Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0005853

Physical Location & Seq

Genomic Coordinates Forward (+)

29399465 .. 29401426

Gene Structure 1962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1233900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGCTGGATTGTTTGAGAATTGTCAAGACATGGGCTAAGAAAGTTAGCAAGGCAAAGGGCTTCAATGAGCAACTGGTGGATGAAGCAAATGCTTTGCTCTTCACCTTTGGATCGTATCGGCTAGGGGTTCATGGCCCCGGAGCAGACATAGACACACTCTGTGTCGATCCTAAATATGCAACTCGTCAAGAAGATTTCTTCGGCGAGCTACACATGATGCTATCTGAGATGCCTCAAGTGACAGAGTTGAACCCTGTGCCCGGTGCTCACATCCCAGTCATGAAATTCAAGTTCAGTGGCGGTGTGGATAAACAGATGGTTCGTAGTCTTAATGGTTGCAGAGTTACAGACCGAATTCTGGGTTTAATCCCAAGCATTCAGAACTTTTGCACAACATTGAGATGCATGAGGTTATGGGCAAATCGTCGTTGTGTTTATTCCAATGTTGCAGGATTTCTTGGTGGTATAAATTGGGCATTGCTTGTTGCTTGCATATGCCAACTTTACCTAAATGCACTTCCTAACATGCTGGTGTCTCGGTTTTTCAAGATATATACGCAGTGGCACTGGCCAAATCCGGTCATGCTCTGCATTATCGAAGCTGGGTCTCTTGGACCGCTGGTCTGGGATCCTAGAAGAAATAAAATGGACATGCTTCATTTGATGCCCATAATTACTCCAGCTTATCCCAGCATGAACTCTAACTACAGCGTGTCTCCGAGTACCAAGCGTATCCTGTTAGCGTATAAGAATTATTTACAGATAGACATCACTGCAGAAAATGATGATGACTTTAGAGCAAGGAATGGCTGGGTTGAGTCCTGTATCCGTCAATTAATGCTGAAGATTGAGAGGCACACTTGCGGCAAGTTGCAGTGTCACCCACATCCAGGGGATTTTTCAGACAAATCAAGAGGTTTTCGTAGCTCTTTCTTCATGGGCCTACAACGAAGTCAAAGAGTCCCTGCCGATGATGGCCGAAGGTACTTTGACATAAGAAGAACAATTGAGGAGTTTAAGCAAGCTGATGTCAACCGTTACACATTCCGAAAACATGGAATGGAGATCCGTGTATCGCATGTAAACCGCAGGAGCATTCCTAATTTTGTATTTCCTGGTGGGGTTCGACCTCTGCGCCCATCTAAAGTAATTTGGGGGAGAAGGCAGGGTTCAGAACCAACTATTTCTGGAGCATCTGAACCCCATAAATTTTGTGAATGCAAAACTGATTTGGATGGATCAGATGGTGGGCAGAAGAAAGAGCGGGTGGATAACAATATAGAGATTGACTCGAGGCATGCCAAGTCTTTATGTCGCTTTGGTGACGAATTTTGTGAGGCTAGCCCTTGTATCAGCAGTAATGTCAGTTCATGTTCCATAATATGTGACAGTGTGGATGCAAACAATAATAACTTGAGAAAGGCAGAAATCCCAAGAGATATTCCTTATCAGAGTGATGAGACTGAAGCTTGGTCAAGGTGCAATCCACCAATCGATAGCCTAGCTGCTGCTGCTAGTATATCAAATTCTAAAGTAGCAGAGGAGCTGGCATTGGTGAAGAAGATTGTGGCTACAGAGGAGGGTGCATCAGTTGGAACGCCAATGAACTCTAGCGATGGAGCAGCTTCTTACAATGATTCATGTGATGGGGGCGTAAAGGAACTTGTGGATGAATTCATGGCACCATCCTCAAAGGGAACCCCTTTACCACCTGTGGCGCAGAGCAAGCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0003006 GO:0003674 GO:0003824 GO:0004652 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009653 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0022414 GO:0031123 GO:0031124 GO:0031347 GO:0031348 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045824 GO:0046483 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048441 GO:0048444 GO:0048446 GO:0048449 GO:0048451 GO:0048465 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0061458 GO:0065007 GO:0070013 GO:0070566 GO:0071704 GO:0080134 GO:0090304 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1901360 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

