Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0004664

Physical Location & Seq

Genomic Coordinates Reverse (-)

82097138 .. 82101094

Gene Structure 3957 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG588300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGAAGAGAGACCGAAGAAGCTACTCATTCTCTACGCCACTCAAACCGGAAACGCGTTAGACGCCGCCGAGAGAATGGGCCGCGAAGCAGAGCGCAGAGGCTGTTCCGTCCACCTTCTCTCCCTCGACCAATACGACGCCAGTTGCTTGCCTCAGGAGGGCGCTGTAATTTTCGTTGTTTCTACCACAGGCCAGGGTGACACTCCCGATTCCATGAAGGGATTCTGGAAATATCTATTGCAGAGAAATCTAAGTAGGCAATGGCTGGAGGGACTTAACTATGCTGTTTTTGGATTGGGTGATTCTGGTTACCAAAAATTTAATTTTGTTGCGAAGAAGCTTGACAGAAGACTTTTGGATCTCGGGGCAACCCCTATTGTGGAAAGAGGTTTAGGAGATGATCAGCACCCATCAGGATATGAAGCTGCTCTGGATCCTTGGATGGCATCTTTGTGGAACATGTTGAAAACAATCAATTCCAAATACTTCCCGAGTGGCCCAGACTTTTTGATTCCATATGAGAATTTGATTGCTCAACCGAAAATTCGGATTATGTATCATGACATTGACAAAGTGGATTCACAACTTTCAACTGGTTCGGACTTGAATCACATTGAGTTGCAGATTGAAAGAGCTCGCAAAATGTCTGCTGTAAAGTATTCTCTTGACAAGAATAGGCCTGACTGCCTTCTTAAATTGGTCAAGAATCAACCATTGACTAAATCAAGTAGTAAAGATAAAGAGGTGCATCACTTCGAATTTGAATTTGTTTCATCTGCTATTGAATATGAAGTCGGTGACGTCCTTGAGGTTCTCCCGAGTCAAAATCCTGCTGCAGTAGATGCTTTCCTTCTTCGTTGTAATTTGGACCCTGAAGCATTCATCACTGTCCATCCTTTAGAGACGGAGAATCAGCTTCTTGATACTCAAGTTCCCATCAAATTAAAAACTTTTGTTGAGTTGACAATGGATGTTGCTTCAGCTTCCCCTAGACGTTATTTCTTTGAGGTCATGAGTATGTTTGCAACAGCTGAGCATGAAAAGGAAAGACTTCAGTATTTTGTGTCACCTGAAGGAAGAGATGACCTATATCAATACAATCAGAGGGAACGAAGGACTGTTCTGGAGGTATTAGATGATTTCCCCTCTGTTCAAATGCCATTTGAATGGCTGGTACAGTTGGTTCCTCCTTTGAAAACGAGGGCTTTCTCCATCTCCTCCTCCCCTTCGGTTCACCCTAATCAAGTGCACTTAACAGTGAGTGTAGTATTATGGACAACACCTTTCAAAAGAAATCGAGCAGGTCTTTGCTCAAGTTGGCTAGCCAAGCTTGATCCTGAACAACGTGTTCATGTTCCAGTGTGGTTCCAGAAAGGCTCCCTTCGTCCCCCACCACCATCACTTCCTCTTATTCTCGTTGGACCTGGAACTGGATGTGCGCCCTTTCGTGGATTCATTGAGGAAAGAGCCATACAAAGTTTGACTGGGTCTACTGCTCCAGTCATGTTCTTTTTTGGATGCAGAAATGAAGACAATGATTTCTTATACAAAGAGTTTTGGTTATCTCATTCGCAAAACAACGGGGTACTTTCAGAAGCGAAGGGTGGAGGCTTTTATGTTGCCTTCTCAAGAGACCAGCCACAGAAAGTCTATGTGCAGCATAAGATGCGGGAACATAGCCACAGGGTGTGGAATTTGCTTAGTGAGGGGGCTGCAATCTATGTAGCTGGTTCTTCGACAAAAATGCCCTCAGATGTATTATTAGCGTTTGAGGAAATTATCTCCAAAGAAAGTGGACTTCCTCAGGAATCTGCAGTCAGATGGCTTAGGGCTCTGGAAAAGGCTGGCAAATACCATGTTGAAGCATGGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010154 GO:0016491 GO:0016651 GO:0022414 GO:0032501 GO:0032502 GO:0035690 GO:0036245 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0055114 GO:0061458 GO:0070887 GO:0071310 GO:1901654 GO:1901655 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

