Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001866

Physical Location & Seq

Genomic Coordinates Forward (+)

7816050 .. 7821927

Gene Structure 5878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1107300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGATTCCGGCTAGAAACATGCCTTCGATGATTGGAAGCAATGGGAACATTAACGGGTTTGCATCATCTTCAGGACTCACACTTGGTCAGCCAAACATGATGGAAGCCGGTCATCTGCACCCGTTAGACATGGCTACAAACACCTCTGAAAGCGACATTGCTCGGTTCCGAGATGATGACTTCGACAGTGCTACCAAATCCGGCAGCGACAACCCTGAAGGCGGTTCCGGTGACGACCAAGAAAACCGTCGACCCAAAAAGAAGCGTTATCACCGCCACACACAGCATCAGATCCAAGAAATGGAAGCTTTTTTCAAGGAATGTCCCCACCCAGATGACAAGCAGAGGAAGGAACTGAGCAGAGAATTAGGTTTGGAACCATTACAAGTCAAATTTTGGTTTCAAAACAAGCGCACCCAAATGAAGACTCAGCATGAGCGGCATGAGAACACACAACTTCGGAACGAAAACGAAAAGCTCCGTGCTGATAACATGAGGTACAGAGAAGCGCTAGGTAATGCCTCATGCCCTAATTGTGGCGGCCCAACAGCTCTAGGAGAGATGTCATTCGACGAACACCATCTGAGACTCGATAATGCTCGATTACGAGAAGAGATCGATCGTATATCTGCGATAGCTGCGAAGTACGTTGGCAAACCGTTGGGAAACTACCCTCTCATGTCTTCTCCTGTTCCTTCCCGTGGTCCACTTGATCTTGGGGTTGGGAGCTTTGGTGGTCAGCCAGGCATGGGCGGTGAGATGTATGGTGCTGGAGACCTTCTCAGGTCAATCAGTGCACCAAGTGAGGCAGACAAGCCAATGATAATTGAGCTTGCTGTTGCAGCTATGGAGGAACTCGTCAGAATGGCCCAAATGGGTGAACCCTTGTGGATGACCAGCCTTGATGGCAGCATGACCGTACTTAATGAAGATGAGTACATCAGAACATTCCCTCGTGGAGTCGGGCCAAAACAAAATGGCTTCAAAACTGAAGCTTCGCGTGAGAGTGCAGTTGTTATCATGAACCACATTAACCTTGTTGAGATTCTCATGGATGTGAATCAGTGGTCGACTGTATTTTCTGGGATTGTGTCAAGAGCTTTGACCCTTGAAGTCTTATCAACTGGCGTGGCTGGAAATTACAATGGAGCCTTGCAAGTGATGACGGCAGAATTCCAGGTTCCTTCACCACTTGTTCCAACTCGTGAGAGTTATTATGTGAGGTACTGCAAACAGCATGCTGATGGCACCTGGGCTGTGGTTGATGTTTCCTTGGACAACTTGCGCCCTAATCCTGCACCCAGATCTTGTCAAAGAAGGCCCTCAGGATGCCTAATTCAAGAAATGCCAAACGGGTATTCAAAGGTTACATGGGTTGAGCATGCTGAAGTGGATGAAAGAGGTGTTCACAACCTCTACAAGCAGCTGGTTAGCTCCGGCCACGCATTTGGCGCTAAACGATGGGTTGCCACCTTGGACAGGCAATGCGAACGTCTGGCTAGTGCGATGGCATCAAACATCCCTACCGGTGATGTTGGAGTGATTACAAATCAAGAAGGGAGAAAAAGCATGCTAAAATTGGCTGAAAGAATGGTGATTAGCTTCTGTGCTGGAGTGAGTGCATCAACCACTCACACATGGACCACACTGTCTGGAACCGGGGCTGATGATGTCCGGGTGATGACCCGAAAGAGTGTGGATGATCCCGGAAGGCCTCCAGGTATTGTGCTCAGTGCCGCCACATCTTTCTGGCTGCCAGTTCCTCCCAAAAGAGTCTTTGAGTTTCTCCGCGATGAGAACTCTCGCAGCGAGTGGGATATTCTTTCCAATGGGGGAATTGTTCAAGAGATGGCACACATTGCTAATGGTCGTGACACTGGAAATTGCGTGTCTCTACTACGAGTAAATAGTGCTAATTCAAGCCAGAGCAACATGCTGATACTGCAAGAAAGCTGCTCTGACCCAACAGCTTCCTTTGTGATTTATGCACCAGTTGACATTGTTTCCATGAATGTGGTGCTGAATGGGAGTGACCCTGACTATGTTGCCCTTCTTCCTTCTGGGTTTGCTATACTCCCGGACGGAGCCGGCATTGGAGACTCTGGCTCTGGTGGTGGTTCCCTTCTCACTGTTGCTTTTCAGATCTTGGTTGATTCAGTCCCCACTGCTAAGCTGTCTCTCGGATCAGTTGCAACAGTTAACAATCTTATCGCTTGCACTGTTGAGAGGATCAAAGCTGCATTGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

750

Amino Acids

81.63

Weight (kDa)

5.73

Isoelectric Point (pI)

41.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	87 - 142	1e-18	Homeodomain
START	PF01852	278 - 498	1.5e-54	START domain
PDF2_C	PF25797	518 - 748	8.1e-99	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230
fragaria_vesca	FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390
malus_domestica	MD09G1107300.v1.1 MD17G1095000.v1.1
prunus_persica	Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1
pyrus_communis	pycom09g02950 pycom17g09140
rosa_chinensis	RchiOBHm_Chr2g0159731
rosa_laevigata	RLG00000021177
rosa_multiflora	Rmu_sc0004966.1_g000003
rosa_roxburghii	Rroxscaffold_2G00090270 Rroxscaffold_2G00090370
rosa_rugosa	Rorug02G0478100 Rorug02G0478200 Rorug02G0478300
rosa_samantha	Rh2AG544900 Rh2BG557700 Rh2CG528000 Rh2DG567200
rosa_wichuraiana	Rw2G045060 Rw3G015270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1648
AccB1I	GGYRCC	1 cut(s)	1247
AccB7I	CCANNNNNTGG	1 cut(s)	301
AccBSI	CCGCTC	1 cut(s)	439
AccI	GTMKAC	2 cut(s)	250, 1070
AccII	CGCG	2 cut(s)	1000, 1791
AciI	CCGC	7 cut(s)	222, 274, 439, 540, 753, 1737, 1789
AclWI	GGATC	4 cut(s)	286, 1697, 2191, 2237
AcoI	YGGCCR	1 cut(s)	1438
AcsI	RAATTY	2 cut(s)	392, 1172
AcuI	CTGAAG	4 cut(s)	54, 237, 1011, 1407
AdeI	CACNNNGTG	1 cut(s)	803
AfaI	GTAC	5 cut(s)	500, 647, 921, 938, 1226
AfeI	AGCGCT	1 cut(s)	510
AfiI	CCNNNNNNNGG	6 cut(s)	221, 301, 536, 701, 749, 1479
AgeI	ACCGGT	1 cut(s)	1526
AgsI	TTSAA	8 cut(s)	316, 404, 985, 1112, 1340, 1362, 1844, 1920
