Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006867

Physical Location & Seq

Genomic Coordinates Reverse (-)

28981902 .. 28988251

Gene Structure 6350 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00105570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGAGCTCCACCACCCCTCCTTTATTTAAAGCTTTCAACTACTACTGCAGGTCACTCTTCTCCTCTTCTTATTCATCTTGTTCGCGTTTCAAGGCCTCCCGCTATCTCACCAGGACCAACCCTTTGCTCTGCTTGTCACACTCTCGCCTTTTCTCTTTCTTGCAATCTGGTTCATCTATGGAGGTGGTAAAAGTAGCTACTCAAGGTTCTGTAACTCAGGATAGTGTTGCTGTTAGATCAGATAACAAGAGTTACAGTTACAATCAACTAATTTCTTCTGCACAGAGTATATCTGGCTTGTTATGTTGTGGCGACTTAAAGACTTCCAAAGCAAGTAGCCATCAATCTCCTTTAGCAACAACTGATGGTGCACGAGGACTTGGGCATCTTGGAGGAGCTAGAATAGGTATTGTGGCTAAGCCCTCCGCTGAATTCGTTGCTGGTATACTTGGGACTTGGCTTAGTGGAGGTGTTGCCGTTCCACTTGCTCTGAGCTACCCTGAGGCTGAGCTCTTGCATGTGATGAATGATTCAGACATCTCCATGATATTGAGTACTGAAGATCATCAACAACTTATGGAAAACCTTGCTGCTAAATGTGCTGCTCAGTTTTCTCTTATTCCACCAGTTCCCAGTAGTACTACTTCACATGCAAGTGCAGGTGGTCATTTACAAGCAGGAGAAGTAGATGCAGATAGAATTTTTCACAGGAATGGGAAGCAATCAAGTGAGGATCCAGCATTAATAATATACACTAGTGGTACAACGGGTAAACCTAAAGGAGTTGTTCACACTCACAAAAGCATCAGTGCGCAGGTCCAAACCTTGGCAGACGCTTGGGAGTATTCATGTGCTGATCAGTTTTTGCATTGTCTACCTCTACATCACGTCCATGGGCTTTTCAATGCTCTACTTGCCCCTCTGTATGCAGGTTCCACGGTTGAGTTTATGCCGAAGTTTAGTGTGAGGGGTATTTGGCAGAGATGGCGTGAAGCATATCCGAAAAATGGAACTAAGGCAGATGAGGGCATAACTGTCTTTACTGGAGTACCGACCATGTATACTCGATTGATACAAGCTCATGAAGCCATGGATGCGGAGCTAAAAGCTGCGTCTGCCTATGCTGCACAACAGTTGCGTCTTATGATGTGTGGTTCCTCTGCACTCCCTGTTCCTGTAATGCAGCAATGGGAAACTATCACAGGGCATCGTCTTCTGGAACGATACGGCATGACAGAGTTTGTGATGGCAATATCAAATCCCTTCAGAGGTGAACGGAAGGCAGGCACTGTTGGAAAACCATTTCCTGGTGTGGAGATAAAGATCGTTACAGAAGATGATAGTAAAAGTGATACGATGGTGGTGGGTGAGCTTTGCATTAGAAGCCCTTCATTGTTCAAGGAATATTGGAAACTTCCTGAGGTAACTAGGGAATCATTTACAAATGATGGGTTCTTCAAGACAGGGGATACTGGTACAGTGGATAAAGATGGCTACTACATCATATTGGGACGTACAAGTGCTGATATAATGAAGGTTGGTGGATACAAGTTATCAGCATTAGAAATTGAATCAATTCTTTTAGAGCACCCATCTGTAGAGGAGTGTTGTGTATTGGGCTTACCGGACAAAGATTATGGAGAAATTGTCTGTGCAATAGTAGTGCCAGATGTGGAAGCAAAGAGGAAACAAGAGGAAGAAAAGAGACCTGCCATAAGCTTGGAAGAGCTATGCTCTGGGGCTAAACACAAACTTGCACCATACAAGCTACCAACACGACTTTTTGTGTGGGATTCACTGCCTCGTAATGCTATGGGGAAGGTGAATAAGAAGGAGTTGAAGAAAGTTCTGGCTTCTGATCAACAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0009056 GO:0009058 GO:0009987 GO:0016020 GO:0016053 GO:0016054 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043649 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046395 GO:0071704 GO:0072330 GO:0090409 GO:0090410 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00280 map00280

