGATACTTCTGTTGACGCCTATACTCTGGCTTGTGTTCTCTATATCCTTCGTGTTGGTGTTACCGATCAGATGACAGAACCTACTCAGAGGAGTTTTTTGGTTTTTCTTGGACAGCAGCTTATGTCTCCTGATGCCAGTCCTTCCATGAAAATTGCTGGTCTACGTACTGTCTCATATACCCTAAAAACTCTGGGAGAGGTTCCAGCTGAGTTCAAGGAAGTACTTGACAACACTGTTGTTGCAGCAGTATCTCATTCTTCTCAACTTGTACGGATTGAGGCTGCTTTGACATTGCGTGCACTGGCTGAGGTTGATCCCACCTGTGTTGGTGGTTTAATTTCATATGGGGTGACCATGTTGAATGCTCTGAGAGAAAATATATCGTTTGAAAAGGGGAGCACTTTGCAATTAGAGCTTGATTCTTTGCATGGGCAAGCTACTGTGTTAGCAACTCTGGTGTCCATTTCCCCAAAATTACCTCTTGGTTATCCCGCTAGGTTGCCCAAATCAGTTCTTGAAGTTTCAAAGAAAATGCTGACTGAATCTAGTCGGAATCCTCTGGCCGCTACAATTGAAAAAGAAGCTGGGTGGTTACTTTTGTCATCTCTCTTAGCATCCATGCCGAAGGAGGAGCTTGAAGACCAGGTTTTTGATATTCTTTCCTTGTGGGTGTCCCTTTTTACTGGAAACCCACAAAATGAAACTAACCAAACTGGGGATTTGATATCTAGGATTCGCATGTGGTCTGCTGCAATTGATGCACTTACGTCATTTTTAAGATGCTTTCTTTCCCATGATGCTAAGATTAATCGGATTTTGCTTCAACCTGTGCTTGTATACCTAAGTAGGGCTTTATCCTTTATATCACTGATAGCGGCCAAGGAACTGCCAAATGTGAAGCCTGCTCTGAATATATTTATTATCAGGACACTAATAGCTTATCAGTCTCTTCCTGATCCAATGGCATATAAGAATGAACACCCCCAAATTATTCAAATTTGCAGTAGTCCATTCAGAGAGGCTTTTGGGTGTGAAGAAAGTTCATGCTTGAGGTTTCTGTTAGACAAAAGAGATGCATGGTTAGGTCCCTGGATTCCTGGAAGGGATTGGTTTGAAGATGAACTTCGTGCTTTTCAAGGTGGAAAAGATGGTATTATGCCCTGTGTCTGGGAGAACGAAGTTTCTAGCTTTCCTCAGCCGGAACCAGTAAACAAGATATTGGTGAACCAGATGCTTCTCTGCTTTGGAGTCATGTTTGCTTCTCAGGATAGTGGTGGGATGCTGTCACTTCTTGGAATGATTGAGCAATCTATGAAAGCTGGAAGAAAGCAACCATGGCATGCAGCTAGTGTAACCAATATATGTGTGGGGTTACTTTCGGGATTCAAGGCTTTGCTTTCCTTGCGTTCCCAGCCATTAGCAGTTGATGTATTAAATTCAGCACAGGCTATATTTCAGAGTATTCTAGCAGAGGGTGACATCTGTCCATCACAACGTAGGGCTGCATCAGAATGTCTTGGCCTTTTAGCTCGTCTTGGAAATGATATCTTTACAGCAAGAATGACAAGATCACTGCTTGGTGACCTAACTGGAGCAACAGATTCAAACTATGCAGGCTCAATTGCTTTTGCTCTGGGTTGCATTCATTGCAGTGCAGGAGGAATGGCATTGTCGACATTAGTGCCTTCAACTGTGAGCTCAATTTCTTTGCTTGCTAAAAGTTCAATAGCTGGTTTACAGATCTGGTCTTTACATGGACTTCTGTTAACCATAGAAGCTGCTGGCTTGTCCTATGTATCTCAAGTTCAGGCAACACTTGGCCTTGCTTTGGATATTCTTTTGTCTGAGGAGAATGGTTGGGTTGTACTTCAGCAAGGGGTTGGCCGTCTTATAAATGCTATTGTAGCTGTTCTTGGTCCTGAACTTGCCCCTGGAAGTATTTTCTTTTCACGTTGCAAGTCAGTTGTTTCAGAGATAAGCTCAGGCCAAGAAACAGCAACAATGCTCGAGAGTGTTCGCTTTACTCAACAACTTGTACTATTTGCACCACAAGCCGTTTCTGTGCACACCCATGTCCAAACTCTTCTTCCTACTTTGTCCTCAAGACAGCCAGTTTTGAGGCATCTTGCTGTTTCCACTCTTCGGCATCTTATTGAGAAAGATCCAGTGTCCGTTGTTAACGAGCAAATAGAAGATAAACTATTTCAAATGCTGGATGAAGAAACTGATTCCGAGATTGGTGATCTGGTGCGGGCCACAATTATGCGATTGCTCTATGTATCAAGCCCTTCACATCCATCTCATTGGATGTCAATATGTCGTAGTGTGGTTCTTTCCACATCAATGAGGAGAAATGCTGATAGTACAAACGGTTTAGAAAATGATCCGGTGGGTAAAGAGGGTGATCCAAGTTTAAATTCTGGAGAAGATGATGATAACATGGTTTCTGGATCTAGAAGCTCTCCCCAGTTGATTCTCAGCAGGGAAAAGCACCTCAGATACCGAACCAGAGTGTTTGCTGCTGAGTGTTTGAGTTACCTACCTGGAGCTGTTGGAAAGAATCCAGCTCATTTTGATCTCTGTTTGGCTAGGGACCAATCTACTAATGGACGGGCCTCTGGTGATTGGCTTGTCCTCCATATCCAAGAGCTTATAGCACTTGCTTATCAGATAAGCACGATCCAGTTTGAAAACATGCAGCCAATTGGTGTAGTACTTCTGAGTACGATTACAGACAAGTTCGAGAGGACTCCTGACCCGGAGCTTCCAGGGCACCTCCTGCTGGAACAATATCAGGCGCAGCTAGTGTCTGCTGTCCGCACTGCCTTAGACTCGTCCTCTGGTCCTATTCTTTTGGAAGCAGGCTTCCAGTTGGCTACAAAGATATTCACAAGTGGAATAATTAAGGGTGATCAGATTGCTGTTAAGCGCATATATTCTTTGATTTCGCGACCATTGAATGACTTCAAGGACCTGTATTATCCTTCATTTGCAGAATGGGTCTCGTGCAAGATTAAGATAAGACTTCTTGCTGCCCATGCTTCTCTCAAATGTTATACATATGCATTCTTGAGGAGACACCAAAGTGCGGTTCCAGATGAATATTTAGCACTTTTACCATTATTTTCAAAGAGTTCAAACATGCTTGGGAAGTACTGGATTAGAGTCTTGAAGGACTACAGCTATATTTGCTTGTGCGTGCATCTTAAGGCAAAGTGGAATCCTTTTCTTGATGGAATTCAATCACCTCTGGTATCATCAAAGTTGGAGCCCTGCTTGGAAGAATCATGGCCAGTAATATTGCAGGCAATTGCATTGGATGCAGTTCCAGTGAATCTTGAAGAGAATGAATCTTCAAAATCCACTGATGAAACTACATCAAGTAATAGCTTATTGTCTGGATATAGTATGGTTCAATTGGAATCCGAAGATTATCAGTTTCTCTGGGGATTTGCTTTGCTAGTTTTATTTCAGGGGCAAAATTCGACCCCCAGTGGATTGAAAAATCCAGTTTCTTTTGTTAAAGCTTATAACAGGGTTGATCCATCCAGTGAAGAATTATCTTCCCCAGGAGTTAATTTATACGAGATTGTATTACCGGTCTTCCAGTTTTTGTCCACCAAAAGATTTGCCAGTGCAGGATTTCTCACTATGGACATATGCAGTGAATTGCTTCAGGTTTTCTCATATTCTATGTGCATGGATAATTCATGGGATACTCTTTCAGTGTCTGTTCTATCACAGATTGTGAAGAACTGCCCTGAAACATTTTATGAACCGGAAAACTTTGCTTATCTGGCAATGGAACTCTGTTTGGCATACCTCTGCAAAGTGTTTCTAAGTACCGACGTGACATCTCTGGACAAATCCTTGGAGGATTTGATATCCTCAATATTTGTCACAGCAAAAACCCTTGTGAACTGTTTTCAACCAAAGAAGCAACTAGTATCTGCGGCATTGGCGTTTGTTTTAATTGGTTACAAGGGAATCAGAGAAGTCTCAACTGACTTCTGCTTCTCCAAACTTGATGAATATTTCAAGTGCACGAGTCTCTTATTGAAAAGATTTATTGATGATACATGCAGTGTTGGTGATGATGGTATTCTTCAGATGAGAAAAATATTGGGAACTTGTCTGAATGTGATCACTGGTTTAACCAAGGACTGCATTGAGTGTATTCATATGCTGGAGAATAAGAGATCTGATTCGCATACATTACTGCAAACAAAGCTTGCTTTCTCTCTTGAACAAACTATATCATTTGCCAAGCTGGGTTATGAAATGGATTATCTTGAAGATAATACAGATGGTGATTCAATTTATTATGGTATGTTTAAATATTGCACCAGACGTGTCCAAACTGTACTCACCGATTCAAGTTTACAGGTTCAAGAAATTGGGTTGCAAGTACTAAAAAACTTGATTCAGAAAGGCACAGATGCAGAGGATGACACTTTCTTAATGCTTTTTGTTGGGGAACTTGCTTGTGATTTTTTCCTGATAATGCAGAATATGCTAAAGAAACCTGTAACTGAAAAATCAGCATCTGTTGCTGGTGAATGTTTAAGACTTTTAGTGCTTCTGCAAACATCGTCAAAATCTAGCGAATGTCAGAGACGTTTTATGAATTTGCTCCTGGAAGCTGTTCTCGTGGTTTTCAAGGCTTCAGAAGAAGGTTCTTCTCAGGAAGTCAATAAACTTAGGAGCATTGCGGTGAGACTTGTTTCTCATCTTGCTCAAGTTCCTTCCTCAGCAGTTCACTTCAAGGATGTGTTGCTGTCTATGCCTCTGACTCACCGACAGCAATTTCAGGGGTTTATTCGTGCTTCTGTGACCCAAGAGCATAATGCAACACGGATGAAGCCCACAACTCCATTTTTGGAGATAAAATTACCAGTGCCAACAGTGGTAAGTAAAGAGAAACAGGCTCCACTACCAGCCACTACATCACATTCTTCTGTTTCTGATTATCAAAGAGGTGGAGAGGAGGAAGAGGATGAAGATGAAGATGATTGGGATGCTTTTCAGTCTTTTCCTGCTACTACAAATGCAGCTGAAATTGACTCGAGAGTAGACAGTGCCTTGGAAACACCCGACCTGGTTGAGAAATTGTCTCCTTCGGAAGTGAATACAGAGAGCGATCAATTTCATGGAAATTCTGTTTCCCAACCTCTCAACAATGTAGATGCTACCAGCAAAGCAGACCATCAAGAGGCTGGCGAAGCTGAGGTGATATCTGATTCCCTGGATGATCTGAGATCCTCACAGGGTAATATACTACGTGACAATGTCAAGACAGAAAAACCCGATGATTCCCAAACTAATAGTGGTGTTATCGAGGCATTGGATGATCAAAAGGAGAGAGACGATAAATTGTTATCCGGACCAGAAGAGGGAATGGGAGCAGAGTTGAACCAAGTTACTGAACACAGACCATCTGAATTTCATCCTATTGAAGATGCTGAAGGATTGGTCGGAAAGAATTCAGCACACCTTGAGCAGGGAAAGGAGAACACTGATAATAGACCAGTACAATCATCATCAGATCCTGTAAAGCTTGGTGAGGAAGTAAAGGGAGCAGGGTCGAACCAAGTGACAGAACAGATACCATCTGAACTTCATCCTGTCGAAGATGCTCATGGATCGGTTGCAGTGAATTCAGCGCACCATGAGCAGGGAAAGGAGATCCCTGATAATAGACCAGTGCAATCATCATCAGACCCTGTAAAGCTTGACAAGCAAGTAAAGGATAAAAGAGAAGATAAAGAGTCGGCAGTTGAAGATTCTCGGCCCCAACAACACGAACAGAGCGCCAAAGTTCAAGCTTTAGTTAAAAGCAATGATGATGCTGAGAAATCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2301

Amino Acids

252.9

Weight (kDa)

5.26

Isoelectric Point (pI)

47.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Laa1_Sip1_HTR5 PF20210 1223 - 1408 4.1e-43 Laa1/Sip1/HEATR5 HEAT repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2933, 4572
AccB1I GGYRCC 1 cut(s) 3813
AccI GTMKAC 4 cut(s) 1201, 1878, 2714, 6114
AccII CGCG 1 cut(s) 3991
AccIII TCCGGA 1 cut(s) 6422
AcoI YGGCCR 4 cut(s) 1602, 1917, 2923, 4331
AcuI CTGAAG 9 cut(s) 243, 414, 540, 783, 2894, 4700, 5132, 5691, 6525
AcyI GRCGYC 2 cut(s) 51, 1056
AflII CTTAAG 1 cut(s) 4247
AflIII ACRYGT 1 cut(s) 5392
AgeI ACCGGT 1 cut(s) 4639
AhlI ACTAGT 1 cut(s) 4984
AjiI CACGTC 3 cut(s) 16, 4891, 5393
AjuI GAANNNNNNNTTGG 6 cut(s) 3111, 3143, 3442, 3474, 4116, 4148
AleI CACNNNNGTG 1 cut(s) 4125
Alw21I GWGCWC 6 cut(s) 235, 1342, 1442, 2741, 3108, 5087
Alw44I GTGCAC 3 cut(s) 1338, 3104, 5083
