Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0004664

Physical Location & Seq

Genomic Coordinates Reverse (-)

74177426 .. 74181489

Gene Structure 4064 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G046800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGAAGAGAGACCGAAGAAGCTACTCATTCTCTACGCCACTCAAACCGGAAACGCCTTAGACGCCGCCGAGAGAATGGGCCGCGAAGCCGAGCGCAGAGGCTGTTCCGTCCACCTTCTCTCCCTCGACCAATACGACGCCAGTTGCTTGCCTCAGGAGGGCGCTGTAATTTTCGTTGTTTCTACCACAGGCCAGGGTGACACTCCCGATTCCATGAAGGGATTTTGGAAATATCTATTGCAGAGAAATCTAAGTAGGCAATGGCTGGAGGGACTTAACTATGCTGTTTTTGGATTGGGTGATTCTGGTTACCAAAAATTTAATTTTGTTGCGAAGAAGCTTGACAGAAGACTTTTGGATCTCGGGGCAACCCCTATTGTGGAAAGAGGTTTAGGAGATGATCAGCACCCATCAGGATATGAAGCTGCTCTGGATCCTTGGATGGCATCTTTGTGGAACATGTTGAATACAATCAATTCCAAATACTTCCCGAGTGGCCCGGACTTTTTTATTCCATATGAGAATTTGATTGCTCAACCGAAAATTCGGATTATGTATCATGACATTGACAAAGTGGATTCACAACTTTCAACTGGTTCAGACTTGAATCACATTGAGTTGCAGATTGAAAGAGCTCGCAAAATGTCCGCTGTAAAGTATTCTCTTGACAAGAATAGGCCTGACTGCATTCTTAAATTGGTCAAGAATCAACCATTGACTAAATCAAGTAGTAAAGATAAAGAGGTGCATCACTTCGAATTTGAATTTGTTTCATCTGCTATTGAATATGAAGTCGGTGACGTCCTTGAGATTCTCCCTAGTCAAAATCCTGCTGCAGTAGATGCTTTCCTACTTCGTTGTAATTTGGACCCTGAAGCATTCATCACTGTCCATCCTTTAGAGACGGAGAATCAGCTTCTTGATACTCAAGTTCCCATCAAATTAAAAACTTTTGTTGAGTTGACAATGGATGTTGCTTCAGCTTCCCCTAGACGTTATTTCTTTGAGGCAAGAATCCAGTATGTAATATTGGTCATGAGTATGTTTGCAACAGCTGAGCATGAAAAGGAAAGACTTCAGTATTTTGTGTCACCTGAAGGAAGAGATGACCTATATCAATACAATCAGAGGGAACGGAGGACTGTTCTGGAGGTATTAGAGGATTTCCCCTCCGTTCAAATGCCATTTGAATGGCTGGTACAGTTGGTTCCTCCTTTGAAAACGAGGGCTTTCTCCATCTCCTCCTCCCCTTCGGTTCACCCTAATCAAGTGCACTTAACAGTGAGTGTAGTATCATGGACAACACCTTTCAAAAGAAATCGAGCAGGTCTTTGCTCAAGTTGGCTAGCCAAGCTTGATCCTGAACAACGTGTTCATGTTCCAGTGTGGTTCCAGAAAGGCTCCCTTCGTCCCCCACCACCATCACTTCCTCTTATTCTCGTTGGACCTGGAACTGGATGTGCGCCCTTTCGTGGATTCATTGAGGAAAGAGCCATACAAAGTTTGACTGGTTCTACTGCTCCAGTCATGTTCTTTTTTGGATGCAGAAATGAAGACAACGATTTCTTATACAAAGAGTTTTGGTTATCTCATTCGCAAAACAATGGGGTACTTTCAGAAGCGAAGGGTGGAGGCTTTTATGTTGCCTTCTCAAGAGACCAGCCACAGAAAGTCTATGTGCAGCATAAGATGCGGGAACATAGCCACAGGGTGTGGAATTTGCTTAGTGAGGGGGCTGCAATCTATGTAGCTGGTTCTTCGACAAAAATGCCCTCAGATGTATTATTAGCGTTTGAGGAAATTATCTCCAAAGAAAGTGGGCTTCCTCAGGAATCTGCAGTCAGATGGCTTAGGGCTCTGGAAAAGGCTGGCAAATACCATGTTGAAGCGTGGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010154 GO:0016491 GO:0016651 GO:0022414 GO:0032501 GO:0032502 GO:0035690 GO:0036245 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0055114 GO:0061458 GO:0070887 GO:0071310 GO:1901654 GO:1901655 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

