Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0003367

Physical Location & Seq

Genomic Coordinates Forward (+)

15726603 .. 15730786

Gene Structure 4184 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1098200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGGCCTTCTCCGAGTTCCGGCCTCTGGACGAGAAGGTCCTCATAGAGTACATAAGGGCCACGCCTTCTCTCGCTTCTAAGCTAGGCAACAAGTTCGACAACTTAACCATCAAAGAAGTTGGCGATGGCAATCTCAACTTCGTCTTCATCGTCGTTGGTTCTTCTGGTTCTTTCGTCATCAAGCAGGCTCTTCCATATATCCGTTGTATTGGGGAGTCATGGCCAATGACAAAGGAAAGAGCATATTTTGAGGCATTGGCACTTAAAGAGCATGGAAGTTTGAGTCCTGATCATGCTCCTGAAGTCTATCATTTCGATCAGACCATGTCTTTGATAGGCATGCGCTATTTGGAACCCCCGCATATCATACTGAGAAAAGGGTTGATTGCTGGAGTTGAGTACCCCTTGCTGGCTGACCACATGTCCGACTGTATTGCAAAGACTCTGTTCTTCACATCCCTCCTGTATCACAATACCACAGACCACAAAAAAGCTCGTATGAATGTTGTTTTTTCTGACCCTTACAAAGTATCTCAATATAACCAATGGACTTCTCCTTATCTTGATTCGGATGCTGAGGCTGTGCGGGGGGATAAAGCTTTGAAGCTTGAAGTTGCTGAGTTGAAATCCTTGTTCTGTGAGAGAGCCCAAGCCCTAGTACATGGAGATCTTCACACTGGTTCTGTAATGGTGACTCATGATTCAACTCAAGTTATAGATCCAGAGTTTGCATTTTATGGACCAATGGGTTTTGATATTGGAGCTTTTCTGGGCAACTTGATTTTGGCTTTCTATGCACAAGATGGGCATGCTAATGACCAGAATGATCGAAAAGCATACAAGGCTTGGATTTTGAGGACAATTGAAAACACTTGGAACCTTTTCGACAGGAAATTCCTTGCACTATGGGATGCGAACAAAGATTCTGGCGACGCATATCTACCTGCAATTTATAACAACCCTGCGCTTTTACAGCTTGTACAAAAGAAATTTATTAAAGATCTGCTTCATGACACTCTTGGATTTGGCGCTGTGAAAATGATAAGGCGAATCCTTGGAGTTGCACATGTTGAAGATTTTGAGTCAATAGCTGATGCCAGCAAGCGGGCGGGTTGTGAGCGTCGAGCTCTTGAGTTAGCAAAGCTCCTTCTCAAGGAGAGGAAAAAATTTCAGGACATTAACGAAGTTATTTCAGCCATTCAACAACACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0000302 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006555 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009066 GO:0009067 GO:0009086 GO:0009719 GO:0009723 GO:0009725 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0019509 GO:0019752 GO:0032870 GO:0033554 GO:0034599 GO:0034614 GO:0035690 GO:0042221 GO:0042493 GO:0042802 GO:0043094 GO:0043102 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046522 GO:0050896 GO:0051716 GO:0070887 GO:0071241 GO:0071248 GO:0071265 GO:0071267 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071704 GO:0071731 GO:0071732 GO:0097366 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 map00270 map01100

Pfam Domains

Protein Families

APH

Protein Analysis

405

Amino Acids

45.71

Weight (kDa)

6.28

Isoelectric Point (pI)

