Prupe.8G136000_v2.0.a1

Methylthioribose kinase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
15639558 .. 15645010
5453 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G136000.1

Sequence Viewer

Length: 1254 bp
ATGGCCTTCTCTGAGTTTCGCCCACTGGACGAGAAGGTCCTCATAGAATACATAAAGGCCACACCTTCTCTCTCTTCTAAGCTCAACAACAAGTTTGACAACTTAACAATCAAAGAAGTGGGTGATGGCAACCTCAATTTCGTCTTCATCGTCGTTGGCTCCACTGGTTCTTTCGTCATCAAGCAGGCTCTTCCATATATTCGTTGTATTGGGGAGTCATGGCCAATGACAAAGGAAAGGGCATATTTTGAGGCATTGGCACTGAGAGAGCATGGTGGTTTAAGTCCTGATCATGTCCCTGAAGTTTATCATTTTGATCGGACCATGTCTTTGATTGGCATGCGCTATTTGGAGCCTCCACATATCATACTGAGAAAAGGATTGATTGCTGGAATTGAGTACCCCTTGCTGGCGGACCACATGTCGGACTATATTGCAAGGACTCTGTTCTTCACATCCCTCCTTTATCGTAATACCACGGACCACAAACGAGCTGTTGCTGAATTTTGTGGCAATGTGGAGTTATGCAGGCTTACTGAGCAGGTTGTTTTTTCTGATCCATACAAAATATCTCAATATAACCACTGGACTTCTCCTTATCTTGATTCTGACGCTGAGGCTATACGGGAGGATAATGCTTTGAAGCTTGAAGTTGCTGAGTTGAAATCTTTGTTCTGTGAGAGAGCCCAAGCCCTAATACATGGAGATCTTCACACTGGTTCTGTAATGGTGACTCATGATTCAACTCAAGTTATAGATCCAGAATTTGCATATTATGGACCAATGGGTTTTGATATTGGCGCTTTTCTGGGTAACTTGATTTTGGCTTTCTTTGCACAAGATGGGCATGCTGATGAGCAGAATGATCGAAAAGCATACAAGGATTGGATTTTGAGGACAATTGAAAACACTTGGAACCTTTTCGACAGAAAATTCGTTGCACTGTGGGATACAAACAATGATTCTGGTGACGCATATCTTCCTGCGATTTATAACAACCCTGGGCTTCTACAGCTTGTACAAAAGAAATATATTAAAGATCTGCTTCATGACTCCCTTGGTTTTGGTGCTGCGAAAATGATAAGGAGAATTGTTGGTGTTGCACATGTTGAAGATTTTGAATCAATCGCCGATGCTAGCAAACGGGCAGGTTGTGAGCGTCGGGCTCTTGAGGTTGCAAAGTTGCTTCTTAAGGAGAGGAGAAAGTTTCAGGGCATTGCTGAAGTTATTTCAGCCATTCAACAAGTCCAGTAA

Protein Analysis

418

Amino Acids

47.36

Weight (kDa)

5.75

Isoelectric Point (pI)