632

Amino Acids

71.77

Weight (kDa)

6.1

Isoelectric Point (pI)

47.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	10 - 147	4.3e-37	Flavodoxin
FAD_binding_1	PF00667	229 - 448	5.7e-45	FAD binding domain
NAD_binding_1	PF00175	480 - 590	9.3e-11	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004664)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02280 AT3G02280 AT3G02280
fragaria_vesca	FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220 FvH4_6g45220
malus_domestica	MD09G1086400.v1.1 MD09G1086700.v1.1 MD09G1087200.v1.1 MD12G1122800.v1.1
prunus_persica	Prupe.3G238300_v2.0.a1 Prupe.3G238300_v2.0.a1
pyrus_communis	pycom09g01200 pycom09g01250 pycom09g01260 pycom12g12160
rosa_chinensis	RchiOBHm_Chr2g0162931
rosa_laevigata	RLG00000021362
rosa_multiflora	Rmu_sc0006129.1_g000002 Rmu_sc0036821.1_g000001
rosa_roxburghii	Rroxscaffold_2G00087700
rosa_rugosa	Rorug02G0499400
rosa_samantha	Rh2AG565400 Rh2BG578100 Rh2CG547800 Rh2DG588300
rosa_wichuraiana	Rw2G046800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	804
Acc36I	ACCTGC	1 cut(s)	1316
AccII	CGCG	1 cut(s)	84
AciI	CCGC	4 cut(s)	66, 82, 648, 1693
AclWI	GGATC	4 cut(s)	366, 428, 441, 1352
AcsI	RAATTY	6 cut(s)	317, 523, 543, 758, 764, 1717
AcuI	CTGAAG	4 cut(s)	894, 963, 1061, 1116
AcyI	GRCGYC	3 cut(s)	63, 138, 801
AdeI	CACNNNGTG	1 cut(s)	1711
AfaI	GTAC	2 cut(s)	1200, 1611
AfiI	CCNNNNNNNGG	4 cut(s)	158, 379, 1454, 1472
AflIII	ACRYGT	2 cut(s)	459, 1369
AjnI	CCWGG	2 cut(s)	192, 1447
AluBI	AGCT	9 cut(s)	22, 340, 425, 635, 916, 983, 1055, 1354, 1751
AluI	AGCT	9 cut(s)	22, 340, 425, 635, 916, 983, 1055, 1354, 1751
Alw21I	GWGCWC	2 cut(s)	637, 1275
Alw26I	GTCTC	3 cut(s)	4, 896, 1650
Alw44I	GTGCAC	1 cut(s)	1271
AlwI	GGATC	4 cut(s)	366, 428, 441, 1352
AlwNI	CAGNNNCTG	1 cut(s)	102
Ama87I	CYCGRG	2 cut(s)	362, 490
AoxI	GGCC	4 cut(s)	79, 190, 496, 677
ApaLI	GTGCAC	1 cut(s)	1271
ApeKI	GCWGC	4 cut(s)	425, 833, 1681, 1736
ApoI	RAATTY	6 cut(s)	317, 523, 543, 758, 764, 1717
Asp700I	GAANNNNTTC	1 cut(s)	1074