NTP_transf_2 PAP_RNA-bind PAP_central

Protein Analysis

578

Amino Acids

64.59

Weight (kDa)

8.55

Isoelectric Point (pI)

50.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAP_NTPase	PF20750	6 - 100	1.6e-27	Poly(A) polymerase nucleotidyltransferase domain
NTP_transf_2	PF01909	17 - 76	8.7e-07	Nucleotidyltransferase domain
PAP_central	PF04928	128 - 248	1.6e-52	Poly(A) polymerase central domain
PAP_RNA-bind	PF04926	248 - 303	7.4e-06	Poly(A) polymerase predicted RNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005853)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17980 AT1G17980
fragaria_vesca	FvH4_5g16820 FvH4_5g16820 FvH4_5g16820 FvH4_5g16820
malus_domestica	MD06G1222200.v1.1 MD09G1233900.v1.1 MD14G1231300.v1.1 MD17G1263100.v1.1
prunus_persica	Prupe.5G226600_v2.0.a1 Prupe.5G226600_v2.0.a1 Prupe.5G226600_v2.0.a1
pyrus_communis	pycom06g19770 pycom14g19250 pycom17g26340
rosa_chinensis	RchiOBHm_Chr7g0179251
rosa_laevigata	RLG00000005369
rosa_multiflora	Rmu_sc0006939.1_g000005
rosa_roxburghii	Rroxscaffold_3G00274180
rosa_rugosa	Rorug06G0422700 Rorug06G0422800 Rorug06G0422800
rosa_samantha	Rh7AG022000 Rh7BG021900 Rh7CG023200 Rh7DG022500
rosa_wichuraiana	Rw7G001810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1681
AccBSI	CCGCTC	1 cut(s)	1264
AciI	CCGC	5 cut(s)	300, 617, 864, 1087, 1264
AclWI	GGATC	6 cut(s)	118, 161, 623, 636, 1060, 1246
AcoI	YGGCCR	2 cut(s)	569, 976
AcsI	RAATTY	6 cut(s)	284, 354, 1208, 1328, 1525, 1673
AcuI	CTGAAG	2 cut(s)	863, 1485
AdeI	CACNNNGTG	1 cut(s)	161
AfaI	GTAC	2 cut(s)	724, 986
AfiI	CCNNNNNNNGG	3 cut(s)	260, 358, 890
AgsI	TTSAA	4 cut(s)	64, 250, 289, 547
AhdI	GACNNNNNGTC	1 cut(s)	620
AjnI	CCWGG	2 cut(s)	889, 1114
AluBI	AGCT	9 cut(s)	208, 602, 683, 927, 1025, 1469, 1505, 1546, 1625
AluI	AGCT	9 cut(s)	208, 602, 683, 927, 1025, 1469, 1505, 1546, 1625
Alw21I	GWGCWC	1 cut(s)	268
Alw26I	GTCTC	4 cut(s)	540, 612, 720, 1454
AlwI	GGATC	6 cut(s)	118, 161, 623, 636, 1060, 1246
Ama87I	CYCGRG	1 cut(s)	1291
