Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0001866

Physical Location & Seq

Genomic Coordinates Forward (+)

2172093 .. 2177071

Gene Structure 4979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g02950.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGTGGGAAATTAATCCATACAAATTCCCGGCCGGGCTTATGATTCCGGCAAGAAACATGCCTTCGATGATCGGAAGCAATGGGAACATTAACGGGTTTGCATCATCTTCAGGACTCACACTTGGTCAGCCAAACATGATGGAAGCCGGTCATCTGCACCCGTTAGACATGGCTACAAACACCTCTGAAAGCGACATTGCTCGGTTCCGAGATGATGACTTCGACAGTGCTACCAAATCCGGCAGCGACAACCCTGAAGGCGGTTCCGGTGACGACCAAGAAAACCCTCGACCCAAAAAGAAGCGTTATCACCGCCACACACAGCATCAGATCCAAGAAATGGAAGCTTTTTTCAAGGAATGTCCCCACCCAGATGACAAGCAAAGGAAGGAACTGAGCCGGGAATTAGGTTTGGAACCATTACAAGTCAAATTTTGGTTTCAAAACAAGCGCACCCAAATGAAGACTCAGCATGAGCGGCATGAGAACACACAACTTCGGAACGAAAACGAAAAGCTCCGTGCTGATAACATGAGGTACAGAGAAGCGCTAGGTAATGCCTCATGCCCTAATTGTGGCGGCCCAACAGCTCTAGGAGAGATGTCGTTCGACGAACACCATCTGAGACTTGAGAATGCTCGATTACGAGAAGAGATCGATCGTATATCTGCGATAGCTGCGAAGTACGTTGGCAAACCGTTAGGAAACTACCCTCTCATGTCTTCTCCTGTTCCTTCCCGTGGTCCACTTGATCTTGGGGTTGGGAGCTTTGGTGGTCAGCCAGGCATGGGCGGTGAGATGTATGGTGCTGGAGACCTTCTCAGGTCAATCAGTGCACCAAGTGACGCAGACAAGCCAATGATAATTGAGCTTGCTGTTGCAGCTATGGAGGAACTCGTCAGAATGGCCCAAATGGGTGAACCCTTGTGGATGACCAGCCTTGATGGCAGCGCGACCGTACTTAATGAAGATGAGTACATAAGAACATTCCCTCGTGGAGTCGGGCCAAAACAAAATGGCTTCAAAACTGAAGCTTCGCGTGAGAGTGCAGTTGTTATCATGAACCACATTAACCTTGTTGAGATTCTCATGGATGTGAATCAGTGGTCGACTGTATTTTCTGGCATTGTGTCAAGAGCTTTGACCCTTGAAGTCCTATCAACTGGCGTGGCTGGAAATTACAATGGAGCCTTGCAAGTGATGACGGCAGAATTCCAGGTTCCTTCACCACTTGTTCCAACTCGTGAGAATTATTATGTGAGGTACTGCAAACAGCATGCTGATGGCACCTGGGCTGTAGTTGATGTTTCCTTGGACAACTTGCGCCCTAATCCTGCACCCAGATCTTGTCAAAGAATGCCCTCAGGATGCCTAATTCAAGAAATGCCAAATGGGTATTCAAAGGTTACATGGGTTGAGCATGCTGAAGTGGATGAAAGAGGTGTTCACAACCTCTACAAGCAGCTGGTTAGCTCCGGCCACGCATTTGGCGCTAAACGATGGGTTGCCACCTTGGACAGGCAATGCGAACGTCTGGCTAGTGCAATGGCATCAAACATCCCTACTGGTGATGTTGGAGTGATTACAAATCAAGAAGGGAGAAGAAGCATGCTAAAATTGGCTGAAAGAATGGTGATTAGCTTCTGTGCTGGAGTGAGTGCATCAACCACTCACACATGGACCACACTGTCTGGAACCGGGGCTGATGATGTCCGGGTGATGACCCGAAAGAGTGTGGATGATCCCGGAAGGCCTCCAGGTATTGTGCTCAGTGCCGCCACATCTTTCTGGCTGCCAGTGCCTCCCAAAAGAGTCTTTGAGTGTCTCCGCGATGAGAACTCTCGCAGCGAGTGGGATATTCTTTCCAATGGGGGAATTGTTCAAGAGATGGCACACATCGCTAATGGTCGTGACACTGGAAATTGCGTGTCTCTACTACGAGTAAATAGTGCTAATTCAAGCCAGAGCAACATGCTGATACTGCAAGAGAGTTCCTCTGACCCAACAGCTTCCTTTGTGATTTATGCACCAGTTGACATTGTTTCCATGAATGTGGTGCTGAATGGGAGTGACCCTGACTATGTTGCCCTTCTTCCTTCTGGGTTTGCTATACTCCCGGATGGAGCCGGCATTGGAGACTCTGGCTCTGGTGGTGGTTCCCTTCTCACTGTTGCTTTTCAGATCTTGGTTGATTCAGTCCCCACTGCTAAGCTGTCTCTCGGATCAGTTGCAACAGTTAACAATCTTATTGCTTGCACTGTTGCTTTTCAGAGCGATCAAAGCTGCATTGTCATGCGACAATGCGTGAACTTCATGACTCAGTTAATTTCTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

779

Amino Acids

84.95

Weight (kDa)

5.61

Isoelectric Point (pI)

42.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230 AT1G05230
fragaria_vesca	FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390 FvH4_6g43390
malus_domestica	MD09G1107300.v1.1 MD17G1095000.v1.1
prunus_persica	Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1 Prupe.3G218500_v2.0.a1
pyrus_communis	pycom09g02950 pycom17g09140
rosa_chinensis	RchiOBHm_Chr2g0159731
rosa_laevigata	RLG00000021177
rosa_multiflora	Rmu_sc0004966.1_g000003
rosa_roxburghii	Rroxscaffold_2G00090270 Rroxscaffold_2G00090370
rosa_rugosa	Rorug02G0478100 Rorug02G0478200 Rorug02G0478300
rosa_samantha	Rh2AG544900 Rh2BG557700 Rh2CG528000 Rh2DG567200
rosa_wichuraiana	Rw2G045060 Rw3G015270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1687
AccB1I	GGYRCC	1 cut(s)	1286
AccB7I	CCANNNNNTGG	1 cut(s)	340
AccBSI	CCGCTC	1 cut(s)	478
AccI	GTMKAC	1 cut(s)	1109
AccII	CGCG	3 cut(s)	953, 1039, 1830
AciI	CCGC	7 cut(s)	261, 313, 478, 579, 792, 1776, 1828
AclWI	GGATC	3 cut(s)	325, 1736, 2230
AcoI	YGGCCR	2 cut(s)	30, 1477
AcsI	RAATTY	3 cut(s)	23, 431, 1211
AcuI	CTGAAG	4 cut(s)	93, 276, 1050, 1446
AdeI	CACNNNGTG	1 cut(s)	842
AfaI	GTAC	5 cut(s)	539, 686, 960, 977, 1265
AfeI	AGCGCT	1 cut(s)	549
AfiI	CCNNNNNNNGG	6 cut(s)	260, 340, 575, 740, 788, 1518
AgsI	TTSAA	8 cut(s)	355, 443, 1024, 1151, 1379, 1401, 1883, 1959
AjnI	CCWGG	4 cut(s)	781, 1215, 1289, 1756
AjuI	GAANNNNNNNTTGG	2 cut(s)	1381, 1413
Alw21I	GWGCWC	2 cut(s)	838, 1770
Alw26I	GTCTC	6 cut(s)	619, 807, 1829, 1935, 2130, 2220
Alw44I	GTGCAC	1 cut(s)	834
AlwI	GGATC	3 cut(s)	325, 1736, 2230
Aor51HI	AGCGCT	1 cut(s)	549
AoxI	GGCC	6 cut(s)	30, 580, 906, 1004, 1477, 1751
ApaLI	GTGCAC	1 cut(s)	834
ApeKI	GCWGC	8 cut(s)	243, 677, 881, 948, 1462, 1792, 1845, 2283
