Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001866

Physical Location & Seq

Genomic Coordinates Forward (+)

12124065 .. 12127073

Gene Structure 3009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00090370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGTATATTCAAGGAAATGTTATGCGGTCAATCGGTGCACCTAGTGAGGCAGATAAGCCCATGATTATTGAGCTTGCAGGTGCAGCTATGGAGGAGCTAATCCGAATGGCTCAAATCGGCGAACCTTTGTGGATGAATAGCACTGCTGGATCATTCACTGTGCTTAATGAGGACGAGTACATTCGAAAATTTCCTCGTGGAATTGTGCCAAGACAATCTGGATACAAATTTGAAGCTTCGCCGGAGAGTGCTGTTGTCATTATGAACCACAATAACCTTGTTGAGATTCTCATGGATGTGTGTAACATTGATAGCGAAACGTTTTTGAATACGTACATACAATTTAATGCCTCAGAAGGTAAAGGAATCACAGCAGAATTTCAAGCACCATCTCCACTGGTTCCAACTCGTGAGAGTTATTTTGTGAGGTACTGTAAGAAGCATGTCGATGGCACTTGGGCAGTGGTTGATGTCTCCTTGGACAATCAACGCGGCTATACTTCTGCTGTGAAGTCATGTCAAAGAAGACCTGAAGTTGTCTCATCCAAGAAATGCCAACTGGATACTCAAAGGTTACTTGGGTTGAGCATGTACAAGTGGATGAAAGAGGTGTTCACAATCTGTACAAGCAGCTGGTCAACTCTGGCCATGCATTCGGGGCAAAACGATGGGTTGCGACCTTGGACTGCCAATGTGAGCGTCTCGCCAACGCCTTGGCAACAAACATCCCTACCGGAAGAGCATGTTGAAGCTGGCCGAGAGAATGGTTATAAGTTTCTATGCTGGAGTGCATCTACCACTCATACATGGACAACGCTGTCTGGAACAGGGGCTGATGATGTTATTGTGATGACCCGAAAGAGTGTGGATGATCCAGGAAGGCCTTTGGGCATTGTTCTCATCGCTGCAACCTCATTTTGGCTTCCTGTGCCCCCAAAGGGGGTCTTTGAGTTCCTTCGTGATAAGAACTCTCGAAATGTGTGGGATATCCTCTCCGATAATGGCGTTGTGCAAGAAATGGTGCACATTGTCAACGGACGCGACACTAGGAACTGCGTGTCACTACTTCGAGTAAATAGTTTGGGCCACTCCATCCATTGCCAATTGGTTTTGGATGTGAACCCCGATTACACTATCAAGAGCAACATGCTCATTCTCAGCAGAGAGCTGCACCGACTCAACGGCATCATATGTAATCTATGCCCCCGTGGACATAGTTGCTATGAATGTCGTGCCGAGTGGCATGATCCCAACTACGTTGCCCTTCTCGCCATCCGGGTTTGCTATACTCCCGCATGGAATCGGTGGGAGCAACAGCAGGGGAAGCCGATGAGTCCGGGGAGGGGGGTGTCCTTGTTGATTGTTGCCTTCCAGATCCTTGTGGATTCAAATCACACCGCAAAGCTATCCCTAGGGTCCGTGACAACAGTCAACAACTTGATAGCCTGCACCGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

485

Amino Acids

54.22

Weight (kDa)

6.64

Isoelectric Point (pI)