AoxI	GGCC	4 cut(s)	133, 569, 940, 976
ApeKI	GCWGC	4 cut(s)	1505, 1508, 1511, 1622
ApoI	RAATTY	6 cut(s)	284, 354, 1208, 1328, 1525, 1673
AseI	ATTAAT	1 cut(s)	836
AspLEI	GCGC	2 cut(s)	1137, 1720
AspS9I	GGNCC	3 cut(s)	134, 614, 940
AsuC2I	CCSGG	2 cut(s)	138, 261
AsuHPI	GGTGA	4 cut(s)	94, 872, 1334, 1567
AsuNHI	GCTAGC	1 cut(s)	1340
AvaI	CYCGRG	1 cut(s)	1291
AvaII	GGWCC	1 cut(s)	614
BaeGI	GKGCMC	1 cut(s)	261
BalI	TGGCCA	1 cut(s)	571
BamHI	GGATCC	1 cut(s)	628
BanI	GGYRCC	1 cut(s)	1681
Bbv12I	GWGCWC	1 cut(s)	268
BbvI	GCAGC	4 cut(s)	1492, 1495, 1498, 1634
BccI	CCATC	8 cut(s)	310, 968, 1147, 1229, 1238, 1610, 1640, 1693
BciT130I	CCWGG	2 cut(s)	891, 1116
BciVI	GTATCC	2 cut(s)	743, 836
BcnI	CCSGG	2 cut(s)	138, 261
BcoDI	GTCTC	4 cut(s)	540, 612, 720, 1454
BfaI	CTAG	6 cut(s)	122, 633, 1341, 1502, 1515, 1611
BfmI	CTRYAG	3 cut(s)	706, 774, 1572
BfuI	GTATCC	2 cut(s)	743, 836
BisI	GCNGC	5 cut(s)	865, 1506, 1509, 1512, 1623
BlsI	GCNGC	5 cut(s)	866, 1507, 1510, 1513, 1624
Bme1390I	CCNGG	4 cut(s)	138, 261, 891, 1116
Bme18I	GGWCC	1 cut(s)	614
BmeRI	GACNNNNNGTC	1 cut(s)	620
BmeT110I	CYCGRG	1 cut(s)	1291
BmgT120I	GGNCC	3 cut(s)	134, 614, 940
BmiI	GGNNCC	4 cut(s)	136, 630, 1683, 1699
BmrFI	CCNGG	4 cut(s)	138, 261, 891, 1116
BmrI	ACTGGG	1 cut(s)	269
BmsI	GCATC	7 cut(s)	207, 219, 392, 654, 1202, 1387, 1595
BmtI	GCTAGC	1 cut(s)	1344
BmuI	ACTGGG	1 cut(s)	269
BplI	GAGNNNNNCTC	2 cut(s)	1274, 1306
BpmI	CTGGAG	2 cut(s)	663, 1209
BpuEI	CTTGAG	2 cut(s)	219, 1435
BpuMI	CCSGG	2 cut(s)	138, 261
Bsa29I	ATCGAT	1 cut(s)	1494
BsaBI	GATNNNNATC	1 cut(s)	767
BsaI	GGTCTC	1 cut(s)	612
BsaJI	CCNNGG	2 cut(s)	136, 890
BsaWI	WCCGGW	1 cut(s)	577
Bsc4I	CCNNNNNNNGG	3 cut(s)	260, 358, 890
Bse1I	ACTGG	3 cut(s)	78, 275, 572
Bse3DI	GCAATG	1 cut(s)	476
Bse8I	GATNNNNATC	1 cut(s)	767
BseBI	CCWGG	2 cut(s)	891, 1116
BseCI	ATCGAT	1 cut(s)	1494
BseDI	CCNNGG	2 cut(s)	136, 890
BseGI	GGATG	7 cut(s)	85, 270, 886, 1240, 1402, 1675, 1685
BseJI	GATNNNNATC	1 cut(s)	767
BseLI	CCNNNNNNNGG	3 cut(s)	260, 358, 890
BseMI	GCAATG	1 cut(s)	476