32.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 993
AasI GACNNNNNNGTC 1 cut(s) 35
Acc36I ACCTGC 2 cut(s) 532, 1139
AciI CCGC 1 cut(s) 413
AclWI GGATC 2 cut(s) 551, 752
AcoI YGGCCR 1 cut(s) 221
AcsI RAATTY 3 cut(s) 503, 764, 932
AcuI CTGAAG 2 cut(s) 321, 1242
AfaI GTAC 2 cut(s) 401, 1020
AfiI CCNNNNNNNGG 2 cut(s) 409, 424
AflII CTTAAG 1 cut(s) 1190
AflIII ACRYGT 2 cut(s) 420, 1105
AgsI TTSAA 8 cut(s) 643, 650, 664, 744, 905, 1112, 1121, 1241
AhdI GACNNNNNGTC 1 cut(s) 421
AjnI CCWGG 1 cut(s) 1000
AluBI AGCT 4 cut(s) 82, 494, 646, 1015
AluI AGCT 4 cut(s) 82, 494, 646, 1015
AlwI GGATC 2 cut(s) 551, 752
AoxI GGCC 3 cut(s) 3, 57, 221
ApeKI GCWGC 1 cut(s) 1070
ApoI RAATTY 3 cut(s) 503, 764, 932
ArsI GACNNNNNNTTYG 4 cut(s) 313, 345, 917, 949
Asp700I GAANNNNTTC 1 cut(s) 920
AspLEI GCGC 2 cut(s) 345, 803
AspS9I GGNCC 5 cut(s) 37, 321, 415, 481, 779
AsuHPI GGTGA 3 cut(s) 134, 742, 980
AsuNHI GCTAGC 1 cut(s) 1136
AvaII GGWCC 5 cut(s) 37, 321, 415, 481, 779
BalI TGGCCA 1 cut(s) 223
BanII GRGCYC 2 cut(s) 688, 1168
BbsI GAAGAC 1 cut(s) 136
BbvCI CCTCAGC 1 cut(s) 615
BbvI GCAGC 1 cut(s) 1057
BccI CCATC 2 cut(s) 119, 836
BcgI CGANNNNNNTGC 2 cut(s) 848, 882
BciT130I CCWGG 1 cut(s) 1002
BciVI GTATCC 1 cut(s) 943
BclI TGATCA 1 cut(s) 289
BfaI CTAG 1 cut(s) 1137
BfmI CTRYAG 1 cut(s) 1010
BfoI RGCGCY 1 cut(s) 804
BfrI CTTAAG 1 cut(s) 1190
BfuAI ACCTGC 2 cut(s) 532, 1139
BfuI GTATCC 1 cut(s) 943
BglII AGATCT 2 cut(s) 706, 1039
BisI GCNGC 1 cut(s) 1071
BlsI GCNGC 1 cut(s) 1072
Bme1390I CCNGG 1 cut(s) 1002
Bme18I GGWCC 5 cut(s) 37, 321, 415, 481, 779
BmeRI GACNNNNNGTC 1 cut(s) 421
BmgT120I GGNCC 5 cut(s) 37, 321, 415, 481, 779
BmiI GGNNCC 3 cut(s) 160, 354, 917
BmrFI CCNGG 1 cut(s) 1002
BmsI GCATC 1 cut(s) 1123
BmtI GCTAGC 1 cut(s) 1140
BpiI GAAGAC 1 cut(s) 136
Bpu10I CCTNAGC 1 cut(s) 615
BpuEI CTTGAG 2 cut(s) 732, 1190
BsaJI CCNNGG 4 cut(s) 477, 1000, 1001, 1057
Bsc4I CCNNNNNNNGG 2 cut(s) 409, 424
Bse1I ACTGG 5 cut(s) 30, 169, 590, 721, 1249
Bse3DI GCAATG 2 cut(s) 520, 1215
BseBI CCWGG 1 cut(s) 1002
BseDI CCNNGG 4 cut(s) 477, 1000, 1001, 1057
BseGI GGATG 1 cut(s) 455
BseLI CCNNNNNNNGG 2 cut(s) 409, 424
BseMI GCAATG 2 cut(s) 520, 1215
BseMII CTCAG 5 cut(s) 254, 362, 528, 606, 648
BseNI ACTGG 5 cut(s) 30, 169, 590, 721, 1249
BseRI GAGGAG 1 cut(s) 1213
BseXI GCAGC 1 cut(s) 1057
BshFI GGCC 3 cut(s) 5, 59, 223
BslFI GGGAC 1 cut(s) 281