624

Amino Acids

70.79

Weight (kDa)

6.1

Isoelectric Point (pI)

47.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	10 - 147	4.2e-37	Flavodoxin
FAD_binding_1	PF00667	229 - 440	6.7e-48	FAD binding domain
NAD_binding_1	PF00175	472 - 582	9.2e-11	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004664)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02280 AT3G02280 AT3G02280
fragaria_vesca	FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220
malus_domestica	MD09G1086400.v1.1 MD09G1086700.v1.1 MD09G1087200.v1.1 MD12G1122800.v1.1
prunus_persica	Prupe.3G238300_v2.0.a1 Prupe.3G238300_v2.0.a1
pyrus_communis	pycom09g01200 pycom09g01250 pycom09g01260 pycom12g12160
rosa_chinensis	RchiOBHm_Chr2g0162931
rosa_laevigata	RLG00000021362
rosa_multiflora	Rmu_sc0006129.1_g000002 Rmu_sc0036821.1_g000001
rosa_roxburghii	Rroxscaffold_2G00087700
rosa_rugosa	Rorug02G0499400
rosa_samantha	Rh2AG565400 Rh2BG578100 Rh2CG547800 Rh2DG588300
rosa_wichuraiana	Rw2G046800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	804
Acc36I	ACCTGC	1 cut(s)	1292
AccI	GTMKAC	1 cut(s)	1490
AccII	CGCG	2 cut(s)	56, 84
AciI	CCGC	3 cut(s)	66, 82, 1669
AclWI	GGATC	4 cut(s)	366, 428, 441, 1328
AcsI	RAATTY	6 cut(s)	317, 523, 543, 758, 764, 1693
AcuI	CTGAAG	4 cut(s)	894, 963, 1037, 1092
AcyI	GRCGYC	3 cut(s)	63, 138, 801
AdeI	CACNNNGTG	1 cut(s)	1687
AfaI	GTAC	2 cut(s)	1176, 1587
AfiI	CCNNNNNNNGG	4 cut(s)	158, 379, 1430, 1448
AflIII	ACRYGT	3 cut(s)	54, 459, 1345
AjnI	CCWGG	2 cut(s)	192, 1423
AluBI	AGCT	9 cut(s)	22, 340, 425, 635, 916, 983, 1031, 1330, 1727
AluI	AGCT	9 cut(s)	22, 340, 425, 635, 916, 983, 1031, 1330, 1727
Alw21I	GWGCWC	2 cut(s)	637, 1251
Alw26I	GTCTC	3 cut(s)	4, 896, 1626
Alw44I	GTGCAC	1 cut(s)	1247
AlwI	GGATC	4 cut(s)	366, 428, 441, 1328
AlwNI	CAGNNNCTG	1 cut(s)	102
Ama87I	CYCGRG	3 cut(s)	362, 490, 817
AoxI	GGCC	4 cut(s)	79, 190, 496, 677
ApaLI	GTGCAC	1 cut(s)	1247
ApeKI	GCWGC	4 cut(s)	425, 833, 1657, 1712
ApoI	RAATTY	6 cut(s)	317, 523, 543, 758, 764, 1693
Asp700I	GAANNNNTTC	2 cut(s)	221, 1050