ApoI	RAATTY	3 cut(s)	23, 431, 1211
AseI	ATTAAT	1 cut(s)	12
AspLEI	GCGC	5 cut(s)	453, 550, 953, 1326, 1493
AspS9I	GGNCC	5 cut(s)	581, 743, 907, 1004, 1680
AsuC2I	CCSGG	7 cut(s)	29, 34, 401, 1699, 1715, 1746, 2117
AsuHPI	GGTGA	8 cut(s)	281, 302, 806, 929, 1218, 1580, 1645, 1729
AvaII	GGWCC	2 cut(s)	743, 1680
AxyI	CCTNAGG	1 cut(s)	1363
BaeGI	GKGCMC	1 cut(s)	838
BanI	GGYRCC	1 cut(s)	1286
BauI	CACGAG	2 cut(s)	993, 1242
BbsI	GAAGAC	2 cut(s)	470, 714
Bbv12I	GWGCWC	2 cut(s)	838, 1770
BbvI	GCAGC	8 cut(s)	255, 664, 893, 960, 1474, 1779, 1857, 2270
BccI	CCATC	7 cut(s)	133, 627, 938, 1277, 1494, 1882, 2114
BceAI	ACGGC	1 cut(s)	1221
BciT130I	CCWGG	4 cut(s)	783, 1217, 1291, 1758
BcnI	CCSGG	7 cut(s)	29, 34, 401, 1699, 1715, 1746, 2117
BcoDI	GTCTC	6 cut(s)	619, 807, 1829, 1935, 2130, 2220
BfaI	CTAG	4 cut(s)	551, 593, 1539, 2331
BfmI	CTRYAG	1 cut(s)	1296
BfoI	RGCGCY	2 cut(s)	551, 1494
BglI	GCCNNNNNGGC	1 cut(s)	945
BglII	AGATCT	2 cut(s)	1343, 2181
BlpI	GCTNAGC	1 cut(s)	2208
Bme18I	GGWCC	2 cut(s)	743, 1680
BmgT120I	GGNCC	5 cut(s)	581, 743, 907, 1004, 1680
BmiI	GGNNCC	9 cut(s)	206, 265, 417, 1189, 1221, 1288, 1696, 2125, 2158
BmsI	GCATC	5 cut(s)	110, 334, 1358, 1559, 1670
BpiI	GAAGAC	2 cut(s)	470, 714
BplI	GAGNNNNNCTC	4 cut(s)	804, 836, 1979, 2011
BpmI	CTGGAG	3 cut(s)	831, 1671, 1740
Bpu1102I	GCTNAGC	1 cut(s)	2208
BpuEI	CTTGAG	1 cut(s)	650
BpuMI	CCSGG	7 cut(s)	29, 34, 401, 1699, 1715, 1746, 2117
Bsa29I	ATCGAT	1 cut(s)	657
BsaBI	GATNNNNATC	1 cut(s)	1098
BsaI	GGTCTC	1 cut(s)	807
BsaJI	CCNNGG	5 cut(s)	739, 1290, 1311, 1512, 1698
BsaWI	WCCGGW	1 cut(s)	266
BsaXI	ACNNNNNCTCC	2 cut(s)	757, 787
Bsc4I	CCNNNNNNNGG	6 cut(s)	260, 340, 575, 740, 788, 1518
Bse118I	RCCGGY	2 cut(s)	146, 2126
Bse1I	ACTGG	5 cut(s)	1168, 1570, 1796, 1921, 2030
Bse21I	CCTNAGG	1 cut(s)	1363
Bse3DI	GCAATG	4 cut(s)	85, 195, 1529, 1551
Bse8I	GATNNNNATC	1 cut(s)	1098
BseBI	CCWGG	4 cut(s)	783, 1217, 1291, 1758
BseCI	ATCGAT	1 cut(s)	657
BseDI	CCNNGG	5 cut(s)	739, 1290, 1311, 1512, 1698
BseGI	GGATG	7 cut(s)	936, 1099, 1373, 1438, 1557, 1744, 2125
BseJI	GATNNNNATC	1 cut(s)	1098
BseLI	CCNNNNNNNGG	6 cut(s)	260, 340, 575, 740, 788, 1518
BseMI	GCAATG	4 cut(s)	85, 195, 1529, 1551
BseMII	CTCAG	7 cut(s)	386, 482, 614, 835, 1377, 1783, 2333
BseNI	ACTGG	5 cut(s)	1168, 1570, 1796, 1921, 2030
BseSI	GKGCMC	1 cut(s)	838
BseX3I	CGGCCG	1 cut(s)	30
BseXI	GCAGC	8 cut(s)	255, 664, 893, 960, 1474, 1779, 1857, 2270
BsgI	GTGCAG	3 cut(s)	140, 1068, 1320
Bsh1236I	CGCG	3 cut(s)	953, 1039, 1830
Bsh1285I	CGRYCG	3 cut(s)	33, 661, 957
BshFI	GGCC	6 cut(s)	32, 582, 908, 1006, 1479, 1753
BshNI	GGYRCC	1 cut(s)	1286
BshVI	ATCGAT	1 cut(s)	657
BsiEI	CGRYCG	3 cut(s)	33, 661, 957
BsiHKAI	GWGCWC	2 cut(s)	838, 1770
BslFI	GGGAC	2 cut(s)	348, 2183
BslI	CCNNNNNNNGG	6 cut(s)	260, 340, 575, 740, 788, 1518
BsmAI	GTCTC	6 cut(s)	619, 807, 1829, 1935, 2130, 2220
BsmFI	GGGAC	2 cut(s)	348, 2183
BsmI	GAATGC	2 cut(s)	640, 1362
BsnI	GGCC	6 cut(s)	32, 582, 908, 1006, 1479, 1753
Bso31I	GGTCTC	1 cut(s)	807
Bsp1286I	GDGCHC	2 cut(s)	838, 1770
Bsp1720I	GCTNAGC	1 cut(s)	2208
BspACI	CCGC	7 cut(s)	261, 313, 478, 579, 792, 1776, 1828
BspANI	GGCC	6 cut(s)	32, 582, 908, 1006, 1479, 1753
BspCNI	CTCAG	7 cut(s)	387, 481, 615, 834, 1376, 1782, 2332
BspDI	ATCGAT	1 cut(s)	657
BspFNI	CGCG	3 cut(s)	953, 1039, 1830
BspHI	TCATGA	2 cut(s)	1059, 2313
BspLI	GGNNCC	9 cut(s)	206, 265, 417, 1189, 1221, 1288, 1696, 2125, 2158
BspPI	GGATC	3 cut(s)	325, 1736, 2230
BspT107I	GGYRCC	1 cut(s)	1286
BspTNI	GGTCTC	1 cut(s)	807
BsrBI	CCGCTC	1 cut(s)	478
BsrDI	GCAATG	4 cut(s)	85, 195, 1529, 1551
BsrFI	RCCGGY	2 cut(s)	146, 2126
BsrI	ACTGG	5 cut(s)	1168, 1570, 1796, 1921, 2030
BssAI	RCCGGY	2 cut(s)	146, 2126
BssECI	CCNNGG	5 cut(s)	739, 1290, 1311, 1512, 1698
BssSI	CACGAG	2 cut(s)	993, 1242
BssT1I	CCWWGG	2 cut(s)	1311, 1512
Bst2BI	CACGAG	2 cut(s)	993, 1242
Bst2UI	CCWGG	4 cut(s)	783, 1217, 1291, 1758
Bst4CI	ACNGT	8 cut(s)	227, 699, 958, 1114, 1689, 2170, 2236, 2260
Bst6I	CTCTTC	1 cut(s)	645
BstC8I	GCNNGC	6 cut(s)	873, 1278, 1422, 1610, 2128, 2254
BstDEI	CTNAG	8 cut(s)	395, 468, 623, 821, 1363, 1769, 2208, 2319
BstDSI	CCRYGG	1 cut(s)	739
BstENI	CCTNNNNNAGG	1 cut(s)	1516
BstF5I	GGATG	7 cut(s)	936, 1099, 1373, 1438, 1557, 1744, 2125
BstFNI	CGCG	3 cut(s)	953, 1039, 1830
BstH2I	RGCGCY	2 cut(s)	551, 1494
BstHHI	GCGC	5 cut(s)	453, 550, 953, 1326, 1493
BstMAI	GTCTC	6 cut(s)	619, 807, 1829, 1935, 2130, 2220
BstMCI	CGRYCG	3 cut(s)	33, 661, 957
BstMWI	GCNNNNNNNGC	9 cut(s)	478, 677, 881, 945, 1490, 1798, 1898, 1981, 2280
