Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0006867

Physical Location & Seq

Genomic Coordinates Reverse (-)

20061694 .. 20069042

Gene Structure 7349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1208800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGCTCCACCTCCACCTGTATTTGCGATCCACCGCGCCATTTAATCACCTCAACCAGCAACTTTTGAGGTCACTCTTCTCCTCCTCCTCCTCCTACCCACCTTCTCTCAGACGCACCCACCCTTTGCTCTGCTGGTCACACTCTCCGCATTTCTCCTCATTGCAATCTGGTTCATATATGGAGGAGTCAAAGGTAGCTAATCAAGGGTCTGATACTCATGATACTATTGCTATTCGATCTAATCACAAGAGTTACAGTTACAACCAACTAATCTCATCTGCATCAAGGATATCCAGATTGTTATCTACCGGTGAATTTAATGCTGTGAGTTTTAGTTTTTACTTTTCCCTCGAATATTTATTATTTCCCCCTCCTCCTCCGCCCCATTCTTCCCCTTCGGAACAATATTTTAGCTTAATCTTTGGTGTCTTTGGTGTACAGACTCCTTCAGCATTGATTGATGGTGGGAAGGGACAAGGGCATCTTGGAGGGGCTAGAATAGGAATTGTGGCTAAGCCCTCGGCTGAGTTTGTCGCTGGTATACTTGGGACATGGCTTTGTGGAGGTGTTGCAGTTCCACTCGCTCTCAGCTATCCTGAAGCTGAGCTCTTGCATGTCATAAATGACTCAGACGTCTCAATGATACTGAGTACCGAAGATCATATGCAACTCATGGAAAATGTTGCTGCTAAATGTGCTGCCCAAACCTCTCTTATTCCACCAGTTCCCAGTAGTTCTTCACCAGAAAGTGCAGCTGGTAGTTTACAAGCAGGAGGACTAGATGCAGATGCAATTTTTCACCGGAATATAAAACAAACAAGATGCTGTCATTTTTATTGTCATGCTTTCATTTTTTGTTGCGCAGGTGAGGATCCTGCATTAGTCATATACACTAGTGGCACAACAGGAAAACCGAAAGGAGTTGTTCACACGCACAAAAGCATTGGTGCACAAGTCCAAACCTTGGCAGAAGCTTGGGGGTATACATCTGCCGATCAATTTTTGAATTGTTTACCTCTACATCATATCCTTCAGTTTTTGTGTATTTGCTTGCAAAATTGTATAGTTTTCAAATGCAGTCTTTGCTTACTTTTAGCTGATGTCTTCAATGTCTTCTGTTTCTGCTTTTCCATTGTCTTCTTGGGTGCGTGCATGTTTTTGTGCACGTGTCTTGCTGCGCTATTCATGATAGTTCTAGTTGTTCTGTTTGTATTGTTGAAGGTTGAGTTTATGCCAAAATTTAGCGTAAGGGAAATTTGGCAGAGGTGGCGGGAAGCATATCCAGTTAGTGGATCTAATGCAGATGATGGCATAACGGTCTTTACTGGAGTTCCAACCATGTATGCTCGATTGATACAAGCTCACAATGCAATGGATCAAGAGCTAAAAGTTGCCTCTGCCTATGCTGCAAAACAGTTGCGTCTAATGATGTGTGGTTCCTCTGCACTCCCTCTTCCTGTAATGCAAAAATGGGAAACCATCACAGGACATCGTCTTTTGGAACGTTATGGCATGACAGAGTTTGTCATGGCAATATCAAACCCCTTAAGAGGTGAGCGGAAAGCAGGCACGGTAGGAAAACCATTTCCGGGTGTGGAGGTAAAGATTGTTGCTGAAGATGAAAGTGGAAGTGATGCTACAGGTGTTGGTGAGCTGTGTGTCAAAAGTCCTTCATTATTCAAGGAATATTGGAAGCTTCCTGAGGTAACAAAGCAATCATTTACAAGTGATGGGTATTTCAGAACTGGAGATGCTGGTACAGTGGACGAAGATGGGTACTACATCATATTAGGACGTACCAGTGCTGATATCATGAAGGTTGGTGGATACAAGTTATCTGCGTTAGAAATTGAATCAGTTCTTTTACAGCACCCAGCTGTGGAGGAGTGTTGTGTGTTGGGCTTACCGGACAAAGACTATGGAGAAGCTGTTTGTGCAATAATTGTGCCAGAGGTGGAAACAAAGAGGAAGCAAAGGGAAGAACTGAAACCTGCTATAAGCTTGGAGGAACTATCCTTTTGGGCTAAAGACAAACTTGCACCATACAAGATACCAACGCAACTGATTCTGTGGGATTCACTACCTCGGAATGCTATGGGAAAGGTGAACAAGAAAGAGTTGAAAAAAACTCTGGCTTCTGACCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0009056 