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

623

Amino Acids

68.02

Weight (kDa)

7.25

Isoelectric Point (pI)

38.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	126 - 470	2.5e-73	AMP-binding enzyme
AMP-binding_C	PF13193	522 - 607	1e-16	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006867)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16170
fragaria_vesca	FvH4_6g31860 FvH4_6g31860 FvH4_6g31860
malus_domestica	MD09G1208800.v1.1 MD17G1190300.v1.1
prunus_persica	Prupe.3G065200_v2.0.a1 Prupe.3G065200_v2.0.a1
pyrus_communis	pycom09g12490 pycom17g19780
rosa_chinensis	RchiOBHm_Chr2g0139171 RchiOBHm_Chr2g0139181
rosa_laevigata	RLG00000019793
rosa_multiflora	Rmu_sc0001803.1_g000009 Rmu_sc0012067.1_g000001 Rmu_sc0037230.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105570
rosa_rugosa	Rorug02G0355400
rosa_samantha	Rh2AG405400 Rh2AG405500 Rh2BG415900 Rh2CG391500 Rh2CG391600 Rh2DG425200 Rh2DG425300
rosa_wichuraiana	Rw2G033120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	650
Acc16I	TGCGCA	1 cut(s)	813
Acc36I	ACCTGC	5 cut(s)	39, 650, 805, 920, 1717
AccB7I	CCANNNNNTGG	2 cut(s)	826, 1307
AccI	GTMKAC	3 cut(s)	445, 874, 1061
AccII	CGCG	1 cut(s)	85
AciI	CCGC	3 cut(s)	100, 426, 1097
AclWI	GGATC	2 cut(s)	728, 741
AcsI	RAATTY	2 cut(s)	431, 699
AcuI	CTGAAG	2 cut(s)	579, 1249
AfaI	GTAC	6 cut(s)	556, 640, 763, 1050, 1477, 1516
AfiI	CCNNNNNNNGG	4 cut(s)	826, 1007, 1268, 1307
AgsI	TTSAA	7 cut(s)	37, 91, 904, 1399, 1459, 1571, 1840
AhlI	ACTAGT	1 cut(s)	755
AjiI	CACGTC	1 cut(s)	889
AjnI	CCWGG	2 cut(s)	110, 1306
Alw21I	GWGCWC	4 cut(s)	8, 373, 513, 1590
Alw26I	GTCTC	1 cut(s)	1699
Alw44I	GTGCAC	1 cut(s)	369
AlwI	GGATC	2 cut(s)	728, 741
AlwNI	CAGNNNCTG	1 cut(s)	1289
AoxI	GGCC	1 cut(s)	93
ApaLI	GTGCAC	1 cut(s)	369
ApeKI	GCWGC	5 cut(s)	590, 602, 1109, 1124, 1183
ApoI	RAATTY	2 cut(s)	431, 699
ArsI	GACNNNNNNTTYG	2 cut(s)	106, 138
AseI	ATTAAT	1 cut(s)	743