AjnI	CCWGG	4 cut(s)	742, 1176, 1250, 1717
AjuI	GAANNNNNNNTTGG	2 cut(s)	1342, 1374
Alw21I	GWGCWC	2 cut(s)	799, 1731
Alw26I	GTCTC	5 cut(s)	580, 768, 1896, 2091, 2181
Alw44I	GTGCAC	1 cut(s)	795
AlwI	GGATC	4 cut(s)	286, 1697, 2191, 2237
Aor51HI	AGCGCT	1 cut(s)	510
AoxI	GGCC	6 cut(s)	541, 867, 965, 1319, 1438, 1712
ApaLI	GTGCAC	1 cut(s)	795
ApeKI	GCWGC	9 cut(s)	204, 638, 842, 909, 1423, 1753, 1806, 1953, 2237
ApoI	RAATTY	2 cut(s)	392, 1172
AsiGI	ACCGGT	1 cut(s)	1526
AspLEI	GCGC	4 cut(s)	414, 511, 1287, 1454
AspS9I	GGNCC	6 cut(s)	542, 704, 868, 965, 1320, 1641
AsuC2I	CCSGG	4 cut(s)	1660, 1676, 1707, 2078
AsuHPI	GGTGA	8 cut(s)	242, 263, 767, 890, 1179, 1541, 1606, 1690
AvaII	GGWCC	2 cut(s)	704, 1641
AxyI	CCTNAGG	1 cut(s)	1324
BaeGI	GKGCMC	1 cut(s)	799
BanI	GGYRCC	1 cut(s)	1247
BauI	CACGAG	2 cut(s)	954, 1203
BbsI	GAAGAC	2 cut(s)	431, 675
Bbv12I	GWGCWC	2 cut(s)	799, 1731
BbvI	GCAGC	9 cut(s)	216, 625, 854, 921, 1435, 1740, 1818, 1940, 2224
BccI	CCATC	7 cut(s)	94, 588, 899, 1238, 1455, 1501, 1843
BceAI	ACGGC	1 cut(s)	1182
BciT130I	CCWGG	4 cut(s)	744, 1178, 1252, 1719
BcnI	CCSGG	4 cut(s)	1660, 1676, 1707, 2078
BcoDI	GTCTC	5 cut(s)	580, 768, 1896, 2091, 2181
BfaI	CTAG	4 cut(s)	12, 512, 554, 1500
BfoI	RGCGCY	2 cut(s)	512, 1455
BglI	GCCNNNNNGGC	1 cut(s)	906
BglII	AGATCT	2 cut(s)	1304, 2142
BlpI	GCTNAGC	1 cut(s)	2169
Bme1390I	CCNGG	8 cut(s)	744, 1178, 1252, 1660, 1676, 1707, 1719, 2078
Bme18I	GGWCC	2 cut(s)	704, 1641
BmgT120I	GGNCC	6 cut(s)	542, 704, 868, 965, 1320, 1641
BmiI	GGNNCC	9 cut(s)	167, 226, 378, 1150, 1182, 1249, 1657, 2086, 2119
BmrFI	CCNGG	8 cut(s)	744, 1178, 1252, 1660, 1676, 1707, 1719, 2078
BmsI	GCATC	5 cut(s)	71, 295, 1319, 1520, 1631
BpiI	GAAGAC	2 cut(s)	431, 675
BplI	GAGNNNNNCTC	2 cut(s)	765, 797
BpmI	CTGGAG	3 cut(s)	792, 1632, 1701
Bpu1102I	GCTNAGC	1 cut(s)	2169
BpuMI	CCSGG	4 cut(s)	1660, 1676, 1707, 2078
Bsa29I	ATCGAT	1 cut(s)	618
BsaBI	GATNNNNATC	1 cut(s)	1059
BsaI	GGTCTC	1 cut(s)	768
BsaJI	CCNNGG	5 cut(s)	700, 1251, 1272, 1473, 1659
BsaWI	WCCGGW	2 cut(s)	227, 1526
BsaXI	ACNNNNNCTCC	2 cut(s)	718, 748