GO:0009058 GO:0009987 GO:0016020 GO:0016053 GO:0016054 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043649 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046395 GO:0071704 GO:0072330 GO:0090409 GO:0090410 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00280 map00280

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

716

Amino Acids

78.53

Weight (kDa)

6.43

Isoelectric Point (pI)

45.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	160 - 349	6.6e-34	AMP-binding enzyme
AMP-binding	PF00501	436 - 564	4.7e-27	AMP-binding enzyme
AMP-binding_C	PF13193	616 - 701	2e-17	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006867)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16170
fragaria_vesca	FvH4_6g31860 FvH4_6g31860 FvH4_6g31860
malus_domestica	MD09G1208800.v1.1 MD17G1190300.v1.1
prunus_persica	Prupe.3G065200_v2.0.a1 Prupe.3G065200_v2.0.a1
pyrus_communis	pycom09g12490 pycom17g19780
rosa_chinensis	RchiOBHm_Chr2g0139171 RchiOBHm_Chr2g0139181
rosa_laevigata	RLG00000019793
rosa_multiflora	Rmu_sc0001803.1_g000009 Rmu_sc0012067.1_g000001 Rmu_sc0037230.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105570
rosa_rugosa	Rorug02G0355400
rosa_samantha	Rh2AG405400 Rh2AG405500 Rh2BG415900 Rh2CG391500 Rh2CG391600 Rh2DG425200 Rh2DG425300
rosa_wichuraiana	Rw2G033120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	854
AasI	GACNNNNNNGTC	1 cut(s)	632
AatII	GACGTC	1 cut(s)	636
Acc16I	TGCGCA	1 cut(s)	862
Acc36I	ACCTGC	2 cut(s)	854, 1999
AccB7I	CCANNNNNTGG	2 cut(s)	964, 1289
AccBSI	CCGCTC	1 cut(s)	1558
AccI	GTMKAC	2 cut(s)	541, 983
AccII	CGCG	1 cut(s)	35
AciI	CCGC	5 cut(s)	33, 146, 380, 1270, 1558
AclI	AACGTT	1 cut(s)	1504
AclWI	GGATC	5 cut(s)	21, 866, 879, 1300, 1383
AcsI	RAATTY	3 cut(s)	314, 1238, 1254
AcuI	CTGAAG	4 cut(s)	432, 618, 1016, 1635
AcvI	CACGTG	1 cut(s)	1167