Asp700I	GAANNNNTTC	2 cut(s)	1387, 1575
AspLEI	GCGC	1 cut(s)	814
AspS9I	GGNCC	2 cut(s)	114, 817
AsuHPI	GGTGA	4 cut(s)	100, 1283, 1379, 1834
AvaII	GGWCC	2 cut(s)	114, 817
AxyI	CCTNAGG	2 cut(s)	501, 1419
BaeGI	GKGCMC	1 cut(s)	373
BaeI	ACNNNNGTAYC	4 cut(s)	1032, 1065, 1344, 1377
BamHI	GGATCC	1 cut(s)	733
BanII	GRGCYC	2 cut(s)	8, 513
BarI	GAAGNNNNNNTAC	2 cut(s)	628, 660
BauI	CACGAG	1 cut(s)	372
BbsI	GAAGAC	1 cut(s)	1205
Bbv12I	GWGCWC	4 cut(s)	8, 373, 513, 1590
BbvI	GCAGC	5 cut(s)	577, 589, 1096, 1111, 1195
BccI	CCATC	8 cut(s)	348, 359, 978, 1240, 1351, 1442, 1484, 1600
BceAI	ACGGC	2 cut(s)	461, 1243
BciT130I	CCWGG	2 cut(s)	112, 1308
BciVI	GTATCC	2 cut(s)	1462, 1538
BclI	TGATCA	2 cut(s)	856, 1858
BcoDI	GTCTC	1 cut(s)	1699
BcuI	ACTAGT	1 cut(s)	755
BfaI	CTAG	3 cut(s)	399, 756, 1428
BfmI	CTRYAG	2 cut(s)	46, 1596
BfuAI	ACCTGC	5 cut(s)	39, 650, 805, 920, 1717
BfuI	GTATCC	2 cut(s)	1462, 1538
BisI	GCNGC	5 cut(s)	591, 603, 1110, 1125, 1184
BlpI	GCTNAGC	2 cut(s)	417, 507
BlsI	GCNGC	5 cut(s)	592, 604, 1111, 1126, 1185
BmcAI	AGTACT	2 cut(s)	556, 640
Bme1390I	CCNGG	2 cut(s)	112, 1308
Bme18I	GGWCC	2 cut(s)	114, 817
BmgBI	CACGTC	1 cut(s)	889
BmgT120I	GGNCC	2 cut(s)	114, 817
BmiI	GGNNCC	3 cut(s)	735, 934, 1156
BmrFI	CCNGG	2 cut(s)	112, 1308
BmrI	ACTGGG	1 cut(s)	627
BmsI	GCATC	5 cut(s)	394, 679, 813, 1084, 1216
BmuI	ACTGGG	1 cut(s)	627
BpiI	GAAGAC	1 cut(s)	1205
BplI	GAGNNNNNCTC	2 cut(s)	1718, 1750
BpmI	CTGGAG	1 cut(s)	1065
Bpu1102I	GCTNAGC	2 cut(s)	417, 507
BpuEI	CTTGAG	1 cut(s)	186
BsaBI	GATNNNNATC	1 cut(s)	1322
BsaI	GGTCTC	1 cut(s)	1699
BsaJI	CCNNGG	4 cut(s)	825, 892, 936, 1089
BsaWI	WCCGGW	1 cut(s)	1624
BsaXI	ACNNNNNCTCC	3 cut(s)	31, 1632, 1662
Bsc4I	CCNNNNNNNGG	4 cut(s)	826, 1007, 1268, 1307
Bse1I	ACTGG	4 cut(s)	626, 633, 1048, 1477
Bse21I	CCTNAGG	2 cut(s)	501, 1419
Bse3DI	GCAATG	1 cut(s)	1193
Bse8I	GATNNNNATC	1 cut(s)	1322
BseBI	CCWGG	2 cut(s)	112, 1308
BseDI	CCNNGG	4 cut(s)	825, 892, 936, 1089
BseGI	GGATG	1 cut(s)	1099
BseJI	GATNNNNATC	1 cut(s)	1322
BseLI	CCNNNNNNNGG	4 cut(s)	826, 1007, 1268, 1307
BseMI	GCAATG	1 cut(s)	1193
BseMII	CTCAG	6 cut(s)	230, 482, 492, 498, 620, 1410
BseNI	ACTGG	4 cut(s)	626, 633, 1048, 1477
BseRI	GAGGAG	3 cut(s)	52, 408, 1616
BseSI	GKGCMC	1 cut(s)	373