BstNI	CCWGG	4 cut(s)	783, 1217, 1291, 1758
BstNSI	RCATGY	5 cut(s)	61, 1280, 1424, 1612, 1975
BstSFI	CTRYAG	1 cut(s)	1296
BstSLI	GKGCMC	1 cut(s)	838
BstUI	CGCG	3 cut(s)	953, 1039, 1830
BstV1I	GCAGC	8 cut(s)	255, 664, 893, 960, 1474, 1779, 1857, 2270
BstV2I	GAAGAC	2 cut(s)	470, 714
BstX2I	RGATCY	3 cut(s)	330, 1343, 2181
BstXI	CCANNNNNNTGG	2 cut(s)	1487, 2053
BstYI	RGATCY	3 cut(s)	330, 1343, 2181
BstZI	CGGCCG	1 cut(s)	30
Bsu15I	ATCGAT	1 cut(s)	657
Bsu36I	CCTNAGG	1 cut(s)	1363
BsuRI	GGCC	6 cut(s)	32, 582, 908, 1006, 1479, 1753
BsuTUI	ATCGAT	1 cut(s)	657
BtgI	CCRYGG	1 cut(s)	739
BtgZI	GCGATG	2 cut(s)	1845, 1882
BtsCI	GGATG	7 cut(s)	936, 1099, 1373, 1438, 1557, 1744, 2125
BtsI	GCAGTG	1 cut(s)	2202
Cac8I	GCNNGC	6 cut(s)	873, 1278, 1422, 1610, 2128, 2254
CciI	TCATGA	2 cut(s)	1059, 2313
CfoI	GCGC	5 cut(s)	453, 550, 953, 1326, 1493
Cfr10I	RCCGGY	2 cut(s)	146, 2126
Cfr13I	GGNCC	5 cut(s)	581, 743, 907, 1004, 1680
ClaI	ATCGAT	1 cut(s)	657
CseI	GACGC	1 cut(s)	854
Csp6I	GTAC	5 cut(s)	538, 685, 959, 976, 1264
CspCI	CAANNNNNGTGG	2 cut(s)	1149, 1184
CviQI	GTAC	5 cut(s)	538, 685, 959, 976, 1264
DdeI	CTNAG	8 cut(s)	395, 468, 623, 821, 1363, 1769, 2208, 2319
DraIII	CACNNNGTG	1 cut(s)	842
DrdI	GACNNNNNNGTC	1 cut(s)	1687
DseDI	GACNNNNNNGTC	1 cut(s)	1687
EaeI	YGGCCR	2 cut(s)	30, 1477
EagI	CGGCCG	1 cut(s)	30
Eam1104I	CTCTTC	1 cut(s)	645
EarI	CTCTTC	1 cut(s)	645
EclXI	CGGCCG	1 cut(s)	30
Eco130I	CCWWGG	2 cut(s)	1311, 1512
Eco147I	AGGCCT	1 cut(s)	1753
Eco31I	GGTCTC	1 cut(s)	807
Eco47I	GGWCC	2 cut(s)	743, 1680
Eco47III	AGCGCT	1 cut(s)	549
Eco52I	CGGCCG	1 cut(s)	30
Eco57I	CTGAAG	4 cut(s)	93, 276, 1050, 1446
Eco81I	CCTNAGG	1 cut(s)	1363
EcoNI	CCTNNNNNAGG	1 cut(s)	1516
EcoRI	GAATTC	1 cut(s)	1211
EcoRII	CCWGG	4 cut(s)	781, 1215, 1289, 1756
EcoT14I	CCWWGG	2 cut(s)	1311, 1512
ErhI	CCWWGG	2 cut(s)	1311, 1512
FaqI	GGGAC	2 cut(s)	348, 2183
FblI	GTMKAC	1 cut(s)	1109
FokI	GGATG	7 cut(s)	943, 1106, 1380, 1445, 1544, 1751, 2132
FspBI	CTAG	4 cut(s)	551, 593, 1539, 2331
GlaI	GCGC	5 cut(s)	452, 549, 952, 1325, 1492
GsuI	CTGGAG	3 cut(s)	831, 1671, 1740
HaeII	RGCGCY	2 cut(s)	551, 1494
HaeIII	GGCC	6 cut(s)	32, 582, 908, 1006, 1479, 1753
HgaI	GACGC	1 cut(s)	854
HhaI	GCGC	5 cut(s)	453, 550, 953, 1326, 1493