37.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	24 - 168	1.2e-16	START domain
PDF2_C	PF25797	263 - 485	1.2e-41	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230
fragaria_vesca	FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390
malus_domestica	MD09G1107300.v1.1 MD17G1095000.v1.1
prunus_persica	Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1
pyrus_communis	pycom09g02950 pycom17g09140
rosa_chinensis	RchiOBHm_Chr2g0159731
rosa_laevigata	RLG00000021177
rosa_multiflora	Rmu_sc0004966.1_g000003
rosa_roxburghii	Rroxscaffold_2G00090270 Rroxscaffold_2G00090370
rosa_rugosa	Rorug02G0478100 Rorug02G0478200 Rorug02G0478300
rosa_samantha	Rh2AG544900 Rh2BG557700 Rh2CG528000 Rh2DG567200
rosa_wichuraiana	Rw2G045060 Rw3G015270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	771
AarI	CACCTGC	1 cut(s)	68
AasI	GACNNNNNNGTC	1 cut(s)	817
Acc36I	ACCTGC	1 cut(s)	68
AccII	CGCG	2 cut(s)	492, 1041
AciI	CCGC	4 cut(s)	25, 492, 1293, 1398
AclI	AACGTT	1 cut(s)	320
AclWI	GGATC	4 cut(s)	157, 866, 1241, 1369
AcoI	YGGCCR	2 cut(s)	645, 754
AcsI	RAATTY	3 cut(s)	188, 227, 377
AcuI	CTGAAG	1 cut(s)	552
AdeI	CACNNNGTG	1 cut(s)	44
AfaI	GTAC	5 cut(s)	179, 335, 431, 593, 625
AfiI	CCNNNNNNNGG	5 cut(s)	918, 938, 939, 940, 1343
AgsI	TTSAA	6 cut(s)	11, 233, 328, 383, 749, 1389
AjnI	CCWGG	1 cut(s)	874
AluBI	AGCT	8 cut(s)	73, 86, 97, 236, 633, 752, 1168, 1405
AluI	AGCT	8 cut(s)	73, 86, 97, 236, 633, 752, 1168, 1405
Alw21I	GWGCWC	2 cut(s)	40, 1026
Alw26I	GTCTC	3 cut(s)	478, 544, 706
Alw44I	GTGCAC	2 cut(s)	36, 1022
AlwI	GGATC	4 cut(s)	157, 866, 1241, 1369
AlwNI	CAGNNNCTG	1 cut(s)	833
AoxI	GGCC	4 cut(s)	645, 754, 881, 1084
ApaLI	GTGCAC	2 cut(s)	36, 1022
ApeKI	GCWGC	4 cut(s)	83, 630, 905, 1168
ApoI	RAATTY	3 cut(s)	188, 227, 377
AspA2I	CCTAGG	1 cut(s)	1411
AspS9I	GGNCC	2 cut(s)	1084, 1416
AsuC2I	CCSGG	2 cut(s)	1277, 1338
AsuII	TTCGAA	1 cut(s)	184
AvaII	GGWCC	1 cut(s)	1416
AvrII	CCTAGG	1 cut(s)	1411
BaeGI	GKGCMC	3 cut(s)	40, 933, 1026
BalI	TGGCCA	1 cut(s)	647
BauI	CACGAG	2 cut(s)	195, 408
BbsI	GAAGAC	1 cut(s)	532
Bbv12I	GWGCWC	2 cut(s)	40, 1026
BbvI	GCAGC	4 cut(s)	95, 642, 892, 1155
BccI	CCATC	5 cut(s)	397, 443, 662, 1100, 1280
BceAI	ACGGC	1 cut(s)	1198
BciT130I	CCWGG	1 cut(s)	876
BciVI	GTATCC	2 cut(s)	215, 556
BcnI	CCSGG	2 cut(s)	1277, 1338
BcoDI	GTCTC	3 cut(s)	478, 544, 706