AlwNI CAGNNNCTG 4 cut(s) 4772, 5588, 6590, 6764
Ama87I CYCGRG 2 cut(s) 3047, 6106
Aor13HI TCCGGA 1 cut(s) 6422
ApaLI GTGCAC 3 cut(s) 1338, 3104, 5083
ArsI GACNNNNNNTTYG 2 cut(s) 1673, 1705
AseI ATTAAT 1 cut(s) 1848
AsiGI ACCGGT 1 cut(s) 4639
Asp700I GAANNNNTTC 5 cut(s) 427, 4004, 4713, 5685, 6523
AspLEI GCGC 4 cut(s) 3841, 3972, 6706, 6854
AsuC2I CCSGG 2 cut(s) 672, 3800
AvaI CYCGRG 2 cut(s) 3047, 6106
AvaII GGWCC 8 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012, 6425
BaeGI GKGCMC 4 cut(s) 1342, 3108, 3816, 5087
BaeI ACNNNNGTAYC 2 cut(s) 1035, 1068
BalI TGGCCA 1 cut(s) 4333
BamHI GGATCC 1 cut(s) 730
BanI GGYRCC 1 cut(s) 3813
BanII GRGCYC 5 cut(s) 111, 165, 235, 2741, 4314
BauI CACGAG 3 cut(s) 4045, 5086, 5690
BbsI GAAGAC 2 cut(s) 1686, 4636
Bbv12I GWGCWC 6 cut(s) 235, 1342, 1442, 2741, 3108, 5087
BbvCI CCTCAGC 4 cut(s) 1347, 2235, 5791, 6267
BceAI ACGGC 2 cut(s) 2910, 3080
BcgI CGANNNNNNTGC 4 cut(s) 756, 790, 2704, 2738
BciVI GTATCC 1 cut(s) 4750
BclI TGATCA 3 cut(s) 3952, 5184, 6391
BcnI CCSGG 2 cut(s) 672, 3800
BcuI ACTAGT 1 cut(s) 4984
BfmI CTRYAG 1 cut(s) 4219
BfoI RGCGCY 1 cut(s) 6855
BfrI CTTAAG 1 cut(s) 4247
BfuI GTATCC 1 cut(s) 4750
BglI GCCNNNNNGGC 1 cut(s) 247
BglII AGATCT 2 cut(s) 2781, 5240
BmcAI AGTACT 5 cut(s) 980, 1263, 3756, 4196, 5451
Bme18I GGWCC 8 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012, 6425
BmeT110I CYCGRG 2 cut(s) 3047, 6106
BmgBI CACGTC 3 cut(s) 16, 4891, 5393
BmrI ACTGGG 3 cut(s) 1764, 3502, 4527
BmuI ACTGGG 3 cut(s) 1764, 3502, 4527
BoxI GACNNNNGTC 1 cut(s) 2523
BpiI GAAGAC 2 cut(s) 1686, 4636
BplI GAGNNNNNCTC 2 cut(s) 3005, 3037
BpmI CTGGAG 7 cut(s) 295, 396, 825, 2652, 3483, 3606, 5249
Bpu10I CCTNAGC 6 cut(s) 391, 1347, 2235, 3022, 5791, 6267
BpuEI CTTGAG 7 cut(s) 746, 2110, 2826, 3127, 4132, 5763, 6557
BpuMI CCSGG 2 cut(s) 672, 3800
Bsa29I ATCGAT 1 cut(s) 406
BsaAI YACGTR 2 cut(s) 1205, 6323
BsaHI GRCGYC 2 cut(s) 51, 1056
BsaI GGTCTC 1 cut(s) 4048
BsaWI WCCGGW 5 cut(s) 103, 3427, 4639, 4819, 6422
Bse118I RCCGGY 2 cut(s) 241, 4639
Bse3DI GCAATG 6 cut(s) 273, 1331, 2686, 4848, 5748, 6886
BseAI TCCGGA 1 cut(s) 6422
BseCI ATCGAT 1 cut(s) 406
BseMI GCAATG 6 cut(s) 273, 1331, 2686, 4848, 5748, 6886
BseRI GAGGAG 9 cut(s) 104, 119, 215, 1144, 1685, 2903, 3403, 4129, 6041