Hin6I	GCGC	5 cut(s)	451, 548, 951, 1324, 1491
HinP1I	GCGC	5 cut(s)	451, 548, 951, 1324, 1491
HincII	GTYRAC	3 cut(s)	1110, 2035, 2239
HindII	GTYRAC	3 cut(s)	1110, 2035, 2239
HindIII	AAGCTT	2 cut(s)	345, 1032
HpaI	GTTAAC	1 cut(s)	2239
HphI	GGTGA	8 cut(s)	281, 302, 806, 929, 1218, 1580, 1645, 1729
Hpy166II	GTNNAC	8 cut(s)	746, 836, 920, 1110, 1447, 2035, 2239, 2308
Hpy8I	GTNNAC	8 cut(s)	746, 836, 920, 1110, 1447, 2035, 2239, 2308
Hpy99I	CGWCG	1 cut(s)	614
HpyCH4III	ACNGT	8 cut(s)	227, 699, 958, 1114, 1689, 2170, 2236, 2260
HpyCH4IV	ACGT	2 cut(s)	687, 1531
HpyF10VI	GCNNNNNNNGC	9 cut(s)	478, 677, 881, 945, 1490, 1798, 1898, 1981, 2280
HpyF3I	CTNAG	8 cut(s)	395, 468, 623, 821, 1363, 1769, 2208, 2319
HpySE526I	ACGT	2 cut(s)	687, 1531
HspAI	GCGC	5 cut(s)	451, 548, 951, 1324, 1491
KroI	GCCGGC	1 cut(s)	2126
KroNI	GCCGGC	1 cut(s)	2128
KspAI	GTTAAC	1 cut(s)	2239
LmnI	GCTCC	5 cut(s)	522, 765, 1187, 1478, 2123
Lsp1109I	GCAGC	8 cut(s)	255, 664, 893, 960, 1474, 1779, 1857, 2270
LweI	GCATC	5 cut(s)	110, 334, 1358, 1559, 1670
MaeI	CTAG	4 cut(s)	551, 593, 1539, 2331
MaeII	ACGT	2 cut(s)	687, 1531
MaeIII	GTNAC	5 cut(s)	269, 842, 1405, 1910, 2069
MbiI	CCGCTC	1 cut(s)	478
MboII	GAAGA	7 cut(s)	99, 475, 662, 714, 980, 1614, 2084
MflI	RGATCY	3 cut(s)	330, 1343, 2181
MhlI	GDGCHC	2 cut(s)	838, 1770
MlyI	GAGTC	6 cut(s)	108, 460, 1008, 1821, 2132, 2311
MmeI	TCCRAC	2 cut(s)	1262, 1555
MroNI	GCCGGC	1 cut(s)	2126
MseI	TTAA	6 cut(s)	12, 90, 963, 1071, 2238, 2324
MslI	CAYNNNNRTG	6 cut(s)	372, 458, 1094, 1281, 2051, 2291
MspA1I	CMGCKG	1 cut(s)	1465
Mva1269I	GAATGC	2 cut(s)	640, 1362
MvaI	CCWGG	4 cut(s)	783, 1217, 1291, 1758
MvnI	CGCG	3 cut(s)	953, 1039, 1830
MwoI	GCNNNNNNNGC	9 cut(s)	478, 677, 881, 945, 1490, 1798, 1898, 1981, 2280
NaeI	GCCGGC	1 cut(s)	2128
NciI	CCSGG	7 cut(s)	29, 34, 401, 1699, 1715, 1746, 2117
NgoMIV	GCCGGC	1 cut(s)	2126
NlaIV	GGNNCC	9 cut(s)	206, 265, 417, 1189, 1221, 1288, 1696, 2125, 2158
NmuCI	GTSAC	4 cut(s)	269, 842, 1910, 2069
NspI	RCATGY	5 cut(s)	61, 1280, 1424, 1612, 1975
PaeI	GCATGC	3 cut(s)	1280, 1424, 1612
PagI	TCATGA	2 cut(s)	1059, 2313
PceI	AGGCCT	1 cut(s)	1753
PctI	GAATGC	2 cut(s)	640, 1362
PdiI	GCCGGC	1 cut(s)	2128
PfeI	GAWTC	4 cut(s)	43, 1084, 1099, 2192
PflMI	CCANNNNNTGG	1 cut(s)	340