BfaI	CTAG	3 cut(s)	42, 1047, 1412
BfuAI	ACCTGC	1 cut(s)	68
BfuI	GTATCC	2 cut(s)	215, 556
BisI	GCNGC	5 cut(s)	84, 493, 631, 906, 1169
BlnI	CCTAGG	1 cut(s)	1411
BlsI	GCNGC	5 cut(s)	85, 494, 632, 907, 1170
Bme1390I	CCNGG	3 cut(s)	876, 1277, 1338
Bme18I	GGWCC	1 cut(s)	1416
BmgT120I	GGNCC	2 cut(s)	1084, 1416
BmiI	GGNNCC	2 cut(s)	402, 1417
BmrFI	CCNGG	3 cut(s)	876, 1277, 1338
BmsI	GCATC	2 cut(s)	800, 1194
BoxI	GACNNNNGTC	1 cut(s)	1427
BpiI	GAAGAC	1 cut(s)	532
BpmI	CTGGAG	1 cut(s)	805
Bpu14I	TTCGAA	1 cut(s)	184
BpuMI	CCSGG	2 cut(s)	1277, 1338
BsaAI	YACGTR	1 cut(s)	333
BsaBI	GATNNNNATC	1 cut(s)	1389
BsaJI	CCNNGG	6 cut(s)	477, 680, 713, 1207, 1337, 1411
BsaWI	WCCGGW	1 cut(s)	733
Bsc4I	CCNNNNNNNGG	5 cut(s)	918, 938, 939, 940, 1343
Bse1I	ACTGG	2 cut(s)	402, 564
Bse3DI	GCAATG	1 cut(s)	1096
Bse8I	GATNNNNATC	1 cut(s)	1389
BseBI	CCWGG	1 cut(s)	876
BseDI	CCNNGG	6 cut(s)	477, 680, 713, 1207, 1337, 1411
BseGI	GGATG	9 cut(s)	138, 301, 542, 606, 725, 874, 1092, 1120, 1272
BseJI	GATNNNNATC	1 cut(s)	1389
BseLI	CCNNNNNNNGG	5 cut(s)	918, 938, 939, 940, 1343
BseMI	GCAATG	1 cut(s)	1096
BseMII	CTCAG	2 cut(s)	366, 1171
BseNI	ACTGG	2 cut(s)	402, 564
BseRI	GAGGAG	1 cut(s)	107
BseSI	GKGCMC	3 cut(s)	40, 933, 1026
BseXI	GCAGC	4 cut(s)	95, 642, 892, 1155
BsgI	GTGCAG	3 cut(s)	102, 1154, 1432
Bsh1236I	CGCG	2 cut(s)	492, 1041
BshFI	GGCC	4 cut(s)	647, 756, 883, 1086
BsiHKAI	GWGCWC	2 cut(s)	40, 1026
BsiSI	CCGG	4 cut(s)	242, 734, 1276, 1337
BslI	CCNNNNNNNGG	5 cut(s)	918, 938, 939, 940, 1343
BsmAI	GTCTC	3 cut(s)	478, 544, 706
BsmBI	CGTCTC	1 cut(s)	706
BsmI	GAATGC	1 cut(s)	652
BsnI	GGCC	4 cut(s)	647, 756, 883, 1086
Bsp119I	TTCGAA	1 cut(s)	184
Bsp1286I	GDGCHC	3 cut(s)	40, 933, 1026
Bsp1407I	TGTACA	2 cut(s)	591, 623
Bsp143I	GATC	4 cut(s)	149, 871, 1246, 1374
BspACI	CCGC	4 cut(s)	25, 492, 1293, 1398
BspANI	GGCC	4 cut(s)	647, 756, 883, 1086
BspCNI	CTCAG	2 cut(s)	365, 1170
BspFNI	CGCG	2 cut(s)	492, 1041
BspLI	GGNNCC	2 cut(s)	402, 1417
BspMI	ACCTGC	1 cut(s)	68
BspPI	GGATC	4 cut(s)	157, 866, 1241, 1369
BspQI	GCTCTTC	1 cut(s)	732
BspT104I	TTCGAA	1 cut(s)	184
BsrDI	GCAATG	1 cut(s)	1096
BsrGI	TGTACA	2 cut(s)	591, 623
BsrI	ACTGG	2 cut(s)	402, 564
BssECI	CCNNGG	6 cut(s)	477, 680, 713, 1207, 1337, 1411
BssMI	GATC	4 cut(s)	149, 871, 1246, 1374
BssSI	CACGAG	2 cut(s)	195, 408
BssT1I	CCWWGG	4 cut(s)	477, 680, 713, 1411