BseMII	CTCAG	1 cut(s)	216
BseNI	ACTGG	3 cut(s)	78, 275, 572
BseRI	GAGGAG	3 cut(s)	1025, 1556, 1592
BseSI	GKGCMC	1 cut(s)	261
BseXI	GCAGC	4 cut(s)	1492, 1495, 1498, 1634
BseYI	CCCAGC	3 cut(s)	602, 689, 810
BshFI	GGCC	4 cut(s)	135, 571, 942, 978
BshNI	GGYRCC	1 cut(s)	1681
BshVI	ATCGAT	1 cut(s)	1494
BsiHKAI	GWGCWC	1 cut(s)	268
BsiHKCI	CYCGRG	1 cut(s)	1291
BsiSI	CCGG	3 cut(s)	138, 261, 578
BslFI	GGGAC	1 cut(s)	947
BslI	CCNNNNNNNGG	3 cut(s)	260, 358, 890
BsmAI	GTCTC	4 cut(s)	540, 612, 720, 1454
BsmFI	GGGAC	1 cut(s)	947
BsmI	GAATGC	3 cut(s)	375, 1095, 1223
BsnI	GGCC	4 cut(s)	135, 571, 942, 978
Bso31I	GGTCTC	1 cut(s)	612
BsoBI	CYCGRG	1 cut(s)	1291
Bsp1286I	GDGCHC	2 cut(s)	261, 268
Bsp143I	GATC	5 cut(s)	110, 166, 628, 1065, 1238
BspACI	CCGC	5 cut(s)	300, 617, 864, 1087, 1264
BspANI	GGCC	4 cut(s)	135, 571, 942, 978
BspCNI	CTCAG	1 cut(s)	217
BspDI	ATCGAT	1 cut(s)	1494
BspHI	TCATGA	1 cut(s)	279
BspLI	GGNNCC	4 cut(s)	136, 630, 1683, 1699
BspMAI	CTGCAG	1 cut(s)	778
BspOI	GCTAGC	1 cut(s)	1344
BspPI	GGATC	6 cut(s)	118, 161, 623, 636, 1060, 1246
BspQI	GCTCTTC	1 cut(s)	104
BspT107I	GGYRCC	1 cut(s)	1681
BspTNI	GGTCTC	1 cut(s)	612
BsrBI	CCGCTC	1 cut(s)	1264
BsrDI	GCAATG	1 cut(s)	476
BsrI	ACTGG	3 cut(s)	78, 275, 572
BssECI	CCNNGG	2 cut(s)	136, 890
BssMI	GATC	5 cut(s)	110, 166, 628, 1065, 1238
Bst2UI	CCWGG	2 cut(s)	891, 1116
Bst4CI	ACNGT	2 cut(s)	1037, 1391
Bst6I	CTCTTC	1 cut(s)	104
BstC8I	GCNNGC	7 cut(s)	206, 490, 1023, 1299, 1342, 1548, 1727
BstDEI	CTNAG	3 cut(s)	36, 225, 1731
BstF5I	GGATG	7 cut(s)	85, 270, 886, 1240, 1402, 1675, 1685
BstHHI	GCGC	2 cut(s)	1137, 1720
BstKTI	GATC	5 cut(s)	113, 169, 631, 1068, 1241
BstMAI	GTCTC	4 cut(s)	540, 612, 720, 1454
BstMBI	GATC	5 cut(s)	110, 166, 628, 1065, 1238
BstMWI	GCNNNNNNNGC	2 cut(s)	1511, 1726
BstNI	CCWGG	2 cut(s)	891, 1116
BstNSI	RCATGY	4 cut(s)	529, 655, 1082, 1301
BstSCI	CCNGG	4 cut(s)	136, 259, 889, 1114
BstSFI	CTRYAG	3 cut(s)	706, 774, 1572
BstSLI	GKGCMC	1 cut(s)	261
BstV1I	GCAGC	4 cut(s)	1492, 1495, 1498, 1634