BseXI	GCAGC	5 cut(s)	577, 589, 1096, 1111, 1195
BsgI	GTGCAG	4 cut(s)	264, 678, 1110, 1146
Bsh1236I	CGCG	1 cut(s)	85
BshFI	GGCC	1 cut(s)	95
BsiHKAI	GWGCWC	4 cut(s)	8, 373, 513, 1590
BsiSI	CCGG	1 cut(s)	1625
BslFI	GGGAC	2 cut(s)	466, 1524
BslI	CCNNNNNNNGG	4 cut(s)	826, 1007, 1268, 1307
BsmAI	GTCTC	1 cut(s)	1699
BsmFI	GGGAC	2 cut(s)	466, 1524
BsnI	GGCC	1 cut(s)	95
Bso31I	GGTCTC	1 cut(s)	1699
Bsp1286I	GDGCHC	4 cut(s)	8, 373, 513, 1590
Bsp143I	GATC	6 cut(s)	236, 562, 733, 856, 1323, 1858
Bsp1720I	GCTNAGC	2 cut(s)	417, 507
Bsp19I	CCATGG	2 cut(s)	892, 1089
BspACI	CCGC	3 cut(s)	100, 426, 1097
BspANI	GGCC	1 cut(s)	95
BspCNI	CTCAG	6 cut(s)	229, 483, 493, 499, 619, 1411
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	1 cut(s)	1081
BspLI	GGNNCC	3 cut(s)	735, 934, 1156
BspMAI	CTGCAG	1 cut(s)	50
BspMI	ACCTGC	5 cut(s)	39, 650, 805, 920, 1717
BspPI	GGATC	2 cut(s)	728, 741
BspQI	GCTCTTC	1 cut(s)	1719
BspTNI	GGTCTC	1 cut(s)	1699
BsrDI	GCAATG	1 cut(s)	1193
BsrI	ACTGG	4 cut(s)	626, 633, 1048, 1477
BssECI	CCNNGG	4 cut(s)	825, 892, 936, 1089
BssMI	GATC	6 cut(s)	236, 562, 733, 856, 1323, 1858
BssNAI	GTATAC	2 cut(s)	446, 1062
BssSI	CACGAG	1 cut(s)	372
BssT1I	CCWWGG	3 cut(s)	825, 892, 1089
Bst1107I	GTATAC	2 cut(s)	446, 1062
Bst2BI	CACGAG	1 cut(s)	372
Bst2UI	CCWGG	2 cut(s)	112, 1308
Bst4CI	ACNGT	6 cut(s)	257, 940, 1036, 1134, 1291, 1480
Bst6I	CTCTTC	3 cut(s)	62, 70, 1719
BstC8I	GCNNGC	1 cut(s)	1285
BstDEI	CTNAG	9 cut(s)	216, 417, 461, 491, 501, 507, 606, 1014, 1419
BstDSI	CCRYGG	3 cut(s)	892, 936, 1089
BstF5I	GGATG	1 cut(s)	1099
BstFNI	CGCG	1 cut(s)	85
BstHHI	GCGC	1 cut(s)	814
BstKTI	GATC	6 cut(s)	239, 565, 736, 859, 1326, 1861
BstMAI	GTCTC	1 cut(s)	1699
BstMBI	GATC	6 cut(s)	236, 562, 733, 856, 1323, 1858
BstMWI	GCNNNNNNNGC	8 cut(s)	599, 914, 985, 1085, 1094, 1115, 1124, 1383
BstNI	CCWGG	2 cut(s)	112, 1308
BstNSI	RCATGY	2 cut(s)	521, 653
BstSCI	CCNGG	2 cut(s)	110, 1306
BstSFI	CTRYAG	2 cut(s)	46, 1596
BstSLI	GKGCMC	1 cut(s)	373
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	5 cut(s)	577, 589, 1096, 1111, 1195
BstV2I	GAAGAC	1 cut(s)	1205
BstX2I	RGATCY	1 cut(s)	733
BstXI	CCANNNNNNTGG	1 cut(s)	1720
BstYI	RGATCY	1 cut(s)	733
BstZ17I	GTATAC	2 cut(s)	446, 1062
Bsu36I	CCTNAGG	2 cut(s)	501, 1419