AspLEI	GCGC	3 cut(s)	96, 164, 1465
AspS9I	GGNCC	4 cut(s)	79, 497, 868, 1445
AsuC2I	CCSGG	1 cut(s)	500
AsuHPI	GGTGA	5 cut(s)	209, 311, 809, 1083, 1250
AsuII	TTCGAA	1 cut(s)	756
AsuNHI	GCTAGC	1 cut(s)	1345
AvaI	CYCGRG	2 cut(s)	362, 490
AvaII	GGWCC	2 cut(s)	868, 1445
AxyI	CCTNAGG	2 cut(s)	153, 1827
BaeGI	GKGCMC	1 cut(s)	1275
BaeI	ACNNNNGTAYC	2 cut(s)	915, 948
BamHI	GGATCC	1 cut(s)	433
BanII	GRGCYC	2 cut(s)	637, 1858
BbsI	GAAGAC	2 cut(s)	355, 1560
Bbv12I	GWGCWC	2 cut(s)	637, 1275
BbvI	GCAGC	4 cut(s)	412, 820, 1693, 1723
BccI	CCATC	7 cut(s)	418, 436, 900, 944, 1244, 1429, 1839
BcgI	CGANNNNNNTGC	2 cut(s)	1750, 1784
BciT130I	CCWGG	2 cut(s)	194, 1449
BclI	TGATCA	1 cut(s)	400
BcnI	CCSGG	1 cut(s)	500
BcoDI	GTCTC	3 cut(s)	4, 896, 1650
BfaI	CTAG	3 cut(s)	819, 990, 1346
BfmI	CTRYAG	2 cut(s)	834, 1836
BfoI	RGCGCY	1 cut(s)	165
BfuAI	ACCTGC	1 cut(s)	1316
BisI	GCNGC	6 cut(s)	66, 82, 426, 834, 1682, 1737
BlpI	GCTNAGC	1 cut(s)	1056
BlsI	GCNGC	6 cut(s)	67, 83, 427, 835, 1683, 1738
Bme1390I	CCNGG	3 cut(s)	194, 500, 1449
Bme18I	GGWCC	2 cut(s)	868, 1445
BmeT110I	CYCGRG	2 cut(s)	362, 490
BmgT120I	GGNCC	4 cut(s)	79, 497, 868, 1445
BmiI	GGNNCC	5 cut(s)	435, 870, 1209, 1391, 1402
BmrFI	CCNGG	3 cut(s)	194, 500, 1449
BmsI	GCATC	5 cut(s)	455, 757, 832, 1532, 1680
BmtI	GCTAGC	1 cut(s)	1349
BpiI	GAAGAC	2 cut(s)	355, 1560
BpmI	CTGGAG	3 cut(s)	287, 1169, 1506
Bpu10I	CCTNAGC	1 cut(s)	1850
Bpu1102I	GCTNAGC	1 cut(s)	1056
Bpu14I	TTCGAA	1 cut(s)	756
BpuEI	CTTGAG	4 cut(s)	827, 912, 1321, 1636
BpuMI	CCSGG	1 cut(s)	500
BsaHI	GRCGYC	3 cut(s)	63, 138, 801
BsaI	GGTCTC	2 cut(s)	4, 1650
BsaJI	CCNNGG	2 cut(s)	193, 437
BsaWI	WCCGGW	1 cut(s)	47
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	4 cut(s)	158, 379, 1454, 1472
Bse1I	ACTGG	7 cut(s)	141, 598, 1018, 1382, 1459, 1513, 1523
Bse21I	CCTNAGG	2 cut(s)	153, 1827
Bse3DI	GCAATG	1 cut(s)	266
BseBI	CCWGG	2 cut(s)	194, 1449
BseDI	CCNNGG	2 cut(s)	193, 437
BseGI	GGATG	5 cut(s)	447, 892, 976, 1463, 1547
BseLI	CCNNNNNNNGG	4 cut(s)	158, 379, 1454, 1472
BseMI	GCAATG	1 cut(s)	266
BseMII	CTCAG	4 cut(s)	167, 1047, 1788, 1841
BseNI	ACTGG	7 cut(s)	141, 598, 1018, 1382, 1459, 1513, 1523
BseRI	GAGGAG	2 cut(s)	1231, 1234
BseSI	GKGCMC	1 cut(s)	1275
BseXI	GCAGC	4 cut(s)	412, 820, 1693, 1723