AspLEI	GCGC	3 cut(s)	96, 164, 1441
AspS9I	GGNCC	4 cut(s)	79, 497, 868, 1421
AsuHPI	GGTGA	5 cut(s)	209, 311, 809, 1059, 1226
AsuII	TTCGAA	1 cut(s)	756
AsuNHI	GCTAGC	1 cut(s)	1321
AvaI	CYCGRG	3 cut(s)	362, 490, 817
AvaII	GGWCC	2 cut(s)	868, 1421
AxyI	CCTNAGG	2 cut(s)	153, 1803
BaeGI	GKGCMC	1 cut(s)	1251
BaeI	ACNNNNGTAYC	2 cut(s)	915, 948
BamHI	GGATCC	1 cut(s)	433
BanII	GRGCYC	2 cut(s)	637, 1834
BbsI	GAAGAC	2 cut(s)	355, 1536
Bbv12I	GWGCWC	2 cut(s)	637, 1251
BbvI	GCAGC	4 cut(s)	412, 820, 1669, 1699
BccI	CCATC	7 cut(s)	418, 436, 900, 944, 1220, 1405, 1815
BcgI	CGANNNNNNTGC	2 cut(s)	1726, 1760
BciT130I	CCWGG	2 cut(s)	194, 1425
BclI	TGATCA	1 cut(s)	400
BcoDI	GTCTC	3 cut(s)	4, 896, 1626
BfaI	CTAG	2 cut(s)	990, 1322
BfmI	CTRYAG	2 cut(s)	834, 1812
BfoI	RGCGCY	1 cut(s)	165
BfuAI	ACCTGC	1 cut(s)	1292
BisI	GCNGC	6 cut(s)	66, 82, 426, 834, 1658, 1713
BlpI	GCTNAGC	1 cut(s)	1032
BlsI	GCNGC	6 cut(s)	67, 83, 427, 835, 1659, 1714
Bme1390I	CCNGG	2 cut(s)	194, 1425
Bme18I	GGWCC	2 cut(s)	868, 1421
BmeT110I	CYCGRG	3 cut(s)	362, 490, 817
BmgT120I	GGNCC	4 cut(s)	79, 497, 868, 1421
BmiI	GGNNCC	5 cut(s)	435, 870, 1185, 1367, 1378
BmrFI	CCNGG	2 cut(s)	194, 1425
BmrI	ACTGGG	1 cut(s)	1494
BmsI	GCATC	5 cut(s)	455, 757, 832, 1508, 1656
BmtI	GCTAGC	1 cut(s)	1325
BmuI	ACTGGG	1 cut(s)	1494
BpiI	GAAGAC	2 cut(s)	355, 1536
BpmI	CTGGAG	3 cut(s)	287, 1145, 1482
Bpu10I	CCTNAGC	1 cut(s)	1826
Bpu1102I	GCTNAGC	1 cut(s)	1032
Bpu14I	TTCGAA	1 cut(s)	756
BpuEI	CTTGAG	4 cut(s)	827, 912, 1297, 1612
BsaHI	GRCGYC	3 cut(s)	63, 138, 801
BsaI	GGTCTC	2 cut(s)	4, 1626
BsaJI	CCNNGG	2 cut(s)	193, 437
BsaWI	WCCGGW	1 cut(s)	47
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	4 cut(s)	158, 379, 1430, 1448
Bse1I	ACTGG	6 cut(s)	141, 598, 1358, 1435, 1489, 1499
Bse21I	CCTNAGG	2 cut(s)	153, 1803
Bse3DI	GCAATG	1 cut(s)	266
BseBI	CCWGG	2 cut(s)	194, 1425
BseDI	CCNNGG	2 cut(s)	193, 437
BseGI	GGATG	5 cut(s)	447, 892, 976, 1439, 1523
BseLI	CCNNNNNNNGG	4 cut(s)	158, 379, 1430, 1448
BseMI	GCAATG	1 cut(s)	266
BseMII	CTCAG	4 cut(s)	167, 1023, 1764, 1817
BseNI	ACTGG	6 cut(s)	141, 598, 1358, 1435, 1489, 1499
BseRI	GAGGAG	2 cut(s)	1207, 1210
BseSI	GKGCMC	1 cut(s)	1251
BseXI	GCAGC	4 cut(s)	412, 820, 1669, 1699
BsgI	GTGCAG	1 cut(s)	1676
Bsh1236I	CGCG	2 cut(s)	56, 84