BsuI	GTATCC	2 cut(s)	1462, 1538
BsuRI	GGCC	1 cut(s)	95
BtgI	CCRYGG	3 cut(s)	892, 936, 1089
BtrI	CACGTC	1 cut(s)	889
BtsCI	GGATG	1 cut(s)	1099
BtsI	GCAGTG	1 cut(s)	1796
BtsIMutI	CAGTG	4 cut(s)	814, 1287, 1485, 1796
BveI	ACCTGC	5 cut(s)	39, 650, 805, 920, 1717
Cac8I	GCNNGC	1 cut(s)	1285
CaiI	CAGNNNCTG	1 cut(s)	1289
CciI	TCATGA	1 cut(s)	1081
CfoI	GCGC	1 cut(s)	814
Cfr13I	GGNCC	2 cut(s)	114, 817
CseI	GACGC	3 cut(s)	842, 1101, 1127
Csp6I	GTAC	6 cut(s)	555, 639, 762, 1049, 1476, 1515
CviAII	CATG	9 cut(s)	518, 544, 650, 849, 893, 1057, 1082, 1090, 1231
CviQI	GTAC	6 cut(s)	555, 639, 762, 1049, 1476, 1515
DdeI	CTNAG	9 cut(s)	216, 417, 461, 491, 501, 507, 606, 1014, 1419
DpnI	GATC	6 cut(s)	238, 564, 735, 858, 1325, 1860
DpnII	GATC	6 cut(s)	236, 562, 733, 856, 1323, 1858
DraI	TTTAAA	1 cut(s)	28
Eam1104I	CTCTTC	3 cut(s)	62, 70, 1719
EarI	CTCTTC	3 cut(s)	62, 70, 1719
Ecl136II	GAGCTC	2 cut(s)	6, 511
Eco130I	CCWWGG	3 cut(s)	825, 892, 1089
Eco147I	AGGCCT	1 cut(s)	95
Eco24I	GRGCYC	2 cut(s)	8, 513
Eco31I	GGTCTC	1 cut(s)	1699
Eco47I	GGWCC	2 cut(s)	114, 817
Eco53kI	GAGCTC	2 cut(s)	6, 511
Eco57I	CTGAAG	2 cut(s)	579, 1249
Eco81I	CCTNAGG	2 cut(s)	501, 1419
EcoICRI	GAGCTC	2 cut(s)	6, 511
EcoRI	GAATTC	1 cut(s)	431
EcoRII	CCWGG	2 cut(s)	110, 1306
EcoT14I	CCWWGG	3 cut(s)	825, 892, 1089
EcoT38I	GRGCYC	2 cut(s)	8, 513
ErhI	CCWWGG	3 cut(s)	825, 892, 1089
FaeI	CATG	9 cut(s)	521, 547, 653, 852, 896, 1060, 1085, 1093, 1234
FaqI	GGGAC	2 cut(s)	466, 1524
FatI	CATG	9 cut(s)	517, 543, 649, 848, 892, 1056, 1081, 1089, 1230
FauI	CCCGC	1 cut(s)	107
FbaI	TGATCA	2 cut(s)	856, 1858
FblI	GTMKAC	3 cut(s)	445, 874, 1061
Fnu4HI	GCNGC	5 cut(s)	591, 603, 1110, 1125, 1184
FokI	GGATG	1 cut(s)	1106
FriOI	GRGCYC	2 cut(s)	8, 513
Fsp4HI	GCNGC	5 cut(s)	591, 603, 1110, 1125, 1184
FspBI	CTAG	3 cut(s)	399, 756, 1428
FspI	TGCGCA	1 cut(s)	813
GlaI	GCGC	1 cut(s)	813
GluI	GCNGC	5 cut(s)	591, 603, 1110, 1125, 1184
GsuI	CTGGAG	1 cut(s)	1065
HaeIII	GGCC	1 cut(s)	95
HapII	CCGG	1 cut(s)	1625
HgaI	GACGC	3 cut(s)	842, 1101, 1127
HhaI	GCGC	1 cut(s)	814
Hin1II	CATG	9 cut(s)	521, 547, 653, 852, 896, 1060, 1085, 1093, 1234
Hin6I	GCGC	1 cut(s)	812
HinP1I	GCGC	1 cut(s)	812
HindIII	AAGCTT	2 cut(s)	30, 1717