Bst2BI	CACGAG	2 cut(s)	195, 408
Bst2UI	CCWGG	1 cut(s)	876
Bst4CI	ACNGT	4 cut(s)	160, 434, 1429, 1453
Bst6I	CTCTTC	1 cut(s)	732
BstAUI	TGTACA	2 cut(s)	591, 623
BstBAI	YACGTR	1 cut(s)	333
BstBI	TTCGAA	1 cut(s)	184
BstC8I	GCNNGC	3 cut(s)	75, 754, 1447
BstDEI	CTNAG	2 cut(s)	352, 1157
BstDSI	CCRYGG	1 cut(s)	1207
BstF5I	GGATG	9 cut(s)	138, 301, 542, 606, 725, 874, 1092, 1120, 1272
BstFNI	CGCG	2 cut(s)	492, 1041
BstKTI	GATC	4 cut(s)	152, 874, 1249, 1377
BstMAI	GTCTC	3 cut(s)	478, 544, 706
BstMBI	GATC	4 cut(s)	149, 871, 1246, 1374
BstMWI	GCNNNNNNNGC	5 cut(s)	83, 658, 928, 1268, 1324
BstNI	CCWGG	1 cut(s)	876
BstNSI	RCATGY	4 cut(s)	446, 592, 746, 1150
BstPAI	GACNNNNGTC	1 cut(s)	1427
BstSCI	CCNGG	3 cut(s)	874, 1275, 1336
BstSLI	GKGCMC	3 cut(s)	40, 933, 1026
BstSNI	TACGTA	1 cut(s)	333
BstUI	CGCG	2 cut(s)	492, 1041
BstV1I	GCAGC	4 cut(s)	95, 642, 892, 1155
BstV2I	GAAGAC	1 cut(s)	532
BstX2I	RGATCY	1 cut(s)	1374
BstXI	CCANNNNNNTGG	1 cut(s)	714
BstYI	RGATCY	1 cut(s)	1374
BsuI	GTATCC	2 cut(s)	215, 556
BsuRI	GGCC	4 cut(s)	647, 756, 883, 1086
BtgI	CCRYGG	1 cut(s)	1207
BtgZI	GCGATG	1 cut(s)	886
BtsCI	GGATG	9 cut(s)	138, 301, 542, 606, 725, 874, 1092, 1120, 1272
BtsI	GCAGTG	2 cut(s)	141, 468
BtsIMutI	CAGTG	4 cut(s)	141, 156, 395, 468
BveI	ACCTGC	1 cut(s)	68
Cac8I	GCNNGC	3 cut(s)	75, 754, 1447
CaiI	CAGNNNCTG	1 cut(s)	833
Cfr13I	GGNCC	2 cut(s)	1084, 1416
CseI	GACGC	2 cut(s)	688, 1047
Csp6I	GTAC	5 cut(s)	178, 334, 430, 592, 624
CviQI	GTAC	5 cut(s)	178, 334, 430, 592, 624
DdeI	CTNAG	2 cut(s)	352, 1157
DpnI	GATC	4 cut(s)	151, 873, 1248, 1376
DpnII	GATC	4 cut(s)	149, 871, 1246, 1374
DraIII	CACNNNGTG	1 cut(s)	44
DrdI	GACNNNNNNGTC	1 cut(s)	817
DseDI	GACNNNNNNGTC	1 cut(s)	817
EaeI	YGGCCR	2 cut(s)	645, 754
Eam1104I	CTCTTC	1 cut(s)	732
EarI	CTCTTC	1 cut(s)	732
Eco105I	TACGTA	1 cut(s)	333
Eco130I	CCWWGG	4 cut(s)	477, 680, 713, 1411
Eco147I	AGGCCT	1 cut(s)	883
Eco32I	GATATC	1 cut(s)	988
Eco47I	GGWCC	1 cut(s)	1416
Eco57I	CTGAAG	1 cut(s)	552
EcoRII	CCWGG	1 cut(s)	874
EcoRV	GATATC	1 cut(s)	988
EcoT14I	CCWWGG	4 cut(s)	477, 680, 713, 1411
EcoT22I	ATGCAT	1 cut(s)	654
ErhI	CCWWGG	4 cut(s)	477, 680, 713, 1411
Esp3I	CGTCTC	1 cut(s)	706
FalI	AAGNNNNNCTT	2 cut(s)	929, 961
FauI	CCCGC	1 cut(s)	1300
FauNDI	CATATG	1 cut(s)	1190
Fnu4HI	GCNGC	5 cut(s)	84, 493, 631, 906, 1169
FokI	GGATG	9 cut(s)	145, 308, 529, 613, 712, 881, 1079, 1127, 1259