BshFI	GGCC	4 cut(s)	81, 192, 498, 679
BsiHKAI	GWGCWC	2 cut(s)	637, 1251
BsiHKCI	CYCGRG	3 cut(s)	362, 490, 817
BsiSI	CCGG	1 cut(s)	48
BslFI	GGGAC	2 cut(s)	285, 1371
BslI	CCNNNNNNNGG	4 cut(s)	158, 379, 1430, 1448
BsmAI	GTCTC	3 cut(s)	4, 896, 1626
BsmBI	CGTCTC	1 cut(s)	896
BsmFI	GGGAC	2 cut(s)	285, 1371
BsmI	GAATGC	1 cut(s)	878
BsnI	GGCC	4 cut(s)	81, 192, 498, 679
Bso31I	GGTCTC	2 cut(s)	4, 1626
BsoBI	CYCGRG	3 cut(s)	362, 490, 817
Bsp119I	TTCGAA	1 cut(s)	756
Bsp1286I	GDGCHC	3 cut(s)	637, 1251, 1834
Bsp143I	GATC	4 cut(s)	358, 400, 433, 1333
Bsp1720I	GCTNAGC	1 cut(s)	1032
BspACI	CCGC	3 cut(s)	66, 82, 1669
BspANI	GGCC	4 cut(s)	81, 192, 498, 679
BspCNI	CTCAG	4 cut(s)	166, 1024, 1763, 1816
BspFNI	CGCG	2 cut(s)	56, 84
BspHI	TCATGA	2 cut(s)	559, 1011
BspLI	GGNNCC	5 cut(s)	435, 870, 1185, 1367, 1378
BspMAI	CTGCAG	2 cut(s)	838, 1816
BspMI	ACCTGC	1 cut(s)	1292
BspOI	GCTAGC	1 cut(s)	1325
BspPI	GGATC	4 cut(s)	366, 428, 441, 1328
BspT104I	TTCGAA	1 cut(s)	756
BspTNI	GGTCTC	2 cut(s)	4, 1626
BsrDI	GCAATG	1 cut(s)	266
BsrI	ACTGG	6 cut(s)	141, 598, 1358, 1435, 1489, 1499
BssECI	CCNNGG	2 cut(s)	193, 437
BssMI	GATC	4 cut(s)	358, 400, 433, 1333
BssNI	GRCGYC	3 cut(s)	63, 138, 801
BssT1I	CCWWGG	1 cut(s)	437
Bst2UI	CCWGG	2 cut(s)	194, 1425
Bst4CI	ACNGT	4 cut(s)	889, 1120, 1179, 1258
Bst6I	CTCTTC	1 cut(s)	1072
BstACI	GRCGYC	3 cut(s)	63, 138, 801
BstAPI	GCANNNNNTGC	2 cut(s)	842, 1666
BstBI	TTCGAA	1 cut(s)	756
BstC8I	GCNNGC	4 cut(s)	149, 637, 1323, 1846
BstDEI	CTNAG	7 cut(s)	153, 251, 1032, 1700, 1750, 1803, 1826
BstEII	GGTNACC	1 cut(s)	308
BstF5I	GGATG	5 cut(s)	447, 892, 976, 1439, 1523
BstFNI	CGCG	2 cut(s)	56, 84
BstH2I	RGCGCY	1 cut(s)	165
BstHHI	GCGC	3 cut(s)	96, 164, 1441
BstKTI	GATC	4 cut(s)	361, 403, 436, 1336
BstMAI	GTCTC	3 cut(s)	4, 896, 1626
BstMBI	GATC	4 cut(s)	358, 400, 433, 1333
BstMWI	GCNNNNNNNGC	4 cut(s)	62, 842, 1327, 1666
BstNI	CCWGG	2 cut(s)	194, 1425
BstNSI	RCATGY	1 cut(s)	463
BstPI	GGTNACC	1 cut(s)	308
BstSCI	CCNGG	2 cut(s)	192, 1423
BstSFI	CTRYAG	2 cut(s)	834, 1812
BstSLI	GKGCMC	1 cut(s)	1251
BstUI	CGCG	2 cut(s)	56, 84
BstV1I	GCAGC	4 cut(s)	412, 820, 1669, 1699
BstV2I	GAAGAC	2 cut(s)	355, 1536
BstX2I	RGATCY	2 cut(s)	358, 433
BstXI	CCANNNNNNTGG	1 cut(s)	1167
BstYI	RGATCY	2 cut(s)	358, 433
Bsu36I	CCTNAGG	2 cut(s)	153, 1803
