FvH4_6g45230

HEAT repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0002980
Physical Location & Seq
Reverse (-)
34748606 .. 34770042
21437 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g45230.t9

Sequence Viewer

Length: 6912 bp
ATGGCGAAGAAGAACGACCTCAAGGATAACCTCCTCCCGCTCTCTCAGTTCGGCGTCTTGGTCGCGCAATTGGAGTCCATAGTCGCCTCCGCCTCCCAGAAGCCACCGGAGCCTCTCCTCTGCTTCGATCTCCTCTCCGATCTCATCTCCGCCATCTCCGAAGAGCCCAAGGAGTCGATTTTGTTGTGGCAGAGGAAATGCGAGGACGCGCTTTATTCGCTGCTGGTTCTCGGAGCTCGGCGGCCGGTGCGGCATTTGGCTTCAGTGGCAATGGCGAGGGTTATATCCAAGGGAGATAGCATTTCGATATACTCCAGAGCCAGCAGTCTGCAAGGGTTTCTCTCTGATGGGAAGAAGTCCGACCCGCAGAAAGTAGCTGGGGCTGCTCAATGCTTAGGAGAATTATACCGGTATTTTGGTAGGCGAATCACTTCGGGTTTACGTGAAACGACTATGATTGCCACAAAGCTCTTCAAGTTTAATGAGGAATTTGTGAGACAAGAGGCTCTGCATATGCTTCAAAATGCTTTGGAAGGGTCTGGTGGTAGTGCTGCTGCTTCAGCATATACCGAGGCATTTCGTCTCATCATGCGGTTTGCTGTTGGTGATAAATCATTTCTTGTCAGAATCGCTGCTGCAAGATGTTTGAAGGCATTTGCTATTATTGGAGGACCGGGTTTAGGGGTGGGAGAACTTGACAATTCAGCTTCCTTCTGTGTCAAGGCCCTTGAGGATCCTGTTTCATCTGTCCGTGATGCATTTGCTGAAGCATTGGGTTCACTGCTTGCTCTTGGAATGAATCCTGATGCACAGGTTCAACCAAGAGGGAAGGGACCTTTTCCTCCAGCAAAGAAACTAGAAGGTGGTTTGCAAAGGCATTTAGCGTTGCCTTTCACAAAAGCAAGTGGTGCTCGGTCAAAGGATGTGCAAGTTGGCATAACATTGTCTTGGGTGTTCTTCTTACAGGCAATTCGTTTGAAGTACTTGCATCCAGACAGTGAGCTTCAAAACTATGTAATTCAGGTTATGGACATGCTTCGTGCCGATACTTCTGTTGATGCGTACACTCTGGCTTGTGTTCTCTACATCCTTCGTGTTGGTGTTACGGATCAGATGACAGAGCCTACTCAGAGGAGTTTTTTGGTTTTCCTTGGACAGCAGCTTATGTCTCCTGATGCCAGTCCTTCCATGATAATTTCTGGTCTACGTACGGTCTCATATACCCTAAAAACTCTGGGAGAGGTTCCAGTTGAGTTCAAGGAAGTACTTGACAACACCGTTGTTGCAGCAGTATCTCATTCTTCTCAACTTGTACGAATTGAGGCTGCTTTGACATTGCGTGCACTGGCTGAGGTTGATCCCACCTGTGTCGGTGGTTTAATTTCATATGGGGTGACCATGTTGAATGCTTTGAGAGAAAATATAGCATTTGAAAAGGGAAGCACTTTGCAATTAGACCTCGATTCTTTGCATGGGCAAGCTACTGTATTAGCAACTCTGGTGTCCATCTCCCCAAAGTTACCTCTTGGTTATCCCGCTAGGTTGCCCAAATCAATTCTTGAAGTTTCAAAGAAAATGCTGGCTGAATCTAGTCGGAATCCTTTGGCTGCTACAATTGAAAAAGAAGCTGGGTGGTTACTTTTGTCATCTCTATTAGCATCTATGCCGAAGGAGGAGCTTGAAGACCAGGTTTTTGATATTCTTTCCTTGTGGGTGTCCCTTTTTACTGGAAATCCACAAAATGAAACCAACCAAACTGGGGATTTGATATCTAGGATTCGTATGTGGTCTGCTGCCATTGATGCACTTACATCATTTTTAAGATGCTTTCTTTCCCATGATGCTAAGAATAATCGGATTTTGCTTCAACCTGTGCTTGTATACCTAAGTAGGGCTTTATCCTATATTTCACTGATAGCAGCCAAGGAACTGCCAAACGTGAAGCCTGCTCTGAATATATTTATCATTCGGACACTAATAGCTTATCAGTCTCTACCTGATCCAATGGCATATAAGAATGAACACCCCCAGATTATTCTAATTTGTACAAGTCCATTCAGAGAGGCTTTTGGATGTGAAGAAAGTTCATGCTTGAGGTTTCTGTTAGACAAGAGAGATGCTTGGTTAGGTCCCTGGATTCCTGGAAGGGATTGGTTTGAAGATGAACTTCGTGCTTTTCAAGGTGGAAAAGACGGACTTATGCCCTGTGTCTGGGAGAACGAAGTTTCTAGCTTTCCTCAGCCGGAACCAGTAAACAAGACATTGGTGAACCAGATGCTCCTCTGCTTTGGAGTCATGTTTGCGTCTCAGGATAGTGGTGGGATGCTGTCACTTCTTGGAATGATTGAGCAATCTTTGAAAGCTGGAAGAAAGCAACCATGGCATGCAGCTAGTATAACCAATATATGTGTGGGGTTACTTTCAGGATTCAAGGCTTTGCTTTCCTTGCGTTCCCAGCCATTAGCACTTGATATACTAAATTCAGCACAGGCTATATTTCAGAGTATTCTAGCAGAGGGTGACATCTGTCCATCACAACGTAGGGCTGCATCAGAATGTTTAGGCCTTTTAGCTCGTCTTGGAAATGATATCTTTACAGCAAGAATGACTAGATCACTGCTTAGTGACCTAACTGGAGCTACAGATTCAAACTATGCAGGATCTATTGCTTTTGCTCTGGGCTGCATTCATTGCAGTGCAGGAGGCATGGCACTGTCAACATTAGTGCCTTCAACTGTGAGCTCAATATCTTTGCTTGCTAAAAGTTCAATAGCTGGTTTACAGATCTGGTCTTTACACGGACTCCTGTTAACTATAGAAGCTGCTGGCTTGTCCTATGTATCTCAAGTTCAGGCAACACTTGGCCTTGCTTTGGACATTCTTTTGTCTGAAGAGAACGGTTGGGTTGTACTCCAGCAAGGAGTTGGCCGTCTTATAAATGCTATTGTAGCTGTTCTTGGTCCTGAACTTTCCCCTGGAAGTATTTTCTTTTCACGTTGCAAGTCAGTTGTTTCAGAGATAAGCTCTGGCCAAGAAACAGCAACAATGCTTGAGAGTGTTCGCTTTACTCAACAACTTGTACTATTTGCACCACAAGCTGTGTCTGTGCACACCCATGTCCAAACTCTTCTTCCTACTTTGTCCTCAAGACAGCCAGTTTTGAGGCATCTTGCTGTTTCCACTCTCCGGCATCTTATTGAGAAAGATCCAGTATCTGTTGTTGACGAGCAAATAGAAGATAAACTCTTTCAAATGCTTGATGAAGAAACTGATTCCGAGATTGGTGATCTGGTGCGGACCACAATTATGCGATTGCTATATGCATCAAGCCCTTCACGTCCATCTCATTGGATGTCAATATGTCGTAGTGTGGTTCTTGCCACATCAATGAGGAGAAATGCGGATGCTGTTAACGGTTTAGAAAATGATGCCGCGGGTACAGAGGGTGAACCAAGTTTAAATTCTGGAGAAGATGATGATAACATGGTTTCTGGCTCTAAAGGCACACCCCAGTTTATTCCCAGCAGGGACAAACACCTCAGATATCGGACAAGAGTTTTTGCTGCTGAGTGTTTGAGTTACCTACCTGGAGCTGTTGGAAAGAATCCAGCTCATTTTGATCTCGGTTTGGCTAGGGACCAATCCACTAATGGACGGGCCTCTGGTGAATGGCTTGTCCTCCATATCCAAGAACTTATAGCACTTGCTTATCAGATAAGCACGATCCAGTTTGAAAACCTGCAGCCAATTGGTGTATTACTTCTGAGTACAATTATAGACAAGTTTGAGAGGACTCCTGACCCAGAGCTTCCAGGGCACCTCCTGCTGGAACAGTATCAGGCGCAACTAGTGTCTGCTGTCCGCACTGCCTTAGACTCATCCTCTGGTCCTATTCTTTTGGAAGCAGGCTTCCAGTTGGCTACAAAGATATTCACAAGTGGAATAATTGAGGGTCATCAGATTGCTGTTAAGCGCATATATTCTTTGATTTCACGACCATTGAATGACTTCAAGGACCTTTATTATCCTTCATTTGCAGAATGGGTCTCGTGCAAGATTAAGATAAGACTACTCGCTGCCCATGCCTCTCTTAAATGTCACACATATGCATTCTTGAGGAGACACCAAACTGGGGTTCCAGATGAATATTTAGCACTGTTACCATTATTTTCAAAGAGTTCAGACATACTTGGGAAGTACTGGATTAGAGTTTTGAAGGACTACAGCTATATTTGCTTGTGCGTGCATCTTAAGGCCAAGTGGAATCCTTTTCTTGATGGAATTCAATCACCTCTGGTATCCTCAAAGTTGCAGCAGTGCTTGGAAGAATCCTGGCCAGTAATAATGCAGGCAATTGCATTGGATGCAGTTCCTGTGAATTTTGAAGAGAACGAATATTCAAAACCCCCTAATGAAACCACATCAAAAAATTGCTTATTGTCTGGACATAGTATGGTTCAACTGGAATCTGAAGACTATCAGTTTCTCTGGGGATTCGCTTTGCTTGTTTTATTTCAGGGGCAAAATTCAACCCCCAGTGGAATGAAAAATCCAGTTTCTTTTGTGAAAGCTTATAACGGGGGAGATCCATCCAGTGAAGAATTGTCTTCCTCTGGATTTAAGTTATATGAAATTGTATTGCCGGTCTTCCAGTTTCTGTCCACCAAAAGGTTTGCCAATGCAGGATATCTCACTATGGACATATGCAGTGAATTGCTTCAGGTTTTCTCTTATTCTATGTGCATGGACAATTCATGGGATACTCTTTCGGTGTCTGTTCTATCACAGATTGTGCAGAATTGCCCTGAAACATTTTACGAATCGGAAAAGTTTGCTTATCTGGCAATGGAACTCTGCTTGACTTACCTCTACAAAGTGTTTCAAAGTGCCGAGGCAATATCTGTGGATAAATCCTGGGAGGATTTGATATCCTCAATACTTGTCACCGCAAAAACCCTTGTGAACTGTTATCAACCAAAGAAACAACTGGTATCTGCGGCATTGGCGTTTCTTTTAATTGGTTACAAGGGAATCAGAGAAGTCTCTACTGGCTTTTGCTTCTCCAAACTTGATGAATATTTCAAGTGCACGAGTCTCTTATTGAAAAGATATATTGATGATATTTGCAGTGTTGGTGATGATGGTATTCTTCAGACGAGAAAAATATTGGGAACTTGTCTGAATGTGATCACTAATTTGACCGTGGACTGCATCAAGTGTATTCAGATGCTGGAAAATAAGAGATCTGAATTGCATACATTACTGCAAACAAAGCTTGCCTTCTCTCTTGAACAAACTATATCATTTGCCAAGCTGGCTTATCAGATAGATTATCTTGGAGATAATACAGATCGTGATTCAATCTATTATGGTATGTTTAAATATTGCACCAGATGTGTCCAAACTGTACTCACCGATTCAAGTTTACAGGTTCAAGAAATTGGGTTGCTAGTACTAAGACACTTGATTCAGAAAGGCACAAATGTGGAGGATGACACTTTCTTAATGCTTTTTGTTGGGGAACTTGCTAGTGATTTTTTCCTGATAATGCAGAATATGTTAAAGAAACCTGTAACCGAAAAAGCTGCATCTGTTGCTGGTGAATGTTTAGGACTTTTGGTGCTTCTGCAAACATCATCAAAATCTAGCGAATGTCAGAGAGGTTTTATGAATTTGCTCCTGGAAGCTGTTCTCGTGGTTTTCAAGGCTTCAGAAGAAGGTTTTTCTCAGGAAGTCAATAAACTAAGGAGCACTGCTGTGAGACTTGTTTCTCATCTTGCTCAAGTTCCTTCCTCAGCAGTTCACTTCAAGGACGTGTTGCTGTCTATGCCTCCGACTCACCGACAGCAATTTCAGGGGTTTATTCGTGCTTCTGTGACTCAAGAGCATAATGCAACACAGATGAAGCCCACAACTCCATTTTTGGAGATAAAATTACCGGTGCCAGCAATGGTAAGTAAAGAGATGCGGCCTCCAGCACCAGCCACTACATCACATTCTCCTGTCTCTGATCATCAAAGAGATGAAGAGGAGAAAGAGGATGAAGATGAAGATGAAGATGATTGGGATGCTTTTCAGTCTTTTCCTGCCACTACAAGCGCAGCTGAAAATGACTCAAGAGTAGACAGTGCCTTGGAAACACCCGACCCGGTTGAGAACTCGTCTATTTCGGAAGTGAATACAGAGAGTGATCAATTTCATGGAGATTCTGTTTCCCGACCTCTCAACAACGTAGAGGCGACTAGCAAGGCAGATCATCAAGAGGCTGGCAAAGCTGAGGTGATATCTGAATCCCCCGATGATCTGACATCCTCACAGGGTAATATACTAGGTCACAATGTTGAGACAGAAGAACCCCATGATTTCCAATCTTTTAGTGGTGTTATCGAGGTATGTGATGATTGGAAGGAAAGAGACGATAAAATGTCCGGACCTGAAGAGGGAAAGGGAGCAGGGTTGAACCAAGACACTGAACATAGAACATCTGAACTGCATTCTATTGAAGATGCTCAAGGATTGGCCGGATTGAATTCTACACACCATGAGCAGGGAAAGGAGAACACTGATAATAGACCAGTGCAATCATCATCAGATCGTGTAAAGCATGAGGAAGTAAAGGGAGCAGGGTCGAACCAAGTTACAGAACACAGACCGTCTGAACATCATCCTGTCGAAGAAGATGCTCAAGGATTGGCCGGATTGAATTCAGCACAACATGAGCAGGTAAAGGAGAGCCCTGAAAATAGACCAGTGCAATCATCATCAGATCCTGTACTTGACGAGGAAGTAAAGGATAAAAGAGAAGATAAAGAAGAGCCGGCAAGGGAAGAGTCTAAGCTCCAACAACACGAAGAGAGCAGCAAAGTTCAAGATTTAGTAAAAAACAAAGATGATGCTGAGAAATCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2304

Amino Acids

253.63

Weight (kDa)

5.23

Isoelectric Point (pI)

47.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Laa1_Sip1_HTR5 PF20210 758 - 943 8.1e-44 Laa1/Sip1/HEATR5 HEAT repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2936, 4575
Acc36I ACCTGC 2 cut(s) 3747, 6712