AcyI	GRCGYC	1 cut(s)	633
AfaI	GTAC	5 cut(s)	438, 652, 1759, 1778, 1798
AfiI	CCNNNNNNNGG	5 cut(s)	964, 1289, 1550, 1589, 1879
AflII	CTTAAG	1 cut(s)	1546
AflIII	ACRYGT	1 cut(s)	1166
AgeI	ACCGGT	1 cut(s)	308
AgsI	TTSAA	7 cut(s)	1006, 1072, 1108, 1219, 1681, 1853, 2122
AhlI	ACTAGT	1 cut(s)	893
Alw21I	GWGCWC	3 cut(s)	609, 952, 1166
Alw26I	GTCTC	1 cut(s)	640
Alw44I	GTGCAC	2 cut(s)	948, 1162
AlwI	GGATC	5 cut(s)	21, 866, 879, 1300, 1383
ApaLI	GTGCAC	2 cut(s)	948, 1162
ApeKI	GCWGC	5 cut(s)	686, 698, 752, 1175, 1406
ApoI	RAATTY	3 cut(s)	314, 1238, 1254
AsiGI	ACCGGT	1 cut(s)	308
Asp700I	GAANNNNTTC	1 cut(s)	1857
AspLEI	GCGC	3 cut(s)	37, 863, 1180
AsuC2I	CCSGG	1 cut(s)	1590
AsuHPI	GGTGA	8 cut(s)	38, 323, 732, 791, 878, 1565, 1661, 2116
AxyI	CCTNAGG	1 cut(s)	1701
BaeGI	GKGCMC	2 cut(s)	952, 1166
BamHI	GGATCC	1 cut(s)	871
BanII	GRGCYC	1 cut(s)	609
BarI	GAAGNNNNNNTAC	2 cut(s)	1621, 1653
BbrPI	CACGTG	1 cut(s)	1167
BbsI	GAAGAC	3 cut(s)	1096, 1105, 1129
Bbv12I	GWGCWC	3 cut(s)	609, 952, 1166
BbvI	GCAGC	5 cut(s)	673, 685, 764, 1162, 1393
BccI	CCATC	5 cut(s)	455, 1301, 1487, 1724, 1766
BciVI	GTATCC	1 cut(s)	1820
BcnI	CCSGG	1 cut(s)	1590
BcoDI	GTCTC	1 cut(s)	640
BcuI	ACTAGT	1 cut(s)	893
BfaI	CTAG	4 cut(s)	495, 779, 894, 1196
BfmI	CTRYAG	1 cut(s)	1638
BfrI	CTTAAG	1 cut(s)	1546
BfuAI	ACCTGC	2 cut(s)	854, 1999
BfuI	GTATCC	1 cut(s)	1820
BisI	GCNGC	5 cut(s)	687, 699, 753, 1176, 1407
BlpI	GCTNAGC	2 cut(s)	513, 603
BlsI	GCNGC	5 cut(s)	688, 700, 754, 1177, 1408
Bme1390I	CCNGG	1 cut(s)	1590
BmiI	GGNNCC	2 cut(s)	873, 1438
BmrFI	CCNGG	1 cut(s)	1590
BmrI	ACTGGG	1 cut(s)	723
BmsI	GCATC	7 cut(s)	290, 490, 772, 778, 812, 1624, 1741
BmuI	ACTGGG	1 cut(s)	723
BpiI	GAAGAC	3 cut(s)	1096, 1105, 1129
BpmI	CTGGAG	2 cut(s)	1347, 1767
Bpu1102I	GCTNAGC	2 cut(s)	513, 603
BpuMI	CCSGG	1 cut(s)	1590
BsaAI	YACGTR	1 cut(s)	1167
BsaBI	GATNNNNATC	1 cut(s)	301
BsaHI	GRCGYC	1 cut(s)	633
BsaJI	CCNNGG	3 cut(s)	519, 963, 2084
BsaWI	WCCGGW	3 cut(s)	308, 801, 1906
BsaXI	ACNNNNNCTCC	2 cut(s)	1914, 1944
Bsc4I	CCNNNNNNNGG	5 cut(s)	964, 1289, 1550, 1589, 1879
Bse118I	RCCGGY	1 cut(s)	308
Bse1I	ACTGG	6 cut(s)	722, 729, 1283, 1330, 1750, 1800
Bse21I	CCTNAGG	1 cut(s)	1701
Bse3DI	GCAATG	2 cut(s)	158, 1377