PfoI	TCCNGGA	2 cut(s)	1744, 2115
Ple19I	CGATCG	1 cut(s)	661
PleI	GAGTC	6 cut(s)	108, 460, 1007, 1820, 2132, 2311
PpsI	GAGTC	6 cut(s)	108, 460, 1007, 1820, 2132, 2311
PshBI	ATTAAT	1 cut(s)	12
Psp6I	CCWGG	4 cut(s)	781, 1215, 1289, 1756
PspGI	CCWGG	4 cut(s)	781, 1215, 1289, 1756
PspN4I	GGNNCC	9 cut(s)	206, 265, 417, 1189, 1221, 1288, 1696, 2125, 2158
PspPI	GGNCC	5 cut(s)	581, 743, 907, 1004, 1680
PsuI	RGATCY	3 cut(s)	330, 1343, 2181
PvuI	CGATCG	1 cut(s)	661
PvuII	CAGCTG	1 cut(s)	1465
RsaI	GTAC	5 cut(s)	539, 686, 960, 977, 1265
RsaNI	GTAC	5 cut(s)	538, 685, 959, 976, 1264
RseI	CAYNNNNRTG	6 cut(s)	372, 458, 1094, 1281, 2051, 2291
SalI	GTCGAC	1 cut(s)	1108
SaqAI	TTAA	6 cut(s)	12, 90, 963, 1071, 2238, 2324
Sau96I	GGNCC	5 cut(s)	581, 743, 907, 1004, 1680
SchI	GAGTC	6 cut(s)	108, 460, 1008, 1821, 2132, 2311
SduI	GDGCHC	2 cut(s)	838, 1770
SfaNI	GCATC	5 cut(s)	110, 334, 1358, 1559, 1670
SfcI	CTRYAG	1 cut(s)	1296
SinI	GGWCC	2 cut(s)	743, 1680
SmiMI	CAYNNNNRTG	6 cut(s)	372, 458, 1094, 1281, 2051, 2291
SmlI	CTYRAG	1 cut(s)	629
SmoI	CTYRAG	1 cut(s)	629
SphI	GCATGC	3 cut(s)	1280, 1424, 1612
SseBI	AGGCCT	1 cut(s)	1753
SsiI	CCGC	7 cut(s)	261, 313, 478, 579, 792, 1776, 1828
SspMI	CTAG	4 cut(s)	551, 593, 1539, 2331
StuI	AGGCCT	1 cut(s)	1753
StyI	CCWWGG	2 cut(s)	1311, 1512
TaaI	ACNGT	8 cut(s)	227, 699, 958, 1114, 1689, 2170, 2236, 2260
TaiI	ACGT	2 cut(s)	690, 1534
TaqI	TCGA	7 cut(s)	65, 222, 289, 609, 640, 657, 1109
TatI	WGTACW	1 cut(s)	975
TauI	GCSGC	3 cut(s)	481, 582, 1778
TfiI	GAWTC	4 cut(s)	43, 1084, 1099, 2192
Tru1I	TTAA	6 cut(s)	12, 90, 963, 1071, 2238, 2324
Tru9I	TTAA	6 cut(s)	12, 90, 963, 1071, 2238, 2324
TseFI	GTSAC	4 cut(s)	269, 842, 1910, 2069
TseI	GCWGC	8 cut(s)	243, 677, 881, 948, 1462, 1792, 1845, 2283
Tsp45I	GTSAC	4 cut(s)	269, 842, 1910, 2069
TspDTI	ATGAA	6 cut(s)	476, 981, 1076, 1449, 2063, 2302
TspGWI	ACGGA	1 cut(s)	509
Van91I	CCANNNNNTGG	1 cut(s)	340
VneI	GTGCAC	1 cut(s)	834
VpaK11BI	GGWCC	2 cut(s)	743, 1680
VspI	ATTAAT	1 cut(s)	12
XagI	CCTNNNNNAGG	1 cut(s)	1516
XapI	RAATTY	3 cut(s)	23, 431, 1211
XceI	RCATGY	5 cut(s)	61, 1280, 1424, 1612, 1975
XmiI	GTMKAC	1 cut(s)	1109
XspI	CTAG	4 cut(s)	551, 593, 1539, 2331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.