AccB1I GGYRCC 2 cut(s) 3816, 5941
AccBSI CCGCTC 1 cut(s) 40
AccI GTMKAC 3 cut(s) 1204, 1881, 6123
AccII CGCG 3 cut(s) 65, 209, 3434
AccIII TCCGGA 1 cut(s) 6428
AcoI YGGCCR 6 cut(s) 242, 2926, 3028, 4334, 6519, 6693
AcsI RAATTY 9 cut(s) 488, 2479, 3460, 4281, 4378, 4525, 5671, 6529, 6703
AcuI CTGAAG 9 cut(s) 246, 543, 786, 2910, 4491, 4703, 5135, 5694, 6456
AcyI GRCGYC 1 cut(s) 54
AflII CTTAAG 1 cut(s) 4250
AflIII ACRYGT 1 cut(s) 5814
AgeI ACCGGT 2 cut(s) 408, 5938
AhlI ACTAGT 1 cut(s) 3847
AjiI CACGTC 2 cut(s) 3338, 5815
AjnI CCWGG 9 cut(s) 1686, 2132, 2140, 2974, 3586, 3811, 4331, 4913, 5679
AjuI GAANNNNNNNTTGG 6 cut(s) 3114, 3146, 3445, 3477, 4119, 4151
AleI CACNNNNGTG 2 cut(s) 5483, 5756
Alw21I GWGCWC 7 cut(s) 238, 913, 1345, 2744, 3111, 5090, 5753
Alw44I GTGCAC 3 cut(s) 1341, 3107, 5086
AlwNI CAGNNNCTG 5 cut(s) 3215, 4373, 4657, 5230, 6770
Aor13HI TCCGGA 1 cut(s) 6428
ApaLI GTGCAC 3 cut(s) 1341, 3107, 5086
ApoI RAATTY 9 cut(s) 488, 2479, 3460, 4281, 4378, 4525, 5671, 6529, 6703
ArsI GACNNNNNNTTYG 2 cut(s) 1676, 1708
AsiGI ACCGGT 2 cut(s) 408, 5938
Asp700I GAANNNNTTC 4 cut(s) 430, 4007, 4716, 5688
AspLEI GCGC 5 cut(s) 67, 211, 3844, 3975, 6101
AsuC2I CCSGG 2 cut(s) 675, 6149
AvaII GGWCC 9 cut(s) 671, 833, 2129, 2960, 3297, 3637, 3887, 4015, 6431
BaeGI GKGCMC 4 cut(s) 1345, 3111, 3819, 5090
BaeI ACNNNNGTAYC 2 cut(s) 1038, 1071
BalI TGGCCA 2 cut(s) 3030, 4336
BamHI GGATCC 1 cut(s) 733
BanI GGYRCC 2 cut(s) 3816, 5941
BanII GRGCYC 4 cut(s) 168, 238, 2744, 6737
BauI CACGAG 3 cut(s) 4048, 5089, 5693
BbsI GAAGAC 4 cut(s) 1689, 4479, 4599, 4639
Bbv12I GWGCWC 7 cut(s) 238, 913, 1345, 2744, 3111, 5090, 5753
BbvCI CCTCAGC 4 cut(s) 1350, 2238, 5794, 6276
BccI CCATC 8 cut(s) 161, 341, 1514, 2539, 3349, 4271, 4597, 5135
BceAI ACGGC 1 cut(s) 2913
BcgI CGANNNNNNTGC 4 cut(s) 5567, 5601, 6662, 6696
BciT130I CCWGG 9 cut(s) 1688, 2134, 2142, 2976, 3588, 3813, 4333, 4915, 5681
BciVI GTATCC 2 cut(s) 4309, 4753
BclI TGATCA 3 cut(s) 5187, 6010, 6190
BcnI CCSGG 2 cut(s) 675, 6149
BcuI ACTAGT 1 cut(s) 3847
BfmI CTRYAG 4 cut(s) 2640, 2814, 3740, 4222
BfrI CTTAAG 1 cut(s) 4250
BfuAI ACCTGC 2 cut(s) 3747, 6712
BfuI GTATCC 2 cut(s) 4309, 4753
BglI GCCNNNNNGGC 2 cut(s) 250, 5315
BglII AGATCT 2 cut(s) 2784, 5243
BmcAI AGTACT 4 cut(s) 983, 1266, 4199, 5454
Bme18I GGWCC 9 cut(s) 671, 833, 2129, 2960, 3297, 3637, 3887, 4015, 6431
BmgBI CACGTC 2 cut(s) 3338, 5815
BmrI ACTGGG 4 cut(s) 1767, 3505, 4140, 4530
BmuI ACTGGG 4 cut(s) 1767, 3505, 4140, 4530
BoxI GACNNNNGTC 1 cut(s) 2526