Bse8I	GATNNNNATC	1 cut(s)	301
BseDI	CCNNGG	3 cut(s)	519, 963, 2084
BseJI	GATNNNNATC	1 cut(s)	301
BseLI	CCNNNNNNNGG	5 cut(s)	964, 1289, 1550, 1589, 1879
BseMI	GCAATG	2 cut(s)	158, 1377
BseMII	CTCAG	7 cut(s)	121, 516, 594, 601, 638, 642, 1692
BseNI	ACTGG	6 cut(s)	722, 729, 1283, 1330, 1750, 1800
BseRI	GAGGAG	9 cut(s)	70, 73, 76, 79, 145, 197, 363, 366, 1898
BseSI	GKGCMC	2 cut(s)	952, 1166
BseXI	GCAGC	5 cut(s)	673, 685, 764, 1162, 1393
BseYI	CCCAGC	1 cut(s)	1873
BsgI	GTGCAG	2 cut(s)	771, 1428
Bsh1236I	CGCG	1 cut(s)	35
BshTI	ACCGGT	1 cut(s)	308
BsiHKAI	GWGCWC	3 cut(s)	609, 952, 1166
BsiSI	CCGG	4 cut(s)	309, 802, 1589, 1907
BslFI	GGGAC	2 cut(s)	486, 562
BslI	CCNNNNNNNGG	5 cut(s)	964, 1289, 1550, 1589, 1879
BsmAI	GTCTC	1 cut(s)	640
BsmBI	CGTCTC	1 cut(s)	640
BsmFI	GGGAC	2 cut(s)	486, 562
BsmI	GAATGC	1 cut(s)	2095
Bsp1286I	GDGCHC	3 cut(s)	609, 952, 1166
Bsp1407I	TGTACA	1 cut(s)	436
Bsp143I	GATC	7 cut(s)	26, 236, 658, 871, 994, 1292, 1375
Bsp1720I	GCTNAGC	2 cut(s)	513, 603
BspACI	CCGC	5 cut(s)	33, 146, 380, 1270, 1558
BspCNI	CTCAG	7 cut(s)	120, 517, 595, 600, 639, 641, 1693
BspFNI	CGCG	1 cut(s)	35
BspHI	TCATGA	3 cut(s)	217, 1185, 1812
BspLI	GGNNCC	2 cut(s)	873, 1438
BspMI	ACCTGC	2 cut(s)	854, 1999
BspPI	GGATC	5 cut(s)	21, 866, 879, 1300, 1383
BspTI	CTTAAG	1 cut(s)	1546
BsrBI	CCGCTC	1 cut(s)	1558
BsrDI	GCAATG	2 cut(s)	158, 1377
BsrFI	RCCGGY	1 cut(s)	308
BsrGI	TGTACA	1 cut(s)	436
BsrI	ACTGG	6 cut(s)	722, 729, 1283, 1330, 1750, 1800
BssAI	RCCGGY	1 cut(s)	308
BssECI	CCNNGG	3 cut(s)	519, 963, 2084
BssMI	GATC	7 cut(s)	26, 236, 658, 871, 994, 1292, 1375
BssNAI	GTATAC	2 cut(s)	542, 984
BssNI	GRCGYC	1 cut(s)	633
BssT1I	CCWWGG	1 cut(s)	963
Bst1107I	GTATAC	2 cut(s)	542, 984
Bst4CI	ACNGT	5 cut(s)	257, 1318, 1416, 1573, 1762
Bst6I	CTCTTC	2 cut(s)	80, 1458
BstACI	GRCGYC	1 cut(s)	633
BstAFI	CTTAAG	1 cut(s)	1546
BstAPI	GCANNNNNTGC	1 cut(s)	1083
BstAUI	TGTACA	1 cut(s)	436
BstBAI	YACGTR	1 cut(s)	1167
BstC8I	GCNNGC	3 cut(s)	1052, 1150, 1567
BstDEI	CTNAG	8 cut(s)	107, 513, 525, 587, 603, 628, 647, 1701
BstFNI	CGCG	1 cut(s)	35
BstHHI	GCGC	3 cut(s)	37, 863, 1180
BstKTI	GATC	7 cut(s)	29, 239, 661, 874, 997, 1295, 1378
BstMAI	GTCTC	1 cut(s)	640
BstMBI	GATC	7 cut(s)	26, 236, 658, 871, 994, 1292, 1375
BstMWI	GCNNNNNNNGC	6 cut(s)	695, 1083, 1267, 1367, 1406, 1934
BstNSI	RCATGY	2 cut(s)	617, 1156
BstSCI	CCNGG	1 cut(s)	1588
BstSFI	CTRYAG	1 cut(s)	1638
BstSLI	GKGCMC	2 cut(s)	952, 1166
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	5 cut(s)	673, 685, 764, 1162, 1393
BstV2I	GAAGAC	3 cut(s)	1096, 1105, 1129
BstX2I	RGATCY	2 cut(s)	871, 1292
BstYI	RGATCY	2 cut(s)	871, 1292
BstZ17I	GTATAC	2 cut(s)	542, 984
Bsu36I	CCTNAGG	1 cut(s)	1701
BsuI	GTATCC	1 cut(s)	1820
BtsIMutI	CAGTG	2 cut(s)	1767, 1807
BveI	ACCTGC	2 cut(s)	854, 1999
Cac8I	GCNNGC	3 cut(s)	1052, 1150, 1567
CciI	TCATGA	3 cut(s)	217, 1185, 1812
CfoI	GCGC	3 cut(s)	37, 863, 1180
Cfr10I	RCCGGY	1 cut(s)	308
CseI	GACGC	2 cut(s)	120, 1409
Csp6I	GTAC	5 cut(s)	437, 651, 1758, 1777, 1797
CspAI	ACCGGT	1 cut(s)	308
CviQI	GTAC	5 cut(s)	437, 651, 1758, 1777, 1797
DdeI	CTNAG	8 cut(s)	107, 513, 525, 587, 603, 628, 647, 1701
DpnI	GATC	7 cut(s)	28, 238, 660, 873, 996, 1294, 1377
DpnII	GATC	7 cut(s)	26, 236, 658, 871, 994, 1292, 1375
DrdI	GACNNNNNNGTC	1 cut(s)	632
DseDI	GACNNNNNNGTC	1 cut(s)	632
Eam1104I	CTCTTC	2 cut(s)	80, 1458
EarI	CTCTTC	2 cut(s)	80, 1458
EciI	GGCGGA	1 cut(s)	369
Ecl136II	GAGCTC	1 cut(s)	607
Eco130I	CCWWGG	1 cut(s)	963
Eco24I	GRGCYC	1 cut(s)	609
Eco32I	GATATC	2 cut(s)	291, 1810
Eco53kI	GAGCTC	1 cut(s)	607
Eco57I	CTGAAG	4 cut(s)	432, 618, 1016, 1635
Eco72I	CACGTG	1 cut(s)	1167
Eco81I	CCTNAGG	1 cut(s)	1701
EcoICRI	GAGCTC	1 cut(s)	607
EcoRV	GATATC	2 cut(s)	291, 1810
EcoT14I	CCWWGG	1 cut(s)	963
EcoT38I	GRGCYC	1 cut(s)	609
ErhI	CCWWGG	1 cut(s)	963
Esp3I	CGTCTC	1 cut(s)	640
FalI	AAGNNNNNCTT	4 cut(s)	468, 500, 2019, 2051
FaqI	GGGAC	2 cut(s)	486, 562
FauI	CCCGC	1 cut(s)	1263
FauNDI	CATATG	1 cut(s)	663
FblI	GTMKAC	2 cut(s)	541, 983
Fnu4HI	GCNGC	5 cut(s)	687, 699, 753, 1176, 1407
FriOI	GRGCYC	1 cut(s)	609
Fsp4HI	GCNGC	5 cut(s)	687, 699, 753, 1176, 1407
FspBI	CTAG	4 cut(s)	495, 779, 894, 1196
FspI	TGCGCA	1 cut(s)	862
GlaI	GCGC	3 cut(s)	36, 862, 1179
GluI	GCNGC	5 cut(s)	687, 699, 753, 1176, 1407
GsaI	CCCAGC	1 cut(s)	1877
GsuI	CTGGAG	2 cut(s)	1347, 1767
HapII	CCGG	4 cut(s)	309, 802, 1589, 1907
HgaI	GACGC	2 cut(s)	120, 1409