BsgI	GTGCAG	1 cut(s)	1700
Bsh1236I	CGCG	1 cut(s)	84
BshFI	GGCC	4 cut(s)	81, 192, 498, 679
BsiHKAI	GWGCWC	2 cut(s)	637, 1275
BsiHKCI	CYCGRG	2 cut(s)	362, 490
BsiSI	CCGG	2 cut(s)	48, 500
BslFI	GGGAC	2 cut(s)	285, 1395
BslI	CCNNNNNNNGG	4 cut(s)	158, 379, 1454, 1472
BsmAI	GTCTC	3 cut(s)	4, 896, 1650
BsmBI	CGTCTC	1 cut(s)	896
BsmFI	GGGAC	2 cut(s)	285, 1395
BsmI	GAATGC	2 cut(s)	687, 878
BsnI	GGCC	4 cut(s)	81, 192, 498, 679
Bso31I	GGTCTC	2 cut(s)	4, 1650
BsoBI	CYCGRG	2 cut(s)	362, 490
Bsp119I	TTCGAA	1 cut(s)	756
Bsp1286I	GDGCHC	3 cut(s)	637, 1275, 1858
Bsp143I	GATC	4 cut(s)	358, 400, 433, 1357
Bsp1720I	GCTNAGC	1 cut(s)	1056
BspACI	CCGC	4 cut(s)	66, 82, 648, 1693
BspANI	GGCC	4 cut(s)	81, 192, 498, 679
BspCNI	CTCAG	4 cut(s)	166, 1048, 1787, 1840
BspFNI	CGCG	1 cut(s)	84
BspHI	TCATGA	2 cut(s)	559, 1035
BspLI	GGNNCC	5 cut(s)	435, 870, 1209, 1391, 1402
BspMAI	CTGCAG	2 cut(s)	838, 1840
BspMI	ACCTGC	1 cut(s)	1316
BspOI	GCTAGC	1 cut(s)	1349
BspPI	GGATC	4 cut(s)	366, 428, 441, 1352
BspT104I	TTCGAA	1 cut(s)	756
BspTNI	GGTCTC	2 cut(s)	4, 1650
BsrDI	GCAATG	1 cut(s)	266
BsrI	ACTGG	7 cut(s)	141, 598, 1018, 1382, 1459, 1513, 1523
BssECI	CCNNGG	2 cut(s)	193, 437
BssMI	GATC	4 cut(s)	358, 400, 433, 1357
BssNI	GRCGYC	3 cut(s)	63, 138, 801
BssT1I	CCWWGG	1 cut(s)	437
Bst2UI	CCWGG	2 cut(s)	194, 1449
Bst4CI	ACNGT	4 cut(s)	889, 1144, 1203, 1282
Bst6I	CTCTTC	1 cut(s)	1096
BstACI	GRCGYC	3 cut(s)	63, 138, 801
BstAPI	GCANNNNNTGC	2 cut(s)	842, 1690
BstBI	TTCGAA	1 cut(s)	756
BstC8I	GCNNGC	4 cut(s)	149, 637, 1347, 1870
BstDEI	CTNAG	8 cut(s)	58, 153, 251, 1056, 1724, 1774, 1827, 1850
BstEII	GGTNACC	1 cut(s)	308
BstF5I	GGATG	5 cut(s)	447, 892, 976, 1463, 1547
BstFNI	CGCG	1 cut(s)	84
BstH2I	RGCGCY	1 cut(s)	165
BstHHI	GCGC	3 cut(s)	96, 164, 1465
BstKTI	GATC	4 cut(s)	361, 403, 436, 1360
BstMAI	GTCTC	3 cut(s)	4, 896, 1650
BstMBI	GATC	4 cut(s)	358, 400, 433, 1357
BstMWI	GCNNNNNNNGC	4 cut(s)	62, 842, 1351, 1690
BstNI	CCWGG	2 cut(s)	194, 1449
BstNSI	RCATGY	1 cut(s)	463
BstPI	GGTNACC	1 cut(s)	308
BstSCI	CCNGG	3 cut(s)	192, 498, 1447
BstSFI	CTRYAG	2 cut(s)	834, 1836
BstSLI	GKGCMC	1 cut(s)	1275
BstUI	CGCG	1 cut(s)	84
BstV1I	GCAGC	4 cut(s)	412, 820, 1693, 1723
BstV2I	GAAGAC	2 cut(s)	355, 1560
BstX2I	RGATCY	2 cut(s)	358, 433