BstX2I	RGATCY	2 cut(s)	628, 1065
BstYI	RGATCY	2 cut(s)	628, 1065
Bsu15I	ATCGAT	1 cut(s)	1494
BsuI	GTATCC	2 cut(s)	743, 836
BsuRI	GGCC	4 cut(s)	135, 571, 942, 978
BsuTUI	ATCGAT	1 cut(s)	1494
BtgZI	GCGATG	1 cut(s)	1629
BtsCI	GGATG	7 cut(s)	85, 270, 886, 1240, 1402, 1675, 1685
BtsI	GCAGTG	3 cut(s)	566, 771, 881
BtsIMutI	CAGTG	6 cut(s)	301, 565, 566, 771, 881, 1396
Cac8I	GCNNGC	7 cut(s)	206, 490, 1023, 1299, 1342, 1548, 1727
CciI	TCATGA	1 cut(s)	279
CfoI	GCGC	2 cut(s)	1137, 1720
Cfr13I	GGNCC	3 cut(s)	134, 614, 940
ClaI	ATCGAT	1 cut(s)	1494
Csp6I	GTAC	2 cut(s)	723, 985
CspCI	CAANNNNNGTGG	2 cut(s)	277, 312
CviQI	GTAC	2 cut(s)	723, 985
DdeI	CTNAG	3 cut(s)	36, 225, 1731
DpnI	GATC	5 cut(s)	112, 168, 630, 1067, 1240
DpnII	GATC	5 cut(s)	110, 166, 628, 1065, 1238
DraIII	CACNNNGTG	1 cut(s)	161
DriI	GACNNNNNGTC	1 cut(s)	620
EaeI	YGGCCR	2 cut(s)	569, 976
Eam1104I	CTCTTC	1 cut(s)	104
Eam1105I	GACNNNNNGTC	1 cut(s)	620
EarI	CTCTTC	1 cut(s)	104
Eco31I	GGTCTC	1 cut(s)	612
Eco47I	GGWCC	1 cut(s)	614
Eco57I	CTGAAG	2 cut(s)	863, 1485
Eco88I	CYCGRG	1 cut(s)	1291
EcoRI	GAATTC	2 cut(s)	354, 1673
EcoRII	CCWGG	2 cut(s)	889, 1114
EcoT22I	ATGCAT	1 cut(s)	407
FaqI	GGGAC	1 cut(s)	947
FauI	CCCGC	1 cut(s)	1257
FauNDI	CATATG	1 cut(s)	494
Fnu4HI	GCNGC	5 cut(s)	865, 1506, 1509, 1512, 1623
FokI	GGATG	7 cut(s)	92, 257, 873, 1247, 1409, 1672, 1682
Fsp4HI	GCNGC	5 cut(s)	865, 1506, 1509, 1512, 1623
FspBI	CTAG	6 cut(s)	122, 633, 1341, 1502, 1515, 1611
GlaI	GCGC	2 cut(s)	1136, 1719
GluI	GCNGC	5 cut(s)	865, 1506, 1509, 1512, 1623
GsaI	CCCAGC	3 cut(s)	606, 693, 814
GsuI	CTGGAG	2 cut(s)	663, 1209
HaeIII	GGCC	4 cut(s)	135, 571, 942, 978
HapII	CCGG	3 cut(s)	138, 261, 578
HhaI	GCGC	2 cut(s)	1137, 1720
Hin6I	GCGC	2 cut(s)	1135, 1718
HinP1I	GCGC	2 cut(s)	1135, 1718
HincII	GTYRAC	1 cut(s)	1033
HindII	GTYRAC	1 cut(s)	1033
HindIII	AAGCTT	1 cut(s)	1467
HinfI	GANTC	4 cut(s)	818, 960, 1289, 1637
HpaII	CCGG	3 cut(s)	138, 261, 578
HphI	GGTGA	4 cut(s)	94, 872, 1334, 1567
Hpy166II	GTNNAC	2 cut(s)	1033, 1084