HhaI	GCGC	3 cut(s)	37, 863, 1180
Hin1I	GRCGYC	1 cut(s)	633
Hin6I	GCGC	3 cut(s)	35, 861, 1178
HinP1I	GCGC	3 cut(s)	35, 861, 1178
HindIII	AAGCTT	3 cut(s)	972, 1694, 1999
HinfI	GANTC	6 cut(s)	185, 442, 626, 1853, 2065, 2075
HpaII	CCGG	4 cut(s)	309, 802, 1589, 1907
HphI	GGTGA	8 cut(s)	38, 323, 732, 791, 878, 1565, 1661, 2116
Hpy188I	TCNGA	7 cut(s)	110, 211, 400, 631, 1742, 2088, 2140
Hpy188III	TCNNGA	7 cut(s)	218, 294, 596, 1186, 1379, 1700, 1813
HpyAV	CCTTC	8 cut(s)	111, 405, 456, 463, 1040, 1213, 1680, 1810
HpyCH4III	ACNGT	5 cut(s)	257, 1318, 1416, 1573, 1762
HpyCH4IV	ACGT	4 cut(s)	633, 1166, 1504, 1795
HpyF10VI	GCNNNNNNNGC	6 cut(s)	695, 1083, 1267, 1367, 1406, 1934
HpyF3I	CTNAG	8 cut(s)	107, 513, 525, 587, 603, 628, 647, 1701
HpySE526I	ACGT	4 cut(s)	633, 1166, 1504, 1795
Hsp92I	GRCGYC	1 cut(s)	633
HspAI	GCGC	3 cut(s)	35, 861, 1178
Kzo9I	GATC	7 cut(s)	26, 236, 658, 871, 994, 1292, 1375
LmnI	GCTCC	1 cut(s)	9
Lsp1109I	GCAGC	5 cut(s)	673, 685, 764, 1162, 1393
LweI	GCATC	7 cut(s)	290, 490, 772, 778, 812, 1624, 1741
MaeI	CTAG	4 cut(s)	495, 779, 894, 1196
MaeII	ACGT	4 cut(s)	633, 1166, 1504, 1795
MaeIII	GTNAC	5 cut(s)	69, 135, 251, 257, 1705
MalI	GATC	7 cut(s)	28, 238, 660, 873, 996, 1294, 1377
MbiI	CCGCTC	1 cut(s)	1558
MboI	GATC	7 cut(s)	26, 236, 658, 871, 994, 1292, 1375
MflI	RGATCY	2 cut(s)	871, 1292
MhlI	GDGCHC	3 cut(s)	609, 952, 1166
MlyI	GAGTC	3 cut(s)	194, 436, 620
MmeI	TCCRAC	1 cut(s)	1358
MroXI	GAANNNNTTC	1 cut(s)	1857
MseI	TTAA	4 cut(s)	42, 318, 416, 1547
MspA1I	CMGCKG	2 cut(s)	755, 1877
MspCI	CTTAAG	1 cut(s)	1546
MspI	CCGG	4 cut(s)	309, 802, 1589, 1907
MspR9I	CCNGG	1 cut(s)	1590
Mva1269I	GAATGC	1 cut(s)	2095
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	6 cut(s)	695, 1083, 1267, 1367, 1406, 1934
NciI	CCSGG	1 cut(s)	1590
NdeI	CATATG	1 cut(s)	663
NdeII	GATC	7 cut(s)	26, 236, 658, 871, 994, 1292, 1375
NlaIV	GGNNCC	2 cut(s)	873, 1438
NmeAIII	GCCGAG	1 cut(s)	500
NmuCI	GTSAC	2 cut(s)	69, 135
NsbI	TGCGCA	1 cut(s)	862
NspI	RCATGY	2 cut(s)	617, 1156
PagI	TCATGA	3 cut(s)	217, 1185, 1812
PaqCI	CACCTGC	1 cut(s)	854
PctI	GAATGC	1 cut(s)	2095
PdmI	GAANNNNTTC	1 cut(s)	1857
PfeI	GAWTC	3 cut(s)	1853, 2065, 2075