Bsc4I	CCNNNNNNNGG	6 cut(s)	221, 301, 536, 701, 749, 1479
Bse118I	RCCGGY	3 cut(s)	107, 1526, 2087
Bse1I	ACTGG	4 cut(s)	1129, 1757, 1882, 1991
Bse21I	CCTNAGG	1 cut(s)	1324
Bse3DI	GCAATG	4 cut(s)	46, 156, 1490, 1857
Bse8I	GATNNNNATC	1 cut(s)	1059
BseBI	CCWGG	4 cut(s)	744, 1178, 1252, 1719
BseCI	ATCGAT	1 cut(s)	618
BseDI	CCNNGG	5 cut(s)	700, 1251, 1272, 1473, 1659
BseGI	GGATG	6 cut(s)	897, 1060, 1334, 1399, 1518, 1705
BseJI	GATNNNNATC	1 cut(s)	1059
BseLI	CCNNNNNNNGG	6 cut(s)	221, 301, 536, 701, 749, 1479
BseMI	GCAATG	4 cut(s)	46, 156, 1490, 1857
BseMII	CTCAG	6 cut(s)	347, 443, 575, 796, 1338, 1744
BseNI	ACTGG	4 cut(s)	1129, 1757, 1882, 1991
BseSI	GKGCMC	1 cut(s)	799
BseXI	GCAGC	9 cut(s)	216, 625, 854, 921, 1435, 1740, 1818, 1940, 2224
BsgI	GTGCAG	3 cut(s)	101, 1029, 1281
Bsh1236I	CGCG	2 cut(s)	1000, 1791
Bsh1285I	CGRYCG	1 cut(s)	622
BshFI	GGCC	6 cut(s)	543, 869, 967, 1321, 1440, 1714
BshNI	GGYRCC	1 cut(s)	1247
BshTI	ACCGGT	1 cut(s)	1526
BshVI	ATCGAT	1 cut(s)	618
BsiEI	CGRYCG	1 cut(s)	622
BsiHKAI	GWGCWC	2 cut(s)	799, 1731
BslFI	GGGAC	2 cut(s)	309, 2144
BslI	CCNNNNNNNGG	6 cut(s)	221, 301, 536, 701, 749, 1479
BsmAI	GTCTC	5 cut(s)	580, 768, 1896, 2091, 2181
BsmFI	GGGAC	2 cut(s)	309, 2144
BsnI	GGCC	6 cut(s)	543, 869, 967, 1321, 1440, 1714
Bso31I	GGTCTC	1 cut(s)	768
Bsp1286I	GDGCHC	2 cut(s)	799, 1731
Bsp143I	GATC	9 cut(s)	291, 615, 619, 712, 1304, 1702, 2142, 2183, 2229
Bsp1720I	GCTNAGC	1 cut(s)	2169
BspACI	CCGC	7 cut(s)	222, 274, 439, 540, 753, 1737, 1789
BspANI	GGCC	6 cut(s)	543, 869, 967, 1321, 1440, 1714
BspCNI	CTCAG	6 cut(s)	348, 442, 576, 795, 1337, 1743
BspDI	ATCGAT	1 cut(s)	618
BspFNI	CGCG	2 cut(s)	1000, 1791
BspHI	TCATGA	2 cut(s)	1020, 2246
BspLI	GGNNCC	9 cut(s)	167, 226, 378, 1150, 1182, 1249, 1657, 2086, 2119
BspPI	GGATC	4 cut(s)	286, 1697, 2191, 2237
BspT107I	GGYRCC	1 cut(s)	1247
BspTNI	GGTCTC	1 cut(s)	768
BsrBI	CCGCTC	1 cut(s)	439
BsrDI	GCAATG	4 cut(s)	46, 156, 1490, 1857
BsrFI	RCCGGY	3 cut(s)	107, 1526, 2087
BsrI	ACTGG	4 cut(s)	1129, 1757, 1882, 1991
BssAI	RCCGGY	3 cut(s)	107, 1526, 2087
BssECI	CCNNGG	5 cut(s)	700, 1251, 1272, 1473, 1659