Hpy188I	TCNGA	9 cut(s)	226, 381, 720, 904, 1049, 1174, 1198, 1243, 1452
Hpy188III	TCNNGA	6 cut(s)	25, 188, 280, 547, 912, 1188
Hpy8I	GTNNAC	2 cut(s)	1033, 1084
Hpy99I	CGWCG	1 cut(s)	429
HpyAV	CCTTC	2 cut(s)	975, 1155
HpyCH4III	ACNGT	2 cut(s)	1037, 1391
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1511, 1726
HpyF3I	CTNAG	3 cut(s)	36, 225, 1731
HspAI	GCGC	2 cut(s)	1135, 1718
Kzo9I	GATC	5 cut(s)	110, 166, 628, 1065, 1238
LguI	GCTCTTC	1 cut(s)	104
LmnI	GCTCC	5 cut(s)	140, 1092, 1190, 1543, 1619
Lsp1109I	GCAGC	4 cut(s)	1492, 1495, 1498, 1634
LweI	GCATC	7 cut(s)	207, 219, 392, 654, 1202, 1387, 1595
MaeI	CTAG	6 cut(s)	122, 633, 1341, 1502, 1515, 1611
MaeIII	GTNAC	6 cut(s)	238, 343, 878, 1037, 1322, 1385
MalI	GATC	5 cut(s)	112, 168, 630, 1067, 1240
MbiI	CCGCTC	1 cut(s)	1264
MboI	GATC	5 cut(s)	110, 166, 628, 1065, 1238
MfeI	CAATTG	1 cut(s)	1005
MflI	RGATCY	2 cut(s)	628, 1065
MhlI	GDGCHC	2 cut(s)	261, 268
MlsI	TGGCCA	1 cut(s)	571
MluNI	TGGCCA	1 cut(s)	571
MlyI	GAGTC	3 cut(s)	827, 969, 1283
MmeI	TCCRAC	1 cut(s)	1573
Mox20I	TGGCCA	1 cut(s)	571
Mph1103I	ATGCAT	1 cut(s)	407
MscI	TGGCCA	1 cut(s)	571
MseI	TTAA	4 cut(s)	330, 365, 836, 1017
MslI	CAYNNNNRTG	2 cut(s)	400, 530
Msp20I	TGGCCA	1 cut(s)	571
MspA1I	CMGCKG	1 cut(s)	619
MspI	CCGG	3 cut(s)	138, 261, 578
MspR9I	CCNGG	4 cut(s)	138, 261, 891, 1116
MunI	CAATTG	1 cut(s)	1005
Mva1269I	GAATGC	3 cut(s)	375, 1095, 1223
MvaI	CCWGG	2 cut(s)	891, 1116
MwoI	GCNNNNNNNGC	2 cut(s)	1511, 1726
NciI	CCSGG	2 cut(s)	138, 261
NdeI	CATATG	1 cut(s)	494
NdeII	GATC	5 cut(s)	110, 166, 628, 1065, 1238
NheI	GCTAGC	1 cut(s)	1340
NlaIV	GGNNCC	4 cut(s)	136, 630, 1683, 1699
NmuCI	GTSAC	4 cut(s)	238, 878, 1322, 1385
NsiI	ATGCAT	1 cut(s)	407
NspI	RCATGY	4 cut(s)	529, 655, 1082, 1301
PaeI	GCATGC	1 cut(s)	1301
PaeR7I	CTCGAG	1 cut(s)	1291
PagI	TCATGA	1 cut(s)	279
PciSI	GCTCTTC	1 cut(s)	104
PctI	GAATGC	3 cut(s)	375, 1095, 1223
PfeI	GAWTC	1 cut(s)	1637
PkrI	GCNGC	5 cut(s)	866, 1507, 1510, 1513, 1624
PleI	GAGTC	3 cut(s)	826, 968, 1283
PpsI	GAGTC	3 cut(s)	826, 968, 1283