BpiI GAAGAC 4 cut(s) 1689, 4479, 4599, 4639
BplI GAGNNNNNCTC 2 cut(s) 3008, 3040
BpmI CTGGAG 7 cut(s) 298, 828, 2655, 2897, 3486, 3609, 5958
Bpu10I CCTNAGC 5 cut(s) 394, 1350, 2238, 5794, 6276
BpuMI CCSGG 2 cut(s) 675, 6149
BsaAI YACGTR 2 cut(s) 443, 1208
BsaHI GRCGYC 1 cut(s) 54
BsaI GGTCTC 2 cut(s) 1219, 4051
BsaWI WCCGGW 4 cut(s) 106, 408, 5938, 6428
BsaXI ACNNNNNCTCC 4 cut(s) 2787, 2817, 6195, 6225
Bse118I RCCGGY 5 cut(s) 244, 408, 4642, 5938, 6817
Bse3DI GCAATG 5 cut(s) 276, 1334, 2689, 4851, 5955
BseAI TCCGGA 1 cut(s) 6428
BseBI CCWGG 9 cut(s) 1688, 2134, 2142, 2976, 3588, 3813, 4333, 4915, 5681
BseMI GCAATG 5 cut(s) 276, 1334, 2689, 4851, 5955
BseRI GAGGAG 9 cut(s) 23, 107, 122, 1147, 1688, 2270, 3406, 4132, 6044
BseSI GKGCMC 4 cut(s) 1345, 3111, 3819, 5090
BseX3I CGGCCG 1 cut(s) 242
BseYI CCCAGC 4 cut(s) 377, 1628, 2454, 3521
BsgI GTGCAG 2 cut(s) 2718, 4814
Bsh1236I CGCG 3 cut(s) 65, 209, 3434
Bsh1285I CGRYCG 1 cut(s) 245
BshNI GGYRCC 2 cut(s) 3816, 5941
BshTI ACCGGT 2 cut(s) 408, 5938
BsiEI CGRYCG 1 cut(s) 245
BsiHKAI GWGCWC 7 cut(s) 238, 913, 1345, 2744, 3111, 5090, 5753
BsiWI CGTACG 1 cut(s) 1208
BslFI GGGAC 5 cut(s) 846, 1702, 2115, 3542, 3650
BsmBI CGTCTC 3 cut(s) 587, 2310, 6408
BsmFI GGGAC 5 cut(s) 846, 1702, 2115, 3542, 3650
BsmI GAATGC 4 cut(s) 1411, 2685, 4109, 6493
Bso31I GGTCTC 2 cut(s) 1219, 4051
Bsp13I TCCGGA 1 cut(s) 6428
Bsp1407I TGTACA 1 cut(s) 2045
Bsp19I CCATGG 1 cut(s) 2378
BspEI TCCGGA 1 cut(s) 6428
BspFNI CGCG 3 cut(s) 65, 209, 3434
BspMAI CTGCAG 1 cut(s) 3744
BspMI ACCTGC 2 cut(s) 3747, 6712
BspQI GCTCTTC 3 cut(s) 156, 476, 6807
BspT107I GGYRCC 2 cut(s) 3816, 5941
BspTI CTTAAG 1 cut(s) 4250
BspTNI GGTCTC 2 cut(s) 1219, 4051
BsrBI CCGCTC 1 cut(s) 40
BsrDI GCAATG 5 cut(s) 276, 1334, 2689, 4851, 5955
BsrFI RCCGGY 5 cut(s) 244, 408, 4642, 5938, 6817
BsrGI TGTACA 1 cut(s) 2045
BssAI RCCGGY 5 cut(s) 244, 408, 4642, 5938, 6817
BssNAI GTATAC 1 cut(s) 1882
BssNI GRCGYC 1 cut(s) 54
BssSI CACGAG 3 cut(s) 4048, 5089, 5693
BssT1I CCWWGG 6 cut(s) 168, 288, 1150, 1923, 2378, 6132
Bst1107I GTATAC 1 cut(s) 1882
Bst2BI CACGAG 3 cut(s) 4048, 5089, 5693
Bst2UI CCWGG 9 cut(s) 1688, 2134, 2142, 2976, 3588, 3813, 4333, 4915, 5681
BstACI GRCGYC 1 cut(s) 54
BstAFI CTTAAG 1 cut(s) 4250
BstAPI GCANNNNNTGC 5 cut(s) 908, 2691, 3823, 4364, 5594
BstAUI TGTACA 1 cut(s) 2045
BstBAI YACGTR 2 cut(s) 443, 1208
BstDSI CCRYGG 3 cut(s) 2378, 3432, 5202
BstEII GGTNACC 1 cut(s) 1393
BstFNI CGCG 3 cut(s) 65, 209, 3434
BstHHI GCGC 5 cut(s) 67, 211, 3844, 3975, 6101