BslI CCNNNNNNNGG 2 cut(s) 409, 424
BsmFI GGGAC 1 cut(s) 281
BsnI GGCC 3 cut(s) 5, 59, 223
Bsp1286I GDGCHC 2 cut(s) 688, 1168
Bsp1407I TGTACA 1 cut(s) 1018
Bsp143I GATC 7 cut(s) 289, 316, 556, 706, 757, 865, 1039
BspACI CCGC 1 cut(s) 413
BspANI GGCC 3 cut(s) 5, 59, 223
BspCNI CTCAG 6 cut(s) 4, 255, 363, 529, 607, 649
BspHI TCATGA 2 cut(s) 736, 1048
BspLI GGNNCC 3 cut(s) 160, 354, 917
BspMI ACCTGC 2 cut(s) 532, 1139
BspOI GCTAGC 1 cut(s) 1140
BspPI GGATC 2 cut(s) 551, 752
BspQI GCTCTTC 1 cut(s) 195
BspTI CTTAAG 1 cut(s) 1190
BsrDI GCAATG 2 cut(s) 520, 1215
BsrGI TGTACA 1 cut(s) 1018
BsrI ACTGG 5 cut(s) 30, 169, 590, 721, 1249
BssECI CCNNGG 4 cut(s) 477, 1000, 1001, 1057
BssMI GATC 7 cut(s) 289, 316, 556, 706, 757, 865, 1039
BssT1I CCWWGG 1 cut(s) 1057
Bst2UI CCWGG 1 cut(s) 1002
Bst4CI ACNGT 1 cut(s) 945
Bst6I CTCTTC 2 cut(s) 79, 195
BstAFI CTTAAG 1 cut(s) 1190
BstAUI TGTACA 1 cut(s) 1018
BstC8I GCNNGC 6 cut(s) 186, 341, 411, 530, 849, 1138
BstDEI CTNAG 7 cut(s) 12, 78, 263, 371, 537, 615, 657
BstDSI CCRYGG 1 cut(s) 477
BstF5I GGATG 1 cut(s) 455
BstH2I RGCGCY 1 cut(s) 804
BstHHI GCGC 2 cut(s) 345, 803
BstKTI GATC 7 cut(s) 292, 319, 559, 709, 760, 868, 1042
BstMBI GATC 7 cut(s) 289, 316, 556, 706, 757, 865, 1039
BstMWI GCNNNNNNNGC 3 cut(s) 538, 833, 1012
BstNI CCWGG 1 cut(s) 1002
BstNSI RCATGY 4 cut(s) 343, 424, 851, 1109
BstSCI CCNGG 1 cut(s) 1000
BstSFI CTRYAG 1 cut(s) 1010
BstV1I GCAGC 1 cut(s) 1057
BstV2I GAAGAC 1 cut(s) 136
BstX2I RGATCY 3 cut(s) 706, 757, 1039
BstYI RGATCY 3 cut(s) 706, 757, 1039
BsuI GTATCC 1 cut(s) 943
BsuRI GGCC 3 cut(s) 5, 59, 223
BtgI CCRYGG 1 cut(s) 477
BtsCI GGATG 1 cut(s) 455
BtsIMutI CAGTG 6 cut(s) 23, 162, 260, 583, 714, 941
BveI ACCTGC 2 cut(s) 532, 1139
Cac8I GCNNGC 6 cut(s) 186, 341, 411, 530, 849, 1138
CciI TCATGA 2 cut(s) 736, 1048
CfoI GCGC 2 cut(s) 345, 803
Cfr13I GGNCC 5 cut(s) 37, 321, 415, 481, 779
CseI GACGC 3 cut(s) 620, 980, 1148
Csp6I GTAC 2 cut(s) 400, 1019
CviQI GTAC 2 cut(s) 400, 1019
DdeI CTNAG 7 cut(s) 12, 78, 263, 371, 537, 615, 657
DpnI GATC 7 cut(s) 291, 318, 558, 708, 759, 867, 1041
DpnII GATC 7 cut(s) 289, 316, 556, 706, 757, 865, 1039
DrdI GACNNNNNNGTC 1 cut(s) 35
DriI GACNNNNNGTC 1 cut(s) 421
DseDI GACNNNNNNGTC 1 cut(s) 35
EaeI YGGCCR 1 cut(s) 221
Eam1104I CTCTTC 2 cut(s) 79, 195
Eam1105I GACNNNNNGTC 1 cut(s) 421
EarI CTCTTC 2 cut(s) 79, 195
EciI GGCGGA 1 cut(s) 428