BsuRI	GGCC	4 cut(s)	81, 192, 498, 679
BtsCI	GGATG	5 cut(s)	447, 892, 976, 1439, 1523
BtsIMutI	CAGTG	3 cut(s)	885, 1263, 1365
BveI	ACCTGC	1 cut(s)	1292
Cac8I	GCNNGC	4 cut(s)	149, 637, 1323, 1846
CaiI	CAGNNNCTG	1 cut(s)	102
CciI	TCATGA	2 cut(s)	559, 1011
CfoI	GCGC	3 cut(s)	96, 164, 1441
Cfr13I	GGNCC	4 cut(s)	79, 497, 868, 1421
CseI	GACGC	2 cut(s)	71, 146
Csp6I	GTAC	2 cut(s)	1175, 1586
CspCI	CAANNNNNGTGG	2 cut(s)	1774, 1809
CviAII	CATG	9 cut(s)	214, 460, 560, 1012, 1037, 1352, 1504, 1856, 1866
CviQI	GTAC	2 cut(s)	1175, 1586
DdeI	CTNAG	7 cut(s)	153, 251, 1032, 1700, 1750, 1803, 1826
DpnI	GATC	4 cut(s)	360, 402, 435, 1335
DpnII	GATC	4 cut(s)	358, 400, 433, 1333
DraIII	CACNNNGTG	1 cut(s)	1687
Eam1104I	CTCTTC	1 cut(s)	1072
EarI	CTCTTC	1 cut(s)	1072
Ecl136II	GAGCTC	1 cut(s)	635
Eco130I	CCWWGG	1 cut(s)	437
Eco147I	AGGCCT	1 cut(s)	679
Eco24I	GRGCYC	2 cut(s)	637, 1834
Eco31I	GGTCTC	2 cut(s)	4, 1626
Eco47I	GGWCC	2 cut(s)	868, 1421
Eco53kI	GAGCTC	1 cut(s)	635
Eco57I	CTGAAG	4 cut(s)	894, 963, 1037, 1092
Eco81I	CCTNAGG	2 cut(s)	153, 1803
Eco88I	CYCGRG	3 cut(s)	362, 490, 817
Eco91I	GGTNACC	1 cut(s)	308
EcoICRI	GAGCTC	1 cut(s)	635
EcoO65I	GGTNACC	1 cut(s)	308
EcoRII	CCWGG	2 cut(s)	192, 1423
EcoT14I	CCWWGG	1 cut(s)	437
EcoT38I	GRGCYC	2 cut(s)	637, 1834
ErhI	CCWWGG	1 cut(s)	437
Esp3I	CGTCTC	1 cut(s)	896
FaeI	CATG	9 cut(s)	217, 463, 563, 1015, 1040, 1355, 1507, 1859, 1869
FalI	AAGNNNNNCTT	2 cut(s)	1365, 1397
FaqI	GGGAC	2 cut(s)	285, 1371
FatI	CATG	9 cut(s)	213, 459, 559, 1011, 1036, 1351, 1503, 1855, 1865
FauI	CCCGC	1 cut(s)	1662
FauNDI	CATATG	1 cut(s)	517
FbaI	TGATCA	1 cut(s)	400
FblI	GTMKAC	1 cut(s)	1490
Fnu4HI	GCNGC	6 cut(s)	66, 82, 426, 834, 1658, 1713
FokI	GGATG	5 cut(s)	454, 879, 983, 1446, 1530
FriOI	GRGCYC	2 cut(s)	637, 1834
Fsp4HI	GCNGC	6 cut(s)	66, 82, 426, 834, 1658, 1713
FspBI	CTAG	2 cut(s)	990, 1322
GlaI	GCGC	3 cut(s)	95, 163, 1440
GluI	GCNGC	6 cut(s)	66, 82, 426, 834, 1658, 1713
GsuI	CTGGAG	3 cut(s)	287, 1145, 1482
HaeII	RGCGCY	1 cut(s)	165
HaeIII	GGCC	4 cut(s)	81, 192, 498, 679
HapII	CCGG	1 cut(s)	48
HgaI	GACGC	2 cut(s)	71, 146
HhaI	GCGC	3 cut(s)	96, 164, 1441
Hin1I	GRCGYC	3 cut(s)	63, 138, 801
Hin1II	CATG	9 cut(s)	217, 463, 563, 1015, 1040, 1355, 1507, 1859, 1869
Hin6I	GCGC	3 cut(s)	94, 162, 1439