BseSI GKGCMC 4 cut(s) 1342, 3108, 3816, 5087
BseYI CCCAGC 3 cut(s) 1625, 2451, 5311
BsgI GTGCAG 2 cut(s) 2715, 4698
Bsh1236I CGCG 1 cut(s) 3991
BshNI GGYRCC 1 cut(s) 3813
BshTI ACCGGT 1 cut(s) 4639
BshVI ATCGAT 1 cut(s) 406
BsiHKAI GWGCWC 6 cut(s) 235, 1342, 1442, 2741, 3108, 5087
BsiHKCI CYCGRG 2 cut(s) 3047, 6106
BsiSI CCGG 9 cut(s) 104, 242, 671, 2240, 3428, 3800, 4640, 4820, 6423
BslFI GGGAC 4 cut(s) 843, 1699, 2112, 3647
BsmBI CGTCTC 3 cut(s) 584, 5650, 6399
BsmFI GGGAC 4 cut(s) 843, 1699, 2112, 3647
BsmI GAATGC 3 cut(s) 1408, 2682, 4106
Bso31I GGTCTC 1 cut(s) 4048
BsoBI CYCGRG 2 cut(s) 3047, 6106
Bsp13I TCCGGA 1 cut(s) 6422
Bsp19I CCATGG 1 cut(s) 2375
Bsp68I TCGCGA 1 cut(s) 3991
BspDI ATCGAT 1 cut(s) 406
BspEI TCCGGA 1 cut(s) 6422
BspFNI CGCG 1 cut(s) 3991
BspHI TCATGA 1 cut(s) 478
BspQI GCTCTTC 2 cut(s) 153, 347
BspT107I GGYRCC 1 cut(s) 3813
BspTI CTTAAG 1 cut(s) 4247
BspTNI GGTCTC 1 cut(s) 4048
BsrDI GCAATG 6 cut(s) 273, 1331, 2686, 4848, 5748, 6886
BsrFI RCCGGY 2 cut(s) 241, 4639
BssAI RCCGGY 2 cut(s) 241, 4639
BssNAI GTATAC 1 cut(s) 1879
BssNI GRCGYC 2 cut(s) 51, 1056
BssSI CACGAG 3 cut(s) 4045, 5086, 5690
BssT1I CCWWGG 8 cut(s) 165, 285, 328, 1920, 2375, 4911, 5199, 6123
Bst1107I GTATAC 1 cut(s) 1879
Bst2BI CACGAG 3 cut(s) 4045, 5086, 5690
Bst6I CTCTTC 8 cut(s) 153, 347, 1995, 3129, 3186, 4377, 6027, 6426
BstACI GRCGYC 2 cut(s) 51, 1056
BstAFI CTTAAG 1 cut(s) 4247
BstAPI GCANNNNNTGC 6 cut(s) 1799, 2688, 3820, 4361, 5554, 5591
BstBAI YACGTR 2 cut(s) 1205, 6323
BstDSI CCRYGG 1 cut(s) 2375
BstEII GGTNACC 2 cut(s) 1390, 2621
BstENI CCTNNNNNAGG 1 cut(s) 6539
BstFNI CGCG 1 cut(s) 3991
BstH2I RGCGCY 1 cut(s) 6855
BstHHI GCGC 4 cut(s) 3841, 3972, 6706, 6854
BstNSI RCATGY 6 cut(s) 1033, 1783, 2384, 3739, 4186, 5124
BstPAI GACNNNNGTC 1 cut(s) 2523
BstPI GGTNACC 2 cut(s) 1390, 2621
BstSFI CTRYAG 1 cut(s) 4219
BstSLI GKGCMC 4 cut(s) 1342, 3108, 3816, 5087
BstSNI TACGTA 1 cut(s) 1205
BstUI CGCG 1 cut(s) 3991
BstV2I GAAGAC 2 cut(s) 1686, 4636
BstX2I RGATCY 8 cut(s) 730, 2781, 3202, 3491, 5240, 6299, 6586, 6726
BstXI CCANNNNNNTGG 1 cut(s) 3345
BstYI RGATCY 8 cut(s) 730, 2781, 3202, 3491, 5240, 6299, 6586, 6726
BstZ17I GTATAC 1 cut(s) 1879
Bsu15I ATCGAT 1 cut(s) 406
BsuI GTATCC 1 cut(s) 4750
BsuTUI ATCGAT 1 cut(s) 406
BtgI CCRYGG 1 cut(s) 2375