BssMI	GATC	9 cut(s)	291, 615, 619, 712, 1304, 1702, 2142, 2183, 2229
BssSI	CACGAG	2 cut(s)	954, 1203
BssT1I	CCWWGG	2 cut(s)	1272, 1473
Bst2BI	CACGAG	2 cut(s)	954, 1203
Bst2UI	CCWGG	4 cut(s)	744, 1178, 1252, 1719
Bst4CI	ACNGT	9 cut(s)	188, 248, 660, 919, 1075, 1650, 2131, 2197, 2221
Bst6I	CTCTTC	1 cut(s)	606
BstAPI	GCANNNNNTGC	1 cut(s)	1859
BstC8I	GCNNGC	6 cut(s)	834, 1239, 1383, 1571, 2089, 2215
BstDEI	CTNAG	7 cut(s)	356, 429, 584, 782, 1324, 1730, 2169
BstDSI	CCRYGG	1 cut(s)	700
BstENI	CCTNNNNNAGG	1 cut(s)	1477
BstF5I	GGATG	6 cut(s)	897, 1060, 1334, 1399, 1518, 1705
BstFNI	CGCG	2 cut(s)	1000, 1791
BstH2I	RGCGCY	2 cut(s)	512, 1455
BstHHI	GCGC	4 cut(s)	414, 511, 1287, 1454
BstKTI	GATC	9 cut(s)	294, 618, 622, 715, 1307, 1705, 2145, 2186, 2232
BstMAI	GTCTC	5 cut(s)	580, 768, 1896, 2091, 2181
BstMBI	GATC	9 cut(s)	291, 615, 619, 712, 1304, 1702, 2142, 2183, 2229
BstMCI	CGRYCG	1 cut(s)	622
BstMWI	GCNNNNNNNGC	7 cut(s)	439, 638, 842, 906, 1451, 1859, 1942
BstNI	CCWGG	4 cut(s)	744, 1178, 1252, 1719
BstNSI	RCATGY	5 cut(s)	22, 1241, 1385, 1573, 1936
BstSCI	CCNGG	8 cut(s)	742, 1176, 1250, 1658, 1674, 1705, 1717, 2076
BstSLI	GKGCMC	1 cut(s)	799
BstUI	CGCG	2 cut(s)	1000, 1791
BstV1I	GCAGC	9 cut(s)	216, 625, 854, 921, 1435, 1740, 1818, 1940, 2224
BstV2I	GAAGAC	2 cut(s)	431, 675
BstX2I	RGATCY	3 cut(s)	291, 1304, 2142
BstXI	CCANNNNNNTGG	2 cut(s)	1448, 2014
BstYI	RGATCY	3 cut(s)	291, 1304, 2142
Bsu15I	ATCGAT	1 cut(s)	618
Bsu36I	CCTNAGG	1 cut(s)	1324
BsuRI	GGCC	6 cut(s)	543, 869, 967, 1321, 1440, 1714
BsuTUI	ATCGAT	1 cut(s)	618
BtgI	CCRYGG	1 cut(s)	700
BtgZI	GCGATG	2 cut(s)	1520, 1806
BtsCI	GGATG	6 cut(s)	897, 1060, 1334, 1399, 1518, 1705
BtsI	GCAGTG	1 cut(s)	2163
BtsIMutI	CAGTG	9 cut(s)	193, 799, 1070, 1646, 1738, 1875, 2127, 2163, 2217
Cac8I	GCNNGC	6 cut(s)	834, 1239, 1383, 1571, 2089, 2215
CciI	TCATGA	2 cut(s)	1020, 2246
CfoI	GCGC	4 cut(s)	414, 511, 1287, 1454
Cfr10I	RCCGGY	3 cut(s)	107, 1526, 2087
Cfr13I	GGNCC	6 cut(s)	542, 704, 868, 965, 1320, 1641
ClaI	ATCGAT	1 cut(s)	618
Csp6I	GTAC	5 cut(s)	499, 646, 920, 937, 1225