BstMCI CGRYCG 1 cut(s) 245
BstNI CCWGG 9 cut(s) 1688, 2134, 2142, 2976, 3588, 3813, 4333, 4915, 5681
BstNSI RCATGY 2 cut(s) 1036, 2387
BstPAI GACNNNNGTC 1 cut(s) 2526
BstPI GGTNACC 1 cut(s) 1393
BstSFI CTRYAG 4 cut(s) 2640, 2814, 3740, 4222
BstSLI GKGCMC 4 cut(s) 1345, 3111, 3819, 5090
BstSNI TACGTA 1 cut(s) 1208
BstUI CGCG 3 cut(s) 65, 209, 3434
BstV2I GAAGAC 4 cut(s) 1689, 4479, 4599, 4639
BstX2I RGATCY 7 cut(s) 733, 2660, 2784, 3205, 4585, 5243, 6766
BstXI CCANNNNNNTGG 1 cut(s) 3348
BstYI RGATCY 7 cut(s) 733, 2660, 2784, 3205, 4585, 5243, 6766
BstZ17I GTATAC 1 cut(s) 1882
BstZI CGGCCG 1 cut(s) 242
BsuI GTATCC 2 cut(s) 4309, 4753
BtgI CCRYGG 3 cut(s) 2378, 3432, 5202
BtrI CACGTC 2 cut(s) 3338, 5815
BtsI GCAGTG 8 cut(s) 779, 2615, 2701, 3864, 4322, 4714, 5134, 5751
BveI ACCTGC 2 cut(s) 3747, 6712
CaiI CAGNNNCTG 5 cut(s) 3215, 4373, 4657, 5230, 6770
CfoI GCGC 5 cut(s) 67, 211, 3844, 3975, 6101
Cfr10I RCCGGY 5 cut(s) 244, 408, 4642, 5938, 6817
Cfr42I CCGCGG 1 cut(s) 3435
CseI GACGC 3 cut(s) 43, 215, 2292
CsiI ACCWGGT 1 cut(s) 1686
CspAI ACCGGT 2 cut(s) 408, 5938
CspCI CAANNNNNGTGG 2 cut(s) 4884, 4919
DraI TTTAAA 2 cut(s) 3459, 5380
EaeI YGGCCR 6 cut(s) 242, 2926, 3028, 4334, 6519, 6693
EagI CGGCCG 1 cut(s) 242
EciI GGCGGA 2 cut(s) 79, 139
Ecl136II GAGCTC 2 cut(s) 236, 2742
EclXI CGGCCG 1 cut(s) 242
Eco105I TACGTA 1 cut(s) 1208
Eco130I CCWWGG 6 cut(s) 168, 288, 1150, 1923, 2378, 6132
Eco147I AGGCCT 1 cut(s) 2565
Eco24I GRGCYC 4 cut(s) 168, 238, 2744, 6737
Eco31I GGTCTC 2 cut(s) 1219, 4051
Eco32I GATATC 6 cut(s) 1770, 2590, 3545, 4688, 4929, 6285
Eco47I GGWCC 9 cut(s) 671, 833, 2129, 2960, 3297, 3637, 3887, 4015, 6431
Eco52I CGGCCG 1 cut(s) 242
Eco53kI GAGCTC 2 cut(s) 236, 2742
Eco57I CTGAAG 9 cut(s) 246, 543, 786, 2910, 4491, 4703, 5135, 5694, 6456
Eco91I GGTNACC 1 cut(s) 1393
EcoICRI GAGCTC 2 cut(s) 236, 2742
EcoO109I RGGNCCY 4 cut(s) 724, 833, 2129, 4015
EcoO65I GGTNACC 1 cut(s) 1393
EcoRI GAATTC 3 cut(s) 4281, 6529, 6703
EcoRII CCWGG 9 cut(s) 1686, 2132, 2140, 2974, 3586, 3811, 4331, 4913, 5679
EcoRV GATATC 6 cut(s) 1770, 2590, 3545, 4688, 4929, 6285
EcoT14I CCWWGG 6 cut(s) 168, 288, 1150, 1923, 2378, 6132
EcoT22I ATGCAT 3 cut(s) 760, 3325, 4111
EcoT38I GRGCYC 4 cut(s) 168, 238, 2744, 6737
ErhI CCWWGG 6 cut(s) 168, 288, 1150, 1923, 2378, 6132
Esp3I CGTCTC 3 cut(s) 587, 2310, 6408
FalI AAGNNNNNCTT 8 cut(s) 1879, 1911, 2151, 2183, 2181, 2213, 5264, 5296
FaqI GGGAC 5 cut(s) 846, 1702, 2115, 3542, 3650
FauI CCCGC 4 cut(s) 45, 372, 1543, 3427