BtgZI GCGATG 1 cut(s) 136
BtrI CACGTC 3 cut(s) 16, 4891, 5393
BtsI GCAGTG 7 cut(s) 215, 2612, 2698, 3861, 4711, 5131, 6699
BtuMI TCGCGA 1 cut(s) 3991
CaiI CAGNNNCTG 4 cut(s) 4772, 5588, 6590, 6764
CciI TCATGA 1 cut(s) 478
CfoI GCGC 4 cut(s) 3841, 3972, 6706, 6854
Cfr10I RCCGGY 2 cut(s) 241, 4639
ClaI ATCGAT 1 cut(s) 406
CseI GACGC 2 cut(s) 40, 1064
CsiI ACCWGGT 2 cut(s) 1683, 6138
CspAI ACCGGT 1 cut(s) 4639
CspCI CAANNNNNGTGG 2 cut(s) 1348, 1383
DraI TTTAAA 2 cut(s) 3456, 5377
EaeI YGGCCR 4 cut(s) 1602, 1917, 2923, 4331
Eam1104I CTCTTC 8 cut(s) 153, 347, 1995, 3129, 3186, 4377, 6027, 6426
EarI CTCTTC 8 cut(s) 153, 347, 1995, 3129, 3186, 4377, 6027, 6426
EciI GGCGGA 2 cut(s) 76, 136
Ecl136II GAGCTC 2 cut(s) 233, 2739
Eco105I TACGTA 1 cut(s) 1205
Eco130I CCWWGG 8 cut(s) 165, 285, 328, 1920, 2375, 4911, 5199, 6123
Eco24I GRGCYC 5 cut(s) 111, 165, 235, 2741, 4314
Eco31I GGTCTC 1 cut(s) 4048
Eco32I GATATC 4 cut(s) 1767, 2587, 4926, 6276
Eco47I GGWCC 8 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012, 6425
Eco53kI GAGCTC 2 cut(s) 233, 2739
Eco57I CTGAAG 9 cut(s) 243, 414, 540, 783, 2894, 4700, 5132, 5691, 6525
Eco88I CYCGRG 2 cut(s) 3047, 6106
Eco91I GGTNACC 2 cut(s) 1390, 2621
EcoICRI GAGCTC 2 cut(s) 233, 2739
EcoNI CCTNNNNNAGG 1 cut(s) 6539
EcoO109I RGGNCCY 4 cut(s) 721, 830, 2126, 4012
EcoO65I GGTNACC 2 cut(s) 1390, 2621
EcoRI GAATTC 3 cut(s) 4278, 6523, 6697
EcoRV GATATC 4 cut(s) 1767, 2587, 4926, 6276
EcoT14I CCWWGG 8 cut(s) 165, 285, 328, 1920, 2375, 4911, 5199, 6123
EcoT22I ATGCAT 3 cut(s) 757, 2119, 4108
EcoT38I GRGCYC 5 cut(s) 111, 165, 235, 2741, 4314
ErhI CCWWGG 8 cut(s) 165, 285, 328, 1920, 2375, 4911, 5199, 6123
Esp3I CGTCTC 3 cut(s) 584, 5650, 6399
FalI AAGNNNNNCTT 4 cut(s) 1876, 1908, 2148, 2180
FaqI GGGAC 4 cut(s) 843, 1699, 2112, 3647
FauI CCCGC 3 cut(s) 369, 1540, 3285
FauNDI CATATG 4 cut(s) 1384, 4102, 4700, 5223
FbaI TGATCA 3 cut(s) 3952, 5184, 6391
FblI GTMKAC 4 cut(s) 1201, 1878, 2714, 6114
FriOI GRGCYC 5 cut(s) 111, 165, 235, 2741, 4314
GlaI GCGC 4 cut(s) 3840, 3971, 6705, 6853
GsaI CCCAGC 3 cut(s) 1629, 2455, 5315
GsuI CTGGAG 7 cut(s) 295, 396, 825, 2652, 3483, 3606, 5249
HaeII RGCGCY 1 cut(s) 6855
HapII CCGG 9 cut(s) 104, 242, 671, 2240, 3428, 3800, 4640, 4820, 6423
HgaI GACGC 2 cut(s) 40, 1064