Fsp4HI	GCNGC	5 cut(s)	84, 493, 631, 906, 1169
FspBI	CTAG	3 cut(s)	42, 1047, 1412
GluI	GCNGC	5 cut(s)	84, 493, 631, 906, 1169
GsuI	CTGGAG	1 cut(s)	805
HaeIII	GGCC	4 cut(s)	647, 756, 883, 1086
HapII	CCGG	4 cut(s)	242, 734, 1276, 1337
HgaI	GACGC	2 cut(s)	688, 1047
HincII	GTYRAC	3 cut(s)	639, 1033, 1432
HindII	GTYRAC	3 cut(s)	639, 1033, 1432
HindIII	AAGCTT	1 cut(s)	234
HinfI	GANTC	6 cut(s)	286, 366, 1176, 1300, 1333, 1385
HpaII	CCGG	4 cut(s)	242, 734, 1276, 1337
Hpy166II	GTNNAC	8 cut(s)	38, 615, 639, 1024, 1033, 1120, 1211, 1432
Hpy188I	TCNGA	3 cut(s)	104, 355, 997
Hpy188III	TCNNGA	7 cut(s)	219, 410, 822, 959, 972, 1138, 1372
Hpy8I	GTNNAC	8 cut(s)	38, 615, 639, 1024, 1033, 1120, 1211, 1432
HpyAV	CCTTC	5 cut(s)	350, 873, 965, 1274, 1378
HpyCH4III	ACNGT	4 cut(s)	160, 434, 1429, 1453
HpyCH4IV	ACGT	3 cut(s)	320, 332, 1257
HpyF10VI	GCNNNNNNNGC	5 cut(s)	83, 658, 928, 1268, 1324
HpyF3I	CTNAG	2 cut(s)	352, 1157
HpySE526I	ACGT	3 cut(s)	320, 332, 1257
Kzo9I	GATC	4 cut(s)	149, 871, 1246, 1374
LguI	GCTCTTC	1 cut(s)	732
LmnI	GCTCC	2 cut(s)	94, 1309
Lsp1109I	GCAGC	4 cut(s)	95, 642, 892, 1155
LweI	GCATC	2 cut(s)	800, 1194
MaeI	CTAG	3 cut(s)	42, 1047, 1412
MaeII	ACGT	3 cut(s)	320, 332, 1257
MaeIII	GTNAC	4 cut(s)	302, 573, 1059, 1420
MalI	GATC	4 cut(s)	151, 873, 1248, 1376
MboI	GATC	4 cut(s)	149, 871, 1246, 1374
MboII	GAAGA	2 cut(s)	537, 749
MfeI	CAATTG	1 cut(s)	1103
MflI	RGATCY	1 cut(s)	1374
MhlI	GDGCHC	3 cut(s)	40, 933, 1026
MlsI	TGGCCA	1 cut(s)	647
MluCI	AATT	6 cut(s)	188, 201, 227, 341, 377, 1103
MluNI	TGGCCA	1 cut(s)	647
MlyI	GAGTC	2 cut(s)	1170, 1342
MmeI	TCCRAC	1 cut(s)	428
Mox20I	TGGCCA	1 cut(s)	647
Mph1103I	ATGCAT	1 cut(s)	654
MscI	TGGCCA	1 cut(s)	647
MseI	TTAA	2 cut(s)	165, 345
MslI	CAYNNNNRTG	2 cut(s)	296, 447
Msp20I	TGGCCA	1 cut(s)	647
MspA1I	CMGCKG	1 cut(s)	633
MspI	CCGG	4 cut(s)	242, 734, 1276, 1337
MspR9I	CCNGG	3 cut(s)	876, 1277, 1338
MunI	CAATTG	1 cut(s)	1103
Mva1269I	GAATGC	1 cut(s)	652
MvaI	CCWGG	1 cut(s)	876
MvnI	CGCG	2 cut(s)	492, 1041
MwoI	GCNNNNNNNGC	5 cut(s)	83, 658, 928, 1268, 1324
NciI	CCSGG	2 cut(s)	1277, 1338
NdeI	CATATG	1 cut(s)	1190
NdeII	GATC	4 cut(s)	149, 871, 1246, 1374
NlaIV	GGNNCC	2 cut(s)	402, 1417
NmeAIII	GCCGAG	2 cut(s)	782, 1261
NmuCI	GTSAC	2 cut(s)	1059, 1420
NsiI	ATGCAT	1 cut(s)	654
NspI	RCATGY	4 cut(s)	446, 592, 746, 1150