CspAI	ACCGGT	1 cut(s)	1526
CspCI	CAANNNNNGTGG	2 cut(s)	1110, 1145
CviQI	GTAC	5 cut(s)	499, 646, 920, 937, 1225
DdeI	CTNAG	7 cut(s)	356, 429, 584, 782, 1324, 1730, 2169
DpnI	GATC	9 cut(s)	293, 617, 621, 714, 1306, 1704, 2144, 2185, 2231
DpnII	GATC	9 cut(s)	291, 615, 619, 712, 1304, 1702, 2142, 2183, 2229
DraIII	CACNNNGTG	1 cut(s)	803
DrdI	GACNNNNNNGTC	1 cut(s)	1648
DseDI	GACNNNNNNGTC	1 cut(s)	1648
EaeI	YGGCCR	1 cut(s)	1438
Eam1104I	CTCTTC	1 cut(s)	606
EarI	CTCTTC	1 cut(s)	606
Eco130I	CCWWGG	2 cut(s)	1272, 1473
Eco147I	AGGCCT	1 cut(s)	1714
Eco31I	GGTCTC	1 cut(s)	768
Eco47I	GGWCC	2 cut(s)	704, 1641
Eco47III	AGCGCT	1 cut(s)	510
Eco57I	CTGAAG	4 cut(s)	54, 237, 1011, 1407
Eco81I	CCTNAGG	1 cut(s)	1324
EcoNI	CCTNNNNNAGG	1 cut(s)	1477
EcoO109I	RGGNCCY	1 cut(s)	1320
EcoRI	GAATTC	1 cut(s)	1172
EcoRII	CCWGG	4 cut(s)	742, 1176, 1250, 1717
EcoT14I	CCWWGG	2 cut(s)	1272, 1473
ErhI	CCWWGG	2 cut(s)	1272, 1473
FaqI	GGGAC	2 cut(s)	309, 2144
FblI	GTMKAC	2 cut(s)	250, 1070
FokI	GGATG	6 cut(s)	904, 1067, 1341, 1406, 1505, 1712
FspBI	CTAG	4 cut(s)	12, 512, 554, 1500
GlaI	GCGC	4 cut(s)	413, 510, 1286, 1453
GsuI	CTGGAG	3 cut(s)	792, 1632, 1701
HaeII	RGCGCY	2 cut(s)	512, 1455
HaeIII	GGCC	6 cut(s)	543, 869, 967, 1321, 1440, 1714
HhaI	GCGC	4 cut(s)	414, 511, 1287, 1454
Hin6I	GCGC	4 cut(s)	412, 509, 1285, 1452
HinP1I	GCGC	4 cut(s)	412, 509, 1285, 1452
HincII	GTYRAC	4 cut(s)	251, 1071, 1996, 2200
HindII	GTYRAC	4 cut(s)	251, 1071, 1996, 2200
HindIII	AAGCTT	2 cut(s)	306, 993
HpaI	GTTAAC	1 cut(s)	2200
HphI	GGTGA	8 cut(s)	242, 263, 767, 890, 1179, 1541, 1606, 1690
Hpy166II	GTNNAC	8 cut(s)	251, 707, 797, 881, 1071, 1408, 1996, 2200
Hpy8I	GTNNAC	8 cut(s)	251, 707, 797, 881, 1071, 1408, 1996, 2200
Hpy99I	CGWCG	2 cut(s)	252, 575
HpyCH4III	ACNGT	9 cut(s)	188, 248, 660, 919, 1075, 1650, 2131, 2197, 2221
HpyCH4IV	ACGT	2 cut(s)	648, 1492
HpyF10VI	GCNNNNNNNGC	7 cut(s)	439, 638, 842, 906, 1451, 1859, 1942
HpyF3I	CTNAG	7 cut(s)	356, 429, 584, 782, 1324, 1730, 2169
HpySE526I	ACGT	2 cut(s)	648, 1492
HspAI	GCGC	4 cut(s)	412, 509, 1285, 1452