PflFI	GACNNNGTC	1 cut(s)	1491
PflMI	CCANNNNNTGG	2 cut(s)	964, 1289
PinAI	ACCGGT	1 cut(s)	308
PkrI	GCNGC	5 cut(s)	688, 700, 754, 1177, 1408
PleI	GAGTC	3 cut(s)	193, 436, 620
PmaCI	CACGTG	1 cut(s)	1167
PmlI	CACGTG	1 cut(s)	1167
PpsI	GAGTC	3 cut(s)	193, 436, 620
Ppu21I	YACGTR	1 cut(s)	1167
Psp124BI	GAGCTC	1 cut(s)	609
Psp1406I	AACGTT	1 cut(s)	1504
PspCI	CACGTG	1 cut(s)	1167
PspFI	CCCAGC	1 cut(s)	1873
PspN4I	GGNNCC	2 cut(s)	873, 1438
PsuI	RGATCY	2 cut(s)	871, 1292
PsyI	GACNNNGTC	1 cut(s)	1491
PvuII	CAGCTG	2 cut(s)	755, 1877
RsaI	GTAC	5 cut(s)	438, 652, 1759, 1778, 1798
RsaNI	GTAC	5 cut(s)	437, 651, 1758, 1777, 1797
SacI	GAGCTC	1 cut(s)	609
SaqAI	TTAA	4 cut(s)	42, 318, 416, 1547
SatI	GCNGC	5 cut(s)	687, 699, 753, 1176, 1407
Sau3AI	GATC	7 cut(s)	26, 236, 658, 871, 994, 1292, 1375
SchI	GAGTC	3 cut(s)	194, 436, 620
ScrFI	CCNGG	1 cut(s)	1590
SduI	GDGCHC	3 cut(s)	609, 952, 1166
SfaNI	GCATC	7 cut(s)	290, 490, 772, 778, 812, 1624, 1741
SfcI	CTRYAG	1 cut(s)	1638
SmlI	CTYRAG	1 cut(s)	1546
SmoI	CTYRAG	1 cut(s)	1546
SpeI	ACTAGT	1 cut(s)	893
SsiI	CCGC	5 cut(s)	33, 146, 380, 1270, 1558
SspI	AATATT	3 cut(s)	356, 407, 1688
SspMI	CTAG	4 cut(s)	495, 779, 894, 1196
SstI	GAGCTC	1 cut(s)	609
StyD4I	CCNGG	1 cut(s)	1588
StyI	CCWWGG	1 cut(s)	963
TaaI	ACNGT	5 cut(s)	257, 1318, 1416, 1573, 1762
TaiI	ACGT	4 cut(s)	636, 1169, 1507, 1798
TaqI	TCGA	3 cut(s)	235, 351, 1348
TatI	WGTACW	1 cut(s)	436
TfiI	GAWTC	3 cut(s)	1853, 2065, 2075
Tru1I	TTAA	4 cut(s)	42, 318, 416, 1547
Tru9I	TTAA	4 cut(s)	42, 318, 416, 1547
TscAI	CASTG	2 cut(s)	1767, 1807
TseFI	GTSAC	2 cut(s)	69, 135
TseI	GCWGC	5 cut(s)	686, 698, 752, 1175, 1406
Tsp45I	GTSAC	2 cut(s)	69, 135
TspDTI	ATGAA	6 cut(s)	162, 838, 1174, 1635, 1662, 1829
TspRI	CASTG	2 cut(s)	1767, 1807
Tth111I	GACNNNGTC	1 cut(s)	1491
Van91I	CCANNNNNTGG	2 cut(s)	964, 1289
Vha464I	CTTAAG	1 cut(s)	1546
VneI	GTGCAC	2 cut(s)	948, 1162
XapI	RAATTY	3 cut(s)	314, 1238, 1254
XceI	RCATGY	2 cut(s)	617, 1156
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1138
XmiI	GTMKAC	2 cut(s)	541, 983
XmnI	GAANNNNTTC	1 cut(s)	1857
XspI	CTAG	4 cut(s)	495, 779, 894, 1196
ZraI	GACGTC	1 cut(s)	634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.