PshBI	ATTAAT	1 cut(s)	836
Psp6I	CCWGG	2 cut(s)	889, 1114
PspFI	CCCAGC	3 cut(s)	602, 689, 810
PspGI	CCWGG	2 cut(s)	889, 1114
PspN4I	GGNNCC	4 cut(s)	136, 630, 1683, 1699
PspPI	GGNCC	3 cut(s)	134, 614, 940
PspXI	VCTCGAGB	1 cut(s)	1291
PsrI	GAACNNNNNNTAC	4 cut(s)	689, 721, 1351, 1383
PstI	CTGCAG	1 cut(s)	778
PsuI	RGATCY	2 cut(s)	628, 1065
RsaI	GTAC	2 cut(s)	724, 986
RsaNI	GTAC	2 cut(s)	723, 985
RseI	CAYNNNNRTG	2 cut(s)	400, 530
SapI	GCTCTTC	1 cut(s)	104
SaqAI	TTAA	4 cut(s)	330, 365, 836, 1017
SatI	GCNGC	5 cut(s)	865, 1506, 1509, 1512, 1623
Sau3AI	GATC	5 cut(s)	110, 166, 628, 1065, 1238
Sau96I	GGNCC	3 cut(s)	134, 614, 940
SchI	GAGTC	3 cut(s)	827, 969, 1283
ScrFI	CCNGG	4 cut(s)	138, 261, 891, 1116
SduI	GDGCHC	2 cut(s)	261, 268
SfaNI	GCATC	7 cut(s)	207, 219, 392, 654, 1202, 1387, 1595
SfcI	CTRYAG	3 cut(s)	706, 774, 1572
Sfr274I	CTCGAG	1 cut(s)	1291
SinI	GGWCC	1 cut(s)	614
SlaI	CTCGAG	1 cut(s)	1291
SmiMI	CAYNNNNRTG	2 cut(s)	400, 530
SmlI	CTYRAG	3 cut(s)	234, 1291, 1414
SmoI	CTYRAG	3 cut(s)	234, 1291, 1414
SphI	GCATGC	1 cut(s)	1301
SsiI	CCGC	5 cut(s)	300, 617, 864, 1087, 1264
SspMI	CTAG	6 cut(s)	122, 633, 1341, 1502, 1515, 1611
StyD4I	CCNGG	4 cut(s)	136, 259, 889, 1114
TaaI	ACNGT	2 cut(s)	1037, 1391
TaqI	TCGA	5 cut(s)	165, 597, 1126, 1292, 1494
TaqII	GACCGA	1 cut(s)	366
TauI	GCSGC	1 cut(s)	867
TfiI	GAWTC	1 cut(s)	1637
Tru1I	TTAA	4 cut(s)	330, 365, 836, 1017
Tru9I	TTAA	4 cut(s)	330, 365, 836, 1017
TscAI	CASTG	6 cut(s)	301, 566, 572, 778, 881, 1396
TseFI	GTSAC	4 cut(s)	238, 878, 1322, 1385
TseI	GCWGC	4 cut(s)	1505, 1508, 1511, 1622
Tsp45I	GTSAC	4 cut(s)	238, 878, 1322, 1385
TspGWI	ACGGA	2 cut(s)	818, 1058
TspRI	CASTG	6 cut(s)	301, 566, 572, 778, 881, 1396
VpaK11BI	GGWCC	1 cut(s)	614
VspI	ATTAAT	1 cut(s)	836
XapI	RAATTY	6 cut(s)	284, 354, 1208, 1328, 1525, 1673
XceI	RCATGY	4 cut(s)	529, 655, 1082, 1301
XhoI	CTCGAG	1 cut(s)	1291
XspI	CTAG	6 cut(s)	122, 633, 1341, 1502, 1515, 1611
Zsp2I	ATGCAT	1 cut(s)	407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.