NspV	TTCGAA	1 cut(s)	184
PaqCI	CACCTGC	1 cut(s)	68
PceI	AGGCCT	1 cut(s)	883
PciSI	GCTCTTC	1 cut(s)	732
PctI	GAATGC	1 cut(s)	652
PfeI	GAWTC	4 cut(s)	286, 366, 1300, 1385
PfoI	TCCNGGA	1 cut(s)	874
PkrI	GCNGC	5 cut(s)	85, 494, 632, 907, 1170
PleI	GAGTC	2 cut(s)	1170, 1341
PpsI	GAGTC	2 cut(s)	1170, 1341
Ppu21I	YACGTR	1 cut(s)	333
PshAI	GACNNNNGTC	1 cut(s)	1427
PsiI	TTATAA	1 cut(s)	771
Psp1406I	AACGTT	1 cut(s)	320
Psp6I	CCWGG	1 cut(s)	874
PspGI	CCWGG	1 cut(s)	874
PspN4I	GGNNCC	2 cut(s)	402, 1417
PspPI	GGNCC	2 cut(s)	1084, 1416
PsrI	GAACNNNNNNTAC	2 cut(s)	1112, 1144
PstNI	CAGNNNCTG	1 cut(s)	833
PsuI	RGATCY	1 cut(s)	1374
PvuII	CAGCTG	1 cut(s)	633
RsaI	GTAC	5 cut(s)	179, 335, 431, 593, 625
RsaNI	GTAC	5 cut(s)	178, 334, 430, 592, 624
RseI	CAYNNNNRTG	2 cut(s)	296, 447
SapI	GCTCTTC	1 cut(s)	732
SaqAI	TTAA	2 cut(s)	165, 345
SatI	GCNGC	5 cut(s)	84, 493, 631, 906, 1169
Sau3AI	GATC	4 cut(s)	149, 871, 1246, 1374
Sau96I	GGNCC	2 cut(s)	1084, 1416
SchI	GAGTC	2 cut(s)	1170, 1342
ScrFI	CCNGG	3 cut(s)	876, 1277, 1338
SduI	GDGCHC	3 cut(s)	40, 933, 1026
SfaNI	GCATC	2 cut(s)	800, 1194
SfuI	TTCGAA	1 cut(s)	184
SinI	GGWCC	1 cut(s)	1416
SmiMI	CAYNNNNRTG	2 cut(s)	296, 447
SnaBI	TACGTA	1 cut(s)	333
Sse9I	AATT	6 cut(s)	188, 201, 227, 341, 377, 1103
SseBI	AGGCCT	1 cut(s)	883
SsiI	CCGC	4 cut(s)	25, 492, 1293, 1398
SspMI	CTAG	3 cut(s)	42, 1047, 1412
StuI	AGGCCT	1 cut(s)	883
StyD4I	CCNGG	3 cut(s)	874, 1275, 1336
StyI	CCWWGG	4 cut(s)	477, 680, 713, 1411
TaaI	ACNGT	4 cut(s)	160, 434, 1429, 1453
TaiI	ACGT	3 cut(s)	323, 335, 1260
TaqI	TCGA	4 cut(s)	184, 447, 973, 1069
TasI	AATT	6 cut(s)	188, 201, 227, 341, 377, 1103
TatI	WGTACW	3 cut(s)	177, 591, 623
TauI	GCSGC	1 cut(s)	495
TfiI	GAWTC	4 cut(s)	286, 366, 1300, 1385
Tru1I	TTAA	2 cut(s)	165, 345
Tru9I	TTAA	2 cut(s)	165, 345
TscAI	CASTG	4 cut(s)	148, 163, 402, 468
TseFI	GTSAC	2 cut(s)	1059, 1420
TseI	GCWGC	4 cut(s)	83, 630, 905, 1168
Tsp45I	GTSAC	2 cut(s)	1059, 1420
TspDTI	ATGAA	4 cut(s)	149, 278, 617, 1239
TspGWI	ACGGA	2 cut(s)	1050, 1408
TspRI	CASTG	4 cut(s)	148, 163, 402, 468
VneI	GTGCAC	2 cut(s)	36, 1022
VpaK11BI	GGWCC	1 cut(s)	1416
XapI	RAATTY	3 cut(s)	188, 227, 377
XceI	RCATGY	4 cut(s)	446, 592, 746, 1150
XmaJI	CCTAGG	1 cut(s)	1411
XspI	CTAG	3 cut(s)	42, 1047, 1412
Zsp2I	ATGCAT	1 cut(s)	654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.