HinfI	GANTC	4 cut(s)	530, 1433, 1571, 1793
HpaII	CCGG	1 cut(s)	1625
HphI	GGTGA	4 cut(s)	100, 1283, 1379, 1834
Hpy166II	GTNNAC	7 cut(s)	371, 446, 773, 790, 875, 1062, 1274
Hpy188I	TCNGA	6 cut(s)	241, 492, 535, 1002, 1268, 1858
Hpy188III	TCNNGA	5 cut(s)	218, 1082, 1217, 1418, 1459
Hpy8I	GTNNAC	7 cut(s)	371, 446, 773, 790, 875, 1062, 1274
HpyAV	CCTTC	6 cut(s)	1273, 1273, 1398, 1528, 1813, 1825
HpyCH4III	ACNGT	6 cut(s)	257, 940, 1036, 1134, 1291, 1480
HpyCH4IV	ACGT	2 cut(s)	888, 1513
HpyF10VI	GCNNNNNNNGC	8 cut(s)	599, 914, 985, 1085, 1094, 1115, 1124, 1383
HpyF3I	CTNAG	9 cut(s)	216, 417, 461, 491, 501, 507, 606, 1014, 1419
HpySE526I	ACGT	2 cut(s)	888, 1513
Hsp92II	CATG	9 cut(s)	521, 547, 653, 852, 896, 1060, 1085, 1093, 1234
HspAI	GCGC	1 cut(s)	812
Ksp22I	TGATCA	2 cut(s)	856, 1858
Kzo9I	GATC	6 cut(s)	236, 562, 733, 856, 1323, 1858
LguI	GCTCTTC	1 cut(s)	1719
LmnI	GCTCC	3 cut(s)	11, 395, 1099
Lsp1109I	GCAGC	5 cut(s)	577, 589, 1096, 1111, 1195
LweI	GCATC	5 cut(s)	394, 679, 813, 1084, 1216
MaeI	CTAG	3 cut(s)	399, 756, 1428
MaeII	ACGT	2 cut(s)	888, 1513
MaeIII	GTNAC	7 cut(s)	51, 135, 211, 251, 257, 1327, 1423
MalI	GATC	6 cut(s)	238, 564, 735, 858, 1325, 1860
MboI	GATC	6 cut(s)	236, 562, 733, 856, 1323, 1858
MflI	RGATCY	1 cut(s)	733
MhlI	GDGCHC	4 cut(s)	8, 373, 513, 1590
MluCI	AATT	6 cut(s)	270, 431, 699, 1566, 1575, 1644
MmeI	TCCRAC	1 cut(s)	1273
MroXI	GAANNNNTTC	2 cut(s)	1387, 1575
MseI	TTAA	3 cut(s)	27, 317, 743
MslI	CAYNNNNRTG	4 cut(s)	542, 654, 711, 891
MspA1I	CMGCKG	1 cut(s)	428
MspI	CCGG	1 cut(s)	1625
MspR9I	CCNGG	2 cut(s)	112, 1308
MvaI	CCWGG	2 cut(s)	112, 1308
MvnI	CGCG	1 cut(s)	85
MwoI	GCNNNNNNNGC	8 cut(s)	599, 914, 985, 1085, 1094, 1115, 1124, 1383
NcoI	CCATGG	2 cut(s)	892, 1089
NdeII	GATC	6 cut(s)	236, 562, 733, 856, 1323, 1858
NlaIII	CATG	9 cut(s)	521, 547, 653, 852, 896, 1060, 1085, 1093, 1234
NlaIV	GGNNCC	3 cut(s)	735, 934, 1156
NmuCI	GTSAC	2 cut(s)	51, 135
NsbI	TGCGCA	1 cut(s)	813
NspI	RCATGY	2 cut(s)	521, 653
PagI	TCATGA	1 cut(s)	1081
PaqCI	CACCTGC	1 cut(s)	650
PceI	AGGCCT	1 cut(s)	95
PciSI	GCTCTTC	1 cut(s)	1719
PdmI	GAANNNNTTC	2 cut(s)	1387, 1575
PfeI	GAWTC	4 cut(s)	530, 1433, 1571, 1793
PflMI	CCANNNNNTGG	2 cut(s)	826, 1307
PkrI	GCNGC	5 cut(s)	592, 604, 1111, 1126, 1185