BstXI	CCANNNNNNTGG	1 cut(s)	1191
BstYI	RGATCY	2 cut(s)	358, 433
Bsu36I	CCTNAGG	2 cut(s)	153, 1827
BsuRI	GGCC	4 cut(s)	81, 192, 498, 679
BtsCI	GGATG	5 cut(s)	447, 892, 976, 1463, 1547
BtsIMutI	CAGTG	3 cut(s)	885, 1287, 1389
BveI	ACCTGC	1 cut(s)	1316
Cac8I	GCNNGC	4 cut(s)	149, 637, 1347, 1870
CaiI	CAGNNNCTG	1 cut(s)	102
CciI	TCATGA	2 cut(s)	559, 1035
CfoI	GCGC	3 cut(s)	96, 164, 1465
Cfr13I	GGNCC	4 cut(s)	79, 497, 868, 1445
CseI	GACGC	2 cut(s)	71, 146
Csp6I	GTAC	2 cut(s)	1199, 1610
CspCI	CAANNNNNGTGG	2 cut(s)	1798, 1833
CviAII	CATG	9 cut(s)	214, 460, 560, 1036, 1061, 1296, 1376, 1528, 1880
CviQI	GTAC	2 cut(s)	1199, 1610
DdeI	CTNAG	8 cut(s)	58, 153, 251, 1056, 1724, 1774, 1827, 1850
DpnI	GATC	4 cut(s)	360, 402, 435, 1359
DpnII	GATC	4 cut(s)	358, 400, 433, 1357
DraIII	CACNNNGTG	1 cut(s)	1711
Eam1104I	CTCTTC	1 cut(s)	1096
EarI	CTCTTC	1 cut(s)	1096
Ecl136II	GAGCTC	1 cut(s)	635
Eco130I	CCWWGG	1 cut(s)	437
Eco147I	AGGCCT	1 cut(s)	679
Eco24I	GRGCYC	2 cut(s)	637, 1858
Eco31I	GGTCTC	2 cut(s)	4, 1650
Eco47I	GGWCC	2 cut(s)	868, 1445
Eco53kI	GAGCTC	1 cut(s)	635
Eco57I	CTGAAG	4 cut(s)	894, 963, 1061, 1116
Eco81I	CCTNAGG	2 cut(s)	153, 1827
Eco88I	CYCGRG	2 cut(s)	362, 490
Eco91I	GGTNACC	1 cut(s)	308
EcoICRI	GAGCTC	1 cut(s)	635
EcoO65I	GGTNACC	1 cut(s)	308
EcoRII	CCWGG	2 cut(s)	192, 1447
EcoT14I	CCWWGG	1 cut(s)	437
EcoT38I	GRGCYC	2 cut(s)	637, 1858
ErhI	CCWWGG	1 cut(s)	437
Esp3I	CGTCTC	1 cut(s)	896
FaeI	CATG	9 cut(s)	217, 463, 563, 1039, 1064, 1299, 1379, 1531, 1883
FalI	AAGNNNNNCTT	2 cut(s)	1389, 1421
FaqI	GGGAC	2 cut(s)	285, 1395
FatI	CATG	9 cut(s)	213, 459, 559, 1035, 1060, 1295, 1375, 1527, 1879
FauI	CCCGC	1 cut(s)	1686
FauNDI	CATATG	1 cut(s)	517
FbaI	TGATCA	1 cut(s)	400
Fnu4HI	GCNGC	6 cut(s)	66, 82, 426, 834, 1682, 1737
FokI	GGATG	5 cut(s)	454, 879, 983, 1470, 1554
FriOI	GRGCYC	2 cut(s)	637, 1858
Fsp4HI	GCNGC	6 cut(s)	66, 82, 426, 834, 1682, 1737
FspBI	CTAG	3 cut(s)	819, 990, 1346
GlaI	GCGC	3 cut(s)	95, 163, 1464
GluI	GCNGC	6 cut(s)	66, 82, 426, 834, 1682, 1737
GsuI	CTGGAG	3 cut(s)	287, 1169, 1506
HaeII	RGCGCY	1 cut(s)	165
HaeIII	GGCC	4 cut(s)	81, 192, 498, 679
HapII	CCGG	2 cut(s)	48, 500
HgaI	GACGC	2 cut(s)	71, 146
HhaI	GCGC	3 cut(s)	96, 164, 1465
Hin1I	GRCGYC	3 cut(s)	63, 138, 801