HinP1I	GCGC	3 cut(s)	94, 162, 1439
HincII	GTYRAC	1 cut(s)	963
HindII	GTYRAC	1 cut(s)	963
HindIII	AAGCTT	2 cut(s)	338, 1328
HpaII	CCGG	1 cut(s)	48
HphI	GGTGA	5 cut(s)	209, 311, 809, 1059, 1226
Hpy166II	GTNNAC	6 cut(s)	112, 963, 1234, 1249, 1491, 1796
Hpy188I	TCNGA	6 cut(s)	549, 601, 1104, 1594, 1753, 1820
Hpy8I	GTNNAC	6 cut(s)	112, 963, 1234, 1249, 1491, 1796
Hpy99I	CGWCG	1 cut(s)	140
HpyCH4III	ACNGT	4 cut(s)	889, 1120, 1179, 1258
HpyCH4IV	ACGT	3 cut(s)	801, 994, 1345
HpyF10VI	GCNNNNNNNGC	4 cut(s)	62, 842, 1327, 1666
HpyF3I	CTNAG	7 cut(s)	153, 251, 1032, 1700, 1750, 1803, 1826
HpySE526I	ACGT	3 cut(s)	801, 994, 1345
Hsp92I	GRCGYC	3 cut(s)	63, 138, 801
Hsp92II	CATG	9 cut(s)	217, 463, 563, 1015, 1040, 1355, 1507, 1859, 1869
HspAI	GCGC	3 cut(s)	94, 162, 1439
Ksp22I	TGATCA	1 cut(s)	400
Kzo9I	GATC	4 cut(s)	358, 400, 433, 1333
LmnI	GCTCC	2 cut(s)	1382, 1501
Lsp1109I	GCAGC	4 cut(s)	412, 820, 1669, 1699
LweI	GCATC	5 cut(s)	455, 757, 832, 1508, 1656
MaeI	CTAG	2 cut(s)	990, 1322
MaeII	ACGT	3 cut(s)	801, 994, 1345
MaeIII	GTNAC	4 cut(s)	197, 308, 797, 1065
MalI	GATC	4 cut(s)	360, 402, 435, 1335
MboI	GATC	4 cut(s)	358, 400, 433, 1333
MboII	GAAGA	8 cut(s)	17, 28, 346, 360, 845, 1089, 1541, 1725
MflI	RGATCY	2 cut(s)	358, 433
MhlI	GDGCHC	3 cut(s)	637, 1251, 1834
MluI	ACGCGT	1 cut(s)	54
MlyI	GAGTC	1 cut(s)	829
MmeI	TCCRAC	1 cut(s)	1399
MroXI	GAANNNNTTC	2 cut(s)	221, 1050
MseI	TTAA	5 cut(s)	276, 321, 693, 944, 1253
MslI	CAYNNNNRTG	3 cut(s)	451, 1016, 1165
MspA1I	CMGCKG	1 cut(s)	1031
MspI	CCGG	1 cut(s)	48
MspR9I	CCNGG	2 cut(s)	194, 1425
Mva1269I	GAATGC	1 cut(s)	878
MvaI	CCWGG	2 cut(s)	194, 1425
MvnI	CGCG	2 cut(s)	56, 84
MwoI	GCNNNNNNNGC	4 cut(s)	62, 842, 1327, 1666
NdeI	CATATG	1 cut(s)	517
NdeII	GATC	4 cut(s)	358, 400, 433, 1333
NheI	GCTAGC	1 cut(s)	1321
NlaIII	CATG	9 cut(s)	217, 463, 563, 1015, 1040, 1355, 1507, 1859, 1869
NlaIV	GGNNCC	5 cut(s)	435, 870, 1185, 1367, 1378
NmeAIII	GCCGAG	1 cut(s)	94
NmuCI	GTSAC	3 cut(s)	197, 797, 1065
NspI	RCATGY	1 cut(s)	463
NspV	TTCGAA	1 cut(s)	756
PagI	TCATGA	2 cut(s)	559, 1011
PceI	AGGCCT	1 cut(s)	679
PciI	ACATGT	1 cut(s)	459
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PctI	GAATGC	1 cut(s)	878
PdmI	GAANNNNTTC	2 cut(s)	221, 1050
PflFI	GACNNNGTC	1 cut(s)	1486