Eco130I CCWWGG 1 cut(s) 1057
Eco24I GRGCYC 2 cut(s) 688, 1168
Eco47I GGWCC 5 cut(s) 37, 321, 415, 481, 779
Eco57I CTGAAG 2 cut(s) 321, 1242
EcoO109I RGGNCCY 1 cut(s) 37
EcoRII CCWGG 1 cut(s) 1000
EcoT14I CCWWGG 1 cut(s) 1057
EcoT38I GRGCYC 2 cut(s) 688, 1168
ErhI CCWWGG 1 cut(s) 1057
FalI AAGNNNNNCTT 2 cut(s) 1029, 1061
FaqI GGGAC 1 cut(s) 281
FbaI TGATCA 1 cut(s) 289
Fnu4HI GCNGC 1 cut(s) 1071
FokI GGATG 1 cut(s) 442
FriOI GRGCYC 2 cut(s) 688, 1168
Fsp4HI GCNGC 1 cut(s) 1071
FspBI CTAG 1 cut(s) 1137
GlaI GCGC 2 cut(s) 344, 802
GluI GCNGC 1 cut(s) 1071
HaeII RGCGCY 1 cut(s) 804
HaeIII GGCC 3 cut(s) 5, 59, 223
HgaI GACGC 3 cut(s) 620, 980, 1148
HhaI GCGC 2 cut(s) 345, 803
Hin6I GCGC 2 cut(s) 343, 801
HinP1I GCGC 2 cut(s) 343, 801
HindIII AAGCTT 1 cut(s) 644
HinfI GANTC 8 cut(s) 215, 442, 605, 733, 740, 962, 1052, 1121
HphI GGTGA 3 cut(s) 134, 742, 980
Hpy188I TCNGA 5 cut(s) 13, 321, 427, 556, 610
Hpy188III TCNNGA 6 cut(s) 287, 602, 737, 761, 1049, 1169
Hpy99I CGWCG 2 cut(s) 155, 1164
HpyAV CCTTC 3 cut(s) 16, 28, 75
HpyCH4III ACNGT 1 cut(s) 945
HpyCH4V TGCA 7 cut(s) 437, 528, 770, 836, 941, 1103, 1178
HpyF10VI GCNNNNNNNGC 3 cut(s) 538, 833, 1012
HpyF3I CTNAG 7 cut(s) 12, 78, 263, 371, 537, 615, 657
HspAI GCGC 2 cut(s) 343, 801
Ksp22I TGATCA 1 cut(s) 289
Kzo9I GATC 7 cut(s) 289, 316, 556, 706, 757, 865, 1039
LguI GCTCTTC 1 cut(s) 195
LmnI GCTCC 2 cut(s) 164, 352
Lsp1109I GCAGC 1 cut(s) 1057
LweI GCATC 1 cut(s) 1123
MaeI CTAG 1 cut(s) 1137
MaeIII GTNAC 3 cut(s) 730, 812, 968
MalI GATC 7 cut(s) 291, 318, 558, 708, 759, 867, 1041
MboI GATC 7 cut(s) 289, 316, 556, 706, 757, 865, 1039
MboII GAAGA 7 cut(s) 66, 136, 182, 442, 701, 971, 1124
MfeI CAATTG 1 cut(s) 900
MflI RGATCY 3 cut(s) 706, 757, 1039
MhlI GDGCHC 2 cut(s) 688, 1168
MlsI TGGCCA 1 cut(s) 223
MluCI AATT 7 cut(s) 136, 393, 503, 764, 900, 932, 1089
MluNI TGGCCA 1 cut(s) 223
MlyI GAGTC 4 cut(s) 224, 436, 727, 1046
MmeI TCCRAC 1 cut(s) 405
Mox20I TGGCCA 1 cut(s) 223
MroXI GAANNNNTTC 1 cut(s) 920
MscI TGGCCA 1 cut(s) 223
MseI TTAA 4 cut(s) 104, 281, 1035, 1191
MslI CAYNNNNRTG 1 cut(s) 852
Msp20I TGGCCA 1 cut(s) 223
MspCI CTTAAG 1 cut(s) 1190
MspR9I CCNGG 1 cut(s) 1002
MunI CAATTG 1 cut(s) 900
MvaI CCWGG 1 cut(s) 1002
MwoI GCNNNNNNNGC 3 cut(s) 538, 833, 1012
NdeII GATC 7 cut(s) 289, 316, 556, 706, 757, 865, 1039
NheI GCTAGC 1 cut(s) 1136
NlaIV GGNNCC 3 cut(s) 160, 354, 917