FauNDI CATATG 4 cut(s) 513, 1387, 4105, 4703
FbaI TGATCA 3 cut(s) 5187, 6010, 6190
FblI GTMKAC 3 cut(s) 1204, 1881, 6123
FriOI GRGCYC 4 cut(s) 168, 238, 2744, 6737
GlaI GCGC 5 cut(s) 66, 210, 3843, 3974, 6100
GsaI CCCAGC 4 cut(s) 381, 1632, 2458, 3525
GsuI CTGGAG 7 cut(s) 298, 828, 2655, 2897, 3486, 3609, 5958
HgaI GACGC 3 cut(s) 43, 215, 2292
HhaI GCGC 5 cut(s) 67, 211, 3844, 3975, 6101
Hin1I GRCGYC 1 cut(s) 54
Hin6I GCGC 5 cut(s) 65, 209, 3842, 3973, 6099
HinP1I GCGC 5 cut(s) 65, 209, 3842, 3973, 6099
HincII GTYRAC 4 cut(s) 2718, 2811, 3223, 3412
HindII GTYRAC 4 cut(s) 2718, 2811, 3223, 3412
HindIII AAGCTT 2 cut(s) 4569, 5273
HpaI GTTAAC 2 cut(s) 2811, 3412
HpyCH4IV ACGT 8 cut(s) 442, 1207, 1938, 2539, 2995, 3337, 5814, 6231
HpySE526I ACGT 8 cut(s) 442, 1207, 1938, 2539, 2995, 3337, 5814, 6231
Hsp92I GRCGYC 1 cut(s) 54
HspAI GCGC 5 cut(s) 65, 209, 3842, 3973, 6099
Kpn2I TCCGGA 1 cut(s) 6428
KroI GCCGGC 1 cut(s) 6817
KroNI GCCGGC 1 cut(s) 6819
Ksp22I TGATCA 3 cut(s) 5187, 6010, 6190
KspAI GTTAAC 2 cut(s) 2811, 3412
KspI CCGCGG 1 cut(s) 3435
LguI GCTCTTC 3 cut(s) 156, 476, 6807
MabI ACCWGGT 1 cut(s) 1686
MaeII ACGT 8 cut(s) 442, 1207, 1938, 2539, 2995, 3337, 5814, 6231
MbiI CCGCTC 1 cut(s) 40
MfeI CAATTG 4 cut(s) 68, 1614, 3747, 4353
MflI RGATCY 7 cut(s) 733, 2660, 2784, 3205, 4585, 5243, 6766
MlsI TGGCCA 2 cut(s) 3030, 4336
MluNI TGGCCA 2 cut(s) 3030, 4336
MmeI TCCRAC 5 cut(s) 384, 1574, 3577, 5858, 6865
Mox20I TGGCCA 2 cut(s) 3030, 4336
Mph1103I ATGCAT 3 cut(s) 760, 3325, 4111
MroI TCCGGA 1 cut(s) 6428
MroNI GCCGGC 1 cut(s) 6817
MroXI GAANNNNTTC 4 cut(s) 430, 4007, 4716, 5688
MscI TGGCCA 2 cut(s) 3030, 4336
MslI CAYNNNNRTG 8 cut(s) 2554, 2694, 3114, 3305, 3386, 4104, 5483, 5756
Msp20I TGGCCA 2 cut(s) 3030, 4336
MspA1I CMGCKG 2 cut(s) 3434, 6104
MspCI CTTAAG 1 cut(s) 4250
MunI CAATTG 4 cut(s) 68, 1614, 3747, 4353
Mva1269I GAATGC 4 cut(s) 1411, 2685, 4109, 6493
MvaI CCWGG 9 cut(s) 1688, 2134, 2142, 2976, 3588, 3813, 4333, 4915, 5681
MvnI CGCG 3 cut(s) 65, 209, 3434
NaeI GCCGGC 1 cut(s) 6819
NciI CCSGG 2 cut(s) 675, 6149
NcoI CCATGG 1 cut(s) 2378
NdeI CATATG 4 cut(s) 513, 1387, 4105, 4703
NgoMIV GCCGGC 1 cut(s) 6817
NmeAIII GCCGAG 2 cut(s) 217, 4915
NmuCI GTSAC 8 cut(s) 1393, 2328, 2519, 2624, 4097, 4942, 5875, 6332
NsiI ATGCAT 3 cut(s) 760, 3325, 4111
NspI RCATGY 2 cut(s) 1036, 2387
OliI CACNNNNGTG 2 cut(s) 5483, 5756
PaeI GCATGC 1 cut(s) 2387
PceI AGGCCT 1 cut(s) 2565
PciSI GCTCTTC 3 cut(s) 156, 476, 6807
PctI GAATGC 4 cut(s) 1411, 2685, 4109, 6493
PdiI GCCGGC 1 cut(s) 6819