PkrI	GCNGC	6 cut(s)	67, 83, 427, 835, 1659, 1714
PleI	GAGTC	1 cut(s)	828
PpsI	GAGTC	1 cut(s)	828
PscI	ACATGT	1 cut(s)	459
Psp124BI	GAGCTC	1 cut(s)	637
Psp6I	CCWGG	2 cut(s)	192, 1423
PspEI	GGTNACC	1 cut(s)	308
PspGI	CCWGG	2 cut(s)	192, 1423
PspN4I	GGNNCC	5 cut(s)	435, 870, 1185, 1367, 1378
PspPI	GGNCC	4 cut(s)	79, 497, 868, 1421
PsrI	GAACNNNNNNTAC	2 cut(s)	1167, 1199
PstI	CTGCAG	2 cut(s)	838, 1816
PstNI	CAGNNNCTG	1 cut(s)	102
PsuI	RGATCY	2 cut(s)	358, 433
PsyI	GACNNNGTC	1 cut(s)	1486
PvuII	CAGCTG	1 cut(s)	1031
RsaI	GTAC	2 cut(s)	1176, 1587
RsaNI	GTAC	2 cut(s)	1175, 1586
RseI	CAYNNNNRTG	3 cut(s)	451, 1016, 1165
SacI	GAGCTC	1 cut(s)	637
SaqAI	TTAA	5 cut(s)	276, 321, 693, 944, 1253
SatI	GCNGC	6 cut(s)	66, 82, 426, 834, 1658, 1713
Sau3AI	GATC	4 cut(s)	358, 400, 433, 1333
Sau96I	GGNCC	4 cut(s)	79, 497, 868, 1421
SchI	GAGTC	1 cut(s)	829
ScrFI	CCNGG	2 cut(s)	194, 1425
SduI	GDGCHC	3 cut(s)	637, 1251, 1834
SfaNI	GCATC	5 cut(s)	455, 757, 832, 1508, 1656
SfcI	CTRYAG	2 cut(s)	834, 1812
SfuI	TTCGAA	1 cut(s)	756
SinI	GGWCC	2 cut(s)	868, 1421
SmiMI	CAYNNNNRTG	3 cut(s)	451, 1016, 1165
SmlI	CTYRAG	4 cut(s)	806, 927, 1312, 1627
SmoI	CTYRAG	4 cut(s)	806, 927, 1312, 1627
SseBI	AGGCCT	1 cut(s)	679
SsiI	CCGC	3 cut(s)	66, 82, 1669
SspMI	CTAG	2 cut(s)	990, 1322
SstI	GAGCTC	1 cut(s)	637
StuI	AGGCCT	1 cut(s)	679
StyD4I	CCNGG	2 cut(s)	192, 1423
StyI	CCWWGG	1 cut(s)	437
TaaI	ACNGT	4 cut(s)	889, 1120, 1179, 1258
TaiI	ACGT	3 cut(s)	804, 997, 1348
TaqI	TCGA	4 cut(s)	126, 756, 1297, 1736
TaqII	GACCGA	1 cut(s)	28
TauI	GCSGC	2 cut(s)	68, 84
Tru1I	TTAA	5 cut(s)	276, 321, 693, 944, 1253
Tru9I	TTAA	5 cut(s)	276, 321, 693, 944, 1253
TscAI	CASTG	3 cut(s)	892, 1263, 1365
TseFI	GTSAC	3 cut(s)	197, 797, 1065
TseI	GCWGC	4 cut(s)	425, 833, 1657, 1712
Tsp45I	GTSAC	3 cut(s)	197, 797, 1065
TspDTI	ATGAA	9 cut(s)	230, 435, 762, 804, 871, 1053, 1340, 1444, 1542
TspGWI	ACGGA	2 cut(s)	97, 920
TspRI	CASTG	3 cut(s)	892, 1263, 1365
Tth111I	GACNNNGTC	1 cut(s)	1486
VneI	GTGCAC	1 cut(s)	1247
VpaK11BI	GGWCC	2 cut(s)	868, 1421
XapI	RAATTY	6 cut(s)	317, 523, 543, 758, 764, 1693
XceI	RCATGY	1 cut(s)	463
XmiI	GTMKAC	1 cut(s)	1490
XmnI	GAANNNNTTC	2 cut(s)	221, 1050
XspI	CTAG	2 cut(s)	990, 1322
ZraI	GACGTC	1 cut(s)	802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.