PshBI	ATTAAT	1 cut(s)	743
Psp124BI	GAGCTC	2 cut(s)	8, 513
Psp6I	CCWGG	2 cut(s)	110, 1306
PspGI	CCWGG	2 cut(s)	110, 1306
PspN4I	GGNNCC	3 cut(s)	735, 934, 1156
PspPI	GGNCC	2 cut(s)	114, 817
PstI	CTGCAG	1 cut(s)	50
PstNI	CAGNNNCTG	1 cut(s)	1289
PsuI	RGATCY	1 cut(s)	733
RsaI	GTAC	6 cut(s)	556, 640, 763, 1050, 1477, 1516
RsaNI	GTAC	6 cut(s)	555, 639, 762, 1049, 1476, 1515
RseI	CAYNNNNRTG	4 cut(s)	542, 654, 711, 891
SacI	GAGCTC	2 cut(s)	8, 513
SapI	GCTCTTC	1 cut(s)	1719
SaqAI	TTAA	3 cut(s)	27, 317, 743
SatI	GCNGC	5 cut(s)	591, 603, 1110, 1125, 1184
Sau3AI	GATC	6 cut(s)	236, 562, 733, 856, 1323, 1858
Sau96I	GGNCC	2 cut(s)	114, 817
ScaI	AGTACT	2 cut(s)	556, 640
ScrFI	CCNGG	2 cut(s)	112, 1308
SduI	GDGCHC	4 cut(s)	8, 373, 513, 1590
SfaNI	GCATC	5 cut(s)	394, 679, 813, 1084, 1216
SfcI	CTRYAG	2 cut(s)	46, 1596
SinI	GGWCC	2 cut(s)	114, 817
SmiMI	CAYNNNNRTG	4 cut(s)	542, 654, 711, 891
SmlI	CTYRAG	1 cut(s)	201
SmoI	CTYRAG	1 cut(s)	201
SpeI	ACTAGT	1 cut(s)	755
Sse9I	AATT	6 cut(s)	270, 431, 699, 1566, 1575, 1644
SseBI	AGGCCT	1 cut(s)	95
SsiI	CCGC	3 cut(s)	100, 426, 1097
SspI	AATATT	1 cut(s)	1406
SspMI	CTAG	3 cut(s)	399, 756, 1428
SstI	GAGCTC	2 cut(s)	8, 513
StuI	AGGCCT	1 cut(s)	95
StyD4I	CCNGG	2 cut(s)	110, 1306
StyI	CCWWGG	3 cut(s)	825, 892, 1089
TaaI	ACNGT	6 cut(s)	257, 940, 1036, 1134, 1291, 1480
TaiI	ACGT	2 cut(s)	891, 1516
TaqI	TCGA	1 cut(s)	1066
TasI	AATT	6 cut(s)	270, 431, 699, 1566, 1575, 1644
TatI	WGTACW	2 cut(s)	554, 638
TfiI	GAWTC	4 cut(s)	530, 1433, 1571, 1793
Tru1I	TTAA	3 cut(s)	27, 317, 743
Tru9I	TTAA	3 cut(s)	27, 317, 743
TscAI	CASTG	4 cut(s)	814, 1294, 1485, 1803
TseFI	GTSAC	2 cut(s)	51, 135
TseI	GCWGC	5 cut(s)	590, 602, 1109, 1124, 1183
Tsp45I	GTSAC	2 cut(s)	51, 135
TspDTI	ATGAA	7 cut(s)	63, 162, 539, 837, 1098, 1380, 1547
TspGWI	ACGGA	1 cut(s)	1291
TspRI	CASTG	4 cut(s)	814, 1294, 1485, 1803
Van91I	CCANNNNNTGG	2 cut(s)	826, 1307
VneI	GTGCAC	1 cut(s)	369
VpaK11BI	GGWCC	2 cut(s)	114, 817
VspI	ATTAAT	1 cut(s)	743
XapI	RAATTY	2 cut(s)	431, 699
XceI	RCATGY	2 cut(s)	521, 653
XmiI	GTMKAC	3 cut(s)	445, 874, 1061
XmnI	GAANNNNTTC	2 cut(s)	1387, 1575
XspI	CTAG	3 cut(s)	399, 756, 1428
ZrmI	AGTACT	2 cut(s)	556, 640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.