HhaI GCGC 4 cut(s) 3841, 3972, 6706, 6854
Hin1I GRCGYC 2 cut(s) 51, 1056
Hin6I GCGC 4 cut(s) 3839, 3970, 6704, 6852
HinP1I GCGC 4 cut(s) 3839, 3970, 6704, 6852
HincII GTYRAC 4 cut(s) 1054, 2715, 2808, 3220
HindII GTYRAC 4 cut(s) 1054, 2715, 2808, 3220
HindIII AAGCTT 5 cut(s) 4566, 5270, 6596, 6770, 6864
HpaI GTTAAC 2 cut(s) 2808, 3220
HpaII CCGG 9 cut(s) 104, 242, 671, 2240, 3428, 3800, 4640, 4820, 6423
Hpy99I CGWCG 1 cut(s) 4892
HpyCH4IV ACGT 9 cut(s) 15, 1204, 1808, 2536, 2992, 4890, 5392, 5659, 6322
HpySE526I ACGT 9 cut(s) 15, 1204, 1808, 2536, 2992, 4890, 5392, 5659, 6322
Hsp92I GRCGYC 2 cut(s) 51, 1056
HspAI GCGC 4 cut(s) 3839, 3970, 6704, 6852
Kpn2I TCCGGA 1 cut(s) 6422
Ksp22I TGATCA 3 cut(s) 3952, 5184, 6391
KspAI GTTAAC 2 cut(s) 2808, 3220
LguI GCTCTTC 2 cut(s) 153, 347
MabI ACCWGGT 2 cut(s) 1683, 6138
MaeII ACGT 9 cut(s) 15, 1204, 1808, 2536, 2992, 4890, 5392, 5659, 6322
MfeI CAATTG 7 cut(s) 65, 1611, 1794, 2661, 3744, 4350, 4457
MflI RGATCY 8 cut(s) 730, 2781, 3202, 3491, 5240, 6299, 6586, 6726
MlsI TGGCCA 1 cut(s) 4333
MluNI TGGCCA 1 cut(s) 4333
MmeI TCCRAC 4 cut(s) 1571, 3574, 4287, 6496
Mox20I TGGCCA 1 cut(s) 4333
Mph1103I ATGCAT 3 cut(s) 757, 2119, 4108
MroI TCCGGA 1 cut(s) 6422
MroXI GAANNNNTTC 5 cut(s) 427, 4004, 4713, 5685, 6523
MscI TGGCCA 1 cut(s) 4333
MslI CAYNNNNRTG 7 cut(s) 2551, 2691, 3111, 3302, 3383, 4125, 5753
Msp20I TGGCCA 1 cut(s) 4333
MspA1I CMGCKG 2 cut(s) 1247, 6095
MspCI CTTAAG 1 cut(s) 4247
MspI CCGG 9 cut(s) 104, 242, 671, 2240, 3428, 3800, 4640, 4820, 6423
MunI CAATTG 7 cut(s) 65, 1611, 1794, 2661, 3744, 4350, 4457
Mva1269I GAATGC 3 cut(s) 1408, 2682, 4106
MvnI CGCG 1 cut(s) 3991
NciI CCSGG 2 cut(s) 672, 3800
NcoI CCATGG 1 cut(s) 2375
NdeI CATATG 4 cut(s) 1384, 4102, 4700, 5223
NmeAIII GCCGAG 1 cut(s) 6808
NmuCI GTSAC 9 cut(s) 1390, 2325, 2516, 2621, 4891, 4939, 5872, 6323, 6634
NruI TCGCGA 1 cut(s) 3991
NsiI ATGCAT 3 cut(s) 757, 2119, 4108
NspI RCATGY 6 cut(s) 1033, 1783, 2384, 3739, 4186, 5124
OliI CACNNNNGTG 1 cut(s) 4125
PaeI GCATGC 1 cut(s) 2384
PaeR7I CTCGAG 2 cut(s) 3047, 6106
PagI TCATGA 1 cut(s) 478
PciSI GCTCTTC 2 cut(s) 153, 347
PctI GAATGC 3 cut(s) 1408, 2682, 4106
PdmI GAANNNNTTC 5 cut(s) 427, 4004, 4713, 5685, 6523
PflFI GACNNNGTC 1 cut(s) 6329
PfoI TCCNGGA 2 cut(s) 2137, 5676