KroI	GCCGGC	1 cut(s)	2087
KroNI	GCCGGC	1 cut(s)	2089
KspAI	GTTAAC	1 cut(s)	2200
Kzo9I	GATC	9 cut(s)	291, 615, 619, 712, 1304, 1702, 2142, 2183, 2229
LmnI	GCTCC	5 cut(s)	483, 726, 1148, 1439, 2084
Lsp1109I	GCAGC	9 cut(s)	216, 625, 854, 921, 1435, 1740, 1818, 1940, 2224
LweI	GCATC	5 cut(s)	71, 295, 1319, 1520, 1631
MaeI	CTAG	4 cut(s)	12, 512, 554, 1500
MaeII	ACGT	2 cut(s)	648, 1492
MaeIII	GTNAC	4 cut(s)	230, 1366, 1871, 2030
MalI	GATC	9 cut(s)	293, 617, 621, 714, 1306, 1704, 2144, 2185, 2231
MbiI	CCGCTC	1 cut(s)	439
MboI	GATC	9 cut(s)	291, 615, 619, 712, 1304, 1702, 2142, 2183, 2229
MboII	GAAGA	6 cut(s)	60, 436, 623, 675, 941, 2045
MflI	RGATCY	3 cut(s)	291, 1304, 2142
MhlI	GDGCHC	2 cut(s)	799, 1731
MlyI	GAGTC	6 cut(s)	69, 421, 582, 969, 1782, 2093
MmeI	TCCRAC	2 cut(s)	1223, 1516
MroNI	GCCGGC	1 cut(s)	2087
MseI	TTAA	4 cut(s)	51, 924, 1032, 2199
MslI	CAYNNNNRTG	6 cut(s)	333, 419, 1055, 1242, 2012, 2245
MspA1I	CMGCKG	1 cut(s)	1426
MspR9I	CCNGG	8 cut(s)	744, 1178, 1252, 1660, 1676, 1707, 1719, 2078
MvaI	CCWGG	4 cut(s)	744, 1178, 1252, 1719
MvnI	CGCG	2 cut(s)	1000, 1791
MwoI	GCNNNNNNNGC	7 cut(s)	439, 638, 842, 906, 1451, 1859, 1942
NaeI	GCCGGC	1 cut(s)	2089
NciI	CCSGG	4 cut(s)	1660, 1676, 1707, 2078
NdeII	GATC	9 cut(s)	291, 615, 619, 712, 1304, 1702, 2142, 2183, 2229
NgoMIV	GCCGGC	1 cut(s)	2087
NlaIV	GGNNCC	9 cut(s)	167, 226, 378, 1150, 1182, 1249, 1657, 2086, 2119
NmuCI	GTSAC	3 cut(s)	230, 1871, 2030
NspI	RCATGY	5 cut(s)	22, 1241, 1385, 1573, 1936
PaeI	GCATGC	3 cut(s)	1241, 1385, 1573
PagI	TCATGA	2 cut(s)	1020, 2246
PceI	AGGCCT	1 cut(s)	1714
PdiI	GCCGGC	1 cut(s)	2089
PfeI	GAWTC	4 cut(s)	4, 1045, 1060, 2153
PflMI	CCANNNNNTGG	1 cut(s)	301
PfoI	TCCNGGA	2 cut(s)	1705, 2076
PinAI	ACCGGT	1 cut(s)	1526
Ple19I	CGATCG	1 cut(s)	622
PleI	GAGTC	6 cut(s)	69, 421, 582, 968, 1781, 2093
PpsI	GAGTC	6 cut(s)	69, 421, 582, 968, 1781, 2093
Psp6I	CCWGG	4 cut(s)	742, 1176, 1250, 1717
PspGI	CCWGG	4 cut(s)	742, 1176, 1250, 1717
PspN4I	GGNNCC	9 cut(s)	167, 226, 378, 1150, 1182, 1249, 1657, 2086, 2119
PspPI	GGNCC	6 cut(s)	542, 704, 868, 965, 1320, 1641