Hin1II	CATG	9 cut(s)	217, 463, 563, 1039, 1064, 1299, 1379, 1531, 1883
Hin6I	GCGC	3 cut(s)	94, 162, 1463
HinP1I	GCGC	3 cut(s)	94, 162, 1463
HincII	GTYRAC	1 cut(s)	963
HindII	GTYRAC	1 cut(s)	963
HindIII	AAGCTT	2 cut(s)	338, 1352
HpaII	CCGG	2 cut(s)	48, 500
HphI	GGTGA	5 cut(s)	209, 311, 809, 1083, 1250
Hpy166II	GTNNAC	4 cut(s)	112, 963, 1258, 1273
Hpy188I	TCNGA	6 cut(s)	549, 601, 1128, 1618, 1777, 1844
Hpy8I	GTNNAC	4 cut(s)	112, 963, 1258, 1273
Hpy99I	CGWCG	1 cut(s)	140
HpyAV	CCTTC	7 cut(s)	125, 211, 1091, 1260, 1415, 1618, 1657
HpyCH4III	ACNGT	4 cut(s)	889, 1144, 1203, 1282
HpyCH4IV	ACGT	3 cut(s)	801, 994, 1369
HpyF10VI	GCNNNNNNNGC	4 cut(s)	62, 842, 1351, 1690
HpyF3I	CTNAG	8 cut(s)	58, 153, 251, 1056, 1724, 1774, 1827, 1850
HpySE526I	ACGT	3 cut(s)	801, 994, 1369
Hsp92I	GRCGYC	3 cut(s)	63, 138, 801
Hsp92II	CATG	9 cut(s)	217, 463, 563, 1039, 1064, 1299, 1379, 1531, 1883
HspAI	GCGC	3 cut(s)	94, 162, 1463
Ksp22I	TGATCA	1 cut(s)	400
Kzo9I	GATC	4 cut(s)	358, 400, 433, 1357
LmnI	GCTCC	2 cut(s)	1406, 1525
Lsp1109I	GCAGC	4 cut(s)	412, 820, 1693, 1723
LweI	GCATC	5 cut(s)	455, 757, 832, 1532, 1680
MaeI	CTAG	3 cut(s)	819, 990, 1346
MaeII	ACGT	3 cut(s)	801, 994, 1369
MaeIII	GTNAC	4 cut(s)	197, 308, 797, 1089
MalI	GATC	4 cut(s)	360, 402, 435, 1359
MboI	GATC	4 cut(s)	358, 400, 433, 1357
MboII	GAAGA	7 cut(s)	17, 28, 346, 360, 1113, 1565, 1749
MflI	RGATCY	2 cut(s)	358, 433
MhlI	GDGCHC	3 cut(s)	637, 1275, 1858
MmeI	TCCRAC	1 cut(s)	1423
MroXI	GAANNNNTTC	1 cut(s)	1074
MseI	TTAA	5 cut(s)	276, 321, 693, 944, 1277
MslI	CAYNNNNRTG	3 cut(s)	451, 1040, 1189
MspA1I	CMGCKG	2 cut(s)	650, 1055
MspI	CCGG	2 cut(s)	48, 500
MspR9I	CCNGG	3 cut(s)	194, 500, 1449
Mva1269I	GAATGC	2 cut(s)	687, 878
MvaI	CCWGG	2 cut(s)	194, 1449
MvnI	CGCG	1 cut(s)	84
MwoI	GCNNNNNNNGC	4 cut(s)	62, 842, 1351, 1690
NciI	CCSGG	1 cut(s)	500
NdeI	CATATG	1 cut(s)	517
NdeII	GATC	4 cut(s)	358, 400, 433, 1357
NheI	GCTAGC	1 cut(s)	1345
NlaIII	CATG	9 cut(s)	217, 463, 563, 1039, 1064, 1299, 1379, 1531, 1883
NlaIV	GGNNCC	5 cut(s)	435, 870, 1209, 1391, 1402
NmeAIII	GCCGAG	2 cut(s)	94, 115
NmuCI	GTSAC	3 cut(s)	197, 797, 1089
NspI	RCATGY	1 cut(s)	463
NspV	TTCGAA	1 cut(s)	756
PagI	TCATGA	2 cut(s)	559, 1035
PceI	AGGCCT	1 cut(s)	679
PciI	ACATGT	1 cut(s)	459