PinAI ACCGGT 1 cut(s) 4639
Ppu21I YACGTR 2 cut(s) 1205, 6323
PpuMI RGGWCCY 3 cut(s) 830, 2126, 4012
PshAI GACNNNNGTC 1 cut(s) 2523
PshBI ATTAAT 1 cut(s) 1848
PsiI TTATAA 2 cut(s) 2933, 4572
Psp124BI GAGCTC 2 cut(s) 235, 2741
Psp5II RGGWCCY 3 cut(s) 830, 2126, 4012
PspEI GGTNACC 2 cut(s) 1390, 2621
PspFI CCCAGC 3 cut(s) 1625, 2451, 5311
PspPPI RGGWCCY 3 cut(s) 830, 2126, 4012
PsrI GAACNNNNNNTAC 2 cut(s) 2829, 2861
PstNI CAGNNNCTG 4 cut(s) 4772, 5588, 6590, 6764
PsuI RGATCY 8 cut(s) 730, 2781, 3202, 3491, 5240, 6299, 6586, 6726
PsyI GACNNNGTC 1 cut(s) 6329
PvuII CAGCTG 2 cut(s) 1247, 6095
RruI TCGCGA 1 cut(s) 3991
RseI CAYNNNNRTG 7 cut(s) 2551, 2691, 3111, 3302, 3383, 4125, 5753
SacI GAGCTC 2 cut(s) 235, 2741
SalI GTCGAC 1 cut(s) 2713
SapI GCTCTTC 2 cut(s) 153, 347
ScaI AGTACT 5 cut(s) 980, 1263, 3756, 4196, 5451
SexAI ACCWGGT 2 cut(s) 1683, 6138
SfcI CTRYAG 1 cut(s) 4219
Sfr274I CTCGAG 2 cut(s) 3047, 6106
SinI GGWCC 8 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012, 6425
SlaI CTCGAG 2 cut(s) 3047, 6106
SmiMI CAYNNNNRTG 7 cut(s) 2551, 2691, 3111, 3302, 3383, 4125, 5753
SnaBI TACGTA 1 cut(s) 1205
SpeI ACTAGT 1 cut(s) 4984
SphI GCATGC 1 cut(s) 2384
SspI AATATT 6 cut(s) 4145, 4341, 4935, 5075, 5163, 5381
SstI GAGCTC 2 cut(s) 235, 2741
StyI CCWWGG 8 cut(s) 165, 285, 328, 1920, 2375, 4911, 5199, 6123
TaiI ACGT 9 cut(s) 18, 1207, 1811, 2539, 2995, 4893, 5395, 5662, 6325
TauI GCSGC 5 cut(s) 92, 250, 1607, 1919, 4997
TseFI GTSAC 9 cut(s) 1390, 2325, 2516, 2621, 4891, 4939, 5872, 6323, 6634
Tsp45I GTSAC 9 cut(s) 1390, 2325, 2516, 2621, 4891, 4939, 5872, 6323, 6634
TspGWI ACGGA 5 cut(s) 581, 737, 1327, 3202, 5911
Tth111I GACNNNGTC 1 cut(s) 6329
Vha464I CTTAAG 1 cut(s) 4247
VneI GTGCAC 3 cut(s) 1338, 3104, 5083
VpaK11BI GGWCC 8 cut(s) 668, 830, 2126, 2957, 3634, 3884, 4012, 6425
VspI ATTAAT 1 cut(s) 1848
XagI CCTNNNNNAGG 1 cut(s) 6539
XbaI TCTAGA 1 cut(s) 3494
XceI RCATGY 6 cut(s) 1033, 1783, 2384, 3739, 4186, 5124
XcmI CCANNNNNNNNNTGG 4 cut(s) 2404, 3644, 6254, 6365
XhoI CTCGAG 2 cut(s) 3047, 6106
XmiI GTMKAC 4 cut(s) 1201, 1878, 2714, 6114
XmnI GAANNNNTTC 5 cut(s) 427, 4004, 4713, 5685, 6523
ZrmI AGTACT 5 cut(s) 980, 1263, 3756, 4196, 5451
Zsp2I ATGCAT 3 cut(s) 757, 2119, 4108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.