PsuI	RGATCY	3 cut(s)	291, 1304, 2142
PvuI	CGATCG	1 cut(s)	622
PvuII	CAGCTG	1 cut(s)	1426
RsaI	GTAC	5 cut(s)	500, 647, 921, 938, 1226
RsaNI	GTAC	5 cut(s)	499, 646, 920, 937, 1225
RseI	CAYNNNNRTG	6 cut(s)	333, 419, 1055, 1242, 2012, 2245
SalI	GTCGAC	2 cut(s)	249, 1069
SaqAI	TTAA	4 cut(s)	51, 924, 1032, 2199
Sau3AI	GATC	9 cut(s)	291, 615, 619, 712, 1304, 1702, 2142, 2183, 2229
Sau96I	GGNCC	6 cut(s)	542, 704, 868, 965, 1320, 1641
SchI	GAGTC	6 cut(s)	69, 421, 582, 969, 1782, 2093
ScrFI	CCNGG	8 cut(s)	744, 1178, 1252, 1660, 1676, 1707, 1719, 2078
SduI	GDGCHC	2 cut(s)	799, 1731
SfaNI	GCATC	5 cut(s)	71, 295, 1319, 1520, 1631
SinI	GGWCC	2 cut(s)	704, 1641
SmiMI	CAYNNNNRTG	6 cut(s)	333, 419, 1055, 1242, 2012, 2245
SphI	GCATGC	3 cut(s)	1241, 1385, 1573
SseBI	AGGCCT	1 cut(s)	1714
SsiI	CCGC	7 cut(s)	222, 274, 439, 540, 753, 1737, 1789
SspMI	CTAG	4 cut(s)	12, 512, 554, 1500
StuI	AGGCCT	1 cut(s)	1714
StyD4I	CCNGG	8 cut(s)	742, 1176, 1250, 1658, 1674, 1705, 1717, 2076
StyI	CCWWGG	2 cut(s)	1272, 1473
TaaI	ACNGT	9 cut(s)	188, 248, 660, 919, 1075, 1650, 2131, 2197, 2221
TaiI	ACGT	2 cut(s)	651, 1495
TaqI	TCGA	8 cut(s)	26, 183, 250, 570, 591, 601, 618, 1070
TatI	WGTACW	1 cut(s)	936
TauI	GCSGC	3 cut(s)	442, 543, 1739
TfiI	GAWTC	4 cut(s)	4, 1045, 1060, 2153
Tru1I	TTAA	4 cut(s)	51, 924, 1032, 2199
Tru9I	TTAA	4 cut(s)	51, 924, 1032, 2199
TscAI	CASTG	9 cut(s)	193, 799, 1070, 1653, 1738, 1882, 2134, 2170, 2224
TseFI	GTSAC	3 cut(s)	230, 1871, 2030
TseI	GCWGC	9 cut(s)	204, 638, 842, 909, 1423, 1753, 1806, 1953, 2237
Tsp45I	GTSAC	3 cut(s)	230, 1871, 2030
TspDTI	ATGAA	5 cut(s)	437, 942, 1037, 1410, 2024
TspGWI	ACGGA	2 cut(s)	470, 2097
TspRI	CASTG	9 cut(s)	193, 799, 1070, 1653, 1738, 1882, 2134, 2170, 2224
Van91I	CCANNNNNTGG	1 cut(s)	301
VneI	GTGCAC	1 cut(s)	795
VpaK11BI	GGWCC	2 cut(s)	704, 1641
XagI	CCTNNNNNAGG	1 cut(s)	1477
XapI	RAATTY	2 cut(s)	392, 1172
XceI	RCATGY	5 cut(s)	22, 1241, 1385, 1573, 1936
XmiI	GTMKAC	2 cut(s)	250, 1070
XspI	CTAG	4 cut(s)	12, 512, 554, 1500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.