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PctI	GAATGC	2 cut(s)	687, 878
PdmI	GAANNNNTTC	1 cut(s)	1074
PkrI	GCNGC	6 cut(s)	67, 83, 427, 835, 1683, 1738
PscI	ACATGT	1 cut(s)	459
Psp124BI	GAGCTC	1 cut(s)	637
Psp6I	CCWGG	2 cut(s)	192, 1447
PspEI	GGTNACC	1 cut(s)	308
PspGI	CCWGG	2 cut(s)	192, 1447
PspN4I	GGNNCC	5 cut(s)	435, 870, 1209, 1391, 1402
PspPI	GGNCC	4 cut(s)	79, 497, 868, 1445
PsrI	GAACNNNNNNTAC	2 cut(s)	1191, 1223
PstI	CTGCAG	2 cut(s)	838, 1840
PstNI	CAGNNNCTG	1 cut(s)	102
PsuI	RGATCY	2 cut(s)	358, 433
PvuII	CAGCTG	1 cut(s)	1055
RsaI	GTAC	2 cut(s)	1200, 1611
RsaNI	GTAC	2 cut(s)	1199, 1610
RseI	CAYNNNNRTG	3 cut(s)	451, 1040, 1189
SacI	GAGCTC	1 cut(s)	637
SaqAI	TTAA	5 cut(s)	276, 321, 693, 944, 1277
SatI	GCNGC	6 cut(s)	66, 82, 426, 834, 1682, 1737
Sau3AI	GATC	4 cut(s)	358, 400, 433, 1357
Sau96I	GGNCC	4 cut(s)	79, 497, 868, 1445
ScrFI	CCNGG	3 cut(s)	194, 500, 1449
SduI	GDGCHC	3 cut(s)	637, 1275, 1858
SfaNI	GCATC	5 cut(s)	455, 757, 832, 1532, 1680
SfcI	CTRYAG	2 cut(s)	834, 1836
SfuI	TTCGAA	1 cut(s)	756
SinI	GGWCC	2 cut(s)	868, 1445
SmiMI	CAYNNNNRTG	3 cut(s)	451, 1040, 1189
SmlI	CTYRAG	4 cut(s)	806, 927, 1336, 1651
SmoI	CTYRAG	4 cut(s)	806, 927, 1336, 1651
SseBI	AGGCCT	1 cut(s)	679
SsiI	CCGC	4 cut(s)	66, 82, 648, 1693
SspI	AATATT	1 cut(s)	1029
SspMI	CTAG	3 cut(s)	819, 990, 1346
SstI	GAGCTC	1 cut(s)	637
StuI	AGGCCT	1 cut(s)	679
StyD4I	CCNGG	3 cut(s)	192, 498, 1447
StyI	CCWWGG	1 cut(s)	437
TaaI	ACNGT	4 cut(s)	889, 1144, 1203, 1282
TaiI	ACGT	3 cut(s)	804, 997, 1372
TaqI	TCGA	4 cut(s)	126, 756, 1321, 1760
TaqII	GACCGA	1 cut(s)	28
TauI	GCSGC	2 cut(s)	68, 84
Tru1I	TTAA	5 cut(s)	276, 321, 693, 944, 1277
Tru9I	TTAA	5 cut(s)	276, 321, 693, 944, 1277
TscAI	CASTG	3 cut(s)	892, 1287, 1389
TseFI	GTSAC	3 cut(s)	197, 797, 1089
TseI	GCWGC	4 cut(s)	425, 833, 1681, 1736
Tsp45I	GTSAC	3 cut(s)	197, 797, 1089
TspDTI	ATGAA	9 cut(s)	230, 435, 762, 804, 871, 1077, 1364, 1468, 1566
TspGWI	ACGGA	4 cut(s)	97, 920, 1150, 1162
TspRI	CASTG	3 cut(s)	892, 1287, 1389
VneI	GTGCAC	1 cut(s)	1271
VpaK11BI	GGWCC	2 cut(s)	868, 1445
XapI	RAATTY	6 cut(s)	317, 523, 543, 758, 764, 1717
XceI	RCATGY	1 cut(s)	463
XmnI	GAANNNNTTC	1 cut(s)	1074
XspI	CTAG	3 cut(s)	819, 990, 1346
ZraI	GACGTC	1 cut(s)	802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.