PdmI GAANNNNTTC 4 cut(s) 430, 4007, 4716, 5688
Pfl23II CGTACG 1 cut(s) 1208
PfoI TCCNGGA 2 cut(s) 2140, 5679
PinAI ACCGGT 2 cut(s) 408, 5938
Ppu21I YACGTR 2 cut(s) 443, 1208
PpuMI RGGWCCY 3 cut(s) 833, 2129, 4015
PshAI GACNNNNGTC 1 cut(s) 2526
PsiI TTATAA 2 cut(s) 2936, 4575
Psp124BI GAGCTC 2 cut(s) 238, 2744
Psp5II RGGWCCY 3 cut(s) 833, 2129, 4015
Psp6I CCWGG 9 cut(s) 1686, 2132, 2140, 2974, 3586, 3811, 4331, 4913, 5679
PspEI GGTNACC 1 cut(s) 1393
PspFI CCCAGC 4 cut(s) 377, 1628, 2454, 3521
PspGI CCWGG 9 cut(s) 1686, 2132, 2140, 2974, 3586, 3811, 4331, 4913, 5679
PspLI CGTACG 1 cut(s) 1208
PspPPI RGGWCCY 3 cut(s) 833, 2129, 4015
PsrI GAACNNNNNNTAC 2 cut(s) 2832, 2864
PstI CTGCAG 1 cut(s) 3744
PstNI CAGNNNCTG 5 cut(s) 3215, 4373, 4657, 5230, 6770
PsuI RGATCY 7 cut(s) 733, 2660, 2784, 3205, 4585, 5243, 6766
PvuII CAGCTG 1 cut(s) 6104
RseI CAYNNNNRTG 8 cut(s) 2554, 2694, 3114, 3305, 3386, 4104, 5483, 5756
SacI GAGCTC 2 cut(s) 238, 2744
SacII CCGCGG 1 cut(s) 3435
SapI GCTCTTC 3 cut(s) 156, 476, 6807
ScaI AGTACT 4 cut(s) 983, 1266, 4199, 5454
SexAI ACCWGGT 1 cut(s) 1686
SfcI CTRYAG 4 cut(s) 2640, 2814, 3740, 4222
Sfr303I CCGCGG 1 cut(s) 3435
SgrBI CCGCGG 1 cut(s) 3435
SinI GGWCC 9 cut(s) 671, 833, 2129, 2960, 3297, 3637, 3887, 4015, 6431
SmiMI CAYNNNNRTG 8 cut(s) 2554, 2694, 3114, 3305, 3386, 4104, 5483, 5756
SnaBI TACGTA 1 cut(s) 1208
SpeI ACTAGT 1 cut(s) 3847
SphI GCATGC 1 cut(s) 2387
SseBI AGGCCT 1 cut(s) 2565
SspI AATATT 5 cut(s) 4148, 4397, 5078, 5166, 5384
SstI GAGCTC 2 cut(s) 238, 2744
StuI AGGCCT 1 cut(s) 2565
StyI CCWWGG 6 cut(s) 168, 288, 1150, 1923, 2378, 6132
TaiI ACGT 8 cut(s) 445, 1210, 1941, 2542, 2998, 3340, 5817, 6234
TaqI TCGA 7 cut(s) 126, 176, 305, 1461, 6387, 6629, 6672
TaqII GACCGA 1 cut(s) 903
TauI GCSGC 5 cut(s) 244, 253, 3434, 5000, 5971
TseFI GTSAC 8 cut(s) 1393, 2328, 2519, 2624, 4097, 4942, 5875, 6332
Tsp45I GTSAC 8 cut(s) 1393, 2328, 2519, 2624, 4097, 4942, 5875, 6332
TspGWI ACGGA 4 cut(s) 740, 1121, 2208, 2814
Vha464I CTTAAG 1 cut(s) 4250
VneI GTGCAC 3 cut(s) 1341, 3107, 5086
VpaK11BI GGWCC 9 cut(s) 671, 833, 2129, 2960, 3297, 3637, 3887, 4015, 6431
XapI RAATTY 9 cut(s) 488, 2479, 3460, 4281, 4378, 4525, 5671, 6529, 6703
XceI RCATGY 2 cut(s) 1036, 2387
XcmI CCANNNNNNNNNTGG 4 cut(s) 2407, 2921, 3647, 6374
XmiI GTMKAC 3 cut(s) 1204, 1881, 6123
XmnI GAANNNNTTC 4 cut(s) 430, 4007, 4716, 5688
ZrmI AGTACT 4 cut(s) 983, 1266, 4199, 5454
Zsp2I ATGCAT 3 cut(s) 760, 3325, 4111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.