NmuCI GTSAC 2 cut(s) 730, 968
NspI RCATGY 4 cut(s) 343, 424, 851, 1109
PaeI GCATGC 2 cut(s) 343, 851
PagI TCATGA 2 cut(s) 736, 1048
PasI CCCWGGG 1 cut(s) 1001
PciI ACATGT 2 cut(s) 420, 1105
PciSI GCTCTTC 1 cut(s) 195
PcsI WCGNNNNNNNCGW 1 cut(s) 147
PdmI GAANNNNTTC 1 cut(s) 920
PfeI GAWTC 4 cut(s) 605, 740, 962, 1121
PflFI GACNNNGTC 1 cut(s) 325
PkrI GCNGC 1 cut(s) 1072
PleI GAGTC 4 cut(s) 223, 436, 727, 1046
PpsI GAGTC 4 cut(s) 223, 436, 727, 1046
PpuMI RGGWCCY 1 cut(s) 37
PscI ACATGT 2 cut(s) 420, 1105
PsiI TTATAA 1 cut(s) 993
Psp5II RGGWCCY 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 1000
PspGI CCWGG 1 cut(s) 1000
PspN4I GGNNCC 3 cut(s) 160, 354, 917
PspPI GGNCC 5 cut(s) 37, 321, 415, 481, 779
PspPPI RGGWCCY 1 cut(s) 37
PsuI RGATCY 3 cut(s) 706, 757, 1039
PsyI GACNNNGTC 1 cut(s) 325
RsaI GTAC 2 cut(s) 401, 1020
RsaNI GTAC 2 cut(s) 400, 1019
RseI CAYNNNNRTG 1 cut(s) 852
SapI GCTCTTC 1 cut(s) 195
SaqAI TTAA 4 cut(s) 104, 281, 1035, 1191
SatI GCNGC 1 cut(s) 1071
Sau3AI GATC 7 cut(s) 289, 316, 556, 706, 757, 865, 1039
Sau96I GGNCC 5 cut(s) 37, 321, 415, 481, 779
SchI GAGTC 4 cut(s) 224, 436, 727, 1046
ScrFI CCNGG 1 cut(s) 1002
SduI GDGCHC 2 cut(s) 688, 1168
SfaNI GCATC 1 cut(s) 1123
SfcI CTRYAG 1 cut(s) 1010
SinI GGWCC 5 cut(s) 37, 321, 415, 481, 779
SmiMI CAYNNNNRTG 1 cut(s) 852
SmlI CTYRAG 3 cut(s) 747, 1169, 1190
SmoI CTYRAG 3 cut(s) 747, 1169, 1190
SphI GCATGC 2 cut(s) 343, 851
Sse9I AATT 7 cut(s) 136, 393, 503, 764, 900, 932, 1089
SsiI CCGC 1 cut(s) 413
SspMI CTAG 1 cut(s) 1137
StyD4I CCNGG 1 cut(s) 1000
StyI CCWWGG 1 cut(s) 1057
TaaI ACNGT 1 cut(s) 945
TaqI TCGA 2 cut(s) 868, 924
TasI AATT 7 cut(s) 136, 393, 503, 764, 900, 932, 1089
TatI WGTACW 1 cut(s) 1018
TfiI GAWTC 4 cut(s) 605, 740, 962, 1121
Tru1I TTAA 4 cut(s) 104, 281, 1035, 1191
Tru9I TTAA 4 cut(s) 104, 281, 1035, 1191
TscAI CASTG 6 cut(s) 30, 169, 267, 590, 721, 948
TseFI GTSAC 2 cut(s) 730, 968
TseI GCWGC 1 cut(s) 1070
Tsp45I GTSAC 2 cut(s) 730, 968
TspDTI ATGAA 2 cut(s) 136, 1037
TspGWI ACGGA 1 cut(s) 494
TspRI CASTG 6 cut(s) 30, 169, 267, 590, 721, 948
Tth111I GACNNNGTC 1 cut(s) 325
Vha464I CTTAAG 1 cut(s) 1190
VpaK11BI GGWCC 5 cut(s) 37, 321, 415, 481, 779
XapI RAATTY 3 cut(s) 503, 764, 932
XceI RCATGY 4 cut(s) 343, 424, 851, 1109
XmnI GAANNNNTTC 1 cut(s) 920
XspI CTAG 1 cut(s) 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.