33.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APH	PF01636	36 - 259	6e-11	Phosphotransferase enzyme family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49820
fragaria_vesca	FvH4_2g05040
malus_domestica	MD10G1098200.v1.1 MD10G1098700.v1.1 MD10G1147300.v1.1
prunus_persica	Prupe.7G233900_v2.0.a1 Prupe.8G136000_v2.0.a1
pyrus_communis	pycom10g08390
rosa_chinensis	RchiOBHm_Chr2g0122061 RchiOBHm_Chr6g0254911 RchiOBHm_Chr6g0254921
rosa_laevigata	RLG00000014878 RLG00000014883
rosa_multiflora	Rmu_sc0000016.1_g000011 Rmu_sc0003880.1_g000001 Rmu_sc0010925.1_g000019
rosa_roxburghii	Rroxscaffold_2G00122040 Rroxscaffold_7G00210480
rosa_rugosa	Rorug02G0236200 Rorug02G0236300 Rorug05G0555300
rosa_samantha	Rh2AG292600 Rh2BG303200 Rh2CG281700 Rh2DG316800 Rh6AG072700 Rh6BG064800 Rh6BG065000 Rh6CG063900 Rh6CG064800 Rh6DG061000 Rh6DG061800
rosa_wichuraiana	Rw0G002700 Rw2G023480 Rw6G006330 Rw6G006340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	954
AasI	GACNNNNNNGTC	1 cut(s)	35
Acc36I	ACCTGC	1 cut(s)	952
AciI	CCGC	4 cut(s)	359, 586, 1105, 1109
AclWI	GGATC	1 cut(s)	713
AcoI	YGGCCR	1 cut(s)	221
AcsI	RAATTY	3 cut(s)	893, 989, 1166
AcuI	CTGAAG	1 cut(s)	321
AfaI	GTAC	4 cut(s)	50, 401, 660, 981
AfiI	CCNNNNNNNGG	5 cut(s)	18, 25, 409, 1104, 1153
AflIII	ACRYGT	2 cut(s)	420, 1066
AgsI	TTSAA	7 cut(s)	604, 611, 625, 705, 866, 1073, 1202
AhdI	GACNNNNNGTC	1 cut(s)	421
AluBI	AGCT	9 cut(s)	82, 494, 599, 607, 764, 976, 1091, 1127, 1144
AluI	AGCT	9 cut(s)	82, 494, 599, 607, 764, 976, 1091, 1127, 1144
Alw21I	GWGCWC	1 cut(s)	1129
AlwI	GGATC	1 cut(s)	713
AoxI	GGCC	4 cut(s)	3, 20, 57, 221
ApoI	RAATTY	3 cut(s)	893, 989, 1166
ArsI	GACNNNNNNTTYG	2 cut(s)	313, 345
Asp700I	GAANNNNTTC	1 cut(s)	881
AspLEI	GCGC	3 cut(s)	345, 967, 1031
AspS9I	GGNCC	3 cut(s)	37, 57, 740
AsuHPI	GGTGA	1 cut(s)	703
AvaII	GGWCC	2 cut(s)	37, 740
BalI	TGGCCA	1 cut(s)	223
BanII	GRGCYC	2 cut(s)	649, 1129
BbsI	GAAGAC	1 cut(s)	136
Bbv12I	GWGCWC	1 cut(s)	1129
BbvCI	CCTCAGC	1 cut(s)	576
BccI	CCATC	3 cut(s)	116, 119, 797
BcgI	CGANNNNNNTGC	4 cut(s)	76, 110, 416, 450
BclI	TGATCA	1 cut(s)	289
BfaI	CTAG	2 cut(s)	83, 656
BfoI	RGCGCY	1 cut(s)	1032
BfuAI	ACCTGC	1 cut(s)	952
BglII	AGATCT	2 cut(s)	667, 1000
Bme18I	GGWCC	2 cut(s)	37, 740
BmeRI	GACNNNNNGTC	1 cut(s)	421
BmgT120I	GGNCC	3 cut(s)	37, 57, 740
BmiI	GGNNCC	2 cut(s)	354, 878
BmsI	GCATC	3 cut(s)	562, 901, 1084
BpiI	GAAGAC	1 cut(s)	136
BpmI	CTGGAG	1 cut(s)	411
Bpu10I	CCTNAGC	1 cut(s)	576
BpuEI	CTTGAG	3 cut(s)	693, 1136, 1151
BsaBI	GATNNNNATC	1 cut(s)	129
BsaJI	CCNNGG	1 cut(s)	1054
Bsc4I	CCNNNNNNNGG	5 cut(s)	18, 25, 409, 1104, 1153
Bse1I	ACTGG	2 cut(s)	682, 1210
Bse8I	GATNNNNATC	1 cut(s)	129
BseDI	CCNNGG	1 cut(s)	1054
BseGI	GGATG	3 cut(s)	455, 577, 916
BseJI	GATNNNNATC	1 cut(s)	129
BseLI	CCNNNNNNNGG	5 cut(s)	18, 25, 409, 1104, 1153
BseMII	CTCAG	3 cut(s)	362, 567, 609
BseNI	ACTGG	2 cut(s)	682, 1210
BshFI	GGCC	4 cut(s)	5, 22, 59, 223
BsiHKAI	GWGCWC	1 cut(s)	1129
BsiSI	CCGG	1 cut(s)	19
BslI	CCNNNNNNNGG	5 cut(s)	18, 25, 409, 1104, 1153
BsnI	GGCC	4 cut(s)	5, 22, 59, 223
Bsp1286I	GDGCHC	2 cut(s)	649, 1129
Bsp1407I	TGTACA	1 cut(s)	979
Bsp143I	GATC	6 cut(s)	289, 316, 667, 718, 826, 1000
BspACI	CCGC	4 cut(s)	359, 586, 1105, 1109
BspANI	GGCC	4 cut(s)	5, 22, 59, 223
BspCNI	CTCAG	3 cut(s)	363, 568, 610
BspHI	TCATGA	2 cut(s)	697, 1009
BspLI	GGNNCC	2 cut(s)	354, 878
BspMI	ACCTGC	1 cut(s)	952
BspPI	GGATC	1 cut(s)	713
BspQI	GCTCTTC	1 cut(s)	195
BsrGI	TGTACA	1 cut(s)	979
BsrI	ACTGG	2 cut(s)	682, 1210
BssECI	CCNNGG	1 cut(s)	1054
BssMI	GATC	6 cut(s)	289, 316, 667, 718, 826, 1000
BssT1I	CCWWGG	1 cut(s)	1054
Bst4CI	ACNGT	1 cut(s)	431
Bst6I	CTCTTC	1 cut(s)	195
BstAUI	TGTACA	1 cut(s)	979
BstC8I	GCNNGC	7 cut(s)	186, 341, 411, 810, 1099, 1103, 1107
BstDEI	CTNAG	4 cut(s)	78, 371, 576, 618
BstENI	CCTNNNNNAGG	1 cut(s)	1151
BstF5I	GGATG	3 cut(s)	455, 577, 916
BstH2I	RGCGCY	1 cut(s)	1032
BstHHI	GCGC	3 cut(s)	345, 967, 1031
BstKTI	GATC	6 cut(s)	292, 319, 670, 721, 829, 1003
BstMBI	GATC	6 cut(s)	289, 316, 667, 718, 826, 1000
BstMWI	GCNNNNNNNGC	3 cut(s)	794, 842, 973
BstNSI	RCATGY	4 cut(s)	343, 424, 812, 1070
BstV2I	GAAGAC	1 cut(s)	136
BstX2I	RGATCY	3 cut(s)	667, 718, 1000
BstYI	RGATCY	3 cut(s)	667, 718, 1000
BsuRI	GGCC	4 cut(s)	5, 22, 59, 223
BtgZI	GCGATG	1 cut(s)	138
BtsCI	GGATG	3 cut(s)	455, 577, 916
BtsIMutI	CAGTG	1 cut(s)	675
BveI	ACCTGC	1 cut(s)	952
Cac8I	GCNNGC	7 cut(s)	186, 341, 411, 810, 1099, 1103, 1107
CciI	TCATGA	2 cut(s)	697, 1009
CfoI	GCGC	3 cut(s)	345, 967, 1031
Cfr13I	GGNCC	3 cut(s)	37, 57, 740
CseI	GACGC	2 cut(s)	941, 1109
Csp6I	GTAC	4 cut(s)	49, 400, 659, 980
CviQI	GTAC	4 cut(s)	49, 400, 659, 980
DdeI	CTNAG	4 cut(s)	78, 371, 576, 618
DpnI	GATC	6 cut(s)	291, 318, 669, 720, 828, 1002
DpnII	GATC	6 cut(s)	289, 316, 667, 718, 826, 1000
DrdI	GACNNNNNNGTC	1 cut(s)	35
DriI	GACNNNNNGTC	1 cut(s)	421
DseDI	GACNNNNNNGTC	1 cut(s)	35
EaeI	YGGCCR	1 cut(s)	221
Eam1104I	CTCTTC	1 cut(s)	195
Eam1105I	GACNNNNNGTC	1 cut(s)	421
EarI	CTCTTC	1 cut(s)	195
Ecl136II	GAGCTC	1 cut(s)	1127
Eco130I	CCWWGG	1 cut(s)	1054
Eco24I	GRGCYC	2 cut(s)	649, 1129
Eco47I	GGWCC	2 cut(s)	37, 740
Eco53kI	GAGCTC	1 cut(s)	1127
Eco57I	CTGAAG	1 cut(s)	321
EcoICRI	GAGCTC	1 cut(s)	1127
EcoNI	CCTNNNNNAGG	1 cut(s)	1151
EcoO109I	RGGNCCY	1 cut(s)	37
EcoT14I	CCWWGG	1 cut(s)	1054
EcoT38I	GRGCYC	2 cut(s)	649, 1129
ErhI	CCWWGG	1 cut(s)	1054
FalI	AAGNNNNNCTT	2 cut(s)	990, 1022
FauI	CCCGC	4 cut(s)	366, 579, 1098, 1102
FbaI	TGATCA	1 cut(s)	289
FokI	GGATG	3 cut(s)	442, 584, 923
FriOI	GRGCYC	2 cut(s)	649, 1129
FspBI	CTAG	2 cut(s)	83, 656
GlaI	GCGC	3 cut(s)	344, 966, 1030
GsuI	CTGGAG	1 cut(s)	411
HaeII	RGCGCY	1 cut(s)	1032
HaeIII	GGCC	4 cut(s)	5, 22, 59, 223
HapII	CCGG	1 cut(s)	19
HgaI	GACGC	2 cut(s)	941, 1109
HhaI	GCGC	3 cut(s)	345, 967, 1031
Hin6I	GCGC	3 cut(s)	343, 965, 1029
HinP1I	GCGC	3 cut(s)	343, 965, 1029
HindIII	AAGCTT	2 cut(s)	597, 605
HinfI	GANTC	9 cut(s)	215, 283, 442, 566, 694, 701, 923, 1050, 1082
HpaII	CCGG	1 cut(s)	19
HphI	GGTGA	1 cut(s)	703
Hpy188I	TCNGA	5 cut(s)	13, 321, 427, 517, 571
Hpy188III	TCNNGA	9 cut(s)	26, 287, 299, 563, 698, 722, 1010, 1130, 1172
Hpy99I	CGWCG	3 cut(s)	155, 935, 1125
HpyAV	CCTTC	4 cut(s)	16, 28, 75, 1157
HpyCH4III	ACNGT	1 cut(s)	431
HpyCH4V	TGCA	6 cut(s)	437, 731, 797, 902, 947, 1064
HpyF10VI	GCNNNNNNNGC	3 cut(s)	794, 842, 973
HpyF3I	CTNAG	4 cut(s)	78, 371, 576, 618
HspAI	GCGC	3 cut(s)	343, 965, 1029
Ksp22I	TGATCA	1 cut(s)	289
Kzo9I	GATC	6 cut(s)	289, 316, 667, 718, 826, 1000
LguI	GCTCTTC	1 cut(s)	195
LmnI	GCTCC	3 cut(s)	301, 761, 1149
LweI	GCATC	3 cut(s)	562, 901, 1084
MaeI	CTAG	2 cut(s)	83, 656
MaeIII	GTNAC	1 cut(s)	691
MalI	GATC	6 cut(s)	291, 318, 669, 720, 828, 1002
MboI	GATC	6 cut(s)	289, 316, 667, 718, 826, 1000
MboII	GAAGA	6 cut(s)	136, 153, 182, 442, 662, 1085
MfeI	CAATTG	1 cut(s)	861
MflI	RGATCY	3 cut(s)	667, 718, 1000
MhlI	GDGCHC	2 cut(s)	649, 1129
MlsI	TGGCCA	1 cut(s)	223
MluCI	AATT	5 cut(s)	861, 893, 948, 989, 1166
MluNI	TGGCCA	1 cut(s)	223
MlyI	GAGTC	5 cut(s)	224, 292, 436, 688, 1091
MmeI	TCCRAC	1 cut(s)	450
MnlI	CCTC	7 cut(s)	33, 50, 244, 470, 571, 849, 1152
Mox20I	TGGCCA	1 cut(s)	223
MroXI	GAANNNNTTC	1 cut(s)	881
MscI	TGGCCA	1 cut(s)	223
MseI	TTAA	4 cut(s)	104, 264, 996, 1179
MslI	CAYNNNNRTG	1 cut(s)	813
Msp20I	TGGCCA	1 cut(s)	223
MspI	CCGG	1 cut(s)	19
MunI	CAATTG	1 cut(s)	861
MwoI	GCNNNNNNNGC	3 cut(s)	794, 842, 973
NdeII	GATC	6 cut(s)	289, 316, 667, 718, 826, 1000
NlaIV	GGNNCC	2 cut(s)	354, 878
NmuCI	GTSAC	1 cut(s)	691
NspI	RCATGY	4 cut(s)	343, 424, 812, 1070
PaeI	GCATGC	2 cut(s)	343, 812
PagI	TCATGA	2 cut(s)	697, 1009
PciI	ACATGT	2 cut(s)	420, 1066
PciSI	GCTCTTC	1 cut(s)	195
PcsI	WCGNNNNNNNCGW	1 cut(s)	147
PdmI	GAANNNNTTC	1 cut(s)	881
PfeI	GAWTC	4 cut(s)	566, 701, 923, 1050
PflFI	GACNNNGTC	1 cut(s)	325
PleI	GAGTC	5 cut(s)	223, 291, 436, 688, 1090
PpsI	GAGTC	5 cut(s)	223, 291, 436, 688, 1090
PpuMI	RGGWCCY	1 cut(s)	37
PscI	ACATGT	2 cut(s)	420, 1066
PsiI	TTATAA	1 cut(s)	954
Psp124BI	GAGCTC	1 cut(s)	1129
Psp5II	RGGWCCY	1 cut(s)	37
PspN4I	GGNNCC	2 cut(s)	354, 878
PspPI	GGNCC	3 cut(s)	37, 57, 740
PspPPI	RGGWCCY	1 cut(s)	37
PsuI	RGATCY	3 cut(s)	667, 718, 1000
PsyI	GACNNNGTC	1 cut(s)	325
RsaI	GTAC	4 cut(s)	50, 401, 660, 981
RsaNI	GTAC	4 cut(s)	49, 400, 659, 980
RseI	CAYNNNNRTG	1 cut(s)	813
SacI	GAGCTC	1 cut(s)	1129
SapI	GCTCTTC	1 cut(s)	195
SaqAI	TTAA	4 cut(s)	104, 264, 996, 1179
Sau3AI	GATC	6 cut(s)	289, 316, 667, 718, 826, 1000
Sau96I	GGNCC	3 cut(s)	37, 57, 740
SchI	GAGTC	5 cut(s)	224, 292, 436, 688, 1091
SduI	GDGCHC	2 cut(s)	649, 1129
SfaNI	GCATC	3 cut(s)	562, 901, 1084
SinI	GGWCC	2 cut(s)	37, 740
SmiMI	CAYNNNNRTG	1 cut(s)	813
SmlI	CTYRAG	3 cut(s)	708, 1130, 1151
SmoI	CTYRAG	3 cut(s)	708, 1130, 1151
SphI	GCATGC	2 cut(s)	343, 812
Sse9I	AATT	5 cut(s)	861, 893, 948, 989, 1166
SsiI	CCGC	4 cut(s)	359, 586, 1105, 1109
SspMI	CTAG	2 cut(s)	83, 656
SstI	GAGCTC	1 cut(s)	1129
StyI	CCWWGG	1 cut(s)	1054
TaaI	ACNGT	1 cut(s)	431
TaqI	TCGA	5 cut(s)	96, 315, 829, 885, 1123
TasI	AATT	5 cut(s)	861, 893, 948, 989, 1166
TatI	WGTACW	3 cut(s)	48, 658, 979
TfiI	GAWTC	4 cut(s)	566, 701, 923, 1050
Tru1I	TTAA	4 cut(s)	104, 264, 996, 1179
Tru9I	TTAA	4 cut(s)	104, 264, 996, 1179
TscAI	CASTG	1 cut(s)	682
TseFI	GTSAC	1 cut(s)	691
Tsp45I	GTSAC	1 cut(s)	691
TspDTI	ATGAA	3 cut(s)	136, 515, 998
TspGWI	ACGGA	1 cut(s)	191
TspRI	CASTG	1 cut(s)	682
Tth111I	GACNNNGTC	1 cut(s)	325
VpaK11BI	GGWCC	2 cut(s)	37, 740
XagI	CCTNNNNNAGG	1 cut(s)	1151
XapI	RAATTY	3 cut(s)	893, 989, 1166
XceI	RCATGY	4 cut(s)	343, 424, 812, 1070
XmnI	GAANNNNTTC	1 cut(s)	881
XspI	CTAG	2 